Cp4.1LG01g22000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g22000
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thioredoxin H4-1-like
Location	Cp4.1LG01: 20428586 .. 20431883 (-)
RNA-Seq Expression	Cp4.1LG01g22000
Synteny	Cp4.1LG01g22000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTGCTCTGACGTTCTTCTTTCTCCTTCAACCAACGCACGTCGGCCTTAATTAGACCGCCATTTCTCTAAATTTTCGTTTTCTTTTTCGTCCTCTTCCTTCTCCTGACGCTGATTCTCCTGAGATTTCAGCATCGGCTTCAATGACGAGTTGTACAAGATGCTGAATCAACGCTATCCCGAGGTAAAAATGTTTTGTCCATGCTTATATGGAGAAGGAAATTATATTTATTCGATTCAACCTAAAATTCGCGAATATGTCAATTCTTTTGCGCTCATTGTTTGTGTTGATTGATTACAAACCATTTGTGTTATTTTTTTTGTGTTTTTGTTCTCTCTGATTCTTTATCCTTTGTAGAATGTCTGCATCTTACATTTTCTTCTGAAGTGAAATGGAATCCTATGTTTTGATGCTGTGCGGCTATGGTTGTCCTTGTATTTGGATTCCGCAGTTTTTTTCTGAAAAATTCGACGAGAGATCGTTTTTGGTAATACTTGAGGGATGAATTTTCGAAGTTGGTTTTAGGATTGTGATTGAATAGTTTGTAGGAACTAATGTATTGAGGTTGAAATCTCTATTCGTGATTTTGAAAGATAATTCTAACGAATGTTTTAATTTGATTTTTATCCCCTAAAGAACAGGACTGTGTTATTAACAGTGTCTGAATCATCCTTTTTCACGAATGTTGTATTGATTATTGTTGTCCTATATCTTTGTTTCCATGAAAGGAAAAAAAAAAAAGTTCACATAGAAGTCATTTCTTATGGTGATAACATATTAAAAAAAATTTAAATTAGACTGAGAATCGAGAAACATTTCCCTTATGGAGGATAGTTTTCTTAAATAAGTTATCAAATATATATGTTTCAAATGTGCGCATTAGAGTCAAATTGAGCTGATGACCTTTCTAAAGGAAGAAAGTTCAAAACAGTTGAACTAAAGAAAAAAAGAATAATAATATTAAGAAACAACAAGGGAGGCATTACATCGTCCTCTTGTCACCTTCCCTTTACATGGCTTAAGGTCATGGTCCATAAAAATATTTGTATGATGTGACTTAACACTCCCCTGTTTAAACCGATGAGAAAAAAGAATTGGCATGTAACTTAGCTACTGGATGTTTCCATGTGTTAGGATTTCATGGTCTTGCACTTGATACCTATGTTAATTTCTTTTTGATTTGTGCTTGGAAAAGACATAGTTTGCTTGAGTTTGAATTTTGAAGGCACGTTATCTCACTTGCGAGGTCAATTTACCAATAACAAATTTCGTCCCATTTTAGTGCAAAAATAGATCGCTTATGAGTAGAAACCTACCTGTACCCTCCTCATCTTATCTTAAGAATTCTTATCCTATGGGGTTGGAATAAAAATAACAATTGCACAAAGCAAAAGGAAAAAGAAGTTCAAAATAGTGTTTCGTGAAACTTGAACACAGTGTAAGAATTTTTCTTCAAGTTTCAAGTGCTACTAATTGCATCCTGCAGGCTCCATTGGAAAATGAATTAATATCTAATCCTGCATGTACTTTTGACTGATACATATCCTGCAACTTAACAGGTATCCTGTTTGGAAACAACCTTAATTTTTCATTTCAATGGGAAACTGCTGGACTAAGGTAAGCCTGGCTGGAAGTTCATCTCTTTTCCTTGGTCGTATGTTTTCAGGGTCTTGTATTGGATTTCTGTTGTATGCTCTCTGCTTTATTTTGTTTGCTAGCCCTGAAGTTTCTGACCGTCCTTTGTATATTTTGTTTTTATTCATCAAGTTCTTGGGTCACCTTGGGTCCATATAAGACATAATCAAGTGGAGGTTTGAAAGAAATAACACTTAGCTTCTGTGGATTCTTACTCGTTCAGAATCATGCAAGTCCACTAAATTTTCAGAGGATCAAAATTTCCCTCTTTAATTATCATATCTGAACTCTCTTTTTCTTAAAGATTTTTTAACAAATCTACTTTAAAGAGATTTATTCTGAAATTCTTATATGAAGTTCCACTTCCTTGTTCGCCGATAGTCAAGGTTGATTTATTCGACTTTCCCTTCATTTACATGATGTCAACGTTAAGTGTTGGAGTGTTACTGTTCAAGTTTTGGCAATCATCCTTGATACCCATAGTCTGAAAATTTCTTGAACGTGGTCCTCTTCTGATCATGAGATGCATGATTAGACCATAGTTTTTAATTTCTTTGTCATATCTTTAACGGTATGAAATTGTAAACCGTGTTGTTTCAACCTGCTCAAATAAATTCTGTCTTCTAAGTGAGTTACATCCACACTTGGCATTCTGTAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGATCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTAAGTTTCTCCCTATATACTATTTCTTCAATGTGAGGATGACGAATGAATTTCTAGTCCACTCATTCATTTTTAAAACCTAGATCCTGTTCAAGTAAGGTGGTCTAGTCCTCTTATTTTTTGTGTTTGGCATTTAACAAATTCAGGATGTTTTTTCTTTATATAAGTGAATCGTGAAGAAAAATATACAGAGTTCTTTTACCTTAAAACTATGGAACAGGTCATTGCGAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGTAAGTAAAAACACGTTTTGGTTGCCCTTCGTTTATTTATATAAATTCGTGTTTTTAGAGGCGTTGAAGATGAGTATGAATCTAGCTCCCTAGTCCTAATTTAAACTAATAAGGGTCTAGCACTTTATTGTTTTCTATTTGCGAATTGATTGGAAATTTCTTGGACTGATCTCAGGAGCTCAGTAAATCATGGGATATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGATAACTTTTTCTTCCTCATCTATTATCATACATAATACATTCATGCATAGAAGTCTAAAAGCACAAAAAGATAAAAGAGGAAATCTTTTCGGCTTTATTATCACATGTCAGTGTGAAATTTATTCATACTCGAGGTTTAAATCAATCTTTATGGTTCCTTGCTTGCAAGAGAACACAATGTACTTTTATCAAATGCAATGCAATTTGA

mRNA sequence

CCTCTGCTCTGACGTTCTTCTTTCTCCTTCAACCAACGCACGTCGGCCTTAATTAGACCGCCATTTCTCTAAATTTTCGTTTTCTTTTTCGTCCTCTTCCTTCTCCTGACGCTGATTCTCCTGAGATTTCAGCATCGGCTTCAATGACGAGTTGTACAAGATGCTGAATCAACGCTATCCCGAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGATCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTCATTGCGAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGAGCTCAGTAAATCATGGGATATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGATAACTTTTTCTTCCTCATCTATTATCATACATAATACATTCATGCATAGAAGTCTAAAAGCACAAAAAGATAAAAGAGGAAATCTTTTCGGCTTTATTATCACATGTCAGTGTGAAATTTATTCATACTCGAGGTTTAAATCAATCTTTATGGTTCCTTGCTTGCAAGAGAACACAATGTACTTTTATCAAATGCAATGCAATTTGA

Coding sequence (CDS)

ATGCTGAATCAACGCTATCCCGAGGTTTTCAGTAGTGATCAAGAAGACTATGCTGAAGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTGGATCGATGGAGAAGTGGGAGGCGAAGCTTTTGGAAGCGACCAGAGATGGCAAGATTGTCATTGCGAATTTCAGTGCATCATGGAGTAGACCTTGTAAGTCCATGACGCCAGCATATTGTGAGCTTGCTGATAAGTATACTTCCATGGTGTTTTTGGCCATTGATGTCGATGAGCTAGCTGAGCTCAGTAAATCATGGGATATCAAAGCCACTCCAACATTCGTGTTCTTTAAAGATGGTCGCCAAGTAGATAAATTAGTAGGAGCTGACAAGTCAGATCTGCAACAGAAGATAACTGCAATGGATGAATCGGTAATGAAATCTCAGAGTTGA

Protein sequence

MLNQRYPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITAMDESVMKSQS

Homology

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BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.6e-35
Identity = 72/129 (55.81%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 11  SSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAY 70
           + D E + E+      NVHLI + E+W+ KL EA+RDGKIV+ANFSA W  PCK + P Y
Sbjct: 12  ADDDEPHIELA---GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYY 71

Query: 71  CELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKIT 130
            EL++ Y S++FL IDVDEL++ S SW+IKATPTF F +DG+QVDKLVGA+K +L +KIT
Sbjct: 72  IELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKIT 131

Query: 131 AMDESVMKS 140
           A+ +S+  S
Sbjct: 132 AILDSLPPS 137

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34
Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 11  SSDQEDYAEVQNVD--SKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTP 70
           S  + D   V NV+    NVHLI + E W+ KL EA RDGKIV+ANFSA+W  PCK + P
Sbjct: 6   SKGKGDDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAP 65

Query: 71  AYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQK 130
            + EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KLVGA+K +LQ+K
Sbjct: 66  FFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKK 125

Query: 131 ITAMDESVMKS 140
           +T++ +SV +S
Sbjct: 126 VTSIIDSVPES 136

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32
Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 12  SDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYC 71
           SD+ED  + +     NVH+I + E W+ K+ EA +DGKIVIANFSA+W  PC+ + P Y 
Sbjct: 10  SDEEDKIDFK---GGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVYA 69

Query: 72  ELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITA 131
           E++  Y   +FL IDVDEL + S SWDI+ATPTF F K+G QVDKLVGA+K +L++K+ A
Sbjct: 70  EMSQTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGANKPELEKKVAA 129

Query: 132 MDES 136
           + +S
Sbjct: 130 LADS 130

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.6e-31
Identity = 62/118 (52.54%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 17  YAEVQNVDSK--NVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELA 76
           + E   +D K  NVH+I S E W+ K+ EA +DGKIV+ANFSASW  PC+ + P Y E++
Sbjct: 11  HIEEDKLDFKGGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCGPCRVIAPIYAEMS 70

Query: 77  DKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITAM 133
             Y  ++FL IDVD+L + S SWDI+ATPTF F K+ +QVDKLVGA+K +L++K+ A+
Sbjct: 71  KTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGANKPELEKKVQAL 128

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot
Match: Q8GXV2 (Thioredoxin-like protein CXXS2 OS=Arabidopsis thaliana OX=3702 GN=CXXS2 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.4e-30
Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 28  VHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDV 87
           VH +  MEKWE K+ EA   GKI++ NF ASW  P K++ P Y ELA  YTSM+F+ IDV
Sbjct: 42  VHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMIFVTIDV 101

Query: 88  DELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITA 132
           +ELAE S  W++ ATPT VF KDGRQ+DKLVG D ++LQ+K  A
Sbjct: 102 EELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQKKTAA 145

[Close]

BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: XP_023553281.1 (thioredoxin H4-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270 bits (691), Expect = 4.03e-91
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MLNQRYPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWS 60
           MLNQRYPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWS
Sbjct: 1   MLNQRYPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWS 60

Query: 61  RPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGA 120
           RPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGA
Sbjct: 61  RPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGA 120

Query: 121 DKSDLQQKITAMDES 135
           DKSDLQQKITAMDES
Sbjct: 121 DKSDLQQKITAMDES 135

[Close]

BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: XP_022960245.1 (thioredoxin H4-1-like [Cucurbita moschata] >XP_023553289.1 thioredoxin H4-1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254 bits (649), Expect = 9.89e-85
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 6   YPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 65
           + +VFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS
Sbjct: 5   WTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 64

Query: 66  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 125
           MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL
Sbjct: 65  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 124

Query: 126 QQKITAMDES 135
           QQKITAMDES
Sbjct: 125 QQKITAMDES 134

[Close]

BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: XP_022989932.1 (thioredoxin H4-1-like [Cucurbita maxima])

HSP 1 Score: 254 bits (649), Expect = 9.89e-85
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 6   YPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 65
           + +VFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS
Sbjct: 5   WTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 64

Query: 66  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 125
           MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL
Sbjct: 65  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 124

Query: 126 QQKITAMDES 135
           QQKITAMDES
Sbjct: 125 QQKITAMDES 134

[Close]

BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: KAG7033249.1 (hypothetical protein SDJN02_07303, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254 bits (650), Expect = 5.84e-84
Identity = 127/131 (96.95%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 6   YPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 65
           + +VFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS
Sbjct: 5   WTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 64

Query: 66  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 125
           MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL
Sbjct: 65  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 124

Query: 126 QQKITAMDESV 136
           QQKITAMDES+
Sbjct: 125 QQKITAMDESL 135

[Close]

BLAST of Cp4.1LG01g22000 vs. NCBI nr
Match: XP_038890471.1 (thioredoxin H4-1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 246 bits (628), Expect = 3.08e-81
Identity = 132/163 (80.98%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MLNQRYPEV--------FSSD--------------QEDYAEVQNVDSKNVHLIGSMEKWE 60
           MLNQRYPEV        F +D              QEDYAEVQNVDSKNVHLI SMEKWE
Sbjct: 1   MLNQRYPEVSCLETTLIFQTDSILHFQWETAGLSVQEDYAEVQNVDSKNVHLITSMEKWE 60

Query: 61  AKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSKSWD 120
           AKLLEAT+DGKIVIANFSA W RPCKSMTPAYCELADKYTSMVFLAIDVDELAELS SWD
Sbjct: 61  AKLLEATKDGKIVIANFSAPWCRPCKSMTPAYCELADKYTSMVFLAIDVDELAELSTSWD 120

Query: 121 IKATPTFVFFKDGRQVDKLVGADKSDLQQKITAMDESVMKSQS 141
           IKATPTFVFFKDGRQVDKLVGADKSDLQQKI AMDESV+KSQS
Sbjct: 121 IKATPTFVFFKDGRQVDKLVGADKSDLQQKIAAMDESVIKSQS 163

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 4.79e-85
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 6   YPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 65
           + +VFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS
Sbjct: 5   WTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 64

Query: 66  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 125
           MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL
Sbjct: 65  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 124

Query: 126 QQKITAMDES 135
           QQKITAMDES
Sbjct: 125 QQKITAMDES 134

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A6J1H8J4 (thioredoxin H4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461044 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 4.79e-85
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 6   YPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 65
           + +VFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS
Sbjct: 5   WTKVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 64

Query: 66  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 125
           MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL
Sbjct: 65  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 124

Query: 126 QQKITAMDES 135
           QQKITAMDES
Sbjct: 125 QQKITAMDES 134

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1)

HSP 1 Score: 236 bits (602), Expect = 7.01e-78
Identity = 118/130 (90.77%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 6   YPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 65
           + ++F+S QEDYAEVQNVDSKNVHLI SMEKWEAKLLEAT DGKIVIANFSA W RPCKS
Sbjct: 5   WTKLFNSGQEDYAEVQNVDSKNVHLITSMEKWEAKLLEATEDGKIVIANFSAHWCRPCKS 64

Query: 66  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 125
           MTPAYCELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKLVGADKSDL
Sbjct: 65  MTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGADKSDL 124

Query: 126 QQKITAMDES 135
           QQKI AMDES
Sbjct: 125 QQKIAAMDES 134

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 4.05e-77
Identity = 117/130 (90.00%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 6   YPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 65
           + ++F+S QEDY EVQNVDSKNVHLI SMEKWEAKLLEAT+DGKIVIANFSA W RPCKS
Sbjct: 5   WTKLFNSAQEDYREVQNVDSKNVHLITSMEKWEAKLLEATQDGKIVIANFSAHWCRPCKS 64

Query: 66  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 125
           MTPAYCELADKYTSMVFLAIDVDELAELS SWDIKATPTFVFFKDGRQVDKLVGADKSDL
Sbjct: 65  MTPAYCELADKYTSMVFLAIDVDELAELSTSWDIKATPTFVFFKDGRQVDKLVGADKSDL 124

Query: 126 QQKITAMDES 135
           QQKI AMDES
Sbjct: 125 QQKIAAMDES 134

[Close]

BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL
Match: A0A6J1JRL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1)

HSP 1 Score: 221 bits (563), Expect = 4.58e-72
Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 6   YPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKS 65
           + ++F+SDQ+D A  + VDSKNVHLI S+EKWEAKL EAT+DGKIV+ANFSA W RPCKS
Sbjct: 5   WTKLFNSDQKDNAVKEQVDSKNVHLITSIEKWEAKLSEATKDGKIVVANFSAPWCRPCKS 64

Query: 66  MTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDL 125
           MTPA+CELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKL+GADKSDL
Sbjct: 65  MTPAFCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLIGADKSDL 124

Query: 126 QQKITAMDES 135
           QQKI AMDE+
Sbjct: 125 QQKIAAMDEA 134

[Close]

BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 147.1 bits (370), Expect = 1.0e-35
Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 11  SSDQEDYAEVQNVD--SKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTP 70
           S  + D   V NV+    NVHLI + E W+ KL EA RDGKIV+ANFSA+W  PCK + P
Sbjct: 6   SKGKGDDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAP 65

Query: 71  AYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQK 130
            + EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KLVGA+K +LQ+K
Sbjct: 66  FFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKK 125

Query: 131 ITAMDESVMKS 140
           +T++ +SV +S
Sbjct: 126 VTSIIDSVPES 136

[Close]

BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 147.1 bits (370), Expect = 1.0e-35
Identity = 71/131 (54.20%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 11  SSDQEDYAEVQNVD--SKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTP 70
           S  + D   V NV+    NVHLI + E W+ KL EA RDGKIV+ANFSA+W  PCK + P
Sbjct: 6   SKGKGDDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAP 65

Query: 71  AYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQK 130
            + EL++K++S++FL +DVDEL++ S SWDIKATPTF F K+G+Q+ KLVGA+K +LQ+K
Sbjct: 66  FFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKK 125

Query: 131 ITAMDESVMKS 140
           +T++ +SV +S
Sbjct: 126 VTSIIDSVPES 136

[Close]

BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 )

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-31
Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 28  VHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSMVFLAIDV 87
           VH +  MEKWE K+ EA   GKI++ NF ASW  P K++ P Y ELA  YTSM+F+ IDV
Sbjct: 42  VHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMIFVTIDV 101

Query: 88  DELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITA 132
           +ELAE S  W++ ATPT VF KDGRQ+DKLVG D ++LQ+K  A
Sbjct: 102 EELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQKKTAA 145

[Close]

BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 5.9e-31
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 0


Query: 21  QNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPCKSMTPAYCELADKYTSM 80
           Q+     VH +  +EKWE K+ EA   GKI++ NFSA W  PCK + P + +LA +Y SM
Sbjct: 35  QHGSKGKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRYPSM 94

Query: 81  VFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKSDLQQKITA 132
           +F+ +DV+ELAE S  W+++ATPT VF KDGRQ+DKLVGA+ S+LQ+K  A
Sbjct: 95  IFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGAETSELQKKTAA 145

[Close]

BLAST of Cp4.1LG01g22000 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21
Identity = 47/132 (35.61%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 4   QRYPEVFSSDQEDYAEVQNVDSKNVHLIGSMEKWEAKLLEATRDGKIVIANFSASWSRPC 63
           +R  +  + ++E  A + + +  ++H   S  + EAK   A +  +++I  F+A+W  PC
Sbjct: 251 ERRKQQEAQEREAQAALNDGEVISIH---STSELEAKTKAAKKASRLLILYFTATWCGPC 310

Query: 64  KSMTPAYCELADKYTSMVFLAIDVDELAELSKSWDIKATPTFVFFKDGRQVDKLVGADKS 123
           + M+P Y  LA +++ +VFL +D+D+  +++ SW+I + PTF F +DG++VDK+VGADK 
Sbjct: 311 RYMSPLYSNLATQHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKG 370

Query: 124 DLQQKITAMDES 136
            L+QKI     S
Sbjct: 371 SLEQKIAQHSSS 379

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g22000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P85801	8.6e-35	55.81	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]
Q9C9Y6	1.5e-34	54.20	Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1	[more]
Q9AS75	1.1e-32	52.42	Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S...	[more]
Q0DKF1	7.6e-31	52.54	Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 S...	[more]
Q8GXV2	6.4e-30	57.69	Thioredoxin-like protein CXXS2 OS=Arabidopsis thaliana OX=3702 GN=CXXS2 PE=2 SV=...	[more]

BLAST of Cp4.1LG01g22000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553281.1	4.03e-91	100.00	thioredoxin H4-1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022960245.1	9.89e-85	97.69	thioredoxin H4-1-like [Cucurbita moschata] >XP_023553289.1 thioredoxin H4-1-like...	[more]
XP_022989932.1	9.89e-85	97.69	thioredoxin H4-1-like [Cucurbita maxima]	[more]
KAG7033249.1	5.84e-84	96.95	hypothetical protein SDJN02_07303, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038890471.1	3.08e-81	80.98	thioredoxin H4-1-like isoform X1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g22000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JH67	4.79e-85	97.69	thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1	[more]
A0A6J1H8J4	4.79e-85	97.69	thioredoxin H4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461044 PE=4 SV=1	[more]
A0A0A0KUM3	7.01e-78	90.77	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140...	[more]
A0A1S3CBI4	4.05e-77	90.00	thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1	[more]
A0A6J1JRL7	4.58e-72	83.08	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111489170 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g22000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08710.1	1.0e-35	54.20	thioredoxin H-type 9	[more]
AT3G08710.2	1.0e-35	54.20	thioredoxin H-type 9	[more]
AT2G40790.1	4.5e-31	57.69	C-terminal cysteine residue is changed to a serine 2	[more]
AT3G56420.1	5.9e-31	52.25	Thioredoxin superfamily protein	[more]
AT3G17880.1	3.3e-21	35.61	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 35..130 e-value: 2.4E-20 score: 72.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 9..134 score: 12.329744
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 8..140 e-value: 6.1E-38 score: 131.5
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 12..135
None	No IPR available	PANTHER	PTHR10438:SF394	THIOREDOXIN-LIKE PROTEIN CXXS2-RELATED	coord: 12..135
None	No IPR available	CDD	cd02947	TRX_family	coord: 41..129 e-value: 3.96471E-29 score: 99.94
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 22..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g22000.1	Cp4.1LG01g22000.1	mRNA