Homology
BLAST of Cp4.1LG01g22150 vs. ExPASy Swiss-Prot
Match:
Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)
HSP 1 Score: 642.1 bits (1655), Expect = 6.7e-183
Identity = 342/652 (52.45%), Postives = 449/652 (68.87%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLH-KYPVHDTSIVNFR 60
MRY WR L R++ S+ S FQV+SN S R FSS LH ++ V + F
Sbjct: 1 MRYQWRSLLFRSYRSSPRPFLSHHSRFQVISN----STRSFSSFLHERFGVQQRQCL-FA 60
Query: 61 YRTP------RMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLE 120
R+P R S ES I +K A V+ D+FS+ DEI K L+S+ +VISH+L L
Sbjct: 61 LRSPLASSVSRRFSSESAIEEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISHELALR 120
Query: 121 VLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGY 180
VL +LES+PD A RFF W Y +KLSSKSYN ML I GVNG V+EFW L DMKKKG+
Sbjct: 121 VLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGH 180
Query: 181 GISKSVQDKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVE 240
G+S +V+D+V +KF+KDGLE++ E+L+++FASGS+D S +K+ + VCK+V K VWG DVE
Sbjct: 181 GVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVWGADVE 240
Query: 241 QQLRDMNISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGRED 300
+QLRD+ + F SD+VKM+LE L +P KA +FFRWI E+G FKHDE+TYNAMARVLG+E
Sbjct: 241 KQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEK 300
Query: 301 SIDRFWKVVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAG--GNKPSVDC 360
+DRF +++E+RS GYE+E+ET+ V RFC+ +MI+EAV L+ FAMAG N P+ C
Sbjct: 301 FLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHC 360
Query: 361 LTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNA 420
+ LLKKI +K LD+ LF+R LK +T GN + D M+ VLKSL +V R G+ NEVL A
Sbjct: 361 CSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKA 420
Query: 421 MKEYGYVFSGGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGD 480
M E GYV SG L+ +A LS GK DEAN+ VN +EASG + D+K A+L+EG+C A D
Sbjct: 421 MNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKD 480
Query: 481 LAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTY 540
L +AS+C KM+ K AGY + +V AYC + D +LF +LV + QLKPWHSTY
Sbjct: 481 LEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTY 540
Query: 541 KALINKLLVR-----GEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAM 600
K ++ LL++ G F EAL LL MMRNH FPPF+DPF+ Y+S SGT+ +A FLKA+
Sbjct: 541 KIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAV 600
Query: 601 TSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMK 639
TSK FPS ++ L +FEA ++ RH +AQD LS P YIR +A+VLELFN+MK
Sbjct: 601 TSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMK 647
BLAST of Cp4.1LG01g22150 vs. ExPASy Swiss-Prot
Match:
Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)
HSP 1 Score: 621.7 bits (1602), Expect = 9.4e-177
Identity = 337/669 (50.37%), Postives = 448/669 (66.97%), Query Frame = 0
Query: 1 MRY-SWRLLRLRAHFR--------CQLLLSSNSSHFQVLSNPNLQSLRYFSSLLH-KYPV 60
MRY WRL+ LR++ R C + S +S F +P + +L+ L + P+
Sbjct: 1 MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCPLRSPM 60
Query: 61 HDTSIVNFRYRTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDL 120
TS N R S E + +K SA A + DIFS+ DEIRK LESSG+VIS DL
Sbjct: 61 --TSSGNLVKSVGRSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELESSGVVISQDL 120
Query: 121 VLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKK 180
L+VL KLESNPD A FF W+ E+LSSK+YN+ML ILG NG V+EFW L MKK
Sbjct: 121 ALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKK 180
Query: 181 KGYGISKSVQDKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGD 240
KG+G+S +V+DKV +KF+KDGLES+ +LR +F S +D S E + VCK+V K WGD
Sbjct: 181 KGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGD 240
Query: 241 DVEQQLRDMNISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLG 300
DVE+++RD+N+ F SD+VKMI+E L EP KA +FFRWI E+ +FKHDE+TYNAMARVLG
Sbjct: 241 DVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLG 300
Query: 301 REDSIDRFWKVVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAG---GNKP 360
+E +DRF +V EMRS GYE+E+ET+ V RFC+ ++I+EAV+L+ AMAG N P
Sbjct: 301 KEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNP 360
Query: 361 SVDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNE 420
+ C LLKKI +K LD+ LFSRA+K++T+ GNALTDS++ +VLKSL +V R+ + NE
Sbjct: 361 TPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNE 420
Query: 421 VLNAMKEYGYVFSGGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYC 480
+L MK GYV SG ++ +A LS GK DEA++FV+ +E+SG N D+K A+L+EGYC
Sbjct: 421 LLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYC 480
Query: 481 VAGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPW 540
+G+L +A C KMV A Y+ + +V AYC K + DA +L V + QLKP
Sbjct: 481 DSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPR 540
Query: 541 HSTYKALINKLLVR-----GEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGF 600
HSTYK+L+ LL + G F EAL LL +M++H FPPFIDPF+ Y S +G + +A+GF
Sbjct: 541 HSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGF 600
Query: 601 LKAMTSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEA 652
LKAMTS +FP +V L +FE ++ RH +AQD LS CP YIRN+ DVLELFN+MK E+
Sbjct: 601 LKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNES 660
BLAST of Cp4.1LG01g22150 vs. ExPASy Swiss-Prot
Match:
Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)
HSP 1 Score: 336.3 bits (861), Expect = 7.9e-91
