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Cp4.1LG01g23240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACCCGCTGATAACAACCAGAGGTTGCACAGTGCGTCGTTGAATCAATTCCGCTCTGGGACTGATTTTCTGGTCGTCGGAGTTCCTGTTTTCTGATCAAACATTCGTATTCTCTCTTTTTCCATCTCTCTATTTCTTTTAGTGTTCATTTTGTTCTTCGATTTTTCTCTGATTCGAGGTTTGTTTTCGTGTTTTTTCTCAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCTGGTGGTGTGATGGGGTTTTGTGTTTCCCCATTGGGAACACCGGCTAGGTTACTGTGGAGTACCAGCTTCTTCCGCCACAAGCTCATGATTTTTTAATTTTCAGCTCTGTCGCTGAAAATACCAAACCCCCATCTAAATCTTTTCTTCTTTTAATAAAGATCTCCCTCGATTTCGTGTTCCTCTGGCCAATCCGTAATCGCTGGTGATCCCCTGTTCACGATACCTGTTTCAGATTTTAGAGAATAATTGATGATGACGGACGGTTTGATCTTCAACCGGTCTCCAGGTCACAGCAACATGCTGTTTTTCGGGAGTGGCGATTCCGTTCTTCGTGGTAATTTTCATTTTAGTTCACTGATTAGTAGAGGAATTGATGAATTTTTCATTCGAAGGGGGTTTTAATAAGTATATCGAGATAAAATTTCTTTAAATTGTGATTCTGCAAATGTTAGGACCAAGGTTCGCGATGGGGATGGAGGAAACTTCAAAGAGGCGACCCTTTTTCAGCTCACCGGATGACCTGTTCGACGACGACTACTACGATGACCAACCGCCTGAGAAGAAGCGCCGGCTAACTCAAGAGCAGGTATTCAAGCAATTCTAGTTTTGATAATATAGCGCATTTATTTCATTAATTGTTTCGAATCAATGCTGATCTCATTGTTAGCAAGTTCTGTGATGAGAAAAAATTAAGCATCGTTCTTAGATTATGAAACTTCACTCTTTCTCTAGATAAAATGATAAAGGAAAATTCCCACAGGGGGATCGGGTACATGGCTAGTATAATTGGGTACAATATCAAGTTCATTTTGAGTTTACAGTTTGTTTCTGTTCTGTTTCTGGTTTTCTTTACTGTTCTTGTTTTTTATCCTTCAGTGTTCCATTGCTTATTAATTACTGAGACTGCGCACCTTAGATTTTTATAACAATCTTTACTGCTGATCAACCCTTATTCATGGCCAACGATTAGGTGCATCTGCTGGAGATTAGTTTTGAATCAGAAAATAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAACAAACTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAAAATCGCCGAGCTCGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCCTTTCGTTCGAGCTATGACTTTGTTGTCAAGGAGAATGAAAGGCTCAAAGCCGAGGTATTTATCCCCACTGTAGTTTGTCATTTTGGCACTTTGGTTTTACAGTGGAGATTTTACCTTTGCTTCTGAACTGTTATTAATTGTCCATAAACCTTTCATATGTTTATGCCAAGTTTTGTAGATGCTGAGAACTGTCTTTGATGTGACATAAGTTTAAGTAGAATTCTTTGTAAACCTTTAGGATGGTGGCCATTTATCTTAGTTTCTTAAGATGACTCTGTAGTTTCGAGTTAATCTTACAAGTTTCTTAGTCACATTTAATCTAAGGACGTCTTGTAAACTTGTGGTCGTTCAGTTGAGTTCGACTTTTTAGGCACGAGAAGTTAATCTGGCATAGGTTCATAACCCAATTCCAAGGATTGAGAGAATATATGGGTTACTTTCATAGGGACTCAGTATTGTTACATACCTACCAGTCTCTTATGCATGCTCAATTTCTGAACTCAGGTAGCTTCTTTATCTGAGAAACTTCTAGCTAAGGAAGTGGTTGAATCCTCGTTTCAAGCTAAGAAATCCGAGCCATTTTTGGAACAACAAATCCTTGTTCCCGTTGTGCAACATAGTATGAAGATTGAGGACCACCATAGTTGCAGGAGCAATGGAAGTGCCGTGCTGGACGAGGATGGTCCTCATCTCTTAGACAGTGGGGATTCGTACCTCCTGAGCAATGACTATAATGGCTGTGTTTTGCCCGTTTTTGGAATGAACTCGGAGGAGGAGGATGGAAGTGACGATGGTCAGGGTTACTTCTCAGCCGTTTATACAACAGACGATCAGCAGACGAATGAGGTAGAGCCTTTGACCTGGTGGGACTGGACGTCATAATGCAACGTTCGAATCATCTCGATATGTAGTTGGGTGGAACTATAATATAAGGTTTACTGTTTGATACAGATGAATAAGGTTAAGGCTAGTGTGAATATTCCTTAGTTAATGTATGTGTATGGATAAAACTTACATCTTGTACCATTACAATGTTGTTCTGTGTTAAGGCCTTAGTTGGGCACCTTCAGGACTGGCCAAGTTGTAAAAATCTTTGTAATGTTGACCTTTTCTTTTTCGTTTCACACCCTCAATGTGTTCATCTTTTAAGAGCTCCCTTGGGTTGTTGTGCATTTTAGTCTAAGGCGTTAGTTGGGCACTTTAGAAAGCACGTGATTAAGAACAAAACATGTTGAAAGGACTCATGTTGATATATCGGATAGTTTTTTACTCTTAGAAGTGAGAAATAAGTAACATGATAATCTCGTAGGG TTACCCGCTGATAACAACCAGAGGTTGCACAGTGCGTCGTTGAATCAATTCCGCTCTGGGACTGATTTTCTGGTCGTCGGAGTTCCTGTTTTCTGATCAAACATTCGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCTGGTGGTGTGATGGGGTTTTGTGTTTCCCCATTGGGAACACCGGCTAGGTTACTGTGGAGTACCAGCTTCTTCCGCCACAAGCTCATGATTTTTTAATTTTCAGCTCTGTCGCTGAAAATACCAAACCCCCATCTAAATCTTTTCTTCTTTTAATAAAGATCTCCCTCGATTTCGTGTTCCTCTGGCCAATCCGTAATCGCTGGTGATCCCCTGTTCACGATACCTGTTTCAGATTTTAGAGAATAATTGATGATGACGGACGGTTTGATCTTCAACCGGTCTCCAGGTCACAGCAACATGCTGTTTTTCGGGAGTGGCGATTCCGTTCTTCGTGATAAAATGATAAAGGAAAATTCCCACAGGGGGATCGGGTACATGGCTAGTATAATTGGGTACAATATCAAGTTCATTTTGAGTTTACAGTTTGTTTCTGTTCTGTTTCTGGTGCATCTGCTGGAGATTAGTTTTGAATCAGAAAATAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAACAAACTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAAAATCGCCGAGCTCGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCCTTTCGTTCGAGCTATGACTTTGTTGTCAAGGAGAATGAAAGGCTCAAAGCCGAGGTAGCTTCTTTATCTGAGAAACTTCTAGCTAAGGAAGTGGTTGAATCCTCGTTTCAAGCTAAGAAATCCGAGCCATTTTTGGAACAACAAATCCTTGTTCCCGTTGTGCAACATAGTATGAAGATTGAGGACCACCATAGTTGCAGGAGCAATGGAAGTGCCGTGCTGGACGAGGATGGTCCTCATCTCTTAGACAGTGGGGATTCGTACCTCCTGAGCAATGACTATAATGGCTGTGTTTTGCCCGTTTTTGGAATGAACTCGGAGGAGGAGGATGGAAGTGACGATGGTCAGGGTTACTTCTCAGCCGTTTATACAACAGACGATCAGCAGACGAATGAGGTAGAGCCTTTGACCTGGTGGGACTGGACGTCATAATGCAACGTTCGAATCATCTCGATATGTAGTTGGGTGGAACTATAATATAAGGTTTACTGTTTGATACAGATGAATAAGGTTAAGGCTAGTGTGAATATTCCTTAGTTAATGTATGTGTATGGATAAAACTTACATCTTGTACCATTACAATGTTGTTCTGTGTTAAGGCCTTAGTTGGGCACCTTCAGGACTGGCCAAGTTGTAAAAATCTTTGTAATGTTGACCTTTTCTTTTTCGTTTCACACCCTCAATGTGTTCATCTTTTAAGAGCTCCCTTGGGTTGTTGTGCATTTTAGTCTAAGGCGTTAGTTGGGCACTTTAGAAAGCACGTGATTAAGAACAAAACATGTTGAAAGGACTCATGTTGATATATCGGATAGTTTTTTACTCTTAGAAGTGAGAAATAAGTAACATGATAATCTCGTAGGG ATGATGACGGACGGTTTGATCTTCAACCGGTCTCCAGGTCACAGCAACATGCTGTTTTTCGGGAGTGGCGATTCCGTTCTTCGTGATAAAATGATAAAGGAAAATTCCCACAGGGGGATCGGGTACATGGCTAGTATAATTGGGTACAATATCAAGTTCATTTTGAGTTTACAGTTTGTTTCTGTTCTGTTTCTGGTGCATCTGCTGGAGATTAGTTTTGAATCAGAAAATAAACTGGAGCCAGAGCGCAAGACTGAGCTAGCAAACAAACTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAAAATCGCCGAGCTCGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCCTTTCGTTCGAGCTATGACTTTGTTGTCAAGGAGAATGAAAGGCTCAAAGCCGAGGTAGCTTCTTTATCTGAGAAACTTCTAGCTAAGGAAGTGGTTGAATCCTCGTTTCAAGCTAAGAAATCCGAGCCATTTTTGGAACAACAAATCCTTGTTCCCGTTGTGCAACATAGTATGAAGATTGAGGACCACCATAGTTGCAGGAGCAATGGAAGTGCCGTGCTGGACGAGGATGGTCCTCATCTCTTAGACAGTGGGGATTCGTACCTCCTGAGCAATGACTATAATGGCTGTGTTTTGCCCGTTTTTGGAATGAACTCGGAGGAGGAGGATGGAAGTGACGATGGTCAGGGTTACTTCTCAGCCGTTTATACAACAGACGATCAGCAGACGAATGAGGTAGAGCCTTTGACCTGGTGGGACTGGACGTCATAA MMTDGLIFNRSPGHSNMLFFGSGDSVLRDKMIKENSHRGIGYMASIIGYNIKFILSLQFVSVLFLVHLLEISFESENKLEPERKTELANKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSFRSSYDFVVKENERLKAEVASLSEKLLAKEVVESSFQAKKSEPFLEQQILVPVVQHSMKIEDHHSCRSNGSAVLDEDGPHLLDSGDSYLLSNDYNGCVLPVFGMNSEEEDGSDDGQGYFSAVYTTDDQQTNEVEPLTWWDWTS Homology
BLAST of Cp4.1LG01g23240 vs. ExPASy Swiss-Prot
Match: Q02283 (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.5e-43 Identity = 105/205 (51.22%), Postives = 134/205 (65.37%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.0e-36 Identity = 105/257 (40.86%), Postives = 142/257 (55.25%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy Swiss-Prot
Match: Q6YWR4 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.0e-36 Identity = 105/257 (40.86%), Postives = 142/257 (55.25%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy Swiss-Prot
Match: Q9XH36 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=HOX5 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.0e-27 Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy Swiss-Prot
Match: Q6ZA74 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX5 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.0e-27 Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. NCBI nr
Match: KAG6602444.1 (Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033127.1 Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 442 bits (1137), Expect = 8.75e-155 Identity = 235/285 (82.46%), Postives = 244/285 (85.61%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. NCBI nr
Match: XP_022959838.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita moschata]) HSP 1 Score: 441 bits (1134), Expect = 2.42e-154 Identity = 234/284 (82.39%), Postives = 243/284 (85.56%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. NCBI nr
Match: XP_023543981.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 417 bits (1072), Expect = 6.67e-145 Identity = 225/277 (81.23%), Postives = 235/277 (84.84%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. NCBI nr
Match: XP_022938616.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita moschata] >KAG6578642.1 Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 399 bits (1026), Expect = 6.71e-138 Identity = 213/282 (75.53%), Postives = 229/282 (81.21%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. NCBI nr
Match: XP_038890996.1 (homeobox-leucine zipper protein HAT5-like [Benincasa hispida] >XP_038890997.1 homeobox-leucine zipper protein HAT5-like [Benincasa hispida] >XP_038890998.1 homeobox-leucine zipper protein HAT5-like [Benincasa hispida]) HSP 1 Score: 399 bits (1024), Expect = 1.40e-137 Identity = 212/285 (74.39%), Postives = 231/285 (81.05%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy TrEMBL
Match: A0A6J1H729 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111460778 PE=4 SV=1) HSP 1 Score: 441 bits (1134), Expect = 1.17e-154 Identity = 234/284 (82.39%), Postives = 243/284 (85.56%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy TrEMBL
Match: A0A6J1FDM9 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111444797 PE=4 SV=1) HSP 1 Score: 399 bits (1026), Expect = 3.25e-138 Identity = 213/282 (75.53%), Postives = 229/282 (81.21%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy TrEMBL
Match: A0A6J1JZ53 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita maxima OX=3661 GN=LOC111489584 PE=4 SV=1) HSP 1 Score: 397 bits (1019), Expect = 3.78e-137 Identity = 210/282 (74.47%), Postives = 229/282 (81.21%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy TrEMBL
Match: A0A5A7T5T2 (Homeobox-leucine zipper protein HAT5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00880 PE=4 SV=1) HSP 1 Score: 393 bits (1010), Expect = 9.17e-136 Identity = 208/285 (72.98%), Postives = 229/285 (80.35%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. ExPASy TrEMBL
Match: A0A1S3C9T9 (homeobox-leucine zipper protein HAT5-like OS=Cucumis melo OX=3656 GN=LOC103498065 PE=4 SV=1) HSP 1 Score: 393 bits (1010), Expect = 9.17e-136 Identity = 208/285 (72.98%), Postives = 229/285 (80.35%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 ) HSP 1 Score: 177.9 bits (450), Expect = 1.1e-44 Identity = 105/205 (51.22%), Postives = 134/205 (65.37%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 ) HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25 Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 ) HSP 1 Score: 113.6 bits (283), Expect = 2.5e-25 Identity = 64/123 (52.03%), Postives = 80/123 (65.04%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 ) HSP 1 Score: 109.8 bits (273), Expect = 3.5e-24 Identity = 69/156 (44.23%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of Cp4.1LG01g23240 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 ) HSP 1 Score: 108.6 bits (270), Expect = 7.9e-24 Identity = 65/145 (44.83%), Postives = 92/145 (63.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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