Cp4.1LG01g21820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g21820
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein EARLY RESPONSIVE TO DEHYDRATION 15-like
Location	Cp4.1LG01: 20546172 .. 20547335 (-)
RNA-Seq Expression	Cp4.1LG01g21820
Synteny	Cp4.1LG01g21820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTATGTGGGGGCGAAAACCGTGTGGCGGTATATCATGTTTTGTCGGGTAGTCAAGAAATCAACCTGTTTTTGGGCCGGCGGAGAAGACTCACTTTCCAAAACCTTGGGCCGGATTCCTTTATAGTGTCATTTCCGTAATATAACCAAACTCTGAGTGCTAATTCATTCCTTTAGTTTTATATATCTCTTCCCCAGCTCTGGATAAAACTTCATCTGCAACTCCTTGATTCGATTTCGCAAGCAGTAGCTATGGATGTGGTTGCTCGAAGAACCTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCCTTGTTCGTTCCCATGGCGTACAGGACGGTGGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAAAATATTTTCGACGACTTCGCTCGTCAACGTAAGTGTTGAAATCTAGCCACTGATTGAGTCGATTCGTTCCCTCTCTTGACAAATCTAACGAACTCGTTGTTTCTTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGTCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAGATTCATCGCGGAATTTCTAACTGATCGCAGTATGTTTCTTCAACAGAACTCAGGAACCAGTTTAAATTGTTGTTGATCTAGGTTTTCCATTTCGTTCATGTATAGAGTCTAGAACTTGATCGGTTAAGCATCAACTCTGATGATCTGTGTTTAGCTACTGTAAATCTGTACCATGTCTTACTTTTGAATAATGATATAATAAAATAGTTCCAAAATTCTCAACCAAGTAGCTCGATCATCAACTAAATCCAAGCTAACAAAATCGGAATTCAAAGAATTCATGTTCACCTGGAAACGCTGAGCCTTTGTTCTTGATTTTTAGATATTAGAAGAGTAGCATCTGCAAATATCTCTGTTGAGTAGCTCTAGCTCGTCCTTTTGGGATATGGCCATATCT

mRNA sequence

AGCTATGTGGGGGCGAAAACCGTGTGGCGGTATATCATGTTTTGTCGGGTAGTCAAGAAATCAACCTGTTTTTGGGCCGGCGGAGAAGACTCACTTTCCAAAACCTTGGGCCGGATTCCTTTATAGTGTCATTTCCGTAATATAACCAAACTCTGAGTGCTAATTCATTCCTTTAGTTTTATATATCTCTTCCCCAGCTCTGGATAAAACTTCATCTGCAACTCCTTGATTCGATTTCGCAAGCAGTAGCTATGGATGTGGTTGCTCGAAGAACCTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCCTTGTTCGTTCCCATGGCGTACAGGACGGTGGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAAAATATTTTCGACGACTTCGCTCGTCAACAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGTCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAGATTCATCGCGGAATTTCTAACTGATCGCAGTATGTTTCTTCAACAGAACTCAGGAACCAGTTTAAATTGTTGTTGATCTAGGTTTTCCATTTCGTTCATGTATAGAGTCTAGAACTTGATCGGTTAAGCATCAACTCTGATGATCTGTGTTTAGCTACTGTAAATCTGTACCATGTCTTACTTTTGAATAATGATATAATAAAATAGTTCCAAAATTCTCAACCAAGTAGCTCGATCATCAACTAAATCCAAGCTAACAAAATCGGAATTCAAAGAATTCATGTTCACCTGGAAACGCTGAGCCTTTGTTCTTGATTTTTAGATATTAGAAGAGTAGCATCTGCAAATATCTCTGTTGAGTAGCTCTAGCTCGTCCTTTTGGGATATGGCCATATCT

Coding sequence (CDS)

ATGGATGTGGTTGCTCGAAGAACCTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCCTTGTTCGTTCCCATGGCGTACAGGACGGTGGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAAAATATTTTCGACGACTTCGCTCGTCAACAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGTCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAG

Protein sequence

MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYAQKSPKIVNVKVSPRTIHQPR

Homology

[Close]

BLAST of Cp4.1LG01g21820 vs. ExPASy Swiss-Prot
Match: I1JIC4 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-33
Identity = 72/132 (54.55%), Postives = 91/132 (68.94%), Query Frame = 0


Query: 12  SVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP--QNDFSFAEN 71
           S S LNPNAP+FVP+AYRTVEDFSDQWWNL+ SSPWFR+YWL+E FQDP  QND +F  +
Sbjct: 5   SASSLNPNAPMFVPLAYRTVEDFSDQWWNLVHSSPWFRDYWLRECFQDPQFQNDDAFDFD 64

Query: 72  EEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTG-AEVPRYAQKSPKIVN 131
            ++ L D           ++E+E +  K++V +G  KW     G A+ PRY +K+PK V 
Sbjct: 65  FDLDLQD-----------EDEKERKEGKEVVSLGVLKWRSCGGGWAQAPRYVEKAPKFVK 124

Query: 132 VKVSPRTIHQPR 141
            KVSPR IHQPR
Sbjct: 125 PKVSPRAIHQPR 125

[Close]

BLAST of Cp4.1LG01g21820 vs. ExPASy Swiss-Prot
Match: Q39096 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.4e-14
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEE-- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q     +   ENE   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ------IVLP------DLENIFDDFARQ-----------QEEEEFEFSKDLVPMGAFKWH 133
                  +LP      D+E+ FD  A +           Q   EF F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 KA-QTGAEVPRYAQKSPKIVNVKV--SPRTIHQPR 141
           ++ ++  E  +YA+K  K  N +V  +PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Cp4.1LG01g21820 vs. ExPASy Swiss-Prot
Match: Q94AR4 (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10
Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 0


Query: 8   TSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP---QNDF 67
           T    +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL    ++     +DF
Sbjct: 4   TIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDF 63

Query: 68  SFAE---NEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYAQ 127
           S  E    E I   D  ++ D           +   ++      K ++++  +  P+Y Q
Sbjct: 64  SVMEEEFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQ 123

Query: 128 KSPKIVNVKVSPRT---IHQPR 141
           K  K +N   + R    I+QPR
Sbjct: 124 K--KYMNPNFNCRRNHHIYQPR 143

[Close]

BLAST of Cp4.1LG01g21820 vs. NCBI nr
Match: XP_022990060.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 284 bits (726), Expect = 1.55e-96
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QNDFSFAENEEIVLPDLENIFDD ARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA
Sbjct: 61  QNDFSFAENEEIVLPDLENIFDDLARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. NCBI nr
Match: KAG7033281.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285 bits (728), Expect = 2.22e-96
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP
Sbjct: 32  MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 91

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QNDFSFAENEEIVLPDLENIF+DFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA
Sbjct: 92  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 151

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKVSPRTIHQPR
Sbjct: 152 QKAPKIVNVKVSPRTIHQPR 171

[Close]

BLAST of Cp4.1LG01g21820 vs. NCBI nr
Match: KAG6602602.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283 bits (723), Expect = 4.44e-96
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVVARR SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVARRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QNDFSFAENEEIVLPDLENIF+DFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA
Sbjct: 61  QNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. NCBI nr
Match: XP_022992587.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima])

HSP 1 Score: 260 bits (665), Expect = 3.12e-87
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVVA   SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QND SFAEN+EIVLPDLEN  +DFA QQEEEE EFSKDLVPMGAFKWHKA+TGAEVPRYA
Sbjct: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. NCBI nr
Match: XP_022939236.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata])

HSP 1 Score: 258 bits (660), Expect = 1.80e-86
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVVA   SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QND SF EN+EIVLPDLEN  +DFA QQEEEE EFSKDLVPMGAFKWHKA+TGAEVPRYA
Sbjct: 61  QNDLSFLENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. ExPASy TrEMBL
Match: A0A6J1JP33 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487067 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 7.50e-97
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QNDFSFAENEEIVLPDLENIFDD ARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA
Sbjct: 61  QNDFSFAENEEIVLPDLENIFDDLARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. ExPASy TrEMBL
Match: A0A6J1JQA7 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111488890 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 1.51e-87
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVVA   SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QND SFAEN+EIVLPDLEN  +DFA QQEEEE EFSKDLVPMGAFKWHKA+TGAEVPRYA
Sbjct: 61  QNDLSFAENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. ExPASy TrEMBL
Match: A0A6J1FFC6 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita moschata OX=3662 GN=LOC111445213 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 8.74e-87
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVVA   SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW+LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVALTNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWDLIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QND SF EN+EIVLPDLEN  +DFA QQEEEE EFSKDLVPMGAFKWHKA+TGAEVPRYA
Sbjct: 61  QNDLSFLENDEIVLPDLENFLEDFACQQEEEELEFSKDLVPMGAFKWHKARTGAEVPRYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKV+PRTIHQPR
Sbjct: 121 QKAPKIVNVKVTPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. ExPASy TrEMBL
Match: A0A0A0KBP8 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 GN=Csa_6G013350 PE=4 SV=1)

HSP 1 Score: 257 bits (656), Expect = 3.56e-86
Identity = 122/140 (87.14%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVV +R SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QN+ SF ENEE +LPDLE+ FDDF RQQEEEE EFSKDLVPMGAFKW KA++GAEVP+YA
Sbjct: 61  QNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. ExPASy TrEMBL
Match: A0A5D3BZS0 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001350 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 1.45e-85
Identity = 122/140 (87.14%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MDVVARRTSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP 60
           MDVV +R SSSSVSMLNPNAPLFVPMAYRTVEDFSDQWW LIQSSPWFREYWLQERFQDP
Sbjct: 1   MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDP 60

Query: 61  QNDFSFAENEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYA 120
           QN+  F ENEE VLPDLE+ FDDF RQQEEEE EFSKDLVPMGAFKW KA++GAEVP+YA
Sbjct: 61  QNELPFGENEEFVLPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYA 120

Query: 121 QKSPKIVNVKVSPRTIHQPR 140
           QK+PKIVNVKVSPRTIHQPR
Sbjct: 121 QKAPKIVNVKVSPRTIHQPR 140

[Close]

BLAST of Cp4.1LG01g21820 vs. TAIR 10
Match: AT2G41430.1 (dehydration-induced protein (ERD15) )

HSP 1 Score: 78.6 bits (192), Expect = 4.5e-15
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEE-- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q     +   ENE   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ------IVLP------DLENIFDDFARQ-----------QEEEEFEFSKDLVPMGAFKWH 133
                  +LP      D+E+ FD  A +           Q   EF F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 KA-QTGAEVPRYAQKSPKIVNVKV--SPRTIHQPR 141
           ++ ++  E  +YA+K  K  N +V  +PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Cp4.1LG01g21820 vs. TAIR 10
Match: AT2G41430.4 (dehydration-induced protein (ERD15) )

HSP 1 Score: 78.6 bits (192), Expect = 4.5e-15
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEE-- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q     +   ENE   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ------IVLP------DLENIFDDFARQ-----------QEEEEFEFSKDLVPMGAFKWH 133
                  +LP      D+E+ FD  A +           Q   EF F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 KA-QTGAEVPRYAQKSPKIVNVKV--SPRTIHQPR 141
           ++ ++  E  +YA+K  K  N +V  +PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Cp4.1LG01g21820 vs. TAIR 10
Match: AT2G41430.2 (dehydration-induced protein (ERD15) )

HSP 1 Score: 78.6 bits (192), Expect = 4.5e-15
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEE-- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q     +   ENE   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ------IVLP------DLENIFDDFARQ-----------QEEEEFEFSKDLVPMGAFKWH 133
                  +LP      D+E+ FD  A +           Q   EF F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 KA-QTGAEVPRYAQKSPKIVNVKV--SPRTIHQPR 141
           ++ ++  E  +YA+K  K  N +V  +PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Cp4.1LG01g21820 vs. TAIR 10
Match: AT2G41430.5 (dehydration-induced protein (ERD15) )

HSP 1 Score: 78.6 bits (192), Expect = 4.5e-15
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 14  SMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEE-- 73
           S LNP+APLF+P A R VEDFS +WW L+ +S W+ +YW+ ++ Q     +   ENE   
Sbjct: 9   STLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYDNGENENGG 68

Query: 74  ------IVLP------DLENIFDDFARQ-----------QEEEEFEFSKDLVPMGAFKWH 133
                  +LP      D+E+ FD  A +           Q   EF F K+   +     +
Sbjct: 69  GHIDVADLLPESFDFDDMEDFFDTDAAEFDQGFDGRMYYQAPSEFGFGKNGEMVKKSSGN 128

Query: 134 KA-QTGAEVPRYAQKSPKIVNVKV--SPRTIHQPR 141
           ++ ++  E  +YA+K  K  N +V  +PR IHQPR
Sbjct: 129 RSPRSIVEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163

[Close]

BLAST of Cp4.1LG01g21820 vs. TAIR 10
Match: AT4G14270.1 (Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins. )

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 0


Query: 8   TSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDP---QNDF 67
           T    +S LNPNAP+F P+ +R VEDFS +WW+L+ +S WFR++WL    ++     +DF
Sbjct: 4   TIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGGDDF 63

Query: 68  SFAE---NEEIVLPDLENIFDDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYAQ 127
           S  E    E I   D  ++ D           +   ++      K ++++  +  P+Y Q
Sbjct: 64  SVMEEEFEEMIASSDGGSMADTVTEADVASYLKMLLNIAESTKEKIYRSKVSSCSPKYNQ 123

Query: 128 KSPKIVNVKVSPRT---IHQPR 141
           K  K +N   + R    I+QPR
Sbjct: 124 K--KYMNPNFNCRRNHHIYQPR 143

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g21820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I1JIC4	2.8e-33	54.55	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 ...	[more]
Q39096	6.4e-14	34.19	Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q94AR4	1.9e-10	31.69	Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Cp4.1LG01g21820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990060.1	1.55e-96	98.57	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]	[more]
KAG7033281.1	2.22e-96	98.57	Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subs...	[more]
KAG6602602.1	4.44e-96	97.86	Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subs...	[more]
XP_022992587.1	3.12e-87	90.00	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]	[more]
XP_022939236.1	1.80e-86	89.29	protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g21820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JP33	7.50e-97	98.57	protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JQA7	1.51e-87	90.00	protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FFC6	8.74e-87	89.29	protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0KBP8	3.56e-86	87.14	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3...	[more]
A0A5D3BZS0	1.45e-85	87.14	Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis melo var. ma...	[more]

BLAST of Cp4.1LG01g21820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41430.1	4.5e-15	34.19	dehydration-induced protein (ERD15)	[more]
AT2G41430.4	4.5e-15	34.19	dehydration-induced protein (ERD15)	[more]
AT2G41430.2	4.5e-15	34.19	dehydration-induced protein (ERD15)	[more]
AT2G41430.5	4.5e-15	34.19	dehydration-induced protein (ERD15)	[more]
AT4G14270.1	1.4e-11	31.69	Protein containing PAM2 motif which mediates interaction with the PABC domain of...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040414	PAM2-containing protein CID1/CID2	PANTHER	PTHR33790	OS05G0344200 PROTEIN	coord: 1..140
None	No IPR available	PANTHER	PTHR33790:SF1	OS05G0344200 PROTEIN	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g21820.1	Cp4.1LG01g21820.1	mRNA