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Cp4.1LG01g22000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTGCTCTGACGTTCTTCTTTCTCCTTCAACCAACGCACGTCGGCCTTAATTAGACCGCCATTTCTCTAAATTTTCGTTTTCTTTTTCGTCCTCTTCCTTCTCCTGACGCTGATTCTCCTGAGATTTCAGCATCGGCTTCAATGACGAGTTGTACAAGATGCTGAATCAACGCTATCCCGAGGTAAAAATGTTTTGTCCATGCTTATATGGAGAAGGAAATTATATTTATTCGATTCAACCTAAAATTCGCGAATATGTCAATTCTTTTGCGCTCATTGTTTGTGTTGATTGATTACAAACCATTTGTGTTATTTTTTTTGTGTTTTTGTTCTCTCTGATTCTTTATCCTTTGTAGAATGTCTGCATCTTACATTTTCTTCTGAAGTGAAATGGAATCCTATGTTTTGATGCTGTGCGGCTATGGTTGTCCTTGTATTTGGATTCCGCAGTTTTTTTCTGAAAAATTCGACGAGAGATCGTTTTTGGTAATACTTGAGGGATGAATTTTCGAAGTTGGTTTTAGGATTGTGATTGAATAGTTTGTAGGAACTAATGTATTGAGGTTGAAATCTCTATTCGTGATTTTGAAAGATAATTCTAACGAATGTTTTAATTTGATTTTTATCCCCTAAAGAACAGGACTGTGTTATTAACAGTGTCTGAATCATCCTTTTTCACGAATGTTGTATTGATTATTGTTGTCCTATATCTTTGTTTCCATGAAAGGAAAAAAAAAAAAGTTCACATAGAAGTCATTTCTTATGGTGATAACATATTAAAAAAAATTTAAATTAGACTGAGAATCGAGAAACATTTCCCTTATGGAGGATAGTTTTCTTAAATAAGTTATCAAATATATATGTTTCAAATGTGCGCATTAGAGTCAAATTGAGCTGATGACCTTTCTAAAGGAAGAAAGTTCAAAACAGTTGAACTAAAGAAAAAAAGAATAATAATATTAAGAAACAACAAGGGAGGCATTACATCGTCCTCTTGTCACCTTCCCTTTACATGGCTTAAGGTCATGGTCCATAAAAATATTTGTATGATGTGACTTAACACTCCCCTGTTTAAACCGATGAGAAAAAAGAATTGGCATGTAACTTAGCTACTGGATGTTTCCATGTGTTAGGATTTCATGGTCTTGCACTTGATACCTATGTTAATTTCTTTTTGATTTGTGCTTGGAAAAGACATAGTTTGCTTGAGTTTGAATTTTGAAGGCACGTTATCTCACTTGCGAGGTCAATTTACCAATAACAAATTTCGTCCCATTTTAGTGCAAAAATAGATCGCTTATGAGTAGAAACCTACCTGTACCCTCCTCATCTTATCTTAAGAATTCTTATCCTATGGGGTTGGAATAAAAATAACAATTGCACAAAGCAAAAGGAAAAAGAAGTTCAAAATAGTGTTTCGTGAAACTTGAACACAGTGTAAGAATTTTTCTTCAAGTTTCAAGTGCTACTAATTGCATCCTGCAGGCTCCATTGGAAAATGAATTAATATCTAATCCTGCATGTACTTTTGACTGATACATATCCTGCAACTTAACAGGTATCCTGTTTGGAAACAACCTTAATTTTTCATTTCAATGGGAAACTGCTGGACTAAGGTAAGCCTGGCTGGAAGTTCATCTCTTTTCCTTGGTCGTATGTTTTCAGGGTCTTGTATTGGATTTCTGTTGTATGCTCTCTGCTTTATTTTGTTTGCTAGCCCTGAAGTTTCTGACCGTCCTTTGTATATTTTGTTTTTATTCATCAAGTTCTTGGGTCACCTTGGGTCCATATAAGACATAATCAAGTGGAGGTTTGAAAGAAATAACACTTAGCTTCTGTGGATTCTTACTCGTTCAGAATCATGCAAGTCCACTAAATTTTCAGAGGATCAAAATTTCCCTCTTTAATTATCATATCTGAACTCTCTTTTTCTTAAAGATTTTTTAACAAATCTACTTTAAAGAGATTTATTCTGAAATTCTTATATGAAGTTCCACTTCCTTGTTCGCCGATAGTCAAGGTTGATTTATTCGACTTTCCCTTCATTTACATGATGTCAACGTTAAGTGTTGGAGTGTTACTGTTCAAGTTTTGGCAATCATCCTTGATACCCATAGTCTGAAAATTTCTTGAACGTGGTCCTCTTCTGATCATGAGATGCATGATTAGACCATAGTTTTTAATTTCTTTGTCATATCTTTAACGGTATGAAATTGTAAACCGTGTTGTTTCAACCTGCTCAAATAAATTCTGTCTTCTAAGTGAGTTACATCCACACTTGGCATTCTGTAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGATCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTAAGTTTCTCCCTATATACTATTTCTTCAATGTGAGGATGACGAATGAATTTCTAGTCCACTCATTCATTTTTAAAACCTAGATCCTGTTCAAGTAAGGTGGTCTAGTCCTCTTATTTTTTGTGTTTGGCATTTAACAAATTCAGGATGTTTTTTCTTTATATAAGTGAATCGTGAAGAAAAATATACAGAGTTCTTTTACCTTAAAACTATGGAACAGGTCATTGCGAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGTAAGTAAAAACACGTTTTGGTTGCCCTTCGTTTATTTATATAAATTCGTGTTTTTAGAGGCGTTGAAGATGAGTATGAATCTAGCTCCCTAGTCCTAATTTAAACTAATAAGGGTCTAGCACTTTATTGTTTTCTATTTGCGAATTGATTGGAAATTTCTTGGACTGATCTCAGGAGCTCAGTAAATCATGGGATATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGATAACTTTTTCTTCCTCATCTATTATCATACATAATACATTCATGCATAGAAGTCTAAAAGCACAAAAAGATAAAAGAGGAAATCTTTTCGGCTTTATTATCACATGTCAGTGTGAAATTTATTCATACTCGAGGTTTAAATCAATCTTTATGGTTCCTTGCTTGCAAGAGAACACAATGTACTTTTATCAAATGCAATGCAATTTGA CCTCTGCTCTGACGTTCTTCTTTCTCCTTCAACCAACGCACGTCGGCCTTAATTAGACCGCCATTTCTCTAAATTTTCGTTTTCTTTTTCGTCCTCTTCCTTCTCCTGACGCTGATTCTCCTGAGATTTCAGCATCGGCTTCAATGACGAGTTGTACAAGATGCTGAATCAACGCTATCCCGAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGATCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTCATTGCGAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGAGCTCAGTAAATCATGGGATATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGATAACTTTTTCTTCCTCATCTATTATCATACATAATACATTCATGCATAGAAGTCTAAAAGCACAAAAAGATAAAAGAGGAAATCTTTTCGGCTTTATTATCACATGTCAGTGTGAAATTTATTCATACTCGAGGTTTAAATCAATCTTTATGGTTCCTTGCTTGCAAGAGAACACAATGTACTTTTATCAAATGCAATGCAATTTGA ATGCTGAATCAACGCTATCCCGAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGATCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTCATTGCGAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGAGCTCAGTAAATCATGGGATATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGA MLNQRYPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITAMDESVMKSQS Homology
BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 8.6e-35 Identity = 72/129 (55.81%), Postives = 96/129 (74.42%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34 Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32 Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 7.6e-31 Identity = 62/118 (52.54%), Postives = 86/118 (72.88%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: Q8GXV2 (Thioredoxin-like protein CXXS2 OS=Arabidopsis thaliana OX=3702 GN=CXXS2 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 6.4e-30 Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: XP_023553281.1 (thioredoxin H4-1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270 bits (691), Expect = 4.03e-91 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: XP_022960245.1 (thioredoxin H4-1-like [Cucurbita moschata] >XP_023553289.1 thioredoxin H4-1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 254 bits (649), Expect = 9.89e-85 Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: XP_022989932.1 (thioredoxin H4-1-like [Cucurbita maxima]) HSP 1 Score: 254 bits (649), Expect = 9.89e-85 Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: KAG7033249.1 (hypothetical protein SDJN02_07303, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 254 bits (650), Expect = 5.84e-84 Identity = 127/131 (96.95%), Postives = 130/131 (99.24%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: XP_038890471.1 (thioredoxin H4-1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 246 bits (628), Expect = 3.08e-81 Identity = 132/163 (80.98%), Postives = 135/163 (82.82%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1) HSP 1 Score: 254 bits (649), Expect = 4.79e-85 Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A6J1H8J4 (thioredoxin H4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461044 PE=4 SV=1) HSP 1 Score: 254 bits (649), Expect = 4.79e-85 Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1) HSP 1 Score: 236 bits (602), Expect = 7.01e-78 Identity = 118/130 (90.77%), Postives = 122/130 (93.85%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1) HSP 1 Score: 234 bits (597), Expect = 4.05e-77 Identity = 117/130 (90.00%), Postives = 122/130 (93.85%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A6J1JRL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1) HSP 1 Score: 221 bits (563), Expect = 4.58e-72 Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 ) HSP 1 Score: 147.1 bits (370), Expect = 1.0e-35 Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 ) HSP 1 Score: 147.1 bits (370), Expect = 1.0e-35 Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 ) HSP 1 Score: 131.7 bits (330), Expect = 4.5e-31 Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein ) HSP 1 Score: 131.3 bits (329), Expect = 5.9e-31 Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 0
BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin ) HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21 Identity = 47/132 (35.61%), Postives = 83/132 (62.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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