Identity = 182/546 (33.33%), Postives = 300/546 (54.95%), Query Frame = 0
Query: 94 EIRKGLESSGIVISHDLVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILG 153
E+ +GL + ++H+ + VL KLE P++A F WV D G S+ Y++ML IL
Sbjct: 75 EVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILV 134
Query: 154 VNGRVEEFWDLNCDMKKKGYGISKSVQDKVLEKFEKDGLESEAEKLRDVFASGSIDKSPE 213
++ FW +MK+ G+ + + + + K+ +++A + + + +
Sbjct: 135 QQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMS 194
Query: 214 KIGSIVCKLVRKNVWGDDVEQQLRDMNISFSSDMVKMILENLCTEPAKAFIFFRWIGENG 273
+ V +V K W +VE++L++M + S + V +L+ L P KA FF W+G G
Sbjct: 195 VVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGG 254
Query: 274 M---FKHDEQTYNAMARVLGREDSIDRFWKVVDEMRSHGYEIEVETFSEVLRRFCKRRMI 333
++H TYNA RVL R +S+ FW VVDEM++ GY+++++T+ +V R+F K RM+
Sbjct: 255 SSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMM 314
Query: 334 EEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVF 393
E V LY + M G KPS+ + LL+ ++ S + DL L R + + TG +L+ ++
Sbjct: 315 AETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYD 374
Query: 394 AVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLKRKVAYQLSSTGKSDEANDFVNSLEAS 453
+ +SL++VGR E E+ AM+ GY ++ + L + +EA ++ +EA
Sbjct: 375 GIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQ 434
Query: 454 GCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETD 513
GC D KTW LI+G+C +L KA C M+EKG D + LD++++ + +
Sbjct: 435 GCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSN-LLDVLIDGFVIHNKFEG 494
Query: 514 ASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYV 573
AS ++V +KPW STYK LI+KLL + EAL LL MM+ +P + + F Y+
Sbjct: 495 ASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYL 554
Query: 574 SKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADV 633
+K GT +DA FL ++SK PS + H+ EAF++ GR DA++ L CP + + H +
Sbjct: 555 AKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKI 614
Query: 634 LELFNS 637
ELF +
Sbjct: 615 SELFGA 619
BLAST of Cp4.1LG01g22150 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 4.7e-19
Identity = 123/529 (23.25%), Postives = 212/529 (40.08%), Query Frame = 0
Query: 71 EIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLESNPDEAIRFFG 130
EIG DSA+ ++ K D+D +R L L +L N ++ F
Sbjct: 47 EIGGTDSANE--WEKLLKPFDLDSLRNSFHK-----ITPFQLYKLLELPLNVSTSMELFS 106
Query: 131 WVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQDKVLEKFEKD 190
W G + S Y +++G LG NG + L MK +G +S+ ++ ++K
Sbjct: 107 WTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKA 166
Query: 191 GLESEAEKL----RDVFASGSIDKSPEKIGSIV----CKLVRKNVWGDDVEQQLRDMNIS 250
G + +L R+V++ KS + I+ C V NV+ D + +++ +
Sbjct: 167 GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 226
Query: 251 FSSDMVKMILENLC--TEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 310
F ++++ C E A R + ++G + Y + L + + ++ +
Sbjct: 227 FG-----VVMKAFCAVNEIDSALSLLRDMTKHGCVP-NSVIYQTLIHSLSKCNRVNEALQ 286
Query: 311 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 370
+++EM G + ETF++V+ CK I EA + + G P +L+ +
Sbjct: 287 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 346
Query: 371 VSKHLDLS--LFSRALKIFTETGNALTDSMVF--------AVLKSLST----VGRIGEYN 430
+D + LF R K N L V AVL + T V + YN
Sbjct: 347 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 406
Query: 431 EVLNAMKEYGYVFSG--GLKRKVAYQLSS-------------------TGKSDEANDFVN 490
++ YGY G GL +V + + + GK DEA + +N
Sbjct: 407 SLI-----YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 466
Query: 491 SLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQK 550
+ A G + + LI +C + +A + +M KG YT + +++ C+
Sbjct: 467 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV-YTFNSLISGLCEV 526
Query: 551 KRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEFREALKLLGMM 555
A L D++ E + TY LIN L RGE +EA KL+ M
Sbjct: 527 DEIKHALWLLRDMISEGVVAN-TVTYNTLINAFLRRGEIKEARKLVNEM 555
BLAST of Cp4.1LG01g22150 vs. ExPASy Swiss-Prot
Match:
Q9LUR2 (Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g16710 PE=3 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 6.4e-16
Identity = 86/384 (22.40%), Postives = 165/384 (42.97%), Query Frame = 0
Query: 255 LCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWKVVDEMRSHGYEIEV 314
L ++P +A F + + G F+ D T+ ++ + I+ + D++ G++ V
Sbjct: 130 LSSQPCRASCFLGKMMKLG-FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNV 189
Query: 315 ETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA-VSKHLDLSLFSRA 374
T++ ++R CK R + AV L+ G++P+V L+ + + + D + R
Sbjct: 190 VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD 249
Query: 375 LKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKE---YGYVFSGGLKRKVAYQ 434
+ N +T + A++ + VG++ E E+ N M + Y VF+ G +
Sbjct: 250 MMKRRIEPNVITFT---ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG---SLING 309
Query: 435 LSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVEKGVDCC 494
L G DEA +E +GC + + LI G+C + + ++M +KGV
Sbjct: 310 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV-VA 369
Query: 495 AGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEFREALKL 554
T +++ YC R A +F + + ++ P TY L++ L G+ +AL +
Sbjct: 370 NTITYTVLIQGYCLVGRPDVAQEVF-NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 429
Query: 555 LGMMRNHEFPPFIDPFILYVS---KSGTADDAIGFLKAMTSKSF-PSTTVFLHLFEAFFQ 614
MR E I + + + K G +DA ++ SK P+ + + F +
Sbjct: 430 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 489
Query: 615 AGRHGDAQDFLSKC--PGYIRNHA 629
G +A K G++ N +
Sbjct: 490 RGLIHEADSLFKKMKEDGFLPNES 504
BLAST of Cp4.1LG01g22150 vs. NCBI nr
Match:
XP_023511958.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1300 bits (3363), Expect = 0.0
Identity = 651/651 (100.00%), Postives = 651/651 (100.00%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60
MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY
Sbjct: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60
Query: 61 RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120
RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES
Sbjct: 61 RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120
Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
Query: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN
Sbjct: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
Query: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300
ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK
Sbjct: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300
Query: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA
Sbjct: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
Query: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV
Sbjct: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
BLAST of Cp4.1LG01g22150 vs. NCBI nr
Match:
KAG6602554.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1273 bits (3294), Expect = 0.0
Identity = 638/651 (98.00%), Postives = 644/651 (98.92%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60
MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKY VH TSIVN RY
Sbjct: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVHGTSIVNSRY 60
Query: 61 RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120
RTPRMLSYE EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLES
Sbjct: 61 RTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
Query: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
+KVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN
Sbjct: 181 NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
Query: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300
+SFSSDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYNAMARVLG EDSIDRFWK
Sbjct: 241 VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIDRFWK 300
Query: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
VVDEMRSHGYE+EVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA
Sbjct: 301 VVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
Query: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPW STYKALINKLLV
Sbjct: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALINKLLV 540
Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAA PPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 651
BLAST of Cp4.1LG01g22150 vs. NCBI nr
Match:
XP_022921370.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1273 bits (3293), Expect = 0.0
Identity = 638/651 (98.00%), Postives = 644/651 (98.92%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60
MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLL KYPVHDTSIVN RY
Sbjct: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLRKYPVHDTSIVNSRY 60
Query: 61 RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120
TPRMLS E EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLES
Sbjct: 61 STPRMLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
Query: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
+KVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN
Sbjct: 181 NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
Query: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300
IS SSDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYNAMARVLGREDSIDRFWK
Sbjct: 241 ISLSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGREDSIDRFWK 300
Query: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
VVDEMRSHGYE+EVETFSEVLRRFCKR+MIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA
Sbjct: 301 VVDEMRSHGYEMEVETFSEVLRRFCKRKMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
Query: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV
Sbjct: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAA PPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 651
BLAST of Cp4.1LG01g22150 vs. NCBI nr
Match:
KAG7033234.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1271 bits (3290), Expect = 0.0
Identity = 637/651 (97.85%), Postives = 644/651 (98.92%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60
MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKY VH TSIVN RY
Sbjct: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYSVHGTSIVNSRY 60
Query: 61 RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120
RTPRMLSYE EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLES
Sbjct: 61 RTPRMLSYEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
Query: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
+KVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN
Sbjct: 181 NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
Query: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300
+SFSSDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYNAMARVLG EDSI+RFWK
Sbjct: 241 VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGSEDSIERFWK 300
Query: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
VVDEMRSHGYE+EVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA
Sbjct: 301 VVDEMRSHGYEMEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
Query: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPW STYKALINKLLV
Sbjct: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWDSTYKALINKLLV 540
Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAA PPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 651
BLAST of Cp4.1LG01g22150 vs. NCBI nr
Match:
XP_022990729.1 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1235 bits (3195), Expect = 0.0
Identity = 619/651 (95.08%), Postives = 632/651 (97.08%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60
MRYSW LL LRAHFRCQLLLSSNSSHFQVLSNPNL SLRYFS LLHKYPVHDTSIVN RY
Sbjct: 1 MRYSWSLLGLRAHFRCQLLLSSNSSHFQVLSNPNLPSLRYFS-LLHKYPVHDTSIVNSRY 60
Query: 61 RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120
TPRMLS E EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLES
Sbjct: 61 CTPRMLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCD+KKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDIKKKGYGISKSVQ 180
Query: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
+KVLEKFEKDGLESEAE+LRDVFASGSIDKSPEK+GS+VCKLVRKNVWG+DVEQQLRDMN
Sbjct: 181 NKVLEKFEKDGLESEAERLRDVFASGSIDKSPEKMGSVVCKLVRKNVWGNDVEQQLRDMN 240
Query: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300
+SFSSDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYN MARVLGREDSIDRFWK
Sbjct: 241 VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNGMARVLGREDSIDRFWK 300
Query: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
VVDEMRSHGYE+EVETFSEVLRRFC RRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKI
Sbjct: 301 VVDEMRSHGYEMEVETFSEVLRRFCARRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIT 360
Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
VSKHLDLS+FSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSMFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
Query: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
KM EKGVDCCAGY LDLVVNAYCQKKRETD SRL CDLVDEKQLKPWHSTYK LINKLLV
Sbjct: 481 KMFEKGVDCCAGYALDLVVNAYCQKKRETDGSRLLCDLVDEKQLKPWHSTYKELINKLLV 540
Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNS + VEAA PPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSTRLVEAASPPPNLAS 650
BLAST of Cp4.1LG01g22150 vs. ExPASy TrEMBL
Match:
A0A6J1E5F8 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429656 PE=4 SV=1)
HSP 1 Score: 1273 bits (3293), Expect = 0.0
Identity = 638/651 (98.00%), Postives = 644/651 (98.92%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60
MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLL KYPVHDTSIVN RY
Sbjct: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLRKYPVHDTSIVNSRY 60
Query: 61 RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120
TPRMLS E EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLES
Sbjct: 61 STPRMLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
Query: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
+KVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN
Sbjct: 181 NKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
Query: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300
IS SSDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYNAMARVLGREDSIDRFWK
Sbjct: 241 ISLSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGREDSIDRFWK 300
Query: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
VVDEMRSHGYE+EVETFSEVLRRFCKR+MIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA
Sbjct: 301 VVDEMRSHGYEMEVETFSEVLRRFCKRKMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
Query: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV
Sbjct: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAA PPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 651
BLAST of Cp4.1LG01g22150 vs. ExPASy TrEMBL
Match:
A0A6J1JSU2 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487528 PE=4 SV=1)
HSP 1 Score: 1235 bits (3195), Expect = 0.0
Identity = 619/651 (95.08%), Postives = 632/651 (97.08%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDTSIVNFRY 60
MRYSW LL LRAHFRCQLLLSSNSSHFQVLSNPNL SLRYFS LLHKYPVHDTSIVN RY
Sbjct: 1 MRYSWSLLGLRAHFRCQLLLSSNSSHFQVLSNPNLPSLRYFS-LLHKYPVHDTSIVNSRY 60
Query: 61 RTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLES 120
TPRMLS E EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLES
Sbjct: 61 CTPRMLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLES 120
Query: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ 180
NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCD+KKKGYGISKSVQ
Sbjct: 121 NPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDIKKKGYGISKSVQ 180
Query: 181 DKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMN 240
+KVLEKFEKDGLESEAE+LRDVFASGSIDKSPEK+GS+VCKLVRKNVWG+DVEQQLRDMN
Sbjct: 181 NKVLEKFEKDGLESEAERLRDVFASGSIDKSPEKMGSVVCKLVRKNVWGNDVEQQLRDMN 240
Query: 241 ISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 300
+SFSSDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYN MARVLGREDSIDRFWK
Sbjct: 241 VSFSSDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNGMARVLGREDSIDRFWK 300
Query: 301 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 360
VVDEMRSHGYE+EVETFSEVLRRFC RRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKI
Sbjct: 301 VVDEMRSHGYEMEVETFSEVLRRFCARRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIT 360
Query: 361 VSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
VSKHLDLS+FSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS
Sbjct: 361 VSKHLDLSMFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFS 420
Query: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH
Sbjct: 421 GGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIH 480
Query: 481 KMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLV 540
KM EKGVDCCAGY LDLVVNAYCQKKRETD SRL CDLVDEKQLKPWHSTYK LINKLLV
Sbjct: 481 KMFEKGVDCCAGYALDLVVNAYCQKKRETDGSRLLCDLVDEKQLKPWHSTYKELINKLLV 540
Query: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL
Sbjct: 541 RGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHL 600
Query: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNS + VEAA PPPNLAS
Sbjct: 601 FEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSTRLVEAASPPPNLAS 650
BLAST of Cp4.1LG01g22150 vs. ExPASy TrEMBL
Match:
A0A6J1E0A6 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429656 PE=4 SV=1)
HSP 1 Score: 1155 bits (2989), Expect = 0.0
Identity = 577/587 (98.30%), Postives = 583/587 (99.32%), Query Frame = 0
Query: 65 MLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLESNPDE 124
MLS E EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLESNPDE
Sbjct: 1 MLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDE 60
Query: 125 AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQDKVL 184
AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQ+KVL
Sbjct: 61 AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQNKVL 120
Query: 185 EKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNISFS 244
EKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNIS S
Sbjct: 121 EKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNISLS 180
Query: 245 SDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWKVVDE 304
SDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYNAMARVLGREDSIDRFWKVVDE
Sbjct: 181 SDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNAMARVLGREDSIDRFWKVVDE 240
Query: 305 MRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKH 364
MRSHGYE+EVETFSEVLRRFCKR+MIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKH
Sbjct: 241 MRSHGYEMEVETFSEVLRRFCKRKMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKH 300
Query: 365 LDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK 424
LDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK
Sbjct: 301 LDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK 360
Query: 425 RKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVE 484
RKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVE
Sbjct: 361 RKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVE 420
Query: 485 KGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEF 544
KGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEF
Sbjct: 421 KGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEF 480
Query: 545 REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF 604
REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF
Sbjct: 481 REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF 540
Query: 605 FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAA PPPNLAS
Sbjct: 541 FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAAPPPNLAS 587
BLAST of Cp4.1LG01g22150 vs. ExPASy TrEMBL
Match:
A0A6J1JQW6 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487528 PE=4 SV=1)
HSP 1 Score: 1129 bits (2920), Expect = 0.0
Identity = 561/587 (95.57%), Postives = 574/587 (97.79%), Query Frame = 0
Query: 65 MLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLESNPDE 124
MLS E EIGQKDSAHAV+FDIFSKCRDVDEIRKGLESSG+VISHDLVLEVLGKLESNPDE
Sbjct: 1 MLSSEPEIGQKDSAHAVVFDIFSKCRDVDEIRKGLESSGVVISHDLVLEVLGKLESNPDE 60
Query: 125 AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQDKVL 184
AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCD+KKKGYGISKSVQ+KVL
Sbjct: 61 AIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDIKKKGYGISKSVQNKVL 120
Query: 185 EKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVEQQLRDMNISFS 244
EKFEKDGLESEAE+LRDVFASGSIDKSPEK+GS+VCKLVRKNVWG+DVEQQLRDMN+SFS
Sbjct: 121 EKFEKDGLESEAERLRDVFASGSIDKSPEKMGSVVCKLVRKNVWGNDVEQQLRDMNVSFS 180
Query: 245 SDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWKVVDE 304
SDMVKMILENLCTEPAKAFIFFRWIGE+GMFKHDEQTYN MARVLGREDSIDRFWKVVDE
Sbjct: 181 SDMVKMILENLCTEPAKAFIFFRWIGESGMFKHDEQTYNGMARVLGREDSIDRFWKVVDE 240
Query: 305 MRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKH 364
MRSHGYE+EVETFSEVLRRFC RRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKI VSKH
Sbjct: 241 MRSHGYEMEVETFSEVLRRFCARRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKITVSKH 300
Query: 365 LDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK 424
LDLS+FSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK
Sbjct: 301 LDLSMFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLK 360
Query: 425 RKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVE 484
RKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKM E
Sbjct: 361 RKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMFE 420
Query: 485 KGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEF 544
KGVDCCAGY LDLVVNAYCQKKRETD SRL CDLVDEKQLKPWHSTYK LINKLLVRGEF
Sbjct: 421 KGVDCCAGYALDLVVNAYCQKKRETDGSRLLCDLVDEKQLKPWHSTYKELINKLLVRGEF 480
Query: 545 REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF 604
REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF
Sbjct: 481 REALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAF 540
Query: 605 FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNLAS 651
FQAGRHGDAQDFLSKCPGYIRNHADVLELFNS + VEAA PPPNLAS
Sbjct: 541 FQAGRHGDAQDFLSKCPGYIRNHADVLELFNSTRLVEAASPPPNLAS 587
BLAST of Cp4.1LG01g22150 vs. ExPASy TrEMBL
Match:
A0A6J1FJW5 (pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111444701 PE=4 SV=1)
HSP 1 Score: 1095 bits (2833), Expect = 0.0
Identity = 563/662 (85.05%), Postives = 589/662 (88.97%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLHKYPVHDT------- 60
MRYSWRLLRLRAHFR QL +SSN+SHFQV S+PNLQSLR+ SSLL K+PVH T
Sbjct: 1 MRYSWRLLRLRAHFRSQLRISSNASHFQVHSDPNLQSLRFLSSLLPKHPVHGTASPPISD 60
Query: 61 ----SIVNFRYRTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHD 120
SIV RY TPR S ES I QK+S HAV+FDIFSK RDVDEIRK LES+GIVISHD
Sbjct: 61 SQCTSIVKSRYGTPRTFSSESVIEQKESDHAVVFDIFSKSRDVDEIRKDLESNGIVISHD 120
Query: 121 LVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMK 180
LVLEVLGKLESNPD AIRFF WVSGDYGEKLSSKSYNLMLGILGVN V EFWDLNCDMK
Sbjct: 121 LVLEVLGKLESNPDSAIRFFNWVSGDYGEKLSSKSYNLMLGILGVNDHVGEFWDLNCDMK 180
Query: 181 KKGYGISKSVQDKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWG 240
KKGYGISK+V+DKVLEKFEKDGLESEAEKLRDVFASGS DKSPEKIGSIVCKLVR NVWG
Sbjct: 181 KKGYGISKTVRDKVLEKFEKDGLESEAEKLRDVFASGSTDKSPEKIGSIVCKLVRNNVWG 240
Query: 241 DDVEQQLRDMNISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVL 300
DDVEQQL DMN+SFSSDMVKMILENLCT+PAKAFIFFRWIGE+GMFKHDEQTYNAMARVL
Sbjct: 241 DDVEQQLCDMNVSFSSDMVKMILENLCTDPAKAFIFFRWIGESGMFKHDEQTYNAMARVL 300
Query: 301 GREDSIDRFWKVVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSV 360
GRED IDRFWKVVDEMRSHGYE+ VETF++VL RFCKRRMIEEAVNLYVFAMAGGNKPSV
Sbjct: 301 GREDCIDRFWKVVDEMRSHGYEMGVETFAKVLGRFCKRRMIEEAVNLYVFAMAGGNKPSV 360
Query: 361 DCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVL 420
DCLTFLLKKIAVSKHLDL LFSR LK+FTETGN LTDSMV AVLKSLSTVGRIGEY EVL
Sbjct: 361 DCLTFLLKKIAVSKHLDLDLFSRTLKVFTETGNVLTDSMVSAVLKSLSTVGRIGEYTEVL 420
Query: 421 NAMKEYGYVFSGGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVA 480
N MKEYGY FSG LKRKVAY+LS TGKSDEANDF+N LEASGCN DNKTWA+LIEG C A
Sbjct: 421 NVMKEYGYEFSGSLKRKVAYRLSRTGKSDEANDFMNGLEASGCNPDNKTWASLIEGLCAA 480
Query: 481 GDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHS 540
GDLA ASDCIHKMVEKG AGY LDL++NAYCQK+RETDAS L DLVD KQLKPWHS
Sbjct: 481 GDLAMASDCIHKMVEKGDVSNAGYALDLIINAYCQKRRETDASHLLSDLVDGKQLKPWHS 540
Query: 541 TYKALINKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAMTSK 600
TYKALINKLL RGEF+EALKLLGMMRNHEFPPFI+PFI YVSKSGTADDAIGFLKAMTSK
Sbjct: 541 TYKALINKLLQRGEFKEALKLLGMMRNHEFPPFIEPFISYVSKSGTADDAIGFLKAMTSK 600
Query: 601 SFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEAAPPPPNL 651
FPST+VFLHLFEAFFQAGRHGDAQDFLSKCP IRNHADVL LF SMK VEAA P NL
Sbjct: 601 RFPSTSVFLHLFEAFFQAGRHGDAQDFLSKCPSDIRNHADVLNLFYSMKPVEAAASP-NL 660
BLAST of Cp4.1LG01g22150 vs. TAIR 10
Match:
AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 642.1 bits (1655), Expect = 4.8e-184
Identity = 342/652 (52.45%), Postives = 449/652 (68.87%), Query Frame = 0
Query: 1 MRYSWRLLRLRAHFRCQLLLSSNSSHFQVLSNPNLQSLRYFSSLLH-KYPVHDTSIVNFR 60
MRY WR L R++ S+ S FQV+SN S R FSS LH ++ V + F
Sbjct: 1 MRYQWRSLLFRSYRSSPRPFLSHHSRFQVISN----STRSFSSFLHERFGVQQRQCL-FA 60
Query: 61 YRTP------RMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLE 120
R+P R S ES I +K A V+ D+FS+ DEI K L+S+ +VISH+L L
Sbjct: 61 LRSPLASSVSRRFSSESAIEEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISHELALR 120
Query: 121 VLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGY 180
VL +LES+PD A RFF W Y +KLSSKSYN ML I GVNG V+EFW L DMKKKG+
Sbjct: 121 VLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGH 180
Query: 181 GISKSVQDKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGDDVE 240
G+S +V+D+V +KF+KDGLE++ E+L+++FASGS+D S +K+ + VCK+V K VWG DVE
Sbjct: 181 GVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVWGADVE 240
Query: 241 QQLRDMNISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGRED 300
+QLRD+ + F SD+VKM+LE L +P KA +FFRWI E+G FKHDE+TYNAMARVLG+E
Sbjct: 241 KQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEK 300
Query: 301 SIDRFWKVVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAG--GNKPSVDC 360
+DRF +++E+RS GYE+E+ET+ V RFC+ +MI+EAV L+ FAMAG N P+ C
Sbjct: 301 FLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHC 360
Query: 361 LTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNA 420
+ LLKKI +K LD+ LF+R LK +T GN + D M+ VLKSL +V R G+ NEVL A
Sbjct: 361 CSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKA 420
Query: 421 MKEYGYVFSGGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGD 480
M E GYV SG L+ +A LS GK DEAN+ VN +EASG + D+K A+L+EG+C A D
Sbjct: 421 MNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKD 480
Query: 481 LAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTY 540
L +AS+C KM+ K AGY + +V AYC + D +LF +LV + QLKPWHSTY
Sbjct: 481 LEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTY 540
Query: 541 KALINKLLVR-----GEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGFLKAM 600
K ++ LL++ G F EAL LL MMRNH FPPF+DPF+ Y+S SGT+ +A FLKA+
Sbjct: 541 KIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAV 600
Query: 601 TSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMK 639
TSK FPS ++ L +FEA ++ RH +AQD LS P YIR +A+VLELFN+MK
Sbjct: 601 TSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMK 647
BLAST of Cp4.1LG01g22150 vs. TAIR 10
Match:
AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 621.7 bits (1602), Expect = 6.7e-178
Identity = 337/669 (50.37%), Postives = 448/669 (66.97%), Query Frame = 0
Query: 1 MRY-SWRLLRLRAHFR--------CQLLLSSNSSHFQVLSNPNLQSLRYFSSLLH-KYPV 60
MRY WRL+ LR++ R C + S +S F +P + +L+ L + P+
Sbjct: 1 MRYQQWRLMLLRSYHRSHLPYLSPCSQVTSISSRSFSSFIHPGIGALQQSEQLCPLRSPM 60
Query: 61 HDTSIVNFRYRTPRMLSYESEIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDL 120
TS N R S E + +K SA A + DIFS+ DEIRK LESSG+VIS DL
Sbjct: 61 --TSSGNLVKSVGRSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELESSGVVISQDL 120
Query: 121 VLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKK 180
L+VL KLESNPD A FF W+ E+LSSK+YN+ML ILG NG V+EFW L MKK
Sbjct: 121 ALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKK 180
Query: 181 KGYGISKSVQDKVLEKFEKDGLESEAEKLRDVFASGSIDKSPEKIGSIVCKLVRKNVWGD 240
KG+G+S +V+DKV +KF+KDGLES+ +LR +F S +D S E + VCK+V K WGD
Sbjct: 181 KGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGD 240
Query: 241 DVEQQLRDMNISFSSDMVKMILENLCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLG 300
DVE+++RD+N+ F SD+VKMI+E L EP KA +FFRWI E+ +FKHDE+TYNAMARVLG
Sbjct: 241 DVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLG 300
Query: 301 REDSIDRFWKVVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAG---GNKP 360
+E +DRF +V EMRS GYE+E+ET+ V RFC+ ++I+EAV+L+ AMAG N P
Sbjct: 301 KEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNP 360
Query: 361 SVDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNE 420
+ C LLKKI +K LD+ LFSRA+K++T+ GNALTDS++ +VLKSL +V R+ + NE
Sbjct: 361 TPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNE 420
Query: 421 VLNAMKEYGYVFSGGLKRKVAYQLSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYC 480
+L MK GYV SG ++ +A LS GK DEA++FV+ +E+SG N D+K A+L+EGYC
Sbjct: 421 LLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYC 480
Query: 481 VAGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPW 540
+G+L +A C KMV A Y+ + +V AYC K + DA +L V + QLKP
Sbjct: 481 DSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPR 540
Query: 541 HSTYKALINKLLVR-----GEFREALKLLGMMRNHEFPPFIDPFILYVSKSGTADDAIGF 600
HSTYK+L+ LL + G F EAL LL +M++H FPPFIDPF+ Y S +G + +A+GF
Sbjct: 541 HSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGF 600
Query: 601 LKAMTSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADVLELFNSMKHVEA 652
LKAMTS +FP +V L +FE ++ RH +AQD LS CP YIRN+ DVLELFN+MK E+
Sbjct: 601 LKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNES 660
BLAST of Cp4.1LG01g22150 vs. TAIR 10
Match:
AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 336.3 bits (861), Expect = 5.6e-92
Identity = 182/546 (33.33%), Postives = 300/546 (54.95%), Query Frame = 0
Query: 94 EIRKGLESSGIVISHDLVLEVLGKLESNPDEAIRFFGWVSGDYGEKLSSKSYNLMLGILG 153
E+ +GL + ++H+ + VL KLE P++A F WV D G S+ Y++ML IL
Sbjct: 75 EVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILV 134
Query: 154 VNGRVEEFWDLNCDMKKKGYGISKSVQDKVLEKFEKDGLESEAEKLRDVFASGSIDKSPE 213
++ FW +MK+ G+ + + + + K+ +++A + + + +
Sbjct: 135 QQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMS 194
Query: 214 KIGSIVCKLVRKNVWGDDVEQQLRDMNISFSSDMVKMILENLCTEPAKAFIFFRWIGENG 273
+ V +V K W +VE++L++M + S + V +L+ L P KA FF W+G G
Sbjct: 195 VVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGG 254
Query: 274 M---FKHDEQTYNAMARVLGREDSIDRFWKVVDEMRSHGYEIEVETFSEVLRRFCKRRMI 333
++H TYNA RVL R +S+ FW VVDEM++ GY+++++T+ +V R+F K RM+
Sbjct: 255 SSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMM 314
Query: 334 EEAVNLYVFAMAGGNKPSVDCLTFLLKKIAVSKHLDLSLFSRALKIFTETGNALTDSMVF 393
E V LY + M G KPS+ + LL+ ++ S + DL L R + + TG +L+ ++
Sbjct: 315 AETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYD 374
Query: 394 AVLKSLSTVGRIGEYNEVLNAMKEYGYVFSGGLKRKVAYQLSSTGKSDEANDFVNSLEAS 453
+ +SL++VGR E E+ AM+ GY ++ + L + +EA ++ +EA
Sbjct: 375 GIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQ 434
Query: 454 GCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQKKRETD 513
GC D KTW LI+G+C +L KA C M+EKG D + LD++++ + +
Sbjct: 435 GCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSN-LLDVLIDGFVIHNKFEG 494
Query: 514 ASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEFREALKLLGMMRNHEFPPFIDPFILYV 573
AS ++V +KPW STYK LI+KLL + EAL LL MM+ +P + + F Y+
Sbjct: 495 ASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYL 554
Query: 574 SKSGTADDAIGFLKAMTSKSFPSTTVFLHLFEAFFQAGRHGDAQDFLSKCPGYIRNHADV 633
+K GT +DA FL ++SK PS + H+ EAF++ GR DA++ L CP + + H +
Sbjct: 555 AKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKI 614
Query: 634 LELFNS 637
ELF +
Sbjct: 615 SELFGA 619
BLAST of Cp4.1LG01g22150 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 97.8 bits (242), Expect = 3.4e-20
Identity = 123/529 (23.25%), Postives = 212/529 (40.08%), Query Frame = 0
Query: 71 EIGQKDSAHAVLFDIFSKCRDVDEIRKGLESSGIVISHDLVLEVLGKLESNPDEAIRFFG 130
EIG DSA+ ++ K D+D +R L L +L N ++ F
Sbjct: 47 EIGGTDSANE--WEKLLKPFDLDSLRNSFHK-----ITPFQLYKLLELPLNVSTSMELFS 106
Query: 131 WVSGDYGEKLSSKSYNLMLGILGVNGRVEEFWDLNCDMKKKGYGISKSVQDKVLEKFEKD 190
W G + S Y +++G LG NG + L MK +G +S+ ++ ++K
Sbjct: 107 WTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKA 166
Query: 191 GLESEAEKL----RDVFASGSIDKSPEKIGSIV----CKLVRKNVWGDDVEQQLRDMNIS 250
G + +L R+V++ KS + I+ C V NV+ D + +++ +
Sbjct: 167 GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 226
Query: 251 FSSDMVKMILENLC--TEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWK 310
F ++++ C E A R + ++G + Y + L + + ++ +
Sbjct: 227 FG-----VVMKAFCAVNEIDSALSLLRDMTKHGCVP-NSVIYQTLIHSLSKCNRVNEALQ 286
Query: 311 VVDEMRSHGYEIEVETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA 370
+++EM G + ETF++V+ CK I EA + + G P +L+ +
Sbjct: 287 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 346
Query: 371 VSKHLDLS--LFSRALKIFTETGNALTDSMVF--------AVLKSLST----VGRIGEYN 430
+D + LF R K N L V AVL + T V + YN
Sbjct: 347 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 406
Query: 431 EVLNAMKEYGYVFSG--GLKRKVAYQLSS-------------------TGKSDEANDFVN 490
++ YGY G GL +V + + + GK DEA + +N
Sbjct: 407 SLI-----YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 466
Query: 491 SLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVEKGVDCCAGYTLDLVVNAYCQK 550
+ A G + + LI +C + +A + +M KG YT + +++ C+
Sbjct: 467 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV-YTFNSLISGLCEV 526
Query: 551 KRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEFREALKLLGMM 555
A L D++ E + TY LIN L RGE +EA KL+ M
Sbjct: 527 DEIKHALWLLRDMISEGVVAN-TVTYNTLINAFLRRGEIKEARKLVNEM 555
BLAST of Cp4.1LG01g22150 vs. TAIR 10
Match:
AT3G16710.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 87.4 bits (215), Expect = 4.5e-17
Identity = 86/384 (22.40%), Postives = 165/384 (42.97%), Query Frame = 0
Query: 255 LCTEPAKAFIFFRWIGENGMFKHDEQTYNAMARVLGREDSIDRFWKVVDEMRSHGYEIEV 314
L ++P +A F + + G F+ D T+ ++ + I+ + D++ G++ V
Sbjct: 130 LSSQPCRASCFLGKMMKLG-FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNV 189
Query: 315 ETFSEVLRRFCKRRMIEEAVNLYVFAMAGGNKPSVDCLTFLLKKIA-VSKHLDLSLFSRA 374
T++ ++R CK R + AV L+ G++P+V L+ + + + D + R
Sbjct: 190 VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD 249
Query: 375 LKIFTETGNALTDSMVFAVLKSLSTVGRIGEYNEVLNAMKE---YGYVFSGGLKRKVAYQ 434
+ N +T + A++ + VG++ E E+ N M + Y VF+ G +
Sbjct: 250 MMKRRIEPNVITFT---ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG---SLING 309
Query: 435 LSSTGKSDEANDFVNSLEASGCNSDNKTWAALIEGYCVAGDLAKASDCIHKMVEKGVDCC 494
L G DEA +E +GC + + LI G+C + + ++M +KGV
Sbjct: 310 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV-VA 369
Query: 495 AGYTLDLVVNAYCQKKRETDASRLFCDLVDEKQLKPWHSTYKALINKLLVRGEFREALKL 554
T +++ YC R A +F + + ++ P TY L++ L G+ +AL +
Sbjct: 370 NTITYTVLIQGYCLVGRPDVAQEVF-NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 429
Query: 555 LGMMRNHEFPPFIDPFILYVS---KSGTADDAIGFLKAMTSKSF-PSTTVFLHLFEAFFQ 614
MR E I + + + K G +DA ++ SK P+ + + F +
Sbjct: 430 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 489
Query: 615 AGRHGDAQDFLSKC--PGYIRNHA 629
G +A K G++ N +
Sbjct: 490 RGLIHEADSLFKKMKEDGFLPNES 504
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9M891 | 6.7e-183 | 52.45 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... | [more] |
Q8LPF1 | 9.4e-177 | 50.37 | Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... | [more] |
Q9STK5 | 7.9e-91 | 33.33 | Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 4.7e-19 | 23.25 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9LUR2 | 6.4e-16 | 22.40 | Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial OS... | [more] |
Match Name | E-value | Identity | Description | |
XP_023511958.1 | 0.0 | 100.00 | pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Cucur... | [more] |
KAG6602554.1 | 0.0 | 98.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022921370.1 | 0.0 | 98.00 | pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor... | [more] |
KAG7033234.1 | 0.0 | 97.85 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022990729.1 | 0.0 | 95.08 | pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E5F8 | 0.0 | 98.00 | pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor... | [more] |
A0A6J1JSU2 | 0.0 | 95.08 | pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor... | [more] |
A0A6J1E0A6 | 0.0 | 98.30 | pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor... | [more] |
A0A6J1JQW6 | 0.0 | 95.57 | pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like isofor... | [more] |
A0A6J1FJW5 | 0.0 | 85.05 | pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT3G02490.1 | 4.8e-184 | 52.45 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G15980.1 | 6.7e-178 | 50.37 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G48250.1 | 5.6e-92 | 33.33 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G64320.1 | 3.4e-20 | 23.25 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G16710.1 | 4.5e-17 | 22.40 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |