Cp4.1LG01g22190 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g22190
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description6-phosphogluconate dehydrogenase
LocationCp4.1LG01: 20311093 .. 20321927 (-)
RNA-Seq ExpressionCp4.1LG01g22190
SyntenyCp4.1LG01g22190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCAAAACATCATATGCCTCTGCAATCAGCTGCATATCACCATATTCTATGCCATTGTGGATCATCTTGACGAAGTTACCCGATCCGCCTTTGCCGATGTACGTTACACAGGGACCGCTATCGGGAACTTGGGCTGCAACCTTAATAAGAATGTCTTCAATGTGCTTGAAGGCCTCAAAAGATCCACCAGGCATCAAGGAAGGACCATTCCTAGCACCTTCTTCACCCCCTGAAACTCCCATTCCGAGGTAGAGCAGGCCTAACTCAGCCATGGCTTTCTCTCTTCTCTCAGTGTTCTCATACCATTCATTACCACCATCAATTATGCAGTCACCTTTCTCCAAGTAAACAGAGAGGGTCTTAATGGTTTGATCAACGGGTGCCCCGGCCTTGACAAGCATGATTATGACACGAGGTTTTTGAATGGATTGAACAAAGGATTCAGGATCATGGAAACCATAGAGAGGAAGATCTCCTTCTGCTTTAGCTCGTTCAACTGTTTCATCTACTTTGGAGGTTGTTCGGTTATATACTGAAATAGGGAAGCCTTTTTCTGCAATGTTTAGAGCCAGGTTTTGACCCATAACAGCCAGACCAGCAAGGCCAATCCTTGTAGGTTTTGCAGGAGCAGCCATGGTTTTACCTATCTCGCATTCAAGATTCATATTAGAACTTGGAATATATAGTTCGCTACAGATCCAAAAGAAGATGACAAAAACCATTGTGCATATTAAAGGTTAAAGCATGATAAAAAAGTTAAAGCATGATCAAGAATCTTCTTTGTGCATATTAAAGGCAGATCATCAGTAGATCATATAAAAAGCATAAGAATTAGCACCATCTGTAACTTGTAAATCATTGTTGAAACCAAACAAAAAATTCAGAGCAAGAGAGATAAATAGCTAAAAAATGAGGGAAGGGACTATAATCTTAAGCTCCTGATCTTCTCTTTAAATTCTCAAAATCAAAGCAACAGAAATGGAAGTTAGAATTCAAGGAGTTGCATAGCGAGTGGGCAGAGACAAATCGAACCAGGAGGGGGGGGGGGGGGGGGGGGGNTAGCGGGCACAATGAAGATGGCAGTTCAATAAAAACCCAGAAGAAATCAAACCTGAAAATTTTCTCTGGATCGAGAAAGAAAGAGGCAAATCCGAGGAAAATAGAGATCTGGGGTTGTGAAAGAGGCGATCAAATGAAATGGGTGTTAAAGAGAATTGAAGATATCACCACAGGTCCATATGAACTCGCTATATAGACCTTTTTCCGGTCAAAATTGGAGACTCGCCAATGGAGAAATTGACCCATAAAATAAGAAAAATGAAAAACAAAAAGCAGCCTTCGCCAGAGCAGAGGCATTGGTAGGTGGACAATATTTGAACAGAGAATTATCAGTTTTTGCGAAGTTAGGTGAGCCTTTCGCCATGGATTTGGATTCACATAGTTTGAACTTGCATAGCAATGTAGATTTGATTTACAATAAATGATCAGATTCGTTTATAACTTCTTAACCTAAATCATGATGTATTTTCTTTTTCTAGATACAAAGAAGCCAAAATGGAGTGCCTCTAGAAATGTCAAATAAGGTGACTGTTTTTCTTATACTTGTTACATTTAAATTGAATATTAGATCTAAACTAATATAGTTTTAACTATGAATCATGAAAATTATATACTTTTAAAGTAAATAATAATAATAATAACACTATTTTTTTTTATATGAAGGCGGGGAGGAGGGGCGTCAACAGTTGATTCATTTCCGTGTGGAGATGGTGGCGAGCAAGCATCATCAAAATCCCATTTAATCAATTTCCCACTTCTAATCTGCGCATTTTCAGGTATGAATCTCCCTCTCTGGTCAATGTCTTGGAAAAGCATTTAGATCTCCATGTTGTTTTTGGAACGATTCTTGAAAGAAAGCTTGTTCTGATATTGGGTGTTCGTCGGATTTTGAAATCTTGCTCTTTCAGATTCCTTTTCCGACTCTTTTCTCATATTTTTCTTCTCAACCCAATAGATTAATCGAAGAATGTTTGTTGTTGTTGTTGTTGTTGTTTATGAATTCTCTGCTTTGAAGTTACGTGCTAAGTCTTTTTAGGGCTGGAGTTTAAGGATCGATGTGGTTGTTAGAACTCTTTTGATTCAATGCACTTTTATGAAGTTATGCATTCATTTGTGGTGTTCATTGCAAGTTCTTGATCGCCTTAGGTAAGTCACAAGCTAGTTCTTAGTACTGAAACTATAAATTAGTGGATTAGCGTAAATGGAGCAAGTAATTTCTCCTTAGAATGTAGAATTTGTAGGGTGTAGACATACATTCTAAACTTGTGATTTTGGAGCTTATCATAACAAAGAAAAAATAAATGGGCTATGTCCCATCACATTGATAGATTATAAATCGAGCAATGCCAATCAAACAAATAAACAAATTATATCACAGATTATTCATCTTGACAAGAAATTGTCTATATGATAAGATATGTATCACAAGCGAAGGGCCATAGTTCAGTTGGTAGAGCACCCCGTTTACATGCGCCAATGTTTTTCAGAGAAGTACATGTAATAAAGAAAATGGCATGACTGCTAGTCTGTTGAGTTCTTGCTCAGACCGTGAACCACTGAATACTTCGGTCTCCTCTTGTCTCGAGTTTGCCCAAGTAGTCCCACTTTACTAGCTCAAATAGTCCCACATAAATAGTGCAGAGGATTATGAAAAAAAATCTTCTTTAGGAAGGAAATGGGCTTATCTCCTCAATCTGTTTGTGCTCAGATCTTTGGAGCACAACTAGAATTGGCTGGTTTTCTTTTTATTTTGTCCGCTGTTATCGAATCTACATGTTCCTATAACATCTGAGTTTATAGGATTAACAGTTGTACAATATCAGAATTCAGCACTGATTTATATTTTTGGAAATTGGCAGAAGATGTTGAAGAATGTGTAGGAAAGAAACAAAAGGTGAAAAGGTTCTGTTGTATGAAAAATCATAGAAGGAAAAGAGAGGTCGTTTATCAAGGGTCAACAGAGGAGTACTCTGGGTCCTATGTAGATGTTTTTGACACTTATTTCTCTGGTCTATTCACAAACATGAAAGCTTGCAAAAAGCTGTTAGCGCTAGCAGTGCTCAAAATTTCATTGGATATCTTTCTTGTTCAGTACACTCAACATCATGACTACTACTTTCTTCACGGCACAATATGAACCTTAATCACAGTTGGTTATTTCTGTTGTAAGTCGACCGCTATTTTTTCTTATTGTTTCATAGAGAGTTACAGTCGAGGGAGAAAGACACACTAAATCTAAATACCCTAGATACTAGGAAATTCTAATCTAAATAATAACCTCTAGATACAAATAGATCTGCAAGGAGCTAAACGAAGAGATAAGGTAGTTGCAAAAAGATTTGGAAAATCCATTTCAAGAGGAAGCGAATAGGACAAAACCATGCCATTAACCCTACTAAAGCCCCTTAATATCATTAAACACTCTTCTCACCAGCCACTCCACTCAAATAAGATACCAAATTGTGGTGAGCCAAAGAACCGTTGTTTGTCCTGTATTTGTTATTTGCATATCATAAATTGTTTCTCATTAGTTTTTAGAACTATATTTGAAATAGGATTATGAGGTATCTCTCAATGTATTTCCGTATGGAGCAAGTTTAGAAGTACTAAGCTGTCTTTGATACCAAAAGTAAAAATCATAATTAAGCATTAATTAACGAAAATGCTCAAACAGAAGTTGTAGCAGTTTTTCTTCACGTGCATGAAGCTACAGGCTTAATGGAGGAAAAGACTGGAGACAGAAGAACCATAAATGGAGAATGGAAATGGAAAAAATTTCCTCCTCACCCTGGCTTATCTATACAATCTATTATAAGACCGGTGCAGTCTCAGCTCTCAGATGGCGTGTTGGGGGTAATGTCTTCAATTTCTCTGAAGTTGGGGTAAGGACTATTGACCTGTAGTTCTGTGAGCATTTGACGGAGTTTGGAAGTCTGCTCCTTGAGTTGAGCATTTTCTTGAACAACCTTGTCATGGCAGTCTGAAACTTGGTTCAGCTTATCGATAAGCTGATGATTCTCATTCCGAAGCCAAACTACTTGAGACCATAACTCATCCAGATGCTTCTGCTTGCGCATACGTGACCGGCGTGCAGACTCTCTATTGGATATCATCCTTCTCTGCTTCCTCTCATTAATGAGGCTTTGTTGTTGCTCATCTGCTTCATCAGAAGTTGAATAGCTACTCAAGCATGGATGCCGATTAAAATCTTGAATTTGAGTAGTTCCTTGGAAATTATGTAAGGGATTTGAGAATTGGTTAAGTTGCACCATAGGTAGGTTGTTCTGAGTCATGGGAAAATTATTGGCATATGCGGATAAATTGGAGGGGATGAGATATTGGAGACCTGTGACTTCACCAGGCTGCATTTTTCAGGGATTGTTGAAAGCTTGCTTGGGTATTGGAAGGGAAGAAGCCTATGTTTAAGGAGAGTGGGAAGCTTGGTGGTGAAGGTGCTTTATAGCACATAAAAGGTTCCAATGGCCCACTTTCAGGAACATGGAGTGATTTTGAGAAAGTTTCTCAGAGCTTGAATCTCTGGAATACCATGCAGACCATGTCTATATCCTATTATGGCACTGCTGCTTTTTTTTTCATGTCACGAGAACGTCCAGGTACTCTACTATATCCGTGTATCTTCCTTCTCGTTATGGCTACTCCATATATGTATGTGTTTGTGATATAAGCATGATTCAATACATGAGAATTGATTGTGTTTGCGATAATAATTTTCATAGCATGTCTTGCTTACATCAGAGAAAGCAACATATTGTGAAGTATAATTATTATTATGGTAGAATGATTAGGAAAAGAAGCGCGGTACATTAAAGTATGTCGAGAAGTTGATATGAAATGAAAAAAGAAAGAATAAATCTCTTGTAGACAATTCAATCTAGTGATGTAAGCAAAGGGAAGATGGACAAGGCAAGCAAAGCCCTTTTTCACATCCCTATTCAGGAGCTAGTATTTTTGGTCCACTTGCTCCCTGAATCTCATAGCTGAGATTGAGCCAATCATAGCACTAAAGGGAGGTTATAGGTAGGTCTTTTTCTTCTTGGTGCTGAATCGTAAAGGTTTGGAGCAAAACAATGCTCTTAATATGATTTTACCATCTTATCCTTTTGGGATAAAACTGTAGGAATGAAAATTGATCCTGATGCCATCTCTTACCTGATACTGTTCCCCCTTCATGTGCATTTTGGTTGTATTTTAGTGCAATTTGATCCAATCATTTATACTTATCCTAGAAATTTCAGAGCAATAAATAAAGATAATGGCCACAATTTTAAATGCATACTAAACCTTCTCCCACCTTCCCACAAAAAGATAGAAAAGGAGAAAGAAGAGGAGGAGGGAGGATATCACTACAAAGGCAGAAGTAGCTGAAAAAACTTCAATTTTCAAGGCACTAACTATCATATTATATTAAGTTTTTAAAAGATAGATAAGCAGAGGCTTATTTATTGTGTCTATGAAAAGGACTAGATTTGAAAACACTGCTGAGAGAAACAGAATGCTCAAGTATTTATTGTGTCTCAGATTACTCCTTAAACAATTAGAAAAAGGCCAATATTTTCTAACCACTGCTCTCTTACCGTGGCCTAATGTATATTTGTTTAGCACAATGAAAACTACTGCGACCTCAACATGAGGACAAAATTTTAAAGTTGAGGTGAAAGGAGGCACTTTTCTGTAATTAATATCTTTGGCTTCTTTATCCATAGAGAGGCTATACATTCATGCTCTTTGATTGTATGAAAGTAGTAAATATTGCATTGTCTTCTCAAAATATATAGGAAATTTTACATGATATATGAATTCCCAAAGTTGATAGAGATCTAGACACTAAGGTAACCTCAATGTCGTCCCTCATCATAATAGTCCTAGTCGATTTAAACTTTGTCACGTAAAAGTTGTCGACACCCCGGCACTGCTTTGTATAAATCTTTTATGATGATATTGTTGACTTGATGATTTTTGAAAAATAAGATTTTTACTCATAAACTCTAACCGTAGTTCATCACTTAGTCTTGTTGTTTCAATCGTTGTCAAGTTTTGTGGTCCGAGCAAGGGACGCTAGACGCCAGAGTTGCTCAATGTCGAGCTGCCAAAAAATTAATGGCCAACCATGTATGATTGCTTCAATCAAGCATGTTATTTTTAAAATCTGGTCAAATCTGAGCTTGTTGGTGGAACTGGGGTCGCATTTTTTTAGCTGCTAAAAGACATAGAGAGTAGCTGAGGTCCTAACCACACTCAACTCAGCAAGGTAAAAAGTTGCTTTCAGAGTGGAAAAGCTTGTCTGATTTGTGTAAGGAATAGCTACACTCGCAAGTAATTGTGTACTTGCTTTGAAAGTTAGTCTTCCACTTAATAAAGAGATTTTCTCTGAATCATGTAATACCACAATCTTTACTGGAGAAAAGAAAACTTAAAAAAAAAATTCTGCTTCCCCACATCTTGAGGCTCTTGTCTGATTGAGTGGACTGCTTAGTCAACATTGTCATTACAAAGATTTTGACCATGATCTTTCTTTCTGTCTCTTTCTCTCTCCTTCACTCACTTGTGAGTGTCCTGAGATTTGTGTAGGACGTTGATAGATCTGTAGGGAAGTACAGATTTCAGTATGTTTTCTTGTCCAATTGTATCAGAAACTTCACTGCTGGTTTGTCATTTTTGCAATTGTACTTGTAGTGTACATCATGTGGATATTTACATACGATGTTGTCCTATGGAGTGGTACTCAATAGTTTTATCATGTCCTTTGCCTTTTAAACGAATTCGTAAACTTTGGTACAACTTTAAAGTAAAGGAAAGAAGTCAACGTAAATATAGTTCACTTGGTTAAGACATAAATCCTCGACTAGGAAGTTAGAGGTTCGAGTCACCACCCCAATTAAGGGTGAACTTGAGAAGACTTTGGAAGATGAAAAATGTTCTTCGTTGACAGTGTCCGATTAGATATTTGACTTATGGCTTTAATCAACTTGAGATAAGTCAATCTACACATCAAATATACACTCAACTTATAACTTAAGATAAACCTAACACCCCAACACAACCGTATAATGTTACAAAATTTAAAAAACTCACAATCTGACCTAACTAAATGATTCAACCCATTAGGAGCTTTTTAATCTCACTAAAAGCTAACATCAAGTAAATATACATAAAACTTATTTATCAACCTTCCTTTTCTTCTTTTCCCCTGTACTCTTTGAAACTTTAAGAACCAATTGTGTGTGGAATAATATATATTTTCTGAAAAGTACTTGGACTGATGCATTATATACAAAGTGAAAAGAAACTGATTGGGAAATAAAATTATGTTAAGAAAGATGATGGAGTAAGCAAAGGAAGTAGGGAAAAAAAAGAAAGCCAAACAAATAGAAAGATAAAGACAATAGAGAGAGGGAGAGGGTGATGATAGGTGACAATTTGTGGGACAAAGTGCGCGTGGGTTAGTGCCACCACCCTCTATATCTTGCCCTCCTATTGCTCATCTTGTCAATTCAAGCTTTCTTTTTTGAAAAGAATTCTATAGAGAGAGAGAGAGCCAAAAAATATTGGTATATCAAAATGGGTAACTTTTCATTGCACCCCATTAAAGCAACCTCAATGTATGTATTTGTTGAATGGCATTTGGTGATGTTCTTTCTCTTTCTCTCTCTCAATACAAATTCTTGTGGTGGGTGTCCTTTTAAGTATAGGATAGAGTCCAAAATGTACATTATTGGAGCTTTGTTGGCTAGTATAATTTGATGATTAATTTAGATAGAAAGAGAGAGGAAAATGCCCAAATCATCTTTATTGTGGCTGTCTTATTTAGATGCTTGTTGGCTTTCTATTCCTTCAAATTGATCCAATAGTGTTCATCTTACAAATCACCAATTTTCTTTGCTTTTTTCCTCTTTCACAAACCATCTTTAACCATTTCTTTTTCAGCCCATTCCCTCTCATATACTTTAGTGAGGAAAAAGAATACAAGAGGATGATTTGTTATTGGAAAATTCAACAAGGTGAATGAACATTTGAGTGTGTTCTTGAAGAATTTTCCTCTAATTATAATCATTTATTGAACTGTAGTAGTTTTTGTGTTACAGAAGTTTCCTCTATTGAACGCTGTTCTTTTGGGGCACAAATGGGTGGTCTTAAATGAGTTCAGGGTGGCTGTGTGCCTTTTTAAAAGGGTGGCTGATTGGCTCTCGAAAATGCTGTGGCTTGAAAGGAAAAGGTTTTATGGAGATGTGCTACTCGCACTCGACTGTACAATCTTTGGAAAGAAAAGAATCAATCAGTCATCAAAGAAAAAGCAGTCTTCTTTTTGGCTTTGATGGTTTACAAACCACACAAATTCTTCTGTAGTTATAGGCTTTTTGATGATTATTAACGATTGGAAGACTCGTGTTTTAGTTCTTTGAGTATGATTCTCTCTACCTGACTCGTATGTTGTTCTTAGGTTGTTTTTCGATTCTTCGATGAATATACATCTTTTGTGCCAAAATTTTGTGAAACATGTCTCAATTTTGTTCTTTAAGCATTAGAATTTCTCTTTTGTGCCCATCGTTTTCTTGCATCTAATGGATTAACTCATTGATGTAATAAATTATGAACTTTTATGTGATTTTTTCCATATTAGAATGTGCAATGAATGTATGTGCTTTTAATTCATGATGTTGAGAAGTGCATTTAAAGGAGTGGTAGAGCATTTTTTTTTTAATTCGGATTAAGACAATCACTTAGGACATTTCTTTTGCTCACCAAAGCTTGGATTAAGATCCTAATCCACTACTGATTTTGAGGATAACTACAATAACACTTGGGCAACTTTTGACATGATAGCTACCACTTCATCTTCTTGCCCAGGTTTCTTATGGAGTTTTAGAGGTTTTTATTCCACATATCTTTACAATCTATTTGAACCTCAAGTGAAAAATAATGGTGTAAATTTCGAGTTTATTAACATTTAACACCGGTTTTTTTATGGGTTTGCTTCTTAAACTTGTCAAGGTTCATCCTTATGAGAGTTCCAATTTCGTTTAAACTTGAAGTTAATACAAGTTCTCGATTTCTCTCATTGAGTTCCTAAGAGATGATTTCATTTAATTTTCTAAAGTTTTATTGATGTCATGATCCCTAGATCCAAGAAAATCTTTACAACAATATCTTACGCTATTGAAGTTTTGTGAAAGGCCCATCTACCTACGCTCATATGCAATACTCTAAAAGAGGATCGATCATTTCAGTCTATAAATAACACTCATCTAGAGGGATCATGCCATATTGTAGCATTATTGCATTAATTCTCACTTTCACGTGTTTTGGTTTTGCTCGATTTGCATATGCGGATTTGGCATTAAAGTTGGTTTTGTGGACGCCCTCTTATGTAAGTTAAACATATCAAGTCTCCGTCTAATTTGACAACCACCTTTATTAAAAGCACTGTACTTTTGATTTACTGAGTTTTGCTAGCTTCCTCCCATTTAATGGTCCAAACCTAATTCAAGTTTACATCTCGTCTGCGAATCATCGAGGAAAAACGCTTCTATCGACATATAACCACGATGAGAATTTACAAGAATCACAAAAGATAGAAGGTTGGAGAGAATTTCATCCAACCATTTCCAAACTAGAGTGATTTGAAGTAGTACCAATAATAAGATCAATATGTGTTGATGAAAATGGGTGGAATTGTACCCAACACATCTTCATGGGCATCAATTATCAAATAAAGATCAAGAAAATTTTCCAGGTTGAGACAAGTAATAGCAAAAACATATTTTGAAAAGTGTTGGTAATCATCCAAATAGGACCCTTTGTTGAATCAATCTCAATGTATTAACCATAGGTAAAAGATATGACTGATGGGTGAAATAAAAAAATTTCATTCCAATAATGGTATGTTCCAAGAACCTGAAAAGAAAATGCAATCTAGGATGTGAAAACATGGATGAAATCAAAATCTACTCCTCAGAAACCTGATATTTACAAAGAAATTAGCCACAGCAAACAACTTCATAACCAATACGGATAAAACTAACTGGGTTTCATATGTTTCACGATCTCAAACCTGGAAAGAATACCGCAAACCAACTTCAATCGCAGAGTTCCCAACAATACACCAAGAAATAAACCAGGGTGAAATTGCAGAATTGTGTGTAGTCAAAGTTCCAATGTTTTCAACTTCATTTTTAAATCAATATGAGAAAGATAATCTTCCATCAATCACACATGCACAGCTTAAGTAGAATCCAGATTGCAAGTATGAGGATAAATGATTGAAGTGGTTATTAGAACCCTGCTATTTCACCCTCGGTTTCATGTCTTAGTCTTATATGGTGCACTGGCGTTGTAGCAGCAGCAAACACCATATGGACCATGAAGAAAATGCAAACGAACCAAACAAAGAGGAAAGAAGTCCAAAACGCAACAGGAGGCAATTTAAGAGCAATGCCTGCAAGCTGATGATTTGCTACTTATTCATTGTTCACCTCACAAAGCTGATTTATCAAGTAAGCTCAAACTACATTGTATCTTTTGAGAGAAAAGCTTTGTTTCTGGTTAAACAATTAAATAAATAAACTACACCTTTTCACGTACAAATATATGACAATAATAATACTATTTTCAAAGCTCCTTGAATCTACTGCTCAAGGCCATCGAGATTCAACTAATAGAACTAGAAACTAACACCATCATAAAATTTCATATAAGCATTTCTAAGAAAATTTGAATGGAACAATAAGATTACACACGACTAAATGCAACAATAGC

mRNA sequence

TTCTCAAAACATCATATGCCTCTGCAATCAGCTGCATATCACCATATTCTATGCCATTGTGGATCATCTTGACGAAGTTACCCGATCCGCCTTTGCCGATGTACGTTACACAGGGACCGCTATCGGGAACTTGGGCTGCAACCTTAATAAGAATGTCTTCAATGTGCTTGAAGGCCTCAAAAGATCCACCAGGCATCAAGGAAGGACCATTCCTAGCACCTTCTTCACCCCCTGAAACTCCCATTCCGAGGCGGGGAGGAGGGGCGTCAACAGTTGATTCATTTCCGTGTGGAGATGGTGGCGAGCAAGCATCATCAAAATCCCATTTAATCAATTTCCCACTTCTAATCTGCGCATTTTCAGCAGCAGCAAACACCATATGGACCATGAAGAAAATGCAAACGAACCAAACAAAGAGGAAAGAAGTCCAAAACGCAACAGGAGGCAATTTAAGAGCAATGCCTGCAAGCTGATGATTTGCTACTTATTCATTGTTCACCTCACAAAGCTGATTTATCAAGTAAGCTCAAACTACATTGTATCTTTTGAGAGAAAAGCTTTGTTTCTGGTTAAACAATTAAATAAATAAACTACACCTTTTCACGTACAAATATATGACAATAATAATACTATTTTCAAAGCTCCTTGAATCTACTGCTCAAGGCCATCGAGATTCAACTAATAGAACTAGAAACTAACACCATCATAAAATTTCATATAAGCATTTCTAAGAAAATTTGAATGGAACAATAAGATTACACACGACTAAATGCAACAATAGC

Coding sequence (CDS)

ATGCCATTGTGGATCATCTTGACGAAGTTACCCGATCCGCCTTTGCCGATGTACGTTACACAGGGACCGCTATCGGGAACTTGGGCTGCAACCTTAATAAGAATGTCTTCAATGTGCTTGAAGGCCTCAAAAGATCCACCAGGCATCAAGGAAGGACCATTCCTAGCACCTTCTTCACCCCCTGAAACTCCCATTCCGAGGCGGGGAGGAGGGGCGTCAACAGTTGATTCATTTCCGTGTGGAGATGGTGGCGAGCAAGCATCATCAAAATCCCATTTAATCAATTTCCCACTTCTAATCTGCGCATTTTCAGCAGCAGCAAACACCATATGGACCATGAAGAAAATGCAAACGAACCAAACAAAGAGGAAAGAAGTCCAAAACGCAACAGGAGGCAATTTAAGAGCAATGCCTGCAAGCTGA

Protein sequence

MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSPPETPIPRRGGGASTVDSFPCGDGGEQASSKSHLINFPLLICAFSAAANTIWTMKKMQTNQTKRKEVQNATGGNLRAMPAS
Homology
[Close]
BLAST of Cp4.1LG01g22190 vs. NCBI nr
Match: OQC18527.1 (hypothetical protein BWX70_03491 [Verrucomicrobia bacterium ADurb.Bin070])

HSP 1 Score: 64.3 bits (155), Expect = 2.24e-10
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPL  ILTK P P LP+   QG  S T+AAT  +++  C  A   PPG+  GP  APSSP
Sbjct: 9  MPLCTILTKWPAPSLPIQAQQGVPSSTFAATSWKIAFTCGHALASPPGMMAGPSSAPSSP 68

Query: 61 PETPIPRR 68
          PETP P +
Sbjct: 69 PETPEPMK 76

[Close]
BLAST of Cp4.1LG01g22190 vs. NCBI nr
Match: PQM45528.1 (hypothetical protein C1Y40_04312 [Mycobacterium talmoniae])

HSP 1 Score: 57.0 bits (136), Expect = 7.11e-07
Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPL  ILTK PDP  PM+V  G  S TWA          L  +  PPG+ +GP  APSSP
Sbjct: 9  MPLCTILTKCPDPSGPMWVQHGSPS-TWAEISSSSGPSDLYDAAGPPGMIDGPLSAPSSP 68

Query: 61 PETPIPRR 68
          PE P P +
Sbjct: 69 PEIPAPTK 75

[Close]
BLAST of Cp4.1LG01g22190 vs. NCBI nr
Match: AMC55237.1 (6-phosphogluconate dehydrogenase [Mycobacterium tuberculosis variant bovis] >CKQ22038.1 Uncharacterised protein [Mycobacterium tuberculosis] >CUI11750.1 hypothetical protein MBBSGS4_1831 [Mycobacterium tuberculosis variant bovis BCG] >CKQ34817.1 Uncharacterised protein [Mycobacterium tuberculosis] >CKQ48165.1 Uncharacterised protein [Mycobacterium tuberculosis])

HSP 1 Score: 56.2 bits (134), Expect = 1.22e-06
Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPLW ILTK P+P  PM+V  G  S T A             S  PPG+ +GPF APSSP
Sbjct: 1  MPLWTILTKCPEPSGPMWVQHGTPS-TCAEISSSSGPSDWYDSAGPPGMIDGPFNAPSSP 60

Query: 61 PETPIPRR 68
          PE P P +
Sbjct: 61 PEIPAPTK 67

[Close]
BLAST of Cp4.1LG01g22190 vs. NCBI nr
Match: AMC50738.1 (6-phosphogluconate dehydrogenase [Mycobacterium tuberculosis variant bovis BCG] >CKT09470.1 Uncharacterised protein [Mycobacterium tuberculosis] >COW78660.1 Uncharacterised protein [Mycobacterium tuberculosis] >COW97620.1 Uncharacterised protein [Mycobacterium tuberculosis] >SGO55961.1 Uncharacterised protein [Mycobacterium tuberculosis])

HSP 1 Score: 56.2 bits (134), Expect = 1.38e-06
Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPLW ILTK P+P  PM+V  G  S T A             S  PPG+ +GPF APSSP
Sbjct: 9  MPLWTILTKCPEPSGPMWVQHGTPS-TCAEISSSSGPSDWYDSAGPPGMIDGPFNAPSSP 68

Query: 61 PETPIPRR 68
          PE P P +
Sbjct: 69 PEIPAPTK 75

[Close]
BLAST of Cp4.1LG01g22190 vs. NCBI nr
Match: COX34496.1 (Uncharacterised protein [Mycobacterium tuberculosis])

HSP 1 Score: 56.2 bits (134), Expect = 1.43e-06
Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPLW ILTK P+P  PM+V  G  S T A             S  PPG+ +GPF APSSP
Sbjct: 9  MPLWTILTKCPEPSGPMWVQHGTPS-TCAEISSSSGPSDWYDSAGPPGMIDGPFNAPSSP 68

Query: 61 PETPIPRR 68
          PE P P +
Sbjct: 69 PEIPAPTK 75

[Close]
BLAST of Cp4.1LG01g22190 vs. ExPASy TrEMBL
Match: A0A1V6FY56 (Uncharacterized protein OS=Verrucomicrobia bacterium ADurb.Bin070 OX=1852927 GN=BWX70_03491 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.08e-10
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPL  ILTK P P LP+   QG  S T+AAT  +++  C  A   PPG+  GP  APSSP
Sbjct: 9  MPLCTILTKWPAPSLPIQAQQGVPSSTFAATSWKIAFTCGHALASPPGMMAGPSSAPSSP 68

Query: 61 PETPIPRR 68
          PETP P +
Sbjct: 69 PETPEPMK 76

[Close]
BLAST of Cp4.1LG01g22190 vs. ExPASy TrEMBL
Match: A0A2S8BFX0 (Uncharacterized protein OS=Mycobacterium talmoniae OX=1858794 GN=C1Y40_04312 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.44e-07
Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPL  ILTK PDP  PM+V  G  S TWA          L  +  PPG+ +GP  APSSP
Sbjct: 9  MPLCTILTKCPDPSGPMWVQHGSPS-TWAEISSSSGPSDLYDAAGPPGMIDGPLSAPSSP 68

Query: 61 PETPIPRR 68
          PE P P +
Sbjct: 69 PEIPAPTK 75

[Close]
BLAST of Cp4.1LG01g22190 vs. ExPASy TrEMBL
Match: A0A655JI85 (Uncharacterized protein OS=Mycobacterium tuberculosis OX=1773 GN=ERS007741_03543 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.70e-07
Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPLW ILTK P+P  PM+V  G  S T A             S  PPG+ +GPF APSSP
Sbjct: 9  MPLWTILTKCPEPSGPMWVQHGTPS-TCAEISSSSGPSDWYDSAGPPGMIDGPFNAPSSP 68

Query: 61 PETPIPRR 68
          PE P P +
Sbjct: 69 PEIPAPTK 75

[Close]
BLAST of Cp4.1LG01g22190 vs. ExPASy TrEMBL
Match: A0A0Y1D2A3 (6-phosphogluconate dehydrogenase OS=Mycobacterium tuberculosis variant bovis BCG OX=33892 GN=RN06_2285 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.70e-07
Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 0 

Query: 1  MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
          MPLW ILTK P+P  PM+V  G  S T A             S  PPG+ +GPF APSSP
Sbjct: 9  MPLWTILTKCPEPSGPMWVQHGTPS-TCAEISSSSGPSDWYDSAGPPGMIDGPFNAPSSP 68

Query: 61 PETPIPRR 68
          PE P P +
Sbjct: 69 PEIPAPTK 75

[Close]
BLAST of Cp4.1LG01g22190 vs. ExPASy TrEMBL
Match: A0A022ML34 (Uncharacterized protein OS=Streptomyces sp. Tu 6176 OX=1470557 GN=CF54_12000 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.48e-05
Identity = 30/68 (44.12%), Postives = 35/68 (51.47%), Query Frame = 0 

Query: 1   MPLWIILTKLPDPPLPMYVTQGPLSGTWAATLIRMSSMCLKASKDPPGIKEGPFLAPSSP 60
           MPL  I TK P P  P  VT G  S   A     +    L  S +PPG+  GP  APSSP
Sbjct: 93  MPLCTIFTKWPAPSGPTCVTHGAPSAALAEIFSSIGPSDLYDSAEPPGMMLGPCSAPSSP 152

Query: 61  PETPIPRR 68
           PE P+P +
Sbjct: 153 PEIPVPTK 160

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g22190 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g22190 vs. NCBI nr
Match NameE-valueIdentityDescription
OQC18527.12.24e-1051.47hypothetical protein BWX70_03491 [Verrucomicrobia bacterium ADurb.Bin070][more]
PQM45528.17.11e-0748.53hypothetical protein C1Y40_04312 [Mycobacterium talmoniae][more]
AMC55237.11.22e-0648.536-phosphogluconate dehydrogenase [Mycobacterium tuberculosis variant bovis] >CKQ... [more]
AMC50738.11.38e-0648.536-phosphogluconate dehydrogenase [Mycobacterium tuberculosis variant bovis BCG] ... [more]
COX34496.11.43e-0648.53Uncharacterised protein [Mycobacterium tuberculosis][more]
BLAST of Cp4.1LG01g22190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1V6FY561.08e-1051.47Uncharacterized protein OS=Verrucomicrobia bacterium ADurb.Bin070 OX=1852927 GN=... [more]
A0A2S8BFX03.44e-0748.53Uncharacterized protein OS=Mycobacterium talmoniae OX=1858794 GN=C1Y40_04312 PE=... [more]
A0A655JI856.70e-0748.53Uncharacterized protein OS=Mycobacterium tuberculosis OX=1773 GN=ERS007741_03543... [more]
A0A0Y1D2A36.70e-0748.536-phosphogluconate dehydrogenase OS=Mycobacterium tuberculosis variant bovis BCG... [more]
A0A022ML347.48e-0544.12Uncharacterized protein OS=Streptomyces sp. Tu 6176 OX=1470557 GN=CF54_12000 PE=... [more]
BLAST of Cp4.1LG01g22190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g22190.1Cp4.1LG01g22190.1mRNA