Cp4.1LG01g19920 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g19920
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Polcalcin
Location	Cp4.1LG01: 17012795 .. 17013049 (+)
RNA-Seq Expression	Cp4.1LG01g19920
Synteny	Cp4.1LG01g19920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

mRNA sequence

ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

Coding sequence (CDS)

ATGTCTGATGATGCTCAAGACAAAGTTGACCGTGACCGTATTTTCAAGCGTTTTGATACCAATGGCGACGGTAAGATCTCTTCAACCGAGCTCGGGGAATCATTGAAAACACTTGGCTCTGTTACCAACGACGAAGTTCATCGGATGATGGCCGAGATCGATACTGATGGCGACGGGTTCATTTCGTATGAAGAATTCACAAATTTCGCCCTTGCCAACCGTGGATTAGTGAAGGATGTTGCAAAGATTTTCTAG

Protein sequence

MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISYEEFTNFALANRGLVKDVAKIF

Homology

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy Swiss-Prot
Match: Q84V36 (Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.4e-31
Identity = 67/82 (81.71%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 3  DDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFIS 62
          D  QD  DR+RIFKRFDTNGDGKISS+ELG++LKTLGSVT DEV RMMAEIDTDGDGFIS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 YEEFTNFALANRGLVKDVAKIF 85
          ++EFT+FA ANRGLVKDV+KIF
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy Swiss-Prot
Match: O81092 (Polcalcin Ole e 3 OS=Olea europaea OX=4146 GN=OLE3 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-30
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD Q+  + +RIFKRFD NGDGKISS+ELGE+LKTLGSVT +E+ RMMAEIDTDGDGF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          IS+EEFT FA ANRGLVKDVAKIF
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy Swiss-Prot
Match: Q8VWY6 (Polcalcin Nic t 1 OS=Nicotiana tabacum OX=4097 GN=Nict1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.9e-30
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M++D QD  DR+RIFKRFD NGDGKISS ELGE+LK LGSVT++EV  MMAE+DTDGDGF
Sbjct: 1  MAEDPQDIADRERIFKRFDLNGDGKISSAELGETLKMLGSVTSEEVQHMMAELDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 85
          ISYEEF  FA ANRGL+KDVAK+F
Sbjct: 61 ISYEEFEEFARANRGLIKDVAKVF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.5e-30
Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MSDD-AQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDG 60
          M+DD  QDK +R+RIFKRFD NGDGKIS+ ELGE+LKTLGS+T DEV  MMAEIDTDGDG
Sbjct: 1  MADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTNFALANRGLVKDVAKIF 85
          FIS++EFT+F  ANRGL+KDVAKIF
Sbjct: 61 FISFQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy Swiss-Prot
Match: O81701 (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-29
Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MSDD-AQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDG 60
          M+DD  QD+ + +RIFK FD NGDGKIS++ELG++LKTLGSVT DEV  MMAEIDTDGDG
Sbjct: 1  MADDHPQDQAEHERIFKCFDANGDGKISASELGDALKTLGSVTPDEVKHMMAEIDTDGDG 60

Query: 61 FISYEEFTNFALANRGLVKDVAKIF 85
          FIS++EFTNFA ANRGLVKDVAKIF
Sbjct: 61 FISFQEFTNFARANRGLVKDVAKIF 85

[Close]

BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: XP_023548959.1 (polcalcin Che a 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168 bits (425), Expect = 2.09e-52
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF
Sbjct: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFTNFALANRGLVKDVAKIF
Sbjct: 61 ISYEEFTNFALANRGLVKDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: XP_022961155.1 (polcalcin Che a 3-like [Cucurbita moschata] >KAG6602031.1 Polcalcin Ole e 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032725.1 Polcalcin Ole e 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166 bits (421), Expect = 8.51e-52
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          MSDDAQDK DRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF
Sbjct: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFTNFALANRGLVKDVAKIF
Sbjct: 61 ISYEEFTNFALANRGLVKDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: XP_022990969.1 (polcalcin Che a 3-like [Cucurbita maxima])

HSP 1 Score: 166 bits (420), Expect = 1.21e-51
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF
Sbjct: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFT+FALANRGLVKDVAKIF
Sbjct: 61 ISYEEFTSFALANRGLVKDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: XP_022141635.1 (polcalcin Bet v 4 [Momordica charantia])

HSP 1 Score: 147 bits (370), Expect = 5.16e-44
Identity = 73/84 (86.90%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QDKV+RDRIFKRFD NGDGKIS+ ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDKVERDRIFKRFDANGDGKISAAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFT+FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. NCBI nr
Match: XP_022939071.1 (polcalcin Ole e 3-like [Cucurbita moschata] >XP_023550375.1 polcalcin Ole e 3-like [Cucurbita pepo subsp. pepo] >KAG6579032.1 Polcalcin Ole e 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016554.1 Polcalcin Ole e 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147 bits (370), Expect = 5.16e-44
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDA+DKVDRDRIFKRFD NGDG+IS++ELGESLKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFT+FA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFACANRGLIRDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy TrEMBL
Match: A0A6J1HBA8 (polcalcin Che a 3-like OS=Cucurbita moschata OX=3662 GN=LOC111461749 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 4.12e-52
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          MSDDAQDK DRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF
Sbjct: 1  MSDDAQDKADRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFTNFALANRGLVKDVAKIF
Sbjct: 61 ISYEEFTNFALANRGLVKDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy TrEMBL
Match: A0A6J1JTH0 (polcalcin Che a 3-like OS=Cucurbita maxima OX=3661 GN=LOC111487704 PE=4 SV=1)

HSP 1 Score: 166 bits (420), Expect = 5.85e-52
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF
Sbjct: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFT+FALANRGLVKDVAKIF
Sbjct: 61 ISYEEFTSFALANRGLVKDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy TrEMBL
Match: A0A6J1CIN1 (polcalcin Bet v 4 OS=Momordica charantia OX=3673 GN=LOC111011942 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 2.50e-44
Identity = 73/84 (86.90%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DD QDKV+RDRIFKRFD NGDGKIS+ ELGE+LKTLGSVT DEV RMMAEIDTDGDGF
Sbjct: 1  MADDPQDKVERDRIFKRFDANGDGKISAAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFT+FA ANRGLVKDVAKIF
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy TrEMBL
Match: A0A6J1FEW4 (polcalcin Ole e 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445082 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 2.50e-44
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDA+DKVDRDRIFKRFD NGDG+IS++ELGESLKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFT+FA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFACANRGLIRDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. ExPASy TrEMBL
Match: A0A6J1JYI8 (polcalcin Ole e 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489454 PE=4 SV=1)

HSP 1 Score: 146 bits (369), Expect = 3.55e-44
Identity = 71/84 (84.52%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  MSDDAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGF 60
          M+DDA+DKVDRDRIFKRFD NGDG+IS++ELGESLKTLGSVT DEV RMMAEIDTDGDG+
Sbjct: 1  MADDAKDKVDRDRIFKRFDANGDGRISASELGESLKTLGSVTPDEVQRMMAEIDTDGDGY 60

Query: 61 ISYEEFTNFALANRGLVKDVAKIF 84
          ISYEEFT+FA ANRGL++DVAKIF
Sbjct: 61 ISYEEFTDFARANRGLIRDVAKIF 84

[Close]

BLAST of Cp4.1LG01g19920 vs. TAIR 10
Match: AT3G03430.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 124.4 bits (311), Expect = 4.3e-29
Identity = 58/81 (71.60%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 4  DAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +K + DRIFK+FD NGDGKIS+ ELG++LK LGSVT++++ RMMAEIDTDGDG+ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISY 62

Query: 64 EEFTNFALANRGLVKDVAKIF 85
          +EF +FA ANRGL+KDVAKIF
Sbjct: 63 QEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of Cp4.1LG01g19920 vs. TAIR 10
Match: AT5G17480.1 (pollen calcium-binding protein 1 )

HSP 1 Score: 124.4 bits (311), Expect = 4.3e-29
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 4  DAQDKVDRDRIFKRFDTNGDGKISSTELGESLKTLGSVTNDEVHRMMAEIDTDGDGFISY 63
          DA +K + DRIFK+FD NGDGKIS+ EL E+LKTLGSVT D+V RMMAEIDTDGDG ISY
Sbjct: 3  DATEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISY 62

Query: 64 EEFTNFALANRGLVKDVAKIF 85
          +EFT+FA ANRGL+KDVAKIF
Sbjct: 63 QEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of Cp4.1LG01g19920 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 64.7 bits (156), Expect = 4.1e-11
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 13 RIFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEFTNFAL 72
          ++F +FD NGDGKIS +ELG   K++G S T +E++R++ EID D DGFI+ EEF     
Sbjct: 23 KVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFATICR 82

Query: 73 ANRGLVK 79
          ++   V+
Sbjct: 83 SSSSAVE 89

[Close]

BLAST of Cp4.1LG01g19920 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 61.6 bits (148), Expect = 3.4e-10
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 0


Query: 12 DRIFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEF 67
          + +FK+FD NGDGKISS ELG  + +LG  V  +E+ + + EID  GDG+I++EEF
Sbjct: 39 EAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEF 94

[Close]

BLAST of Cp4.1LG01g19920 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 61.2 bits (147), Expect = 4.5e-10
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 14  IFKRFDTNGDGKISSTELGESLKTLG-SVTNDEVHRMMAEIDTDGDGFISYEEFTNFALA 73
           +F+ FD +GDG IS  ELGE +K +G  +T +E   M+ E D DGDGF+S+ EF+   +A
Sbjct: 89  VFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFSKMMIA 148

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g19920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84V36	3.4e-31	81.71	Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1	[more]
O81092	1.0e-30	78.57	Polcalcin Ole e 3 OS=Olea europaea OX=4146 GN=OLE3 PE=1 SV=1	[more]
Q8VWY6	2.9e-30	76.19	Polcalcin Nic t 1 OS=Nicotiana tabacum OX=4097 GN=Nict1 PE=1 SV=1	[more]
Q39419	8.5e-30	76.47	Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1	[more]
O81701	4.2e-29	76.47	Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g19920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548959.1	2.09e-52	100.00	polcalcin Che a 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961155.1	8.51e-52	98.81	polcalcin Che a 3-like [Cucurbita moschata] >KAG6602031.1 Polcalcin Ole e 3, par...	[more]
XP_022990969.1	1.21e-51	98.81	polcalcin Che a 3-like [Cucurbita maxima]	[more]
XP_022141635.1	5.16e-44	86.90	polcalcin Bet v 4 [Momordica charantia]	[more]
XP_022939071.1	5.16e-44	84.52	polcalcin Ole e 3-like [Cucurbita moschata] >XP_023550375.1 polcalcin Ole e 3-li...	[more]

BLAST of Cp4.1LG01g19920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBA8	4.12e-52	98.81	polcalcin Che a 3-like OS=Cucurbita moschata OX=3662 GN=LOC111461749 PE=4 SV=1	[more]
A0A6J1JTH0	5.85e-52	98.81	polcalcin Che a 3-like OS=Cucurbita maxima OX=3661 GN=LOC111487704 PE=4 SV=1	[more]
A0A6J1CIN1	2.50e-44	86.90	polcalcin Bet v 4 OS=Momordica charantia OX=3673 GN=LOC111011942 PE=4 SV=1	[more]
A0A6J1FEW4	2.50e-44	84.52	polcalcin Ole e 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445082 PE=4 SV=1	[more]
A0A6J1JYI8	3.55e-44	84.52	polcalcin Ole e 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489454 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g19920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03430.1	4.3e-29	71.60	Calcium-binding EF-hand family protein	[more]
AT5G17480.1	4.3e-29	76.54	pollen calcium-binding protein 1	[more]
AT1G73630.1	4.1e-11	46.27	EF hand calcium-binding protein family	[more]
AT1G24620.1	3.4e-10	51.79	EF hand calcium-binding protein family	[more]
AT3G51920.1	4.5e-10	46.67	calmodulin 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 45..73 e-value: 2.4E-4 score: 30.5 coord: 10..38 e-value: 0.077 score: 22.1
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 13..69 e-value: 1.1E-13 score: 51.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 6..41 score: 13.286007
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 44..76 score: 11.33333
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 13..66 e-value: 6.34396E-15 score: 61.0245
None	No IPR available	GENE3D	1.10.238.10		coord: 2..84 e-value: 2.9E-24 score: 86.8
None	No IPR available	PANTHER	PTHR23064	TROPONIN	coord: 1..84
None	No IPR available	PANTHER	PTHR23064:SF60	POLCALCIN NIC T 1	coord: 1..84
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 19..31
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 13..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g19920.1	Cp4.1LG01g19920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding