Cp4.1LG01g20830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGATTCAGAGTCTCACCGGACGACAATCGGGAGCTACCCGAGCAAAATCCGACCGCCCACCACCCGCCCTCCGTCAATGGCAACCACCTTCCTCCAATCGATCCGGTGAAATCAGAGATTGCAACGTTGACGAAGCTTGCAATCCCATATCAGATCTGCGACGGAAAAGCGAAATCTGTGCTTCCATTGATTCCGGCGAAACCAGATACGGCGGTGACGTCGACTAATTCTGTCGGGTACAGAGCCGGCATCGGAAAAGTGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAATCGCTCTTCCGCCCCCGCCGTAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAGTAAAAATGTCGGATTTTTATCATAA ATGCGATTCAGAGTCTCACCGGACGACAATCGGGAGCTACCCGAGCAAAATCCGACCGCCCACCACCCGCCCTCCGTCAATGGCAACCACCTTCCTCCAATCGATCCGGTGAAATCAGAGATTGCAACGTTGACGAAGCTTGCAATCCCATATCAGATCTGCGACGGAAAAGCGAAATCTGTGCTTCCATTGATTCCGGCGAAACCAGATACGGCGGTGACGTCGACTAATTCTGTCGGGTACAGAGCCGGCATCGGAAAAGTGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAATCGCTCTTCCGCCCCCGCCGTAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAGTAAAAATGTCGGATTTTTATCATAA ATGCGATTCAGAGTCTCACCGGACGACAATCGGGAGCTACCCGAGCAAAATCCGACCGCCCACCACCCGCCCTCCGTCAATGGCAACCACCTTCCTCCAATCGATCCGGTGAAATCAGAGATTGCAACGTTGACGAAGCTTGCAATCCCATATCAGATCTGCGACGGAAAAGCGAAATCTGTGCTTCCATTGATTCCGGCGAAACCAGATACGGCGGTGACGTCGACTAATTCTGTCGGGTACAGAGCCGGCATCGGAAAAGTGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAATCGCTCTTCCGCCCCCGCCGTAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAGTAAAAATGTCGGATTTTTATCATAA MRFRVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEIATLTKLAIPYQICDGKAKSVLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRPRRKPTAAAPNPLSMTSKNVGFLS Homology
BLAST of Cp4.1LG01g20830 vs. NCBI nr
Match: KAG6602134.1 (hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 242 bits (617), Expect = 4.98e-80 Identity = 119/129 (92.25%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. NCBI nr
Match: KAG6602131.1 (hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189 bits (479), Expect = 1.45e-58 Identity = 101/161 (62.73%), Postives = 113/161 (70.19%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. NCBI nr
Match: KAG6602132.1 (hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145 bits (366), Expect = 1.17e-41 Identity = 83/144 (57.64%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. NCBI nr
Match: XP_022141661.1 (uncharacterized protein LOC111011963 [Momordica charantia]) HSP 1 Score: 68.2 bits (165), Expect = 1.93e-11 Identity = 46/100 (46.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. NCBI nr
Match: TYK18680.1 (hypothetical protein E5676_scaffold481G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 1.65e-10 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. ExPASy TrEMBL
Match: A0A6J1CJW3 (uncharacterized protein LOC111011963 OS=Momordica charantia OX=3673 GN=LOC111011963 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.35e-12 Identity = 46/100 (46.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. ExPASy TrEMBL
Match: A0A5D3D590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00190 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 7.98e-11 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. ExPASy TrEMBL
Match: A0A0A0KFQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374720 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.55e-09 Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. ExPASy TrEMBL
Match: A0A0A0KDQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374710 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.02e-08 Identity = 34/57 (59.65%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of Cp4.1LG01g20830 vs. ExPASy TrEMBL
Match: A0A0A0KH01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374700 PE=4 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.79e-05 Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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