Cp4.1LG01g20940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g20940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dof zinc finger protein DOF1.2-like
Location	Cp4.1LG01: 17804089 .. 17804727 (-)
RNA-Seq Expression	Cp4.1LG01g20940
Synteny	Cp4.1LG01g20940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGATCACCACCAGATCTCCCATCTTCCTCCGCCGTTCGCCGCCCATCTCGAACGGAAATGGAAGCCCCATCTCGAAAAAGCCCCCAATTGCCCCCGTTGCGCCTCCGCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTCGTTACTTCTGTAAATCCTGCCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGACCCGCCGTTCCAAATCCTCAACCTCCTCCACTATCTTACCAAACGTAATTTCAACCCAAATTACCGAACACTCTTCCCGATCCGATATCGATCTTGCTGCCGTTTTCGCTAAATTTTTAAACACCCCATCGAGCACAAAGCCCCACGTATCGACCAGCTCCCCGGAATCGACTGACCCATCAGACAATCTAACAGCCAAGAATCCCGAGATCTTCTTCGAAGAGCTATCCGATTTATTCAATCAACCCGAAGATCGGATTACAAAGGACTATGAAAATTTCCCATTTGAGTTACAACCCGAACTAACCATCGATGAACTATGGCCATCGCAACCGATCGAACAACTTCAAGAATGGGAATCTTTCTCGTGCAATTACAACGCGGAATTTTTGTGA

mRNA sequence

ATGTCCGATCACCACCAGATCTCCCATCTTCCTCCGCCGTTCGCCGCCCATCTCGAACGGAAATGGAAGCCCCATCTCGAAAAAGCCCCCAATTGCCCCCGTTGCGCCTCCGCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTCGTTACTTCTGTAAATCCTGCCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGACCCGCCGTTCCAAATCCTCAACCTCCTCCACTATCTTACCAAACGTAATTTCAACCCAAATTACCGAACACTCTTCCCGATCCGATATCGATCTTGCTGCCGTTTTCGCTAAATTTTTAAACACCCCATCGAGCACAAAGCCCCACGTATCGACCAGCTCCCCGGAATCGACTGACCCATCAGACAATCTAACAGCCAAGAATCCCGAGATCTTCTTCGAAGAGCTATCCGATTTATTCAATCAACCCGAAGATCGGATTACAAAGGACTATGAAAATTTCCCATTTGAGTTACAACCCGAACTAACCATCGATGAACTATGGCCATCGCAACCGATCGAACAACTTCAAGAATGGGAATCTTTCTCGTGCAATTACAACGCGGAATTTTTGTGA

Coding sequence (CDS)

ATGTCCGATCACCACCAGATCTCCCATCTTCCTCCGCCGTTCGCCGCCCATCTCGAACGGAAATGGAAGCCCCATCTCGAAAAAGCCCCCAATTGCCCCCGTTGCGCCTCCGCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTCGTTACTTCTGTAAATCCTGCCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGACCCGCCGTTCCAAATCCTCAACCTCCTCCACTATCTTACCAAACGTAATTTCAACCCAAATTACCGAACACTCTTCCCGATCCGATATCGATCTTGCTGCCGTTTTCGCTAAATTTTTAAACACCCCATCGAGCACAAAGCCCCACGTATCGACCAGCTCCCCGGAATCGACTGACCCATCAGACAATCTAACAGCCAAGAATCCCGAGATCTTCTTCGAAGAGCTATCCGATTTATTCAATCAACCCGAAGATCGGATTACAAAGGACTATGAAAATTTCCCATTTGAGTTACAACCCGAACTAACCATCGATGAACTATGGCCATCGCAACCGATCGAACAACTTCAAGAATGGGAATCTTTCTCGTGCAATTACAACGCGGAATTTTTGTGA

Protein sequence

MSDHHQISHLPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFPFELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL

Homology

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-31
Identity = 64/105 (60.95%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 22  WKP----HLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 81
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 82  GCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKFLN 123
           GCRK+RR KSS+ +    ++ +           IDLA V+A FLN
Sbjct: 73  GCRKSRRPKSSSGNNTKTSLTANSGNPGGGSPSIDLALVYANFLN 117

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy Swiss-Prot
Match: P68349 (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.8e-29
Identity = 89/214 (41.59%), Postives = 120/214 (56.07%), Query Frame = 0


Query: 18  LERKWKPHLEK----APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 77
           +  KWK   E+    AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+
Sbjct: 22  IPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNI 81

Query: 78  PVGGGCRKTRRSKSSTSSTI-----LPNVISTQITEHSSR---SDIDLAAVFAKFLNTPS 137
           PVGGGCRK  RS+ ++          P+ +  Q     S    SDIDLAAVFA+++   S
Sbjct: 82  PVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRS 141

Query: 138 STKPHVSTSSPES---TDPSDNLTAKNPEIFFEELSDL-----FNQPEDRITKDYENFPF 197
            +    +T S +    T  +  L + + +I  E   DL     FN    +  +D E F  
Sbjct: 142 PSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNNLTQKTKEDQEVFGQ 201

Query: 198 ELQPELTIDELWPSQP-IEQLQEWESFSCNYNAE 211
            LQ +   +E++  Q  ++  +  E   C+++ E
Sbjct: 202 FLQEDR--EEIFEFQGLLDDKEIQEILECSFSEE 233

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.3e-28
Identity = 57/77 (74.03%), Postives = 63/77 (81.82%), Query Frame = 0


Query: 15  AAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVP 74
           A   ER+ +P  EKA NCPRC S NTKFCYYNNYSL QPRYFCK+CRRYWT+GGSLRNVP
Sbjct: 63  AGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVP 122

Query: 75  VGGGCRKTRRSKSSTSS 92
           VGGG RK +RS SS +S
Sbjct: 123 VGGGSRKNKRSSSSAAS 139

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 68/128 (53.12%), Postives = 85/128 (66.41%), Query Frame = 0


Query: 11  PPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 70
           PP  A  +ERK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 71  RNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKFLNTPSSTKPH 130
           RN+PVGGG RK +RS S++SS       S+  +  SS+  +     FA   NTP+   PH
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSS-------SSPSSSSSSKKPL-----FAN-NNTPTPPLPH 144

Query: 131 VSTSSPES 139
           ++    E+
Sbjct: 150 LNPKIGEA 144

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 71/145 (48.97%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 16  AHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPV 75
           A  ER+ +P  EKA NCPRC S NTKFCYYNNYSL QPRYFCK+CRRYWT+GGSLRNVPV
Sbjct: 66  AGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPV 125

Query: 76  GGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKFLNTPSSTKPHVSTSS 135
           GGG RK +RS    SS+++P+  ++                        +ST   VS S 
Sbjct: 126 GGGSRKNKRS----SSSVVPSAAAS------------------------ASTSAAVSGSV 176

Query: 136 PESTDPSDNLTAKNPEIFFEELSDL 161
           P        L AKNP++  E   DL
Sbjct: 186 PV------GLAAKNPKLMHEGAQDL 176

[Close]

BLAST of Cp4.1LG01g20940 vs. NCBI nr
Match: XP_023513410.1 (dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435 bits (1119), Expect = 4.31e-154
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSDHHQISHLPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSC 60
           MSDHHQISHLPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSC
Sbjct: 1   MSDHHQISHLPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSC 60

Query: 61  RRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKF 120
           RRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKF
Sbjct: 61  RRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKF 120

Query: 121 LNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFPFELQ 180
           LNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFPFELQ
Sbjct: 121 LNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFPFELQ 180

Query: 181 PELTIDELWPSQPIEQLQEWESFSCNYNAEFL 212
           PELTIDELWPSQPIEQLQEWESFSCNYNAEFL
Sbjct: 181 PELTIDELWPSQPIEQLQEWESFSCNYNAEFL 212

[Close]

BLAST of Cp4.1LG01g20940 vs. NCBI nr
Match: KAG6602163.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416 bits (1069), Expect = 2.10e-146
Identity = 206/215 (95.81%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MSDHHQISHLPPP----FAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPPP    FAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITE SS+SDIDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSDIDLAAV 120

Query: 121 FAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFP 180
           FAKFLNTP STKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPE RIT DYENFP
Sbjct: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 211
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 215

[Close]

BLAST of Cp4.1LG01g20940 vs. NCBI nr
Match: KAG7032855.1 (Dof zinc finger protein DOF3.5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414 bits (1064), Expect = 1.21e-145
Identity = 205/215 (95.35%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MSDHHQISHLPPP----FAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPPP    FAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPPTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITE SS+S+IDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSQSNIDLAAV 120

Query: 121 FAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFP 180
           FAKFLNTP STKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPE RIT DYENFP
Sbjct: 121 FAKFLNTPPSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 211
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEF 215

[Close]

BLAST of Cp4.1LG01g20940 vs. NCBI nr
Match: XP_022923477.1 (dof zinc finger protein DOF1.2-like [Cucurbita moschata])

HSP 1 Score: 413 bits (1061), Expect = 3.48e-145
Identity = 205/216 (94.91%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MSDHHQISHLPPP----FAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPPP    FAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITE SSRSDIDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSRSDIDLAAV 120

Query: 121 FAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFP 180
           FAKFLNTP STK HVSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPE RIT DYENFP
Sbjct: 121 FAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL 212
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL 216

[Close]

BLAST of Cp4.1LG01g20940 vs. NCBI nr
Match: XP_022989804.1 (dof zinc finger protein DOF1.2-like [Cucurbita maxima])

HSP 1 Score: 404 bits (1038), Expect = 1.16e-141
Identity = 203/217 (93.55%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MSDHHQISHLPP----PFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPP    PFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPSTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSR-SDIDLAA 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVIST+ITE SS  SDIDLAA
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTKITEPSSNGSDIDLAA 120

Query: 121 VFAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENF 180
           VFAKFLNTP STKP VSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITK+YENF
Sbjct: 121 VFAKFLNTPPSTKPRVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKNYENF 180

Query: 181 PFELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL 212
           PF LQPELTIDELWPSQPIEQLQEW+SF CNYNAEFL
Sbjct: 181 PFGLQPELTIDELWPSQPIEQLQEWKSFLCNYNAEFL 217

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy TrEMBL
Match: A0A6J1E679 (dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC111431155 PE=4 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 1.68e-145
Identity = 205/216 (94.91%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MSDHHQISHLPPP----FAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPPP    FAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAV 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITE SSRSDIDLAAV
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSRSDIDLAAV 120

Query: 121 FAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENFP 180
           FAKFLNTP STK HVSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPE RIT DYENFP
Sbjct: 121 FAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFP 180

Query: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL 212
           FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL
Sbjct: 181 FELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL 216

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy TrEMBL
Match: A0A6J1JQE1 (dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111486881 PE=4 SV=1)

HSP 1 Score: 404 bits (1038), Expect = 5.61e-142
Identity = 203/217 (93.55%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MSDHHQISHLPP----PFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQISHLPP    PFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPSTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSR-SDIDLAA 120
           CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVIST+ITE SS  SDIDLAA
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTKITEPSSNGSDIDLAA 120

Query: 121 VFAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKDYENF 180
           VFAKFLNTP STKP VSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITK+YENF
Sbjct: 121 VFAKFLNTPPSTKPRVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDRITKNYENF 180

Query: 181 PFELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL 212
           PF LQPELTIDELWPSQPIEQLQEW+SF CNYNAEFL
Sbjct: 181 PFGLQPELTIDELWPSQPIEQLQEWKSFLCNYNAEFL 217

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy TrEMBL
Match: A0A6J1FHI1 (dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC111445412 PE=4 SV=1)

HSP 1 Score: 266 bits (679), Expect = 6.49e-87
Identity = 151/223 (67.71%), Postives = 171/223 (76.68%), Query Frame = 0


Query: 1   MSDHHQISHLPPP-FAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQ+   PPP FA+HLERKWKPHLE APNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNV---ISTQITEHSSRS-DIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRK+RR++SS SST+  +     STQITE SS   DIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 125

Query: 121 VFAKFLNT-PSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLF----NQPEDR--- 180
           VFA++LNT P ST+ H  TSSPES DP +N      EIFFE LSDL     NQP+++   
Sbjct: 126 VFARYLNTAPPSTEAHALTSSPESVDPLENC-----EIFFEGLSDLLTEEENQPQEQKQG 185

Query: 181 ITKDYENFPFELQPELTIDE-LWPSQPIEQLQEWESFSCNYNA 209
           I  +YEN PF L  EL ++E +W SQ   Q+QE +SFSCNYNA
Sbjct: 186 IMGNYENTPFGLHAELGVEEEVWASQ---QIQELDSFSCNYNA 220

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy TrEMBL
Match: A0A6J1JZV1 (dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111489774 PE=4 SV=1)

HSP 1 Score: 266 bits (679), Expect = 6.71e-87
Identity = 151/224 (67.41%), Postives = 171/224 (76.34%), Query Frame = 0


Query: 1   MSDHHQISHLPPP--FAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCK 60
           MSDHHQ+   PPP  FA+HLERKWKPHLE APNCPRCASANTKFCYYNNYSLSQPRYFCK
Sbjct: 6   MSDHHQLPQPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 65

Query: 61  SCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNV---ISTQITEHSSRS-DIDLA 120
           SCRRYWTKGGSLRNVPVGGGCRK+RR++SS SST+  +     STQITE SS   DIDLA
Sbjct: 66  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA 125

Query: 121 AVFAKFLNT-PSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLF----NQPEDR-- 180
           AVFA++LNT P ST+ H  TSSPES DP +N      EIFFE L+DL     NQP+++  
Sbjct: 126 AVFARYLNTTPPSTEHHTLTSSPESVDPLENC-----EIFFEGLTDLLIEEENQPQEQKQ 185

Query: 181 -ITKDYENFPFELQPELTIDE-LWPSQPIEQLQEWESFSCNYNA 209
            I  +YEN PF L  EL ++E LW SQ   Q+QE +SFSCNYNA
Sbjct: 186 GIMGNYENTPFGLHAELGVEEELWASQ---QIQELDSFSCNYNA 221

[Close]

BLAST of Cp4.1LG01g20940 vs. ExPASy TrEMBL
Match: A0A5A7USP7 (Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00270 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 6.07e-80
Identity = 141/225 (62.67%), Postives = 161/225 (71.56%), Query Frame = 0


Query: 1   MSDHHQISHLPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSC 60
           MSDHHQ+   PPPF +HLERKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCKSC
Sbjct: 1   MSDHHQLPPPPPPFPSHLERKWKPHLETAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSC 60

Query: 61  RRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTIL----PNVISTQITEHSSRSDIDLAAV 120
           RRYWTKGGSLRNVPVGGGCRK+RR+KSS SS I     P++ S      SS SDIDLAAV
Sbjct: 61  RRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSPISRPSKPDLSSQTTDSSSSASDIDLAAV 120

Query: 121 FAKFLNTPSSTKPHVSTSSPESTDPSDNLTAKNPEIFFEELSDLFNQPEDR-------IT 180
           FA+FLN+    +P   TSSPES DP      +  EIF E LSDL  + E++       I 
Sbjct: 121 FARFLNS----EPQALTSSPESVDP-----LEISEIFLEGLSDLLLEDENQREEGKQGIP 180

Query: 181 KDYENFPFELQPELTIDE-LWPSQPI-EQLQEWESFSCNYNAEFL 212
            ++EN  F L+ EL IDE +W SQ + EQ+QE +SFSCNY A  L
Sbjct: 181 GNHENVSFGLETELGIDEEVWASQEMQEQVQELDSFSCNYYANDL 216

[Close]

BLAST of Cp4.1LG01g20940 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-32
Identity = 64/105 (60.95%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 22  WKP----HLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 81
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 82  GCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKFLN 123
           GCRK+RR KSS+ +    ++ +           IDLA V+A FLN
Sbjct: 73  GCRKSRRPKSSSGNNTKTSLTANSGNPGGGSPSIDLALVYANFLN 117

[Close]

BLAST of Cp4.1LG01g20940 vs. TAIR 10
Match: AT1G21340.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-30
Identity = 89/214 (41.59%), Postives = 120/214 (56.07%), Query Frame = 0


Query: 18  LERKWKPHLEK----APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 77
           +  KWK   E+    AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+
Sbjct: 22  IPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNI 81

Query: 78  PVGGGCRKTRRSKSSTSSTI-----LPNVISTQITEHSSR---SDIDLAAVFAKFLNTPS 137
           PVGGGCRK  RS+ ++          P+ +  Q     S    SDIDLAAVFA+++   S
Sbjct: 82  PVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRS 141

Query: 138 STKPHVSTSSPES---TDPSDNLTAKNPEIFFEELSDL-----FNQPEDRITKDYENFPF 197
            +    +T S +    T  +  L + + +I  E   DL     FN    +  +D E F  
Sbjct: 142 PSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNNLTQKTKEDQEVFGQ 201

Query: 198 ELQPELTIDELWPSQP-IEQLQEWESFSCNYNAE 211
            LQ +   +E++  Q  ++  +  E   C+++ E
Sbjct: 202 FLQEDR--EEIFEFQGLLDDKEIQEILECSFSEE 233

[Close]

BLAST of Cp4.1LG01g20940 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 124.8 bits (312), Expect = 8.3e-29
Identity = 68/128 (53.12%), Postives = 85/128 (66.41%), Query Frame = 0


Query: 11  PPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 70
           PP  A  +ERK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 71  RNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEHSSRSDIDLAAVFAKFLNTPSSTKPH 130
           RN+PVGGG RK +RS S++SS       S+  +  SS+  +     FA   NTP+   PH
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSS-------SSPSSSSSSKKPL-----FAN-NNTPTPPLPH 144

Query: 131 VSTSSPES 139
           ++    E+
Sbjct: 150 LNPKIGEA 144

[Close]

BLAST of Cp4.1LG01g20940 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 19  ERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGG 78
           ERK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRN+PVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 79  CRKTRRSKSSTSSTILPNVISTQITEHSSRSD 111
            RK +RS SS+S     +  STQ       SD
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQPATKKHLSD 133

[Close]

BLAST of Cp4.1LG01g20940 vs. TAIR 10
Match: AT2G28510.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 28  KAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKS 87
           +A NCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWTKGG+LRNVPVGGGCR+ +RS S
Sbjct: 46  EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105

Query: 88  STSS 92
           S  S
Sbjct: 106 SAFS 109

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g20940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVC5	3.0e-31	60.95	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]
P68349	4.8e-29	41.59	Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV...	[more]
Q9SXG8	5.3e-28	74.03	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q84JQ8	1.2e-27	53.13	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
B9F1L8	2.0e-27	48.97	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]

BLAST of Cp4.1LG01g20940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513410.1	4.31e-154	100.00	dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6602163.1	2.10e-146	95.81	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032855.1	1.21e-145	95.35	Dof zinc finger protein DOF3.5, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022923477.1	3.48e-145	94.91	dof zinc finger protein DOF1.2-like [Cucurbita moschata]	[more]
XP_022989804.1	1.16e-141	93.55	dof zinc finger protein DOF1.2-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g20940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E679	1.68e-145	94.91	dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC11143115...	[more]
A0A6J1JQE1	5.61e-142	93.55	dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111486881 ...	[more]
A0A6J1FHI1	6.49e-87	67.71	dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC11144541...	[more]
A0A6J1JZV1	6.71e-87	67.41	dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111489774 ...	[more]
A0A5A7USP7	6.07e-80	62.67	Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Cp4.1LG01g20940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52440.1	2.1e-32	60.95	Dof-type zinc finger DNA-binding family protein	[more]
AT1G21340.1	3.4e-30	41.59	Dof-type zinc finger DNA-binding family protein	[more]
AT1G64620.1	8.3e-29	53.13	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	2.4e-28	64.13	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28510.1	1.2e-27	82.81	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 28..84 e-value: 4.6E-32 score: 110.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 32..68
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 30..84 score: 28.574398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..146
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 9..151
None	No IPR available	PANTHER	PTHR31992:SF198	DOF ZINC FINGER PROTEIN DOF1.2	coord: 9..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g20940.1	Cp4.1LG01g20940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding