Homology
BLAST of Cp4.1LG01g23300 vs. ExPASy Swiss-Prot
Match:
Q9FND8 (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX=3702 GN=At5g40400 PE=2 SV=1)
HSP 1 Score: 603.6 bits (1555), Expect = 2.6e-171
Identity = 301/594 (50.67%), Postives = 417/594 (70.20%), Query Frame = 0
Query: 27 FSSASSSTFLQSIPRSET--KLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTQLSL--L 86
FSS SSS +PR K I+NPLY+ LPQ+QNP IV+++ S L S+ + L L
Sbjct: 11 FSSYSSSI----VPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNL 70
Query: 87 QSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVKFDLGITLNSQNYCLIIHILAWS 146
+ ++K L+PHLG+ EIS+++LR QS+ + FF WVKFDLG N NYCL++HIL S
Sbjct: 71 RDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSS 130
Query: 147 RQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLMKAYVKVHMIQE 206
++F +AM+FL ELIEL+ + DVF LV T+ CNW+PV+F+ML+K Y+K+ +++E
Sbjct: 131 KKFPLAMQFLCELIELT--SKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE 190
Query: 207 SYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTY 266
+ F++++ GF SV+ CN +LNGL K+ CW++Y M R+G+H N YTFNILT
Sbjct: 191 GFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTN 250
Query: 267 VLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYCRRGRLDDAFYLYRIMFRRGVMP 326
V C + +V++FLEKMEEEGF+PD+VTYNTL+ SYCRRGRL +AFYLY+IM+RR V+P
Sbjct: 251 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 310
Query: 327 DLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLL 386
DLV+YTSL+ GLCK GRVREAHQ FHRM+DR + PD + YNTLI AYCK+G +Q+++ LL
Sbjct: 311 DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLL 370
Query: 387 HDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVELRKLGTIVTYDIYDYLIVSLCLE 446
H+M + PD FTC+++VEG+ R G L+SA+N VVELR+L + +++ D+LIVSLC E
Sbjct: 371 HEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQE 430
Query: 447 DRPFAAKSVLERVI-KDGFQPNACIYNKLIECFCRVHNVSEALLLKSEMIKRNFKLSIDS 506
+PFAAK +L+R+I ++G + YN LIE R + EAL+LK ++ +N L +
Sbjct: 431 GKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKT 490
Query: 507 YKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFA 566
Y+ LI CLC + R+ + E LM EM +S V PD IC L+ GYCKE + KAE LL FA
Sbjct: 491 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 550
Query: 567 KDFEFFDTESFNALVKFHRDFG-NETELMQLQDRMLKVGFVPNSLTCRYVIHGL 615
+F FD ES+N+LVK + G + ++LQ+RM ++GFVPN LTC+Y+I L
Sbjct: 551 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
BLAST of Cp4.1LG01g23300 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 5.7e-62
Identity = 153/525 (29.14%), Postives = 263/525 (50.10%), Query Frame = 0
Query: 99 SKIILRCQSNFVSVLAFFNWVKFDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIEL 158
S ++L+ Q++ +L F NW TL + C+ +HIL + + A ++
Sbjct: 52 SNLLLKSQNDQALILKFLNWANPHQFFTLRCK--CITLHILTKFKLYKTAQILAEDVAAK 111
Query: 159 SKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPS 218
+ D+ S VF +L + C +F++++K+Y ++ +I ++ GF+P
Sbjct: 112 TLDDEYASL-VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 171
Query: 219 VIACNCILNGLAKMKCDAQCWE-LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFL 278
V++ N +L+ + K + E +++EM V N +T+NIL C AG+++
Sbjct: 172 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 231
Query: 279 EKMEEEGFDPDVVTYNTLIDSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKL 338
+KME +G P+VVTYNTLID YC+ ++DD F L R M +G+ P+L+SY ++NGLC+
Sbjct: 232 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 291
Query: 339 GRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTC 398
GR++E + M R D V YNTLI YCK+G +A + +M R G+ P T
Sbjct: 292 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 351
Query: 399 RIMVEGYGRGGSLISALNLVVELRKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIK 458
++ + G++ A+ + ++R G Y L+ + A VL +
Sbjct: 352 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 411
Query: 459 DGFQPNACIYNKLIECFCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVD 518
+GF P+ YN LI C + +A+ + +M ++ + SY ++S C RS D
Sbjct: 412 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYD 471
Query: 519 -GEGLMV--EMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNA 578
E L V EMVE G+ PD LI G+C++ +A L + D ++ A
Sbjct: 472 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 531
Query: 579 LVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSAR 620
L+ + G+ + +QL + M++ G +P+ +T +I+GL K +R
Sbjct: 532 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
BLAST of Cp4.1LG01g23300 vs. ExPASy Swiss-Prot
Match:
Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)
HSP 1 Score: 239.6 bits (610), Expect = 9.8e-62
Identity = 151/507 (29.78%), Postives = 244/507 (48.13%), Query Frame = 0
Query: 113 LAFFNWVKFDLGITLNS--QNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVF 172
L F WV G+ + Q C+ HIL +R + A L EL +S S VF
Sbjct: 54 LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS----GKSSFVF 113
Query: 173 HNLVLCTEHCNWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLA 232
L+ CN NP ++++L++ Y++ MIQ+S E F+ M GF PSV CN IL +
Sbjct: 114 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 173
Query: 233 KMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVV 292
K D W +EM + + + TFNIL VLC G K + ++KME+ G+ P +V
Sbjct: 174 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 233
Query: 293 TYNTLIDSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRM 352
TYNT++ YC++GR A L M +GV D+ +Y L++ LC+ R+ + + L M
Sbjct: 234 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 293
Query: 353 IDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSL 412
R + P+ V YNTLIN + +G++ A LL++M G+ P+ T +++G+ G+
Sbjct: 294 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 353
Query: 413 ISALNLVVELRKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKL 472
AL + + G + Y L+ LC A+ R+ ++G Y +
Sbjct: 354 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 413
Query: 473 IECFCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGV 532
I+ C+ + EA++L +EM K I +Y LI+ C V R + ++ + G+
Sbjct: 414 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 473
Query: 533 LPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQ 592
P+ I LI C+ G + +A + + + D +FN LV G E +
Sbjct: 474 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 533
Query: 593 LQDRMLKVGFVPNSLTCRYVIHGLWKS 618
M G +PN+++ +I+G S
Sbjct: 534 FMRCMTSDGILPNTVSFDCLINGYGNS 556
BLAST of Cp4.1LG01g23300 vs. ExPASy Swiss-Prot
Match:
O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)
HSP 1 Score: 237.3 bits (604), Expect = 4.8e-61
Identity = 143/505 (28.32%), Postives = 256/505 (50.69%), Query Frame = 0
Query: 113 LAFFNWVKFDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHN 172
L +++W+ + I+++ + ++H LA ++++S FL + D+ S +FH
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS--IFHA 144
Query: 173 LVLCTEHCNWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKM 232
+ +C C N +I +ML+ AY + +E+FK+ G+ S ++C ++ L K
Sbjct: 145 ISMCDNVC-VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKE 204
Query: 233 KCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTY 292
A +Y+EM R + N +TFN++ LC+ G +NK + +E M+ G P+VV+Y
Sbjct: 205 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 264
Query: 293 NTLIDSYCR---RGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHR 352
NTLID YC+ G++ A + + M V P+L ++ L++G K + + ++F
Sbjct: 265 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 324
Query: 353 MIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGS 412
M+D+++ P+V+ YN+LIN C G++ EA S+ M G+ P+ T ++ G+ +
Sbjct: 325 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 384
Query: 413 LISALNLVVELRKLGTIVTYDIYDYLIVSLC---LEDRPFAAKSVLERVIKDGFQPNACI 472
L AL++ ++ G + T +Y+ LI + C D FA K +ER +G P+
Sbjct: 385 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIVPDVGT 444
Query: 473 YNKLIECFCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMV 532
YN LI CR N+ A L ++ + + ++ L+ C S L+ EM
Sbjct: 445 YNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 504
Query: 533 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEF-FDTESFNALVKFHRDFGNE 592
+ G+ P H +++ GYCKEGN+ A ++ K+ + S+N L++ + G
Sbjct: 505 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 564
Query: 593 TELMQLQDRMLKVGFVPNSLTCRYV 611
+ L + ML+ G VPN +T V
Sbjct: 565 EDANMLLNEMLEKGLVPNRITYEIV 582
BLAST of Cp4.1LG01g23300 vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 235.7 bits (600), Expect = 1.4e-60
Identity = 161/654 (24.62%), Postives = 292/654 (44.65%), Query Frame = 0
Query: 5 PASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQNPFNI 64
P NLT S P F +S S+ SSAS S + +
Sbjct: 20 PLKNLTTSSSPVFEPSSSSSSSSSSASFSV-------------------------SDSFL 79
Query: 65 VELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVKFDL- 124
VE + LK N ++++ L L + +++ RC+++ F + + F
Sbjct: 80 VEKICFSLKQGN-------NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFP 139
Query: 125 GITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWN 184
S + +IHIL S + S A L +I S ++ ++L +C N
Sbjct: 140 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRS---GVSRLEIVNSLDSTFSNCGSN 199
Query: 185 PVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYE 244
+F++L++ YV+ ++E++E+F + GF S+ ACN ++ L ++ W +Y+
Sbjct: 200 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 259
Query: 245 EMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYCRRG 304
E+ R GV N YT NI+ LC+ G + KV FL +++E+G PD+VTYNTLI +Y +G
Sbjct: 260 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 319
Query: 305 RLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYN 364
+++AF L M +G P + +Y +++NGLCK G+ A ++F M+ L PD Y
Sbjct: 320 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 379
Query: 365 TLINAYCKDGRLQEARSLLHDM-----------------------------------TRI 424
+L+ CK G + E + DM
Sbjct: 380 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 439
Query: 425 GICPDSFTCRIMVEGYGRGGSLISALNLVVELRKLGTIVTYDIYDYLIVSLCLEDRPFAA 484
G+ PD+ I+++GY R G + A+NL E+ + G + Y+ ++ LC A
Sbjct: 440 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 499
Query: 485 KSVLERVIKDGFQPNACIYNKLIECFCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISC 544
+ + + P++ LI+ C++ N+ A+ L +M ++ +L + +Y L+
Sbjct: 500 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 559
Query: 545 LCGVNRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFD 604
V + + +MV +LP +L+N C +G++ +A +
Sbjct: 560 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 619
Query: 605 TESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSARLDK 623
N+++K + GN ++ ++M+ GFVP+ ++ +I+G + + K
Sbjct: 620 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
BLAST of Cp4.1LG01g23300 vs. NCBI nr
Match:
XP_023535833.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1281 bits (3315), Expect = 0.0
Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV
Sbjct: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
BLAST of Cp4.1LG01g23300 vs. NCBI nr
Match:
XP_022922085.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita moschata])
HSP 1 Score: 1258 bits (3256), Expect = 0.0
Identity = 619/633 (97.79%), Postives = 627/633 (99.05%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPF FLASIPKSNFSSASSSTFL SIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGG LISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
RKLGTIVTY+IYDYLIVSLCLEDRPFAAKSVLER+IKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM+KRNFKLSIDSYKPLISCLCG+NRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
BLAST of Cp4.1LG01g23300 vs. NCBI nr
Match:
KAG7033098.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1257 bits (3252), Expect = 0.0
Identity = 618/633 (97.63%), Postives = 626/633 (98.89%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPF FLASIPKSNFSSASSSTFL SIPRSETKL VNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLTVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
LYNTLI+AYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGGSL+SALNLVVEL
Sbjct: 361 LYNTLIHAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLVSALNLVVEL 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
RKLGTIVTY+IYDYLIVSLCLEDRPFAAKSVLER+IKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM+KRNFKLSIDSYKPLISCLCG+NRSVDGEGLMVEM ESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMAESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
VPNSLTCRYVIHGLWKSARLD+RRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDERRVQAPLCQRG 633
BLAST of Cp4.1LG01g23300 vs. NCBI nr
Match:
KAG6602420.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1254 bits (3245), Expect = 0.0
Identity = 618/633 (97.63%), Postives = 625/633 (98.74%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPF FLASIPKSNFSSASSSTFL SIPRSETKL VNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLTVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
LYNTLI+AYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGGSL+SALNLVVEL
Sbjct: 361 LYNTLIHAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLVSALNLVVEL 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
RKLGTIVTY+IYDYLIVSLCLEDRPFAAKSVLER+IKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM+KRNFKLSIDSYKPLISCLCG+NRSVDGEGLMVEM ESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMAESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
VPNSLTCRYVI GLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVILGLWKSARLDKRRVQAPLCQRG 633
BLAST of Cp4.1LG01g23300 vs. NCBI nr
Match:
XP_022991028.1 (pentatricopeptide repeat-containing protein At5g40400 [Cucurbita maxima])
HSP 1 Score: 1250 bits (3234), Expect = 0.0
Identity = 615/633 (97.16%), Postives = 623/633 (98.42%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPF FLASIPKSNFSSASSSTFLQS+PRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLQSVPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTHLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVKVHMIQESYESFKKMVKMGFVPSVIACN ILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNRILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCK GRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKFGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
R+LGTIVT+DIYDYLIVSLC EDRPFAAKSVLER+IKDGFQPNACIYNKLIECFCRVHNV
Sbjct: 421 RRLGTIVTFDIYDYLIVSLCQEDRPFAAKSVLERIIKDGFQPNACIYNKLIECFCRVHNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMI+RN KLSIDSYKPLISCLCG+NRSVDGE LMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIRRNLKLSIDSYKPLISCLCGINRSVDGEDLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGN YKAESLLVSFAKDFEFFDTESFNAL+KFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNAYKAESLLVSFAKDFEFFDTESFNALLKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
BLAST of Cp4.1LG01g23300 vs. ExPASy TrEMBL
Match:
A0A6J1E7L8 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita moschata OX=3662 GN=LOC111430138 PE=4 SV=1)
HSP 1 Score: 1258 bits (3256), Expect = 0.0
Identity = 619/633 (97.79%), Postives = 627/633 (99.05%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPF FLASIPKSNFSSASSSTFL SIPRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLPSIPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHRE+SKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTNLSLLQSDIKELLPHLGHREVSKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITL+SQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLSSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNKVNEFLEKMEEEGFDPDVVTYNTLI+SYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLINSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGG LISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGRLISALNLVVEL 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
RKLGTIVTY+IYDYLIVSLCLEDRPFAAKSVLER+IKDGFQPNACIYNKLIE FCRVHNV
Sbjct: 421 RKLGTIVTYEIYDYLIVSLCLEDRPFAAKSVLERIIKDGFQPNACIYNKLIESFCRVHNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEM+KRNFKLSIDSYKPLISCLCG+NRSVDGEGLMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMVKRNFKLSIDSYKPLISCLCGINRSVDGEGLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
BLAST of Cp4.1LG01g23300 vs. ExPASy TrEMBL
Match:
A0A6J1JUZ7 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita maxima OX=3661 GN=LOC111487742 PE=4 SV=1)
HSP 1 Score: 1250 bits (3234), Expect = 0.0
Identity = 615/633 (97.16%), Postives = 623/633 (98.42%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
MHRIPASNLTKLSKPF FLASIPKSNFSSASSSTFLQS+PRSETKLIVNPLYHFLPQNQN
Sbjct: 1 MHRIPASNLTKLSKPFVFLASIPKSNFSSASSSTFLQSVPRSETKLIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVSSHLKTSNT LSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK
Sbjct: 61 PFNIVELVSSHLKTSNTHLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC
Sbjct: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVKVHMIQESYESFKKMVKMGFVPSVIACN ILNGLAKMKCDAQCWE
Sbjct: 181 NWNPVIFEMLIKAYVKVHMIQESYESFKKMVKMGFVPSVIACNRILNGLAKMKCDAQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRVGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCK GRVREAHQLFHRMIDRELDPDVV
Sbjct: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKFGRVREAHQLFHRMIDRELDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
LYNTLINAYCKDGRLQEARSLLHDM RIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL
Sbjct: 361 LYNTLINAYCKDGRLQEARSLLHDMIRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
R+LGTIVT+DIYDYLIVSLC EDRPFAAKSVLER+IKDGFQPNACIYNKLIECFCRVHNV
Sbjct: 421 RRLGTIVTFDIYDYLIVSLCQEDRPFAAKSVLERIIKDGFQPNACIYNKLIECFCRVHNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMI+RN KLSIDSYKPLISCLCG+NRSVDGE LMVEMVESGVLPDHQICRVL
Sbjct: 481 SEALLLKSEMIRRNLKLSIDSYKPLISCLCGINRSVDGEDLMVEMVESGVLPDHQICRVL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
INGYCKEGN YKAESLLVSFAKDFEFFDTESFNAL+KFHRDFGNETELMQLQDRMLKVGF
Sbjct: 541 INGYCKEGNAYKAESLLVSFAKDFEFFDTESFNALLKFHRDFGNETELMQLQDRMLKVGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG
Sbjct: 601 VPNSLTCRYVIHGLWKSARLDKRRVQAPLCQRG 633
BLAST of Cp4.1LG01g23300 vs. ExPASy TrEMBL
Match:
A0A0A0KSF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523120 PE=4 SV=1)
HSP 1 Score: 1027 bits (2655), Expect = 0.0
Identity = 507/633 (80.09%), Postives = 562/633 (88.78%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSS-------TFLQSIPRSETKLIVNPLYH 60
M R ASNL KL++ FFF S KS SS+SSS TFLQSIP SE KLIVNPLYH
Sbjct: 1 MLRTTASNLPKLAQSFFFHTSFSKSTLSSSSSSSSSSSSSTFLQSIPESEAKLIVNPLYH 60
Query: 61 FLPQNQNPFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVL 120
FLPQNQNPFNIVELVSSHLKT+N +L+LLQS IKEL+PHLGHR+ISKI+LRCQSNFVS L
Sbjct: 61 FLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSAL 120
Query: 121 AFFNWVKFDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNL 180
AFFNWVK+DL I L+S NYCLIIHILAWSRQF +AMKFLSELIELSKD S SEDVF NL
Sbjct: 121 AFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKD-VSSSEDVFQNL 180
Query: 181 VLCTEHCNWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMK 240
VLCTEHCNWNPVIFEML+KAYVK+ +I ESY SFKKMVK+GFVP+VIACNCILNGLAKMK
Sbjct: 181 VLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK 240
Query: 241 CDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYN 300
DAQCWELYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+N FLEKMEEEGFDPDVVTYN
Sbjct: 241 SDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYN 300
Query: 301 TLIDSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDR 360
TLIDSY RRGRL+DAFYLY+IM+RRGVMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR
Sbjct: 301 TLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDR 360
Query: 361 ELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISA 420
+DPDVVLYNTLI AYCKDG LQEARSLLH+M IGI PDSFTCRI+VEGYGR G LISA
Sbjct: 361 GMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISA 420
Query: 421 LNLVVELRKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIEC 480
LNLVVE++KLG V +DIY YLI+SLC EDRPFAAKS+LER+++D FQP++ IYNKLIE
Sbjct: 421 LNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIES 480
Query: 481 FCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPD 540
FCR +NVSEALLLK EMI RN+K + D+YK LI C+C +NRSVDGEGLMVEMVES V+PD
Sbjct: 481 FCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPD 540
Query: 541 HQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQD 600
H+ICR L+NGYCKEGN KAESLLVSFAKDF+FFD+ESFN+LVK +RD GNET+LM+LQD
Sbjct: 541 HEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQD 600
Query: 601 RMLKVGFVPNSLTCRYVIHGLWKSARLDKRRVQ 626
RMLK GF+PNSLTCRY+IHG+WKS RL+K+RVQ
Sbjct: 601 RMLKAGFLPNSLTCRYIIHGIWKSMRLNKQRVQ 632
BLAST of Cp4.1LG01g23300 vs. ExPASy TrEMBL
Match:
A0A1S3C995 (pentatricopeptide repeat-containing protein At5g40400 OS=Cucumis melo OX=3656 GN=LOC103498097 PE=4 SV=1)
HSP 1 Score: 1017 bits (2630), Expect = 0.0
Identity = 501/627 (79.90%), Postives = 557/627 (88.84%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
M R ASNL KLS+ FFFL+S KS SS+SSSTFLQSIP SE K IVNPLYHFLPQNQN
Sbjct: 1 MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVS HLKT+N +L+LLQ++IK L+P+LGH +ISKI+LRCQSNFVS LAFFNWVK
Sbjct: 61 PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
+DL I LNS NYCLIIHILAWSRQF +AMK LSELIELSKD S SEDVF NLVLCTEHC
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKD-VSSSEDVFQNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVK+ +I ESY SFKKMVK+GFVPSVIACNCIL+GLAKMK D QCWE
Sbjct: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPSVIACNCILHGLAKMKSDGQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+NEFLEKMEEEGFDPDVVTYNTLIDSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIM+RR VMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR +DPDVV
Sbjct: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
YNTLI AYCKDG LQEARSLLHDM IGI PD+FTCRI+VEGYGR G LISALNLVVE+
Sbjct: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
+KLG + +DIY YLI+SLC EDRPFAAKS+LER+++D FQP++ IYNKLIE FCR +NV
Sbjct: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMI RNFK +I +YK LI C+C +NRSVDGEGLM EMVES VLPDH+ICR L
Sbjct: 481 SEALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
+NGYCKEGN KAESLLVSFAKDF+FFD+ESFN+LVK + D GNET+LM+LQ RMLK GF
Sbjct: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQA 627
+PN+LTC+Y+IHGLWK RL+++RVQA
Sbjct: 601 LPNNLTCQYIIHGLWKFTRLNEQRVQA 626
BLAST of Cp4.1LG01g23300 vs. ExPASy TrEMBL
Match:
A0A5D3BTR0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00460 PE=4 SV=1)
HSP 1 Score: 1016 bits (2627), Expect = 0.0
Identity = 500/627 (79.74%), Postives = 557/627 (88.84%), Query Frame = 0
Query: 1 MHRIPASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQN 60
M R ASNL KLS+ FFFL+S KS SS+SSSTFLQSIP SE K IVNPLYHFLPQNQN
Sbjct: 1 MLRTTASNLPKLSQSFFFLSSFSKSTLSSSSSSTFLQSIPESEAKSIVNPLYHFLPQNQN 60
Query: 61 PFNIVELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVK 120
PFNIVELVS HLKT+N +L+LLQ++IK L+P+LGH +ISKI+LRCQSNFVS LAFFNWVK
Sbjct: 61 PFNIVELVSLHLKTNNPRLALLQANIKGLIPYLGHCQISKILLRCQSNFVSALAFFNWVK 120
Query: 121 FDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHC 180
+DL I LNS NYCLIIHILAWSRQF +AMK LSELIELSKD S SEDVF NLVLCTEHC
Sbjct: 121 YDLDIRLNSHNYCLIIHILAWSRQFPLAMKLLSELIELSKD-VSSSEDVFQNLVLCTEHC 180
Query: 181 NWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWE 240
NWNPVIFEML+KAYVK+ +I ESY SFK+MVK+GFVPSVIACNCIL+GLAKMK D QCWE
Sbjct: 181 NWNPVIFEMLIKAYVKLDLIHESYWSFKRMVKLGFVPSVIACNCILHGLAKMKSDGQCWE 240
Query: 241 LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYC 300
LYEEMGRIGVHSNAYTFNILTYVLCR GDVNK+NEFLEKMEEEGFDPDVVTYNTLIDSYC
Sbjct: 241 LYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINEFLEKMEEEGFDPDVVTYNTLIDSYC 300
Query: 301 RRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVV 360
RRGRLDDAFYLYRIM+RR VMPDLVSYTSLM GLC+LGRVREAHQLFHRMIDR +DPDVV
Sbjct: 301 RRGRLDDAFYLYRIMYRRSVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVV 360
Query: 361 LYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVEL 420
YNTLI AYCKDG LQEARSLLHDM IGI PD+FTCRI+VEGYGR G LISALNLVVE+
Sbjct: 361 SYNTLIGAYCKDGMLQEARSLLHDMIGIGIHPDNFTCRILVEGYGREGRLISALNLVVEI 420
Query: 421 RKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKLIECFCRVHNV 480
+KLG + +DIY YLI+SLC EDRPFAAKS+LER+++D FQP++ IYNKLIE FCR +NV
Sbjct: 421 QKLGVTIAHDIYKYLIISLCQEDRPFAAKSLLERILEDRFQPDSDIYNKLIESFCRSNNV 480
Query: 481 SEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVL 540
SEALLLKSEMI RNFK +I +YK LI C+C +NRSVDGEGLM EMVES VLPDH+ICR L
Sbjct: 481 SEALLLKSEMINRNFKPTIYTYKSLIHCMCEINRSVDGEGLMEEMVESEVLPDHEICRAL 540
Query: 541 INGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQLQDRMLKVGF 600
+NGYCKEGN KAESLLVSFAKDF+FFD+ESFN+LVK + D GNET+LM+LQ RMLK GF
Sbjct: 541 VNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYCDMGNETKLMELQTRMLKAGF 600
Query: 601 VPNSLTCRYVIHGLWKSARLDKRRVQA 627
+PN+LTC+Y+IHGLWK RL+++RVQA
Sbjct: 601 LPNNLTCQYIIHGLWKFTRLNEQRVQA 626
BLAST of Cp4.1LG01g23300 vs. TAIR 10
Match:
AT5G40400.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 603.6 bits (1555), Expect = 1.8e-172
Identity = 301/594 (50.67%), Postives = 417/594 (70.20%), Query Frame = 0
Query: 27 FSSASSSTFLQSIPRSET--KLIVNPLYHFLPQNQNPFNIVELVSSHLKTSNTQLSL--L 86
FSS SSS +PR K I+NPLY+ LPQ+QNP IV+++ S L S+ + L L
Sbjct: 11 FSSYSSSI----VPRCSNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNL 70
Query: 87 QSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVKFDLGITLNSQNYCLIIHILAWS 146
+ ++K L+PHLG+ EIS+++LR QS+ + FF WVKFDLG N NYCL++HIL S
Sbjct: 71 RDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSS 130
Query: 147 RQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLMKAYVKVHMIQE 206
++F +AM+FL ELIEL+ + DVF LV T+ CNW+PV+F+ML+K Y+K+ +++E
Sbjct: 131 KKFPLAMQFLCELIELT--SKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEE 190
Query: 207 SYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYEEMGRIGVHSNAYTFNILTY 266
+ F++++ GF SV+ CN +LNGL K+ CW++Y M R+G+H N YTFNILT
Sbjct: 191 GFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTN 250
Query: 267 VLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYCRRGRLDDAFYLYRIMFRRGVMP 326
V C + +V++FLEKMEEEGF+PD+VTYNTL+ SYCRRGRL +AFYLY+IM+RR V+P
Sbjct: 251 VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVP 310
Query: 327 DLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLL 386
DLV+YTSL+ GLCK GRVREAHQ FHRM+DR + PD + YNTLI AYCK+G +Q+++ LL
Sbjct: 311 DLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLL 370
Query: 387 HDMTRIGICPDSFTCRIMVEGYGRGGSLISALNLVVELRKLGTIVTYDIYDYLIVSLCLE 446
H+M + PD FTC+++VEG+ R G L+SA+N VVELR+L + +++ D+LIVSLC E
Sbjct: 371 HEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQE 430
Query: 447 DRPFAAKSVLERVI-KDGFQPNACIYNKLIECFCRVHNVSEALLLKSEMIKRNFKLSIDS 506
+PFAAK +L+R+I ++G + YN LIE R + EAL+LK ++ +N L +
Sbjct: 431 GKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKT 490
Query: 507 YKPLISCLCGVNRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFA 566
Y+ LI CLC + R+ + E LM EM +S V PD IC L+ GYCKE + KAE LL FA
Sbjct: 491 YRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFA 550
Query: 567 KDFEFFDTESFNALVKFHRDFG-NETELMQLQDRMLKVGFVPNSLTCRYVIHGL 615
+F FD ES+N+LVK + G + ++LQ+RM ++GFVPN LTC+Y+I L
Sbjct: 551 MEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
BLAST of Cp4.1LG01g23300 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 240.4 bits (612), Expect = 4.1e-63
Identity = 153/525 (29.14%), Postives = 263/525 (50.10%), Query Frame = 0
Query: 99 SKIILRCQSNFVSVLAFFNWVKFDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIEL 158
S ++L+ Q++ +L F NW TL + C+ +HIL + + A ++
Sbjct: 52 SNLLLKSQNDQALILKFLNWANPHQFFTLRCK--CITLHILTKFKLYKTAQILAEDVAAK 111
Query: 159 SKDNASGSEDVFHNLVLCTEHCNWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPS 218
+ D+ S VF +L + C +F++++K+Y ++ +I ++ GF+P
Sbjct: 112 TLDDEYASL-VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPG 171
Query: 219 VIACNCILNGLAKMKCDAQCWE-LYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFL 278
V++ N +L+ + K + E +++EM V N +T+NIL C AG+++
Sbjct: 172 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 231
Query: 279 EKMEEEGFDPDVVTYNTLIDSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKL 338
+KME +G P+VVTYNTLID YC+ ++DD F L R M +G+ P+L+SY ++NGLC+
Sbjct: 232 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 291
Query: 339 GRVREAHQLFHRMIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTC 398
GR++E + M R D V YNTLI YCK+G +A + +M R G+ P T
Sbjct: 292 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 351
Query: 399 RIMVEGYGRGGSLISALNLVVELRKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIK 458
++ + G++ A+ + ++R G Y L+ + A VL +
Sbjct: 352 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 411
Query: 459 DGFQPNACIYNKLIECFCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVD 518
+GF P+ YN LI C + +A+ + +M ++ + SY ++S C RS D
Sbjct: 412 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYD 471
Query: 519 -GEGLMV--EMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNA 578
E L V EMVE G+ PD LI G+C++ +A L + D ++ A
Sbjct: 472 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 531
Query: 579 LVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSAR 620
L+ + G+ + +QL + M++ G +P+ +T +I+GL K +R
Sbjct: 532 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
BLAST of Cp4.1LG01g23300 vs. TAIR 10
Match:
AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 239.6 bits (610), Expect = 6.9e-63
Identity = 151/507 (29.78%), Postives = 244/507 (48.13%), Query Frame = 0
Query: 113 LAFFNWVKFDLGITLNS--QNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVF 172
L F WV G+ + Q C+ HIL +R + A L EL +S S VF
Sbjct: 94 LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS----GKSSFVF 153
Query: 173 HNLVLCTEHCNWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLA 232
L+ CN NP ++++L++ Y++ MIQ+S E F+ M GF PSV CN IL +
Sbjct: 154 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 213
Query: 233 KMKCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVV 292
K D W +EM + + + TFNIL VLC G K + ++KME+ G+ P +V
Sbjct: 214 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 273
Query: 293 TYNTLIDSYCRRGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRM 352
TYNT++ YC++GR A L M +GV D+ +Y L++ LC+ R+ + + L M
Sbjct: 274 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 333
Query: 353 IDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGSL 412
R + P+ V YNTLIN + +G++ A LL++M G+ P+ T +++G+ G+
Sbjct: 334 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 393
Query: 413 ISALNLVVELRKLGTIVTYDIYDYLIVSLCLEDRPFAAKSVLERVIKDGFQPNACIYNKL 472
AL + + G + Y L+ LC A+ R+ ++G Y +
Sbjct: 394 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 453
Query: 473 IECFCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMVESGV 532
I+ C+ + EA++L +EM K I +Y LI+ C V R + ++ + G+
Sbjct: 454 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 513
Query: 533 LPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFDTESFNALVKFHRDFGNETELMQ 592
P+ I LI C+ G + +A + + + D +FN LV G E +
Sbjct: 514 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 573
Query: 593 LQDRMLKVGFVPNSLTCRYVIHGLWKS 618
M G +PN+++ +I+G S
Sbjct: 574 FMRCMTSDGILPNTVSFDCLINGYGNS 596
BLAST of Cp4.1LG01g23300 vs. TAIR 10
Match:
AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 237.3 bits (604), Expect = 3.4e-62
Identity = 143/505 (28.32%), Postives = 256/505 (50.69%), Query Frame = 0
Query: 113 LAFFNWVKFDLGITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHN 172
L +++W+ + I+++ + ++H LA ++++S FL + D+ S +FH
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHS--IFHA 144
Query: 173 LVLCTEHCNWNPVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKM 232
+ +C C N +I +ML+ AY + +E+FK+ G+ S ++C ++ L K
Sbjct: 145 ISMCDNVC-VNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKE 204
Query: 233 KCDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTY 292
A +Y+EM R + N +TFN++ LC+ G +NK + +E M+ G P+VV+Y
Sbjct: 205 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 264
Query: 293 NTLIDSYCR---RGRLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHR 352
NTLID YC+ G++ A + + M V P+L ++ L++G K + + ++F
Sbjct: 265 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 324
Query: 353 MIDRELDPDVVLYNTLINAYCKDGRLQEARSLLHDMTRIGICPDSFTCRIMVEGYGRGGS 412
M+D+++ P+V+ YN+LIN C G++ EA S+ M G+ P+ T ++ G+ +
Sbjct: 325 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 384
Query: 413 LISALNLVVELRKLGTIVTYDIYDYLIVSLC---LEDRPFAAKSVLERVIKDGFQPNACI 472
L AL++ ++ G + T +Y+ LI + C D FA K +ER +G P+
Sbjct: 385 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER---EGIVPDVGT 444
Query: 473 YNKLIECFCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISCLCGVNRSVDGEGLMVEMV 532
YN LI CR N+ A L ++ + + ++ L+ C S L+ EM
Sbjct: 445 YNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMS 504
Query: 533 ESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEF-FDTESFNALVKFHRDFGNE 592
+ G+ P H +++ GYCKEGN+ A ++ K+ + S+N L++ + G
Sbjct: 505 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 564
Query: 593 TELMQLQDRMLKVGFVPNSLTCRYV 611
+ L + ML+ G VPN +T V
Sbjct: 565 EDANMLLNEMLEKGLVPNRITYEIV 582
BLAST of Cp4.1LG01g23300 vs. TAIR 10
Match:
AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 235.7 bits (600), Expect = 1.0e-61
Identity = 161/654 (24.62%), Postives = 292/654 (44.65%), Query Frame = 0
Query: 5 PASNLTKLSKPFFFLASIPKSNFSSASSSTFLQSIPRSETKLIVNPLYHFLPQNQNPFNI 64
P NLT S P F +S S+ SSAS S + +
Sbjct: 20 PLKNLTTSSSPVFEPSSSSSSSSSSASFSV-------------------------SDSFL 79
Query: 65 VELVSSHLKTSNTQLSLLQSDIKELLPHLGHREISKIILRCQSNFVSVLAFFNWVKFDL- 124
VE + LK N ++++ L L + +++ RC+++ F + + F
Sbjct: 80 VEKICFSLKQGN-------NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFP 139
Query: 125 GITLNSQNYCLIIHILAWSRQFSMAMKFLSELIELSKDNASGSEDVFHNLVLCTEHCNWN 184
S + +IHIL S + S A L +I S ++ ++L +C N
Sbjct: 140 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRS---GVSRLEIVNSLDSTFSNCGSN 199
Query: 185 PVIFEMLMKAYVKVHMIQESYESFKKMVKMGFVPSVIACNCILNGLAKMKCDAQCWELYE 244
+F++L++ YV+ ++E++E+F + GF S+ ACN ++ L ++ W +Y+
Sbjct: 200 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 259
Query: 245 EMGRIGVHSNAYTFNILTYVLCRAGDVNKVNEFLEKMEEEGFDPDVVTYNTLIDSYCRRG 304
E+ R GV N YT NI+ LC+ G + KV FL +++E+G PD+VTYNTLI +Y +G
Sbjct: 260 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 319
Query: 305 RLDDAFYLYRIMFRRGVMPDLVSYTSLMNGLCKLGRVREAHQLFHRMIDRELDPDVVLYN 364
+++AF L M +G P + +Y +++NGLCK G+ A ++F M+ L PD Y
Sbjct: 320 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 379
Query: 365 TLINAYCKDGRLQEARSLLHDM-----------------------------------TRI 424
+L+ CK G + E + DM
Sbjct: 380 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 439
Query: 425 GICPDSFTCRIMVEGYGRGGSLISALNLVVELRKLGTIVTYDIYDYLIVSLCLEDRPFAA 484
G+ PD+ I+++GY R G + A+NL E+ + G + Y+ ++ LC A
Sbjct: 440 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 499
Query: 485 KSVLERVIKDGFQPNACIYNKLIECFCRVHNVSEALLLKSEMIKRNFKLSIDSYKPLISC 544
+ + + P++ LI+ C++ N+ A+ L +M ++ +L + +Y L+
Sbjct: 500 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 559
Query: 545 LCGVNRSVDGEGLMVEMVESGVLPDHQICRVLINGYCKEGNVYKAESLLVSFAKDFEFFD 604
V + + +MV +LP +L+N C +G++ +A +
Sbjct: 560 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 619
Query: 605 TESFNALVKFHRDFGNETELMQLQDRMLKVGFVPNSLTCRYVIHGLWKSARLDK 623
N+++K + GN ++ ++M+ GFVP+ ++ +I+G + + K
Sbjct: 620 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FND8 | 2.6e-171 | 50.67 | Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 5.7e-62 | 29.14 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9LVQ5 | 9.8e-62 | 29.78 | Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... | [more] |
O04504 | 4.8e-61 | 28.32 | Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... | [more] |
Q9LFC5 | 1.4e-60 | 24.62 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_023535833.1 | 0.0 | 100.00 | pentatricopeptide repeat-containing protein At5g40400 [Cucurbita pepo subsp. pep... | [more] |
XP_022922085.1 | 0.0 | 97.79 | pentatricopeptide repeat-containing protein At5g40400 [Cucurbita moschata] | [more] |
KAG7033098.1 | 0.0 | 97.63 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6602420.1 | 0.0 | 97.63 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022991028.1 | 0.0 | 97.16 | pentatricopeptide repeat-containing protein At5g40400 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E7L8 | 0.0 | 97.79 | pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1JUZ7 | 0.0 | 97.16 | pentatricopeptide repeat-containing protein At5g40400 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0KSF1 | 0.0 | 80.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523120 PE=4 SV=1 | [more] |
A0A1S3C995 | 0.0 | 79.90 | pentatricopeptide repeat-containing protein At5g40400 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5D3BTR0 | 0.0 | 79.74 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT5G40400.1 | 1.8e-172 | 50.67 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 4.1e-63 | 29.14 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G55840.1 | 6.9e-63 | 29.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G09820.1 | 3.4e-62 | 28.32 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G01110.1 | 1.0e-61 | 24.62 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |