Cp4.1LG01g21230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGCCGGAATACAGGGATGGAGTGACGGCGGCGACTGTGAAGGCTGACGTGTATAGTTTTGGGATTTTAATGTTCGAGGTTGCTATGGGCCGGAGGCCCAATTTGCCGATGGTATTGGAGGATAGAGAAGTGGGCTTAATAGAATGGGCCAGGATTTTGGTGGCCCAAAATAAGCATATGGAAATGGTTGATGCAAGCATTTCGAAGGAGGATCTAGTGGAGGCAAATGTGAAGGAGTATTTTAGGATTGCTTGTTTGTGTACGAGTGAGAGGTCCAAGGAAAGACCTCTTATGTTGAATGTTGTCGAGTTGTTGGATCGGATTTGTGACGTGAAGTTGCACGACGACAACGAGTATCAAAATAAGCTCGATGTGTAG ATGCCGCCGGAATACAGGGATGGAGTGACGGCGGCGACTGTGAAGGCTGACGTGTATAGTTTTGGGATTTTAATGTTCGAGGTTGCTATGGGCCGGAGGCCCAATTTGCCGATGGTATTGGAGGATAGAGAAGTGGGCTTAATAGAATGGGCCAGGATTTTGGTGGCCCAAAATAAGCATATGGAAATGGTTGATGCAAGCATTTCGAAGGAGGATCTAGTGGAGGCAAATGTGAAGGAGTATTTTAGGATTGCTTGTTTGTGTACGAGTGAGAGGTCCAAGGAAAGACCTCTTATGTTGAATGTTGTCGAGTTGTTGGATCGGATTTGTGACGTGAAGTTGCACGACGACAACGAGTATCAAAATAAGCTCGATGTGTAG ATGCCGCCGGAATACAGGGATGGAGTGACGGCGGCGACTGTGAAGGCTGACGTGTATAGTTTTGGGATTTTAATGTTCGAGGTTGCTATGGGCCGGAGGCCCAATTTGCCGATGGTATTGGAGGATAGAGAAGTGGGCTTAATAGAATGGGCCAGGATTTTGGTGGCCCAAAATAAGCATATGGAAATGGTTGATGCAAGCATTTCGAAGGAGGATCTAGTGGAGGCAAATGTGAAGGAGTATTTTAGGATTGCTTGTTTGTGTACGAGTGAGAGGTCCAAGGAAAGACCTCTTATGTTGAATGTTGTCGAGTTGTTGGATCGGATTTGTGACGTGAAGTTGCACGACGACAACGAGTATCAAAATAAGCTCGATGTGTAG MPPEYRDGVTAATVKADVYSFGILMFEVAMGRRPNLPMVLEDREVGLIEWARILVAQNKHMEMVDASISKEDLVEANVKEYFRIACLCTSERSKERPLMLNVVELLDRICDVKLHDDNEYQNKLDV Homology
BLAST of Cp4.1LG01g21230 vs. ExPASy Swiss-Prot
Match: Q69JN6 (Brassinosteroid LRR receptor kinase BRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL1 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.1e-12 Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy Swiss-Prot
Match: C0LGK9 (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana OX=3702 GN=At2g24230 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11 Identity = 38/110 (34.55%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy Swiss-Prot
Match: Q9LYN8 (Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana OX=3702 GN=EMS1 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy Swiss-Prot
Match: Q9ZPS9 (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRL2 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.6e-10 Identity = 41/120 (34.17%), Postives = 58/120 (48.33%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy Swiss-Prot
Match: Q9LJF3 (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRL3 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09 Identity = 32/118 (27.12%), Postives = 61/118 (51.69%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. NCBI nr
Match: XP_023535426.1 (leucine-rich repeat receptor protein kinase EMS1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255 bits (652), Expect = 4.67e-82 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. NCBI nr
Match: KAG7032875.1 (Phytosulfokine receptor 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 247 bits (631), Expect = 6.96e-79 Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. NCBI nr
Match: XP_022963746.1 (putative serine/threonine-protein kinase [Cucurbita moschata] >XP_022963756.1 putative serine/threonine-protein kinase [Cucurbita moschata]) HSP 1 Score: 244 bits (623), Expect = 1.12e-77 Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. NCBI nr
Match: XP_022990380.1 (putative serine/threonine-protein kinase [Cucurbita maxima]) HSP 1 Score: 242 bits (618), Expect = 6.39e-77 Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. NCBI nr
Match: XP_038884715.1 (putative serine/threonine-protein kinase [Benincasa hispida]) HSP 1 Score: 227 bits (578), Expect = 6.92e-71 Identity = 109/125 (87.20%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy TrEMBL
Match: A0A6J1HGX6 (putative serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111463952 PE=3 SV=1) HSP 1 Score: 244 bits (623), Expect = 5.44e-78 Identity = 122/126 (96.83%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy TrEMBL
Match: A0A6J1JPY3 (putative serine/threonine-protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111487254 PE=3 SV=1) HSP 1 Score: 242 bits (618), Expect = 3.10e-77 Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy TrEMBL
Match: A0A6J1BX78 (probable serine/threonine-protein kinase PBL15 OS=Momordica charantia OX=3673 GN=LOC111006507 PE=4 SV=1) HSP 1 Score: 221 bits (563), Expect = 1.60e-70 Identity = 107/125 (85.60%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy TrEMBL
Match: A0A5A7UIA2 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001260 PE=3 SV=1) HSP 1 Score: 220 bits (561), Expect = 1.44e-68 Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. ExPASy TrEMBL
Match: A0A1S3B487 (putative serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103485602 PE=3 SV=1) HSP 1 Score: 220 bits (561), Expect = 1.44e-68 Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. TAIR 10
Match: AT5G42440.1 (Protein kinase superfamily protein ) HSP 1 Score: 129.0 bits (323), Expect = 2.6e-30 Identity = 64/110 (58.18%), Postives = 82/110 (74.55%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. TAIR 10
Match: AT2G24230.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 70.1 bits (170), Expect = 1.5e-12 Identity = 38/110 (34.55%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. TAIR 10
Match: AT5G07280.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11 Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. TAIR 10
Match: AT2G01950.1 (BRI1-like 2 ) HSP 1 Score: 64.7 bits (156), Expect = 6.1e-11 Identity = 41/120 (34.17%), Postives = 58/120 (48.33%), Query Frame = 0
BLAST of Cp4.1LG01g21230 vs. TAIR 10
Match: AT3G13380.1 (BRI1-like 3 ) HSP 1 Score: 64.3 bits (155), Expect = 8.0e-11 Identity = 32/118 (27.12%), Postives = 61/118 (51.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|