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Cp4.1LG01g21880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATATTCGTCGTGCATTTTGATTGGCCACGTGTGAATCCCTCAAAAACGGATGAGGACGCAGACAATTGCTTGTCCGGATACGCTGGTTCCTATAAAGCCCCCTGCCTCGTGGTAAGGGCCTCTCCAGGTTTCCTCTGGTTCTTCATCTTCAAAATTTCCTTCGTTTCTTGTTCATTACAAGAAAACACTTGTGAAATTTGGAGTCCGAGGCTTAGGCTAAGGCTAACTTCTGCAAGAACTGGCTAACTCTCAGGGAATTCTGGAGGAAAATAGTGATTGTAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAACCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCTCCCGATCTCGAGTGGTGGTTCCATGGTCCTCCCTCCCACCAATTTCTGATGCGCCTTCTCACTGGAGCTTCATCCAACGGCCAATCTTTTCAGTTCGTTCCTCAATCAATCACTTCCTTTGGTCCCACCGTCCTCGTTGAAGGCTGCGATCCTACCCGTTCAATCTCCTGGATCCACGCCTGGACCATCACTGATGGGATAATCACTCAGGTTCGCGAGTATTTCAATACCTCCCTTACTGTTACTCGCCTCGGTAACTCAACCGACTCTCCGTCGTCCTCCGTCGCGTCGGAGATTTCCTCTGCCTCGTCGCTGCACCATTGCCCTTCTGTTTGGGAAAGCAGCCTCTCCAATCAGGTCGGGAAATCGGTGCCTGGGCTCGTCTTGGCCATTTAA ATGATATTCGTCGTGCATTTTGATTGGCCACGTGTGAATCCCTCAAAAACGGATGAGGACGCAGACAATTGCTTGTCCGGATACGCTGGTTCCTATAAAGCCCCCTGCCTCGTGGGAATTCTGGAGGAAAATAGTGATTGTAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAACCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCTCCCGATCTCGAGTGGTGGTTCCATGGTCCTCCCTCCCACCAATTTCTGATGCGCCTTCTCACTGGAGCTTCATCCAACGGCCAATCTTTTCAGTTCGTTCCTCAATCAATCACTTCCTTTGGTCCCACCGTCCTCGTTGAAGGCTGCGATCCTACCCGTTCAATCTCCTGGATCCACGCCTGGACCATCACTGATGGGATAATCACTCAGGTTCGCGAGTATTTCAATACCTCCCTTACTGTTACTCGCCTCGGTAACTCAACCGACTCTCCGTCGTCCTCCGTCGCGTCGGAGATTTCCTCTGCCTCGTCGCTGCACCATTGCCCTTCTGTTTGGGAAAGCAGCCTCTCCAATCAGGTCGGGAAATCGGTGCCTGGGCTCGTCTTGGCCATTTAA ATGATATTCGTCGTGCATTTTGATTGGCCACGTGTGAATCCCTCAAAAACGGATGAGGACGCAGACAATTGCTTGTCCGGATACGCTGGTTCCTATAAAGCCCCCTGCCTCGTGGGAATTCTGGAGGAAAATAGTGATTGTAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAACCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCTCCCGATCTCGAGTGGTGGTTCCATGGTCCTCCCTCCCACCAATTTCTGATGCGCCTTCTCACTGGAGCTTCATCCAACGGCCAATCTTTTCAGTTCGTTCCTCAATCAATCACTTCCTTTGGTCCCACCGTCCTCGTTGAAGGCTGCGATCCTACCCGTTCAATCTCCTGGATCCACGCCTGGACCATCACTGATGGGATAATCACTCAGGTTCGCGAGTATTTCAATACCTCCCTTACTGTTACTCGCCTCGGTAACTCAACCGACTCTCCGTCGTCCTCCGTCGCGTCGGAGATTTCCTCTGCCTCGTCGCTGCACCATTGCCCTTCTGTTTGGGAAAGCAGCCTCTCCAATCAGGTCGGGAAATCGGTGCCTGGGCTCGTCTTGGCCATTTAA MIFVVHFDWPRVNPSKTDEDADNCLSGYAGSYKAPCLVGILEENSDCSNQRVVLALYEALTSRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLGNSTDSPSSSVASEISSASSLHHCPSVWESSLSNQVGKSVPGLVLAI Homology
BLAST of Cp4.1LG01g21880 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 6.2e-34 Identity = 76/116 (65.52%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.5e-29 Identity = 71/116 (61.21%), Postives = 82/116 (70.69%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. NCBI nr
Match: KAG6602601.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 409 bits (1051), Expect = 5.46e-144 Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. NCBI nr
Match: KAG7033280.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405 bits (1040), Expect = 2.60e-142 Identity = 199/204 (97.55%), Postives = 200/204 (98.04%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. NCBI nr
Match: KAA0052041.1 (wound-induced protein 1 [Cucumis melo var. makuwa] >TYK04520.1 wound-induced protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 291 bits (746), Expect = 1.75e-97 Identity = 150/168 (89.29%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. NCBI nr
Match: KAE8646573.1 (hypothetical protein Csa_005623 [Cucumis sativus]) HSP 1 Score: 291 bits (744), Expect = 5.16e-97 Identity = 148/169 (87.57%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. NCBI nr
Match: KAG7016029.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 288 bits (736), Expect = 2.65e-96 Identity = 147/167 (88.02%), Postives = 155/167 (92.81%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. ExPASy TrEMBL
Match: A0A5D3BZG9 (Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001370 PE=4 SV=1) HSP 1 Score: 291 bits (746), Expect = 8.49e-98 Identity = 150/168 (89.29%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. ExPASy TrEMBL
Match: A0A6A1VMJ2 (Wound-induced protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR5G017372 PE=4 SV=1) HSP 1 Score: 238 bits (608), Expect = 2.15e-76 Identity = 124/168 (73.81%), Postives = 143/168 (85.12%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. ExPASy TrEMBL
Match: A0A314Y1I0 (Wound-induced protein 1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10679 PE=4 SV=1) HSP 1 Score: 238 bits (608), Expect = 2.15e-76 Identity = 125/172 (72.67%), Postives = 142/172 (82.56%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. ExPASy TrEMBL
Match: A0A1Q3B3D2 (WI12 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05983 PE=4 SV=1) HSP 1 Score: 234 bits (597), Expect = 1.18e-75 Identity = 118/170 (69.41%), Postives = 141/170 (82.94%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. ExPASy TrEMBL
Match: M5XG65 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa018399mg PE=4 SV=1) HSP 1 Score: 234 bits (597), Expect = 2.01e-75 Identity = 124/172 (72.09%), Postives = 139/172 (80.81%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 ) HSP 1 Score: 129.8 bits (325), Expect = 2.5e-30 Identity = 71/116 (61.21%), Postives = 82/116 (70.69%), Query Frame = 0
BLAST of Cp4.1LG01g21880 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 107.1 bits (266), Expect = 1.7e-23 Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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