Cp4.1LG01g22870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g22870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	binding partner of ACD11 1
Location	Cp4.1LG01: 19932546 .. 19935512 (-)
RNA-Seq Expression	Cp4.1LG01g22870
Synteny	Cp4.1LG01g22870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGAGCTACAGAGTTAGATGATGCGGGATTCTCTGCCAACAGAAAAACTCCCAAACGGAGAAGATAAGACTTCATTCCACGCCACGCTCCTTCCACCACAATATTCCACACTCCCCAATCCCAATAATTCGTGATTCACACGCGCCCTTCATGCAACTGGAATCGGTTCATCACAAAGTTCAGTACCATCAGCTACCAAAACTGATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAATGTCGGCTAAGTTTTCAGATTTCAGATTTCAGCTCGGCCCCCTCTCGTCTTCTTCTCTCAGAGCTTCTATCAGGTACGCCATAGCCAAACTTCAAACCCTTTTTACTTTTCTGTCGGTTTCCATACTGATTTTCATCATTTATCTCCTCCTTCCATTGTTTTGGCTTATGGGTTTGTTTTAGGTTTTCATTTCAAGATCTGGGTTGTGTCTGTGGATTAACTTTGGCAAAATTCCTCTAATTTTTCATCTTTTTTTGTTGAATTCGAGCTGTTCTTCCTTGTAATTTACCCTGTTTTAGTTACCCCTTTGCTAAACAATTCTGGGACTTCCATATAGAGCTGGGTGGAACAATGTACTCTGGGGGCTATACTGCTGAAGTTACAAGTTTGTCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTCCCATTGTGGCGCGGTGGATCATGTAGAAATCCTCAGGTGAATTCAACATTAATTGAAACTGGGTTTGCTAATCAAAAGCTTTGAAACAATTTTTTTCTTTTGCAATAACAGGTCGGGTGATTATGCGTGTACTGCTTATGTGACTTTCCGTGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGTAAGTTCTTGAGTGTGAGAATTCTCTGTGCTCTTTCATTTTGCAATTGTTGGTTTCTCTGCTTTTTACTTTGTTGTTCATAGATATGTGTAGAGTGCTCATCTACTGGTTCGCTCGCTTGAATTTGTTTCGCCGATGTATGTAAACGCGCAAATACACTCTTTAGGGTGTGCGGAGGAGGAGGAGCCATTTTGTATACGTTGTCATATGGGGTTGTTAGGCATACGTTTGTCGAGTCACCGTCTGGTTAGAGATGCTTACGAATTTATTTGAATCAAATATAGATATAAGACCTTAAGCTTTCATTTTTGGATTGGGAACGAAACATTCCTTATAAGGCTGTGGAAACCTCTCCCTAATAGACGCGTTTTAAACCTATGAAGTTGTCAGTGATTTGTAATGGGACAAAGTGGACAATATCTATTAGCTGTGGACTTAGACTGTTACTAATGGTATTAGAGCCAGACACGGGGCGGTGTTAGAGCGAGGAGGCTGGGCGAAGCATTTCTTATAAGGGTGTGGAAATCTCTCCCTAATAGATGCATTTTAGAACTGTGAGGCTGTCGGCGATATGTAATGGATCAAAGCGGACAATATCTACTTGTAGAAAGTTTTTAGTAGTTGCTTCTTTGTTTGTTTCTTTTTCAACACATTTAAGGAGAGTTGATTACTCAATGTGCAATCACTTAAATTTGCAAGAATTTGTGGGGGTAATCGCCCAAATATACTGCAAGCGGATTTTATCCTCTTTGGGCTTTTCTTCTTGGGCTTTCCCTCAAAGTTTTAAAACACGTCTACTAGGGGAGGTTTCCACAACTTTCTTCAGGGCTCACTACGGGTAGATATTGTCCTCTTTGGGCTTTGCCTCAAGGTTTTAAAACGTGTCCGCTAGTGAGAGCTTTTCACACCCTTGTAAAGAATGTTTCCTTGTGGGGATCTCACAGAATCATTTAAATTATTCCGTTTAGACTTTCAAGCACTCTCATGACATGGCAAGTGGATATATAATCTTGCAACTCTTATAAGTTGTTGATGCCATGCACCCAACAGTTTCTTACACAAAGGTCCCAAGTACTCATCTTCAAGCATCACTTCTGAGCTTTCGTAATGCAGTTCATTTGCTGATTTTGGTGTTCCAGGGGGCTGAAATCTTAGATCAATGTGTGTTCATAGGCCGGTGGGGAACATACACAGATGAATCATACAACTGGAACAACCCTTCACAAATGACCGACGACAATACGAGCCCAATGGTAAGCTAATAACCATCGAATACGAGTTCAAAATCTTTATGTCTCTTAATGACCACTAGATATCGAGTCGAAGTCAACCACGCTCCGTTTATACACAATATTTTGAATTGATCTCTGAAATTTCTGTATGAAAAAAAACAGGTTGCAGAAATCATGCATTCTGCATACACACCAGGGGAGGCTGTAACCGTGGCTCAACAAGTTGTCAAAACAATGCTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGATTCTTGTCAAGTCTCAGCTTCTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGATGCAATTCATACCGGCATGGAAACTGTTAAATACATCGATGAGAAGTATCACGTTTCCGATATCACCCGATCAACTGCAATGGTTACTGGCACGGCGGCCGTGGTGGCAATGGGGGTGGCCGGGAAAGCGGCGATGGCTGCAGGTACGGCTGTAGTAAACAGCAGTTACTTTTCAAAGGGCGCGCTTTGGGTTTCGGATATGTTGAGCCGTGCTTCTAAGGCTGCAGCTGAAGTAGGTACGAGGAACAGTAAAGGAATAACAAAACTTTGAATCAAAACAACTGAAATACATAAATATACTCATGTTTTTTTCTTCTTGTCTGTCACTCAAATTCAGACTCTTGATGTGCAGCTTGGTATGATTATAAGTAATCATTCCCATGGTCTGTAATCTCGCTCGGGTAAATATGGTTGATACATTGTGAAACATTTGAACGATTTGTTCTATGTTGGTCATCGTGTTAAATTGCAAATAAGATCATTCAACTTTCGATTCTAATAGTAATAGGTCTCT

mRNA sequence

CTCAGAGCTACAGAGTTAGATGATGCGGGATTCTCTGCCAACAGAAAAACTCCCAAACGGAGAAGATAAGACTTCATTCCACGCCACGCTCCTTCCACCACAATATTCCACACTCCCCAATCCCAATAATTCGTGATTCACACGCGCCCTTCATGCAACTGGAATCGGTTCATCACAAAGTTCAGTACCATCAGCTACCAAAACTGATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAATGTCGGCTAAGTTTTCAGATTTCAGATTTCAGCTCGGCCCCCTCTCGTCTTCTTCTCTCAGAGCTTCTATCAGGTACGCCATAGCCAAACTTCAAACCCTTTTTACTTTTCTGTCGGTTTCCATACTGATTTTCATCATTTATCTCCTCCTTCCATTGTTTTGGCTTATGGGTTTGTTTTAGGTTTTCATTTCAAGATCTGGGTTGTGTCTGTGGATTAACTTTGGCAAAATTCCTCTAATTTTTCATCTTTTTTTGTTGAATTCGAGCTGTTCTTCCTTGTAATTTACCCTGTTTTAGTTACCCCTTTGCTAAACAATTCTGGGACTTCCATATAGAGCTGGGTGGAACAATGTACTCTGGGGGCTATACTGCTGAAGTTACAAGTTTGTCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTCCCATTGTGGCGCGGTGGATCATGTAGAAATCCTCAGGTCGGGTGATTATGCGTGTACTGCTTATGTGACTTTCCGTGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGGGGCTGAAATCTTAGATCAATGTGTGTTCATAGGCCGGTGGGGAACATACACAGATGAATCATACAACTGGAACAACCCTTCACAAATGACCGACGACAATACGAGCCCAATGGTTGCAGAAATCATGCATTCTGCATACACACCAGGGGAGGCTGTAACCGTGGCTCAACAAGTTGTCAAAACAATGCTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGATTCTTGTCAAGTCTCAGCTTCTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGATGCAATTCATACCGGCATGGAAACTGTTAAATACATCGATGAGAAGTATCACGTTTCCGATATCACCCGATCAACTGCAATGGTTACTGGCACGGCGGCCGTGGTGGCAATGGGGGTGGCCGGGAAAGCGGCGATGGCTGCAGGTACGGCTGTAGTAAACAGCAGTTACTTTTCAAAGGGCGCGCTTTGGGTTTCGGATATGTTGAGCCGTGCTTCTAAGGCTGCAGCTGAAGTAGGTACGAGGAACAGTAAAGGAATAACAAAACTTTGAATCAAAACAACTGAAATACATAAATATACTCATGTTTTTTTCTTCTTGTCTGTCACTCAAATTCAGACTCTTGATGTGCAGCTTGGTATGATTATAAGTAATCATTCCCATGGTCTGTAATCTCGCTCGGGTAAATATGGTTGATACATTGTGAAACATTTGAACGATTTGTTCTATGTTGGTCATCGTGTTAAATTGCAAATAAGATCATTCAACTTTCGATTCTAATAGTAATAGGTCTCT

Coding sequence (CDS)

ATGTACTCTGGGGGCTATACTGCTGAAGTTACAAGTTTGTCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTCCCATTGTGGCGCGGTGGATCATGTAGAAATCCTCAGGTCGGGTGATTATGCGTGTACTGCTTATGTGACTTTCCGTGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGGGGCTGAAATCTTAGATCAATGTGTGTTCATAGGCCGGTGGGGAACATACACAGATGAATCATACAACTGGAACAACCCTTCACAAATGACCGACGACAATACGAGCCCAATGGTTGCAGAAATCATGCATTCTGCATACACACCAGGGGAGGCTGTAACCGTGGCTCAACAAGTTGTCAAAACAATGCTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGATTCTTGTCAAGTCTCAGCTTCTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGATGCAATTCATACCGGCATGGAAACTGTTAAATACATCGATGAGAAGTATCACGTTTCCGATATCACCCGATCAACTGCAATGGTTACTGGCACGGCGGCCGTGGTGGCAATGGGGGTGGCCGGGAAAGCGGCGATGGCTGCAGGTACGGCTGTAGTAAACAGCAGTTACTTTTCAAAGGGCGCGCTTTGGGTTTCGGATATGTTGAGCCGTGCTTCTAAGGCTGCAGCTGAAGTAGGTACGAGGAACAGTAAAGGAATAACAAAACTTTGA

Protein sequence

MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVKYIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSRASKAAAEVGTRNSKGITKL

Homology

[Close]

BLAST of Cp4.1LG01g22870 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.6e-24
Identity = 83/254 (32.68%), Postives = 133/254 (52.36%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           + +V +LS  ATE+D+ +FFS  G V+ ++I +S ++  +AYVTF++    ETA+LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  EILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVAQQVVKT 126
            I DQ V I     Y        +P       T    AE           V  A+ VV +
Sbjct: 67  SIADQSVIIELAPNY--------SPPAAPHAETQSSGAE---------SVVQKAEDVVSS 126

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGM----ETVKYI 186
           ML+KG++L KDA+ KAKAFD+    +++A A V+ L  +IGL+  +  G     E +K +
Sbjct: 127 MLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAV 186

Query: 187 DEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSRAS 246
           D+ + V++ T+S               A +   +AG+AV+ + Y   G  W +   +R +
Sbjct: 187 DQNFQVTERTKS-----------VYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVA 229

Query: 247 KAAAEVGTRNSKGI 257
           +AA EVG +  + +
Sbjct: 247 QAAGEVGQKTKEKV 229

[Close]

BLAST of Cp4.1LG01g22870 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.4e-05
Identity = 62/228 (27.19%), Postives = 98/228 (42.98%), Query Frame = 0


Query: 10  VTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETAILLSGAEIL 69
           VT++SP+ TE  + DFFS CG V ++   +SG+   TA + F    A +TA+LL  A + 
Sbjct: 7   VTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDALLG 66

Query: 70  DQCVFI----GRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVAQQVVK 129
              + I    G   + TD+     + +   +D               P  A      ++ 
Sbjct: 67  QNKIQITSEDGGAASTTDQGGAGGDQAARQEDK--------------PRSA------IIS 126

Query: 130 TMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKV-SELSNRIGLTDAIHTGMETVKYIDE 189
            +LS+GY L+   L K+   D S  VS+     + S LS    + +  H   E    +D 
Sbjct: 127 ELLSRGYHLSDVTLEKSIQLDQSYGVSSKFKGILESALSGVRSVNERYHV-TEKANEVDN 186

Query: 190 KYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGAL 233
           K+ +SD    T+ +  T    A+  A  A  +AG  V N+    K  L
Sbjct: 187 KFAISDKLNRTSSLVSTYFHKALETA--AGTSAGQKVQNAYEDGKNQL 210

[Close]

BLAST of Cp4.1LG01g22870 vs. NCBI nr
Match: XP_023513532.1 (binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo] >XP_023513538.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499 bits (1285), Expect = 7.91e-178
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Cp4.1LG01g22870 vs. NCBI nr
Match: XP_022952477.1 (binding partner of ACD11 1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 497 bits (1280), Expect = 4.57e-177
Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTD+NTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Cp4.1LG01g22870 vs. NCBI nr
Match: XP_022952460.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 497 bits (1280), Expect = 1.90e-176
Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 40  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 99

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTD+NTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 100 ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 159

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 160 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 219

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR
Sbjct: 220 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 279

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 280 ASKAAAEVGTRNSKGITKL 298

[Close]

BLAST of Cp4.1LG01g22870 vs. NCBI nr
Match: XP_022952469.1 (binding partner of ACD11 1-like isoform X2 [Cucurbita moschata] >KAG6602486.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 497 bits (1280), Expect = 2.12e-176
Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 43  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 102

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTD+NTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 103 ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 162

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 163 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 222

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR
Sbjct: 223 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 282

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 283 ASKAAAEVGTRNSKGITKL 301

[Close]

BLAST of Cp4.1LG01g22870 vs. NCBI nr
Match: XP_022991190.1 (binding partner of ACD11 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 491 bits (1265), Expect = 8.85e-175
Identity = 255/259 (98.46%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGY AEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYAAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWN+PSQMT+DNTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNSPSQMTNDNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVS+MLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSNMLSR 240

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Cp4.1LG01g22870 vs. ExPASy TrEMBL
Match: A0A6J1GKI7 (binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455139 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 2.21e-177
Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTD+NTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Cp4.1LG01g22870 vs. ExPASy TrEMBL
Match: A0A6J1GLU2 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455139 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 9.20e-177
Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 40  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 99

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTD+NTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 100 ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 159

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 160 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 219

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR
Sbjct: 220 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 279

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 280 ASKAAAEVGTRNSKGITKL 298

[Close]

BLAST of Cp4.1LG01g22870 vs. ExPASy TrEMBL
Match: A0A6J1GLT3 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455139 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 1.03e-176
Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 43  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 102

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTD+NTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 103 ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 162

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 163 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 222

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR
Sbjct: 223 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 282

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 283 ASKAAAEVGTRNSKGITKL 301

[Close]

BLAST of Cp4.1LG01g22870 vs. ExPASy TrEMBL
Match: A0A6J1JS70 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487859 PE=4 SV=1)

HSP 1 Score: 491 bits (1265), Expect = 4.28e-175
Identity = 255/259 (98.46%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGY AEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYAAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWN+PSQMT+DNTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNSPSQMTNDNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVS+MLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSNMLSR 240

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Cp4.1LG01g22870 vs. ExPASy TrEMBL
Match: A0A6J1JU47 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487859 PE=4 SV=1)

HSP 1 Score: 491 bits (1265), Expect = 2.95e-174
Identity = 255/259 (98.46%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGY AEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 54  MYSGGYAAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 113

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           ILLSGAEILDQCVFIGRWGTYTDESYNWN+PSQMT+DNTSPMVAEIMHSAYTPGEAVTVA
Sbjct: 114 ILLSGAEILDQCVFIGRWGTYTDESYNWNSPSQMTNDNTSPMVAEIMHSAYTPGEAVTVA 173

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK
Sbjct: 174 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 233

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
           YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVS+MLSR
Sbjct: 234 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSNMLSR 293

Query: 241 ASKAAAEVGTRNSKGITKL 259
           ASKAAAEVGTRNSKGITKL
Sbjct: 294 ASKAAAEVGTRNSKGITKL 312

[Close]

BLAST of Cp4.1LG01g22870 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 246.5 bits (628), Expect = 2.3e-65
Identity = 141/249 (56.63%), Postives = 178/249 (71.49%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60
           MY  GY A+VT+LSP+ATE DV+ FFSHCG V+ VEI      A TAYVTFRDA+AL+ A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120
           +LLSGA I+DQ V+I  +G Y  ES   NN  Q  +++ S  V      A +PGEA+TVA
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHES---NNLRQ--EEDYSVTVTRSDAFASSPGEAITVA 120

Query: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180
           QQVV+TML+KGYVL+KDA+ KAKA D+S + S+  A K++E+S+ +GLT  I + ME V+
Sbjct: 121 QQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVR 180

Query: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240
             DEKYH SD T+S  +VTGTAAV A  + GK A AA T+VVNS YF+ GALW SD L R
Sbjct: 181 SADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGR 240

Query: 241 ASKAAAEVG 250
           A+KAAA +G
Sbjct: 241 AAKAAAHIG 244

[Close]

BLAST of Cp4.1LG01g22870 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 236.9 bits (603), Expect = 1.8e-62
Identity = 133/251 (52.99%), Postives = 172/251 (68.53%), Query Frame = 0


Query: 5   GYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETAILLS 64
           GY  EVT LSP  T ND+ DFFS  G +  ++I+RSG+ ACTAYV F+D+++ ETA+LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 65  GAEILDQCVFIGRWGTYTDESYNWNNPSQ-MTDDNTSPMVAEIMHSAYTPGEAVTVAQQV 124
           GA ILDQ V I RWG + +E   WN  S+   D++ S   A+   S +  GEAVT AQ+V
Sbjct: 66  GATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQ--RSEFNAGEAVTKAQEV 125

Query: 125 VKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVKYID 184
           VK ML+ G+VL KDAL KAKAFD+S  VSA+A A+VS+L  RIGLTD I TG+E V+  D
Sbjct: 126 VKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTD 185

Query: 185 EKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSRASK 244
           ++YHVSD  +S    T           G+ A AA T+VVNSSYFS GALW+S  L RA+K
Sbjct: 186 QRYHVSDTAKSAVFAT-----------GRTAAAAATSVVNSSYFSSGALWLSGALERAAK 243

Query: 245 AAAEVGTRNSK 255
           AA+++GTR S+
Sbjct: 246 AASDLGTRGSR 243

[Close]

BLAST of Cp4.1LG01g22870 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 128.3 bits (321), Expect = 9.2e-30
Identity = 87/251 (34.66%), Postives = 138/251 (54.98%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           T +V+++S  AT+ D+ +FFS  G + ++E     +    AYVTF+D    ETA+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  EILDQCVFIGRWGTY--TDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVAQQVV 126
            I+D  V +     Y  + E+     P    D N SP   +           +  A+ VV
Sbjct: 65  TIVDSSVIVSMAPDYQLSPEALASLEPK---DSNKSPKAGD---------SVLRKAEDVV 124

Query: 127 KTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGM----ETVK 186
            +ML+KG++L KDA+ KAK+ D+  Q++++A+AKV+    +IG TD I+TG     E V+
Sbjct: 125 SSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVR 184

Query: 187 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 246
            +D+KY VS+ T+S           A+  A +    AG+A++ + Y   GA WV+   ++
Sbjct: 185 EVDQKYQVSEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNK 232

Query: 247 ASKAAAEVGTR 252
            +KAA EVG +
Sbjct: 245 VAKAAEEVGQK 232

[Close]

BLAST of Cp4.1LG01g22870 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.1e-29
Identity = 89/254 (35.04%), Postives = 142/254 (55.91%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           T +V+++S +ATE D+ +FFS  G + ++E     D +  AYVTF+D    ETA+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  EILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPM--VAEIMHSAYTPGEAVTV---AQ 126
            I+D  V +     Y           Q+  D  + +  + E   S+    E V+V   A+
Sbjct: 65  TIVDSSVTVTMSPDY-----------QLPPDALASIESLKESNKSSSPTREDVSVFRKAE 124

Query: 127 QVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTG----ME 186
            VV  M+SKG+VL KDA+ KAK+ D+  Q++++A+A+V+    RIG T+ I+TG     E
Sbjct: 125 DVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSE 184

Query: 187 TVKYIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDM 246
            VK +D+K+ V++ T+S           A+  A +    AG+A++ + Y   GA WV+  
Sbjct: 185 KVKEVDQKFQVTEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGA 236

Query: 247 LSRASKAAAEVGTR 252
            +R SKAA EVG +
Sbjct: 245 FNRVSKAAEEVGQK 236

[Close]

BLAST of Cp4.1LG01g22870 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 122.5 bits (306), Expect = 5.1e-28
Identity = 90/258 (34.88%), Postives = 136/258 (52.71%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           + +V ++S  ATE ++++FFS  G ++H+EI +    +  A+VTF D  ALE A+LLSGA
Sbjct: 6   SVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSGA 65

Query: 67  EILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPM-VAEIMHSAYTPGEA-----VTVA 126
            I+DQ V I R   Y               DN  P+ + E      T  +      V+ A
Sbjct: 66  TIVDQIVTITRAENYVQRR---ETQEVRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKA 125

Query: 127 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGM---- 186
           Q VV T+L+KG  L +DA+ KAKAFD+  Q+ A+A+AKVS    R+GLT+ +  G+    
Sbjct: 126 QDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAVN 185

Query: 187 ETVKYIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSD 246
           E VK +D+K  VSD T           + A+  A +     G+AV +S Y + GA W S 
Sbjct: 186 EKVKSVDQKLQVSDKT-----------MAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSG 245

Query: 247 MLSRASKAAAEVGTRNSK 255
             S+ ++     G++  +
Sbjct: 246 AFSKVARVGQVAGSKTKE 249

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g22870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	5.6e-24	32.68	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	3.4e-05	27.19	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Cp4.1LG01g22870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513532.1	7.91e-178	100.00	binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo] >XP_023513538.1 bin...	[more]
XP_022952477.1	4.57e-177	99.61	binding partner of ACD11 1-like isoform X3 [Cucurbita moschata]	[more]
XP_022952460.1	1.90e-176	99.61	binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022952469.1	2.12e-176	99.61	binding partner of ACD11 1-like isoform X2 [Cucurbita moschata] >KAG6602486.1 Bi...	[more]
XP_022991190.1	8.85e-175	98.46	binding partner of ACD11 1-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g22870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GKI7	2.21e-177	99.61	binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GLU2	9.20e-177	99.61	binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GLT3	1.03e-176	99.61	binding partner of ACD11 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JS70	4.28e-175	98.46	binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JU47	2.95e-174	98.46	binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Cp4.1LG01g22870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01210.1	2.3e-65	56.63	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G14340.1	1.8e-62	52.99	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	9.2e-30	34.66	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.1e-29	35.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G32450.1	5.1e-28	34.88	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..76 e-value: 9.5E-6 score: 35.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..70 e-value: 5.3E-7 score: 29.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..77 score: 9.098089
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 6..75 e-value: 6.8E-9 score: 37.5
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..254
None	No IPR available	PANTHER	PTHR32343:SF16	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..254
IPR034360	Vip1-like, RNA recognition motif, plant	CDD	cd12269	RRM_Vip1_like	coord: 9..75 e-value: 2.65062E-32 score: 111.383
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 9..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g22870.1	Cp4.1LG01g22870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding