Cp4.1LG01g23120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g23120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-H2 finger protein ATL46-like
Location	Cp4.1LG01: 19746413 .. 19747528 (-)
RNA-Seq Expression	Cp4.1LG01g23120
Synteny	Cp4.1LG01g23120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCGGATTCGGCATCAAATCTTTCAGAAAGATGGATTTCTGAGCTACCCTCCTCCTATGCCGCCTTCTTCTTCTTCCCCTTTTGATGTAATTTACAATAAGGAACCTACCCCACCAGCAGCGCCATCTGCAACCTCGTCCGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTGATTTTGGCTGTTCTGTTCTTCATTTCTGGTCTGCTCCATCTTCTTGTTAGATTCCTTATAAAGCACCCATCTTCCTCATCCTCCTCTCAATCCAACAGAAACCCAGAACTGTCTCCTTCTGATGCACTTCAAAGACAGCTTCAGCAGCTCTTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGACGCACTTCCTGTTTTTAAGTATAAGGAGATAGTGGGGCTTAAGGAGCCATTTGATTGTGCTGTTTGCTTGTGTGAGTATTCTGAGAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCCTTCCATGTTAATTGTATAGACACTTGGCTCTTGTCGAATTCGACATGCCCTCTTTGTCGAGGAACGTTATTTAACCCTGGTTTCTCGATCGAAAATCCAATGTTCGATTTCGATGAACTGGGAGAAGAAGCTGAATGTGTTGGTAATGCAGATCATAGGTTGCCTAATTGTCAAAAAAGAATGGAGATTCAAGAGGTAGTGAATGAAAAAGGAGGTTTCCCAGTGAAGCTTGGAAAATTCAGAAGAATGAACATAGCTGAGGCTGTAGAGACCGAAGTTGGAGAGACCAGTAGTAGCAACTTGGATGCTAGGAGATGTTACTCAATGGGATCATATCAATACGTTGTTATAGACGCTGAGCTCAGAGTTCCCTTGTCTAGAGCTCAACAAGAGGGTGACCATAAACAGCCCTTCAAAGGTACAGAACCAAAGGGCATTGCAGATTTGGATGGGAAGAAGCTGAATAGTGTAGCTAAAGGAGAGAGTTACTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGCATCTGAGTTCTACTGAGCCGCAGATAGGTATGGATTCTTCTCTTAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATCATAA

mRNA sequence

ATGACTCGGATTCGGCATCAAATCTTTCAGAAAGATGGATTTCTGAGCTACCCTCCTCCTATGCCGCCTTCTTCTTCTTCCCCTTTTGATGTAATTTACAATAAGGAACCTACCCCACCAGCAGCGCCATCTGCAACCTCGTCCGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTGATTTTGGCTGTTCTGTTCTTCATTTCTGGTCTGCTCCATCTTCTTGTTAGATTCCTTATAAAGCACCCATCTTCCTCATCCTCCTCTCAATCCAACAGAAACCCAGAACTGTCTCCTTCTGATGCACTTCAAAGACAGCTTCAGCAGCTCTTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGACGCACTTCCTGTTTTTAAGTATAAGGAGATAGTGGGGCTTAAGGAGCCATTTGATTGTGCTGTTTGCTTGTGTGAGTATTCTGAGAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCCTTCCATGTTAATTGTATAGACACTTGGCTCTTGTCGAATTCGACATGCCCTCTTTGTCGAGGAACGTTATTTAACCCTGGTTTCTCGATCGAAAATCCAATGTTCGATTTCGATGAACTGGGAGAAGAAGCTGAATGTGTTGGTAATGCAGATCATAGGTTGCCTAATTGTCAAAAAAGAATGGAGATTCAAGAGGTAGTGAATGAAAAAGGAGGTTTCCCAGTGAAGCTTGGAAAATTCAGAAGAATGAACATAGCTGAGGCTGTAGAGACCGAAGTTGGAGAGACCAGTAGTAGCAACTTGGATGCTAGGAGATGTTACTCAATGGGATCATATCAATACGTTGTTATAGACGCTGAGCTCAGAGTTCCCTTGTCTAGAGCTCAACAAGAGGGTGACCATAAACAGCCCTTCAAAGGTACAGAACCAAAGGGCATTGCAGATTTGGATGGGAAGAAGCTGAATAGTGTAGCTAAAGGAGAGAGTTACTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGCATCTGAGTTCTACTGAGCCGCAGATAGGTATGGATTCTTCTCTTAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATCATAA

Coding sequence (CDS)

ATGACTCGGATTCGGCATCAAATCTTTCAGAAAGATGGATTTCTGAGCTACCCTCCTCCTATGCCGCCTTCTTCTTCTTCCCCTTTTGATGTAATTTACAATAAGGAACCTACCCCACCAGCAGCGCCATCTGCAACCTCGTCCGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTGATTTTGGCTGTTCTGTTCTTCATTTCTGGTCTGCTCCATCTTCTTGTTAGATTCCTTATAAAGCACCCATCTTCCTCATCCTCCTCTCAATCCAACAGAAACCCAGAACTGTCTCCTTCTGATGCACTTCAAAGACAGCTTCAGCAGCTCTTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGACGCACTTCCTGTTTTTAAGTATAAGGAGATAGTGGGGCTTAAGGAGCCATTTGATTGTGCTGTTTGCTTGTGTGAGTATTCTGAGAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCCTTCCATGTTAATTGTATAGACACTTGGCTCTTGTCGAATTCGACATGCCCTCTTTGTCGAGGAACGTTATTTAACCCTGGTTTCTCGATCGAAAATCCAATGTTCGATTTCGATGAACTGGGAGAAGAAGCTGAATGTGTTGGTAATGCAGATCATAGGTTGCCTAATTGTCAAAAAAGAATGGAGATTCAAGAGGTAGTGAATGAAAAAGGAGGTTTCCCAGTGAAGCTTGGAAAATTCAGAAGAATGAACATAGCTGAGGCTGTAGAGACCGAAGTTGGAGAGACCAGTAGTAGCAACTTGGATGCTAGGAGATGTTACTCAATGGGATCATATCAATACGTTGTTATAGACGCTGAGCTCAGAGTTCCCTTGTCTAGAGCTCAACAAGAGGGTGACCATAAACAGCCCTTCAAAGGTACAGAACCAAAGGGCATTGCAGATTTGGATGGGAAGAAGCTGAATAGTGTAGCTAAAGGAGAGAGTTACTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGCATCTGAGTTCTACTGAGCCGCAGATAGGTATGGATTCTTCTCTTAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATCATAA

Protein sequence

MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFPVKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTDLPWLRQTQGPS

Homology

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 8.1e-117
Identity = 231/384 (60.16%), Postives = 276/384 (71.88%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           M+ +R  I QKDG  +YPPP            Y      P +P   SSG RISPAVLF+I
Sbjct: 1   MSWVRFTIEQKDGNFAYPPP-----------FYKDPILSPPSPPPPSSGNRISPAVLFVI 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPS+++SS+SNR PE+S SDALQRQLQQLFHL+DSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLD 120

Query: 121 QAFIDALPVFKYKEIVG----------LKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVN 180
           QAFIDALPVF YKEIVG           +EPFDCAVCLCE+SEKD+LRLLPMCSHAFH+N
Sbjct: 121 QAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLN 180

Query: 181 CIDTWLLSNSTCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQ 240
           CIDTWL SNSTCPLCRGTLF+PGFS+ENPMFDFD++ E+ E V          QK MEIQ
Sbjct: 181 CIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTE-----NGSQKTMEIQ 240

Query: 241 EVVNEKGGFPVKLGKFRRM-NIAEAVETEV---GETSSSNLDARRCYSMGSYQYVVIDAE 300
           E+V EKG  PV+LGKF+R+ N+      +V   GETSSSNLDARRC+SMGSYQY++ ++E
Sbjct: 241 EIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSE 300

Query: 301 LRVPLSRAQQEGDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSS 360
           L+VP +  +      Q  +  +    +  D KK+N+VAKGES+SVSKIWLW KK K  S 
Sbjct: 301 LKVPFANDRLPRLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKFSSD 360

Query: 361 TEPQIGMDSSLNTD----LPWLRQ 367
            + ++   SSLN D    LPW+ +
Sbjct: 361 AQRRL-PSSSLNVDDLPKLPWMEE 367

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 2.0e-86
Identity = 193/367 (52.59%), Postives = 232/367 (63.22%), Query Frame = 0


Query: 3   RIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFIIVI 62
           RI +   + D      P     SS+P  +  N + T  ++ S++    RISP +LFIIV+
Sbjct: 5   RIHYSQLKNDNLNQISP-----SSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVL 64

Query: 63  LAVLFFISGLLHLLVRFLIKHPS---SSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGL 122
           L+V+FFI  +LHLLVR+ +K      SSS ++SN+NPE S SD  QRQLQQLFHLHDSGL
Sbjct: 65  LSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGL 124

Query: 123 DQAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSN 182
           DQA IDALPVF YKEI G KEPFDCAVCLCE+SE D+LRLLP CSHAFH++CIDTWLLSN
Sbjct: 125 DQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSN 184

Query: 183 STCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGG- 242
           STCPLCRGTLF+ G   E P F+F   G  A   G    R+   QK  E     NE G  
Sbjct: 185 STCPLCRGTLFSLGHQFEYPDFNF---GFFAGDDGGGGVRVSPVQKPAE-----NEIGKR 244

Query: 243 -FPVKLGKFRRMNIAEAVETEV---GETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRA 302
            F V+LGKFR  NI    E  V   GETSSS+LD RRC+SMGSYQY+V +++L V L   
Sbjct: 245 VFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALC-P 304

Query: 303 QQEGDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKK-----GKHLSSTEP 357
             EG           K   D++GKK+N  +KGES+SVSKIW WS K       H S T  
Sbjct: 305 NNEG----------LKNNKDVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNNHPSETNL 347

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-62
Identity = 167/408 (40.93%), Postives = 217/408 (53.19%), Query Frame = 0


Query: 7   QIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFIIVILAVL 66
           Q F     L   PP+   SS+ FD+                  ++ISP++L II+IL+++
Sbjct: 19  QNFLSPSSLPQEPPLSLRSSANFDL-----------------NSKISPSILLIIIILSII 78

Query: 67  FFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDA 126
           FFISGLLHLLVRFL+      + S  +R        ALQ QLQQLFHLHDSG+DQ+FID 
Sbjct: 79  FFISGLLHLLVRFLL------TPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDT 138

Query: 127 LPVFKYKEIVGLKE-PFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLC 186
           LPVF YK I+GLK  PFDCAVCLCE+  +D+LRLLP CSHAFH++CIDTWLLS+STCPLC
Sbjct: 139 LPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLC 198

Query: 187 RGTLFNPGFSIENPMFDF------------DELG---EEAEC----------------VG 246
           R +L +   S ++P   F             E+G   + A C                VG
Sbjct: 199 RSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVG 258

Query: 247 NADHRLPNCQKRMEIQEVVNEKGG-------FPVKLGKFRRMNIAEAVETEVGETSSSNL 306
           N D            Q +  E GG       F VKLGKFR ++I E   +     +SS+L
Sbjct: 259 NNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSSL 318

Query: 307 DARRCYSMGSYQYVV-IDAELRVPLSRAQQEG------DHKQPFK--GTEPKGIADLDGK 358
           D RRC+SMGSY+Y++  +  L+V +S  +Q         H+      G +P G     G 
Sbjct: 319 DERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSGS 378

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 8.0e-56
Identity = 144/354 (40.68%), Postives = 202/354 (57.06%), Query Frame = 0


Query: 32  IYNKEPTPPAAP-----SATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSS 91
           + +  P PP  P     S ++  ++I+P +L II+IL+++FFISGLLH+LV+FL+     
Sbjct: 14  LISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLL----- 73

Query: 92  SSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEIVGLK-EPFDCA 151
            + S+ +R        ALQ QLQQLF+LHDSG+DQ+ ID LPVF YK IVGLK  PFDC 
Sbjct: 74  -TPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCP 133

Query: 152 VCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPM----- 211
           VCLCE+  +D+LRLLP CSHAFHV CIDTWLLS+STCPLCR  L + GFS  + +     
Sbjct: 134 VCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS-GFSSHHNLSSSYL 193

Query: 212 --FDFDELGEEAECVGNADHRL-----------------PNCQKRMEIQEVVNEKGGFPV 271
              + ++   +   V  ++ +L                  +C    ++  +  +     V
Sbjct: 194 LVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEV 253

Query: 272 KLGKFRRM-NIAEAVETEVGETS--SSNLDARRCYSMGSYQYVV-IDAELRVPLSRAQQE 331
           KLGKFR + ++ E  + +    S  S N+D RRC SMGSY+Y++  +A L+V +S  +  
Sbjct: 254 KLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLS 313

Query: 332 GDHKQPFK-------GTEP--KGIADLDGKKLNSVAKGESYSVSKIWLWSKKGK 343
           G  + P         G +P  KGI         SV + ES+S+SKIWL  KK K
Sbjct: 314 GKDRVPSHRTVMSECGFDPTVKGIE-------KSVVERESFSLSKIWLRGKKEK 353

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy Swiss-Prot
Match: Q7X843 (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 5.6e-41
Identity = 111/279 (39.78%), Postives = 156/279 (55.91%), Query Frame = 0


Query: 32  IYNKEPTPPAAPSATS---------SGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIK 91
           I+  E   P + SA +         S + I   +  +I  LA++    G+L+L+ +FL K
Sbjct: 87  IHETEALSPKSSSAATLTLMNQKDPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFLRK 146

Query: 92  HPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEI-VGLKEP 151
             +       N NP+L    +   QLQ LF LHDSGLDQ  IDALPVF Y  + + L++P
Sbjct: 147 SSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQP 206

Query: 152 FDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPMF 211
           FDCAVCL E+S+ D+LRLLP+CSHAFH++CIDTWLLSNSTCPLCR +L     S  N  +
Sbjct: 207 FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL-----STSNVCY 266

Query: 212 DFDE-LGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFPVKLGKFRRMNIAEAVETEVG 271
           +  E L          D    +  KR+           F V+LG+F+  N +++   +V 
Sbjct: 267 NHSETLVAPLSGHQQVDDGKASLAKRV-----------FSVRLGRFKSTNESQSQRHDVK 326

Query: 272 ETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGD 300
           +     +  RRCYSMG+ QY+V D +  V LS + +EG+
Sbjct: 327 DEIGVRM-PRRCYSMGTQQYLVCDQDFVVALSSSPREGN 346

[Close]

BLAST of Cp4.1LG01g23120 vs. NCBI nr
Match: XP_023552085.1 (RING-H2 finger protein ATL46-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 751 bits (1938), Expect = 1.36e-273
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD
Sbjct: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 371
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 371

[Close]

BLAST of Cp4.1LG01g23120 vs. NCBI nr
Match: XP_022923642.1 (RING-H2 finger protein ATL46-like [Cucurbita moschata])

HSP 1 Score: 746 bits (1925), Expect = 1.31e-271
Identity = 368/371 (99.19%), Postives = 370/371 (99.73%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPA PSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDF+ELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD
Sbjct: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 371
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 371

[Close]

BLAST of Cp4.1LG01g23120 vs. NCBI nr
Match: KAG6602449.1 (RING-H2 finger protein ATL46, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033132.1 RING-H2 finger protein ATL46, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 743 bits (1919), Expect = 1.07e-270
Identity = 367/371 (98.92%), Postives = 369/371 (99.46%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPA PSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDF+ELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQE DH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD
Sbjct: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 371
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 371

[Close]

BLAST of Cp4.1LG01g23120 vs. NCBI nr
Match: XP_022990921.1 (RING-H2 finger protein ATL46-like [Cucurbita maxima])

HSP 1 Score: 737 bits (1902), Expect = 4.04e-268
Identity = 367/371 (98.92%), Postives = 368/371 (99.19%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGT  KGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSST PQIGMDSSLNTD
Sbjct: 301 KQPFKGTA-KGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTLPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 371
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 370

[Close]

BLAST of Cp4.1LG01g23120 vs. NCBI nr
Match: XP_023550828.1 (RING-H2 finger protein ATL46-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 653 bits (1684), Expect = 9.08e-235
Identity = 329/378 (87.04%), Postives = 347/378 (91.80%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           M RIRHQIFQ D FLSYPPP+  SSS+PFD IYNKEP PPA PS TSSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDAFLSYPPPVMTSSSTPFDGIYNKEPNPPAVPSTTSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPS+S SSQSNRNP+LSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSTSPSSQSNRNPQLSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVF+YKEIVGLKEPFDCAVCLCE+SEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPG+SIENPM+DFD+LGEE EC GNAD+RLPNCQK MEIQEVVNEKG FP
Sbjct: 181 TCPLCRGTLFNPGYSIENPMYDFDDLGEEDECGGNADYRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VKLGKFRRMNIAEAVET-EVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGD 300
           V+LGKFRRMN  EAVET EVGETSSSNLDARRCYSMGSYQYVVIDA+LR+ LS+A+ EGD
Sbjct: 241 VRLGKFRRMNAVEAVETTEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGD 300

Query: 301 HKQPFKGTEPKGI----ADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQ--IGM 360
           +KQP KGT+   I    ADLDGKKLNSVAKGESYSVSKIWLWSKKGK+ SSTEP   IGM
Sbjct: 301 NKQPCKGTDSNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPSQPIGM 360

Query: 361 DSSLNTDLPWLRQTQGPS 371
           DSSLNTDLPWLRQTQGPS
Sbjct: 361 DSSLNTDLPWLRQTQGPS 378

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy TrEMBL
Match: A0A6J1E6P3 (RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111431288 PE=4 SV=1)

HSP 1 Score: 746 bits (1925), Expect = 6.33e-272
Identity = 368/371 (99.19%), Postives = 370/371 (99.73%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPA PSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDF+ELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD
Sbjct: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 371
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 371

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy TrEMBL
Match: A0A6J1JPA3 (RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111487667 PE=4 SV=1)

HSP 1 Score: 737 bits (1902), Expect = 1.95e-268
Identity = 367/371 (98.92%), Postives = 368/371 (99.19%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGT  KGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSST PQIGMDSSLNTD
Sbjct: 301 KQPFKGTA-KGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTLPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 371
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 370

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy TrEMBL
Match: A0A5A7T7E5 (RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00820 PE=4 SV=1)

HSP 1 Score: 651 bits (1679), Expect = 2.27e-234
Identity = 326/375 (86.93%), Postives = 343/375 (91.47%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           M RIRHQIFQ DGF SYPPP+  SSS+PFD IYNKEP PPA PS +SSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPSSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVF+YKEIVGLKEPFDCAVCLCE+SEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPM+DFD+LGEE EC GNA+HRLPNCQK MEIQEVVNEKG FP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNAEHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           V+LGKFRRM+ AE VETEVGETSSSNLDARRCYSMGSYQYVVIDA+LR+ LS+A+ EGD+
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPFKGTEPKGI----ADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSS 360
           KQP K  E   I    ADLDGKKL+SVAKGESYSVSKIWLWSKKGK   STEPQIGM SS
Sbjct: 301 KQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKFSGSTEPQIGMPSS 360

Query: 361 LNTDLP-WLRQTQGP 370
           LNTDLP WLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy TrEMBL
Match: A0A1S3C9T4 (RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103498060 PE=4 SV=1)

HSP 1 Score: 651 bits (1679), Expect = 2.27e-234
Identity = 326/375 (86.93%), Postives = 343/375 (91.47%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           M RIRHQIFQ DGF SYPPP+  SSS+PFD IYNKEP PPA PS +SSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPSSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVF+YKEIVGLKEPFDCAVCLCE+SEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPM+DFD+LGEE EC GNA+HRLPNCQK MEIQEVVNEKG FP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNAEHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           V+LGKFRRM+ AE VETEVGETSSSNLDARRCYSMGSYQYVVIDA+LR+ LS+A+ EGD+
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPFKGTEPKGI----ADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSS 360
           KQP K  E   I    ADLDGKKL+SVAKGESYSVSKIWLWSKKGK   STEPQIGM SS
Sbjct: 301 KQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKFSGSTEPQIGMPSS 360

Query: 361 LNTDLP-WLRQTQGP 370
           LNTDLP WLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Cp4.1LG01g23120 vs. ExPASy TrEMBL
Match: A0A6J1C1A7 (RING-H2 finger protein ATL46 OS=Momordica charantia OX=3673 GN=LOC111006517 PE=4 SV=1)

HSP 1 Score: 650 bits (1678), Expect = 3.11e-234
Identity = 327/374 (87.43%), Postives = 341/374 (91.18%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           M  IRHQIFQKDGFLSYPPPM  SSSSPF   YNKEPTPPA+ SATSSGTRISPAVLFII
Sbjct: 1   MAPIRHQIFQKDGFLSYPPPMADSSSSPFVGTYNKEPTPPASSSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVF+YKEIVGLKEPFDCAVCLCE+SEKDQLRLLPMCSHAFH+NCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHINCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDFD+LG+E EC GNAD R P CQK MEIQEVVNEKG FP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDDLGDEDECSGNADRRFPTCQKTMEIQEVVNEKGVFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300
           V+LGKFRRMN AE VETEVGETSSSNLDARRCYSMGSYQYVVIDA+LR+ LS+A++EGD+
Sbjct: 241 VRLGKFRRMNPAEPVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300

Query: 301 KQPFKGTEPKGI----ADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSS 360
           KQ  K  EP  I    ADLDGKKLNSV KGESYSVSKIWLWSKKGK  SSTEPQIGM SS
Sbjct: 301 KQLSKDXEPNSISPVQADLDGKKLNSVVKGESYSVSKIWLWSKKGKFASSTEPQIGMPSS 360

Query: 361 LNTDLPWLRQTQGP 370
           LN DLPWLRQTQGP
Sbjct: 361 LNMDLPWLRQTQGP 374

[Close]

BLAST of Cp4.1LG01g23120 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 421.8 bits (1083), Expect = 5.8e-118
Identity = 231/384 (60.16%), Postives = 276/384 (71.88%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60
           M+ +R  I QKDG  +YPPP            Y      P +P   SSG RISPAVLF+I
Sbjct: 1   MSWVRFTIEQKDGNFAYPPP-----------FYKDPILSPPSPPPPSSGNRISPAVLFVI 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPS+++SS+SNR PE+S SDALQRQLQQLFHL+DSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLD 120

Query: 121 QAFIDALPVFKYKEIVG----------LKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVN 180
           QAFIDALPVF YKEIVG           +EPFDCAVCLCE+SEKD+LRLLPMCSHAFH+N
Sbjct: 121 QAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLN 180

Query: 181 CIDTWLLSNSTCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQ 240
           CIDTWL SNSTCPLCRGTLF+PGFS+ENPMFDFD++ E+ E V          QK MEIQ
Sbjct: 181 CIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTE-----NGSQKTMEIQ 240

Query: 241 EVVNEKGGFPVKLGKFRRM-NIAEAVETEV---GETSSSNLDARRCYSMGSYQYVVIDAE 300
           E+V EKG  PV+LGKF+R+ N+      +V   GETSSSNLDARRC+SMGSYQY++ ++E
Sbjct: 241 EIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGNSE 300

Query: 301 LRVPLSRAQQEGDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSS 360
           L+VP +  +      Q  +  +    +  D KK+N+VAKGES+SVSKIWLW KK K  S 
Sbjct: 301 LKVPFANDRLPRLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKFSSD 360

Query: 361 TEPQIGMDSSLNTD----LPWLRQ 367
            + ++   SSLN D    LPW+ +
Sbjct: 361 AQRRL-PSSSLNVDDLPKLPWMEE 367

[Close]

BLAST of Cp4.1LG01g23120 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-87
Identity = 193/367 (52.59%), Postives = 232/367 (63.22%), Query Frame = 0


Query: 3   RIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFIIVI 62
           RI +   + D      P     SS+P  +  N + T  ++ S++    RISP +LFIIV+
Sbjct: 5   RIHYSQLKNDNLNQISP-----SSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVL 64

Query: 63  LAVLFFISGLLHLLVRFLIKHPS---SSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGL 122
           L+V+FFI  +LHLLVR+ +K      SSS ++SN+NPE S SD  QRQLQQLFHLHDSGL
Sbjct: 65  LSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGL 124

Query: 123 DQAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSN 182
           DQA IDALPVF YKEI G KEPFDCAVCLCE+SE D+LRLLP CSHAFH++CIDTWLLSN
Sbjct: 125 DQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSN 184

Query: 183 STCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGG- 242
           STCPLCRGTLF+ G   E P F+F   G  A   G    R+   QK  E     NE G  
Sbjct: 185 STCPLCRGTLFSLGHQFEYPDFNF---GFFAGDDGGGGVRVSPVQKPAE-----NEIGKR 244

Query: 243 -FPVKLGKFRRMNIAEAVETEV---GETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRA 302
            F V+LGKFR  NI    E  V   GETSSS+LD RRC+SMGSYQY+V +++L V L   
Sbjct: 245 VFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALC-P 304

Query: 303 QQEGDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKK-----GKHLSSTEP 357
             EG           K   D++GKK+N  +KGES+SVSKIW WS K       H S T  
Sbjct: 305 NNEG----------LKNNKDVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNNHPSETNL 347

[Close]

BLAST of Cp4.1LG01g23120 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-63
Identity = 167/408 (40.93%), Postives = 217/408 (53.19%), Query Frame = 0


Query: 7   QIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFIIVILAVL 66
           Q F     L   PP+   SS+ FD+                  ++ISP++L II+IL+++
Sbjct: 19  QNFLSPSSLPQEPPLSLRSSANFDL-----------------NSKISPSILLIIIILSII 78

Query: 67  FFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDA 126
           FFISGLLHLLVRFL+      + S  +R        ALQ QLQQLFHLHDSG+DQ+FID 
Sbjct: 79  FFISGLLHLLVRFLL------TPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDT 138

Query: 127 LPVFKYKEIVGLKE-PFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLC 186
           LPVF YK I+GLK  PFDCAVCLCE+  +D+LRLLP CSHAFH++CIDTWLLS+STCPLC
Sbjct: 139 LPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLC 198

Query: 187 RGTLFNPGFSIENPMFDF------------DELG---EEAEC----------------VG 246
           R +L +   S ++P   F             E+G   + A C                VG
Sbjct: 199 RSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVG 258

Query: 247 NADHRLPNCQKRMEIQEVVNEKGG-------FPVKLGKFRRMNIAEAVETEVGETSSSNL 306
           N D            Q +  E GG       F VKLGKFR ++I E   +     +SS+L
Sbjct: 259 NNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSSL 318

Query: 307 DARRCYSMGSYQYVV-IDAELRVPLSRAQQEG------DHKQPFK--GTEPKGIADLDGK 358
           D RRC+SMGSY+Y++  +  L+V +S  +Q         H+      G +P G     G 
Sbjct: 319 DERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSGS 378

[Close]

BLAST of Cp4.1LG01g23120 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 219.2 bits (557), Expect = 5.7e-57
Identity = 144/354 (40.68%), Postives = 202/354 (57.06%), Query Frame = 0


Query: 32  IYNKEPTPPAAP-----SATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSS 91
           + +  P PP  P     S ++  ++I+P +L II+IL+++FFISGLLH+LV+FL+     
Sbjct: 14  LISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLL----- 73

Query: 92  SSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEIVGLK-EPFDCA 151
            + S+ +R        ALQ QLQQLF+LHDSG+DQ+ ID LPVF YK IVGLK  PFDC 
Sbjct: 74  -TPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCP 133

Query: 152 VCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPM----- 211
           VCLCE+  +D+LRLLP CSHAFHV CIDTWLLS+STCPLCR  L + GFS  + +     
Sbjct: 134 VCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS-GFSSHHNLSSSYL 193

Query: 212 --FDFDELGEEAECVGNADHRL-----------------PNCQKRMEIQEVVNEKGGFPV 271
              + ++   +   V  ++ +L                  +C    ++  +  +     V
Sbjct: 194 LVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEV 253

Query: 272 KLGKFRRM-NIAEAVETEVGETS--SSNLDARRCYSMGSYQYVV-IDAELRVPLSRAQQE 331
           KLGKFR + ++ E  + +    S  S N+D RRC SMGSY+Y++  +A L+V +S  +  
Sbjct: 254 KLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLS 313

Query: 332 GDHKQPFK-------GTEP--KGIADLDGKKLNSVAKGESYSVSKIWLWSKKGK 343
           G  + P         G +P  KGI         SV + ES+S+SKIWL  KK K
Sbjct: 314 GKDRVPSHRTVMSECGFDPTVKGIE-------KSVVERESFSLSKIWLRGKKEK 353

[Close]

BLAST of Cp4.1LG01g23120 vs. TAIR 10
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 169.9 bits (429), Expect = 4.0e-42
Identity = 111/279 (39.78%), Postives = 156/279 (55.91%), Query Frame = 0


Query: 32  IYNKEPTPPAAPSATS---------SGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIK 91
           I+  E   P + SA +         S + I   +  +I  LA++    G+L+L+ +FL K
Sbjct: 87  IHETEALSPKSSSAATLTLMNQKDPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFLRK 146

Query: 92  HPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEI-VGLKEP 151
             +       N NP+L    +   QLQ LF LHDSGLDQ  IDALPVF Y  + + L++P
Sbjct: 147 SSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQP 206

Query: 152 FDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPMF 211
           FDCAVCL E+S+ D+LRLLP+CSHAFH++CIDTWLLSNSTCPLCR +L     S  N  +
Sbjct: 207 FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL-----STSNVCY 266

Query: 212 DFDE-LGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFPVKLGKFRRMNIAEAVETEVG 271
           +  E L          D    +  KR+           F V+LG+F+  N +++   +V 
Sbjct: 267 NHSETLVAPLSGHQQVDDGKASLAKRV-----------FSVRLGRFKSTNESQSQRHDVK 326

Query: 272 ETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGD 300
           +     +  RRCYSMG+ QY+V D +  V LS + +EG+
Sbjct: 327 DEIGVRM-PRRCYSMGTQQYLVCDQDFVVALSSSPREGN 346

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL07	8.1e-117	60.16	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q8GW38	2.0e-86	52.59	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q940Q4	1.5e-62	40.93	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9ZV53	8.0e-56	40.68	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q7X843	5.6e-41	39.78	RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2	[more]

BLAST of Cp4.1LG01g23120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552085.1	1.36e-273	100.00	RING-H2 finger protein ATL46-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923642.1	1.31e-271	99.19	RING-H2 finger protein ATL46-like [Cucurbita moschata]	[more]
KAG6602449.1	1.07e-270	98.92	RING-H2 finger protein ATL46, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022990921.1	4.04e-268	98.92	RING-H2 finger protein ATL46-like [Cucurbita maxima]	[more]
XP_023550828.1	9.08e-235	87.04	RING-H2 finger protein ATL46-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG01g23120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6P3	6.33e-272	99.19	RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111431288 ...	[more]
A0A6J1JPA3	1.95e-268	98.92	RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111487667 PE...	[more]
A0A5A7T7E5	2.27e-234	86.93	RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C9T4	2.27e-234	86.93	RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103498060 PE=4 SV=1	[more]
A0A6J1C1A7	3.11e-234	87.43	RING-H2 finger protein ATL46 OS=Momordica charantia OX=3673 GN=LOC111006517 PE=4...	[more]

BLAST of Cp4.1LG01g23120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40250.1	5.8e-118	60.16	RING/U-box superfamily protein	[more]
AT1G23980.1	1.4e-87	52.59	RING/U-box superfamily protein	[more]
AT4G30400.1	1.1e-63	40.93	RING/U-box superfamily protein	[more]
AT2G18650.1	5.7e-57	40.68	RING/U-box superfamily protein	[more]
AT3G48030.1	4.0e-42	39.78	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 144..185 e-value: 1.4E-6 score: 37.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 143..186 e-value: 1.2E-12 score: 48.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 144..186 score: 12.356501
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 119..191 e-value: 2.1E-21 score: 76.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..371
None	No IPR available	PANTHER	PTHR45768:SF36	RING-H2 FINGER PROTEIN ATL46-LIKE ISOFORM X1	coord: 9..355
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 9..355
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 143..186 e-value: 2.76866E-19 score: 78.4977
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 123..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23120.1	Cp4.1LG01g23120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding