Cp4.1LG01g19550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g19550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor TCP21-like
Location	Cp4.1LG01: 16621055 .. 16621852 (-)
RNA-Seq Expression	Cp4.1LG01g19550
Synteny	Cp4.1LG01g19550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTTCTGATGGCGTCGTCACCCACAACAATGGCGCCATAATTCCCCACTCTCAACAGAGCACTCAGACCACCACCAACAATGGCGCTCTGCCTCTCAAAAAACCCCCTGCTAAGGACCGCCACAGCAAGGTCGATGGCCGTGGCCGTCGTATTCGTATGCCCATCATTTGTGCTGCTCGTGTCTTTCAACTCACCCGCGAGTTGGGTCACAAATCCGACGGTCAGACCATTGAGTGGCTCCTCCGTCAAGCAGAGCCTTCCATTATTGCCGCTACCGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATCTGCGCCTCCCTCCGTGGCACTCCTGCCGCTCTTTCCTCTTCAGCTTCTCTCGACCATAAACCCCTTTTGCCTCCTGCCCCTTTCATTCTCGGTAAGCGCGTTAGACCTGACGACGATGCAGGTCATAAAGACAACGACGGCAACGGTGGCGGCGGTGGCGGTAATGGTGGTGGGGGTGCCATTTCTGTCGGCCCTTCTGTTGGTTCTATTATGGGTTCAGCTGCTGCGGGTGGATACTGGGCGTTTCCAGCTAGGCCGGATTTCGGACAGGTATGGAGCTTCGCCGCTGCTGCAGCTCCGGAGATGGTGATTCAACCGACGGCGATTTCTCATCAGGCGTCGTTATTCGCTCAGCAGCAATCAATTGGAGAAGCCTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGTCATCTGAATTTGCTTGCTTCTTTATCAGGTGGACAGGGAAGTTCCGGGCGGAGAGACAACGACCACCGTTGA

mRNA sequence

ATGTCTGCTTCTCTCGACCATAAACCCCTTTTGCCTCCTGCCCCTTTCATTCTCGGTAAGCGCGTTAGACCTGACGACGATGCAGGTCATAAAGACAACGACGGCAACGGTGGCGGCGGTGGCGGTAATGGTGGTGGGGGTGCCATTTCTGTCGGCCCTTCTGTTGGTTCTATTATGGGTTCAGCTGCTGCGGGTGGATACTGGGCGTTTCCAGCTAGGCCGGATTTCGGACAGGTATGGAGCTTCGCCGCTGCTGCAGCTCCGGAGATGGTGATTCAACCGACGGCGATTTCTCATCAGGCGTCGTTATTCGCTCAGCAGCAATCAATTGGAGAAGCCTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGTCATCTGAATTTGCTTGCTTCTTTATCAGGTGGACAGGGAAGTTCCGGGCGGAGAGACAACGACCACCGTTGA

Coding sequence (CDS)

ATGTCTGCTTCTCTCGACCATAAACCCCTTTTGCCTCCTGCCCCTTTCATTCTCGGTAAGCGCGTTAGACCTGACGACGATGCAGGTCATAAAGACAACGACGGCAACGGTGGCGGCGGTGGCGGTAATGGTGGTGGGGGTGCCATTTCTGTCGGCCCTTCTGTTGGTTCTATTATGGGTTCAGCTGCTGCGGGTGGATACTGGGCGTTTCCAGCTAGGCCGGATTTCGGACAGGTATGGAGCTTCGCCGCTGCTGCAGCTCCGGAGATGGTGATTCAACCGACGGCGATTTCTCATCAGGCGTCGTTATTCGCTCAGCAGCAATCAATTGGAGAAGCCTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGTCATCTGAATTTGCTTGCTTCTTTATCAGGTGGACAGGGAAGTTCCGGGCGGAGAGACAACGACCACCGTTGA

Protein sequence

MSASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYLPGHLNLLASLSGGQGSSGRRDNDHR

Homology

[Close]

BLAST of Cp4.1LG01g19550 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 3   ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVG-SIMGS 62
           AS     L   +PF LGKRV   ++           G  G GGGG ++VG ++G S+MG 
Sbjct: 93  ASFSTASLSTSSPFTLGKRVVRAEE-----------GESGGGGGGGLTVGHTMGTSLMGG 152

Query: 63  AAAGGYWAFPARPDFGQVWSFAAAAAPEMVI----QPTAI-----SHQASLFAQQQSIGE 122
             +GG+WA PARPDFGQVWSFA  A PEMV     QP  +       Q +  A   ++GE
Sbjct: 153 GGSGGFWAVPARPDFGQVWSFATGAPPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGE 212

Query: 123 ASAAKVGNYLPG-HLNLLASLSGGQGSSGRRDNDH 147
           ASAA+VGNYLPG HLNLLASLSGG   SGRR++DH
Sbjct: 213 ASAARVGNYLPGHHLNLLASLSGGANGSGRREDDH 236

[Close]

BLAST of Cp4.1LG01g19550 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24
Identity = 76/154 (49.35%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 2   SASLDHKP---LLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSI 61
           S SLDHKP   L   +PFILGKRVR D+D+ +  N                SVG      
Sbjct: 116 STSLDHKPTSLLGGTSPFILGKRVRADEDSNNSHNHS--------------SVGKDE--- 175

Query: 62  MGSAAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQ-----SIGEA 121
             +    G+WA PARPDFGQVWSF  A AP+ +       HQ  LF  QQ     ++GEA
Sbjct: 176 TFTTTPAGFWAVPARPDFGQVWSF--AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEA 235

Query: 122 SAAKVGNYLPGHLNLLASLSGGQGSSGRRDNDHR 148
           SAA+VGNYLPGHLNLLASLSGG   S RR+ D R
Sbjct: 236 SAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of Cp4.1LG01g19550 vs. NCBI nr
Match: XP_022923377.1 (transcription factor TCP21-like [Cucurbita moschata] >KAG6601984.1 Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032682.1 Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278 bits (710), Expect = 3.83e-92
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 2   SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 61
           SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS
Sbjct: 119 SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 178

Query: 62  AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 121
           AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY
Sbjct: 179 AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 238

Query: 122 LPGHLNLLASLSGGQGSSGRRDNDHR 147
           LPGHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 239 LPGHLNLLASLSGGQGSSGRRDNDHR 264

[Close]

BLAST of Cp4.1LG01g19550 vs. NCBI nr
Match: XP_023520182.1 (transcription factor TCP21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278 bits (710), Expect = 3.96e-92
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 2   SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 61
           SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS
Sbjct: 120 SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 179

Query: 62  AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 121
           AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY
Sbjct: 180 AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 239

Query: 122 LPGHLNLLASLSGGQGSSGRRDNDHR 147
           LPGHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 240 LPGHLNLLASLSGGQGSSGRRDNDHR 265

[Close]

BLAST of Cp4.1LG01g19550 vs. NCBI nr
Match: XP_022990893.1 (transcription factor TCP21-like [Cucurbita maxima])

HSP 1 Score: 266 bits (681), Expect = 3.49e-87
Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 3   ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSA 62
           ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDG GGGGGGNGGGGAISVGPSVGSIMGSA
Sbjct: 160 ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDG-GGGGGGNGGGGAISVGPSVGSIMGSA 219

Query: 63  AAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL 122
           AAGGYWAFPAR DFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL
Sbjct: 220 AAGGYWAFPARSDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL 279

Query: 123 PGHLNLLASLSGGQGSSGRRDNDHR 147
           PGHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 280 PGHLNLLASLSGGQGSSGRRDNDHR 303

[Close]

BLAST of Cp4.1LG01g19550 vs. NCBI nr
Match: XP_038876310.1 (transcription factor TCP21-like [Benincasa hispida])

HSP 1 Score: 219 bits (558), Expect = 4.43e-69
Identity = 116/145 (80.00%), Postives = 123/145 (84.83%), Query Frame = 0


Query: 2   SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 61
           S+SLDHKPLL PAPFILGKRVR DDD  +KD+ G          GG ISVGP++GSIMG 
Sbjct: 127 SSSLDHKPLLAPAPFILGKRVRTDDDGANKDDSG----------GGGISVGPTIGSIMGP 186

Query: 62  AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 121
           AA GGYWA PAR DFGQVWSFAAAAAPEMVIQPTA+SHQASLF QQQS+GEASAAKVGNY
Sbjct: 187 AATGGYWAIPARSDFGQVWSFAAAAAPEMVIQPTAVSHQASLFVQQQSMGEASAAKVGNY 246

Query: 122 LPGHLNLLASLSGGQGSSGRRDNDH 146
           LPGHLNLLASLSGG GSSGRRDNDH
Sbjct: 247 LPGHLNLLASLSGGPGSSGRRDNDH 261

[Close]

BLAST of Cp4.1LG01g19550 vs. NCBI nr
Match: XP_022938451.1 (transcription factor TCP21-like [Cucurbita moschata])

HSP 1 Score: 214 bits (546), Expect = 2.21e-67
Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 0


Query: 2   SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 61
           ++SLDHKPLL PAPFILGKRVR DDD  +KD DG+GGGGGG    G +SVG +V S MG+
Sbjct: 111 ASSLDHKPLLAPAPFILGKRVRTDDDGDNKD-DGSGGGGGG----GGVSVGSTVSSFMGT 170

Query: 62  AAAGGYWAFPARPDFGQVWSFAAAAA--PEMVIQPTAISHQASLFAQQQSIGEASAAKVG 121
           AAAGGYWA P RPDFGQVWSFAAAAA  PEMVIQPTA+SH ASLF QQQS+GEASAAKVG
Sbjct: 171 AAAGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVG 230

Query: 122 NYLPGHLNLLASLSGGQGSSGRRDNDHR 147
           NYLPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 231 NYLPGHLNLLASLSGGPGSSGRRDNDHR 253

[Close]

BLAST of Cp4.1LG01g19550 vs. ExPASy TrEMBL
Match: A0A6J1E5Y0 (transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111431092 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 1.85e-92
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 2   SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 61
           SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS
Sbjct: 119 SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 178

Query: 62  AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 121
           AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY
Sbjct: 179 AAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 238

Query: 122 LPGHLNLLASLSGGQGSSGRRDNDHR 147
           LPGHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 239 LPGHLNLLASLSGGQGSSGRRDNDHR 264

[Close]

BLAST of Cp4.1LG01g19550 vs. ExPASy TrEMBL
Match: A0A6J1JUL9 (transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111487646 PE=4 SV=1)

HSP 1 Score: 266 bits (681), Expect = 1.69e-87
Identity = 143/145 (98.62%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 3   ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSA 62
           ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDG GGGGGGNGGGGAISVGPSVGSIMGSA
Sbjct: 160 ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDG-GGGGGGNGGGGAISVGPSVGSIMGSA 219

Query: 63  AAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL 122
           AAGGYWAFPAR DFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL
Sbjct: 220 AAGGYWAFPARSDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQSIGEASAAKVGNYL 279

Query: 123 PGHLNLLASLSGGQGSSGRRDNDHR 147
           PGHLNLLASLSGGQGSSGRRDNDHR
Sbjct: 280 PGHLNLLASLSGGQGSSGRRDNDHR 303

[Close]

BLAST of Cp4.1LG01g19550 vs. ExPASy TrEMBL
Match: A0A6J1FD69 (transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111444685 PE=4 SV=1)

HSP 1 Score: 214 bits (546), Expect = 1.07e-67
Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 0


Query: 2   SASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGS 61
           ++SLDHKPLL PAPFILGKRVR DDD  +KD DG+GGGGGG    G +SVG +V S MG+
Sbjct: 111 ASSLDHKPLLAPAPFILGKRVRTDDDGDNKD-DGSGGGGGG----GGVSVGSTVSSFMGT 170

Query: 62  AAAGGYWAFPARPDFGQVWSFAAAAA--PEMVIQPTAISHQASLFAQQQSIGEASAAKVG 121
           AAAGGYWA P RPDFGQVWSFAAAAA  PEMVIQPTA+SH ASLF QQQS+GEASAAKVG
Sbjct: 171 AAAGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVG 230

Query: 122 NYLPGHLNLLASLSGGQGSSGRRDNDHR 147
           NYLPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 231 NYLPGHLNLLASLSGGPGSSGRRDNDHR 253

[Close]

BLAST of Cp4.1LG01g19550 vs. ExPASy TrEMBL
Match: A0A0A0KMY3 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G352090 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 6.09e-67
Identity = 119/151 (78.81%), Postives = 125/151 (82.78%), Query Frame = 0


Query: 2   SASL-DHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMG 61
           +ASL DHKPLLPPAPFILGKRVR DDD  +KD+ G        G G  ISVGPS+GSIMG
Sbjct: 122 AASLSDHKPLLPPAPFILGKRVRTDDDGANKDDTG--------GAGAGISVGPSIGSIMG 181

Query: 62  SAAAGGYWAFPARPDFGQVWSFAAAAA----PEMVIQPTAISHQASLFAQQQSIGEASAA 121
            A AGGYWA PAR DFGQVWSFAAAAA    PEMVIQPTA+SHQASLF QQQS+GEASAA
Sbjct: 182 PAVAGGYWAIPARSDFGQVWSFAAAAAAAAAPEMVIQPTAVSHQASLFVQQQSMGEASAA 241

Query: 122 KVGNYLPGHLNLLASLSGGQGSSGRRDNDHR 147
           KVGNYLPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 242 KVGNYLPGHLNLLASLSGGPGSSGRRDNDHR 264

[Close]

BLAST of Cp4.1LG01g19550 vs. ExPASy TrEMBL
Match: A0A1S3CJ76 (transcription factor TCP21-like OS=Cucumis melo OX=3656 GN=LOC103501575 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 8.90e-67
Identity = 116/146 (79.45%), Postives = 121/146 (82.88%), Query Frame = 0


Query: 6   DHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSIMGSAAAG 65
           DHKPLLPPAPFILGKRVR DDD  +KD+ G        G G  ISVGPS+GSIMG A AG
Sbjct: 128 DHKPLLPPAPFILGKRVRTDDDVANKDDTG--------GAGAGISVGPSIGSIMGPAVAG 187

Query: 66  GYWAFPARPDFGQVWSFAAAAA----PEMVIQPTAISHQASLFAQQQSIGEASAAKVGNY 125
           GYWA PAR DFGQVWSFAAAAA    PEMVIQPTA+SHQASLF QQQS+GEASAAKVGNY
Sbjct: 188 GYWAIPARSDFGQVWSFAAAAAAAAAPEMVIQPTAVSHQASLFVQQQSMGEASAAKVGNY 247

Query: 126 LPGHLNLLASLSGGQGSSGRRDNDHR 147
           LPGHLNLLASLSGG GSSGRRDNDHR
Sbjct: 248 LPGHLNLLASLSGGPGSSGRRDNDHR 265

[Close]

BLAST of Cp4.1LG01g19550 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 117.5 bits (293), Expect = 9.2e-27
Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 3   ASLDHKPLLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVG-SIMGS 62
           AS     L   +PF LGKRV   ++           G  G GGGG ++VG ++G S+MG 
Sbjct: 93  ASFSTASLSTSSPFTLGKRVVRAEE-----------GESGGGGGGGLTVGHTMGTSLMGG 152

Query: 63  AAAGGYWAFPARPDFGQVWSFAAAAAPEMVI----QPTAI-----SHQASLFAQQQSIGE 122
             +GG+WA PARPDFGQVWSFA  A PEMV     QP  +       Q +  A   ++GE
Sbjct: 153 GGSGGFWAVPARPDFGQVWSFATGAPPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGE 212

Query: 123 ASAAKVGNYLPG-HLNLLASLSGGQGSSGRRDNDH 147
           ASAA+VGNYLPG HLNLLASLSGG   SGRR++DH
Sbjct: 213 ASAARVGNYLPGHHLNLLASLSGGANGSGRREDDH 236

[Close]

BLAST of Cp4.1LG01g19550 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 76/154 (49.35%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 2   SASLDHKP---LLPPAPFILGKRVRPDDDAGHKDNDGNGGGGGGNGGGGAISVGPSVGSI 61
           S SLDHKP   L   +PFILGKRVR D+D+ +  N                SVG      
Sbjct: 116 STSLDHKPTSLLGGTSPFILGKRVRADEDSNNSHNHS--------------SVGKDE--- 175

Query: 62  MGSAAAGGYWAFPARPDFGQVWSFAAAAAPEMVIQPTAISHQASLFAQQQ-----SIGEA 121
             +    G+WA PARPDFGQVWSF  A AP+ +       HQ  LF  QQ     ++GEA
Sbjct: 176 TFTTTPAGFWAVPARPDFGQVWSF--AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEA 235

Query: 122 SAAKVGNYLPGHLNLLASLSGGQGSSGRRDNDHR 148
           SAA+VGNYLPGHLNLLASLSGG   S RR+ D R
Sbjct: 236 SAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR 250

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g19550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FTA2	1.3e-25	50.32	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q9FMX2	2.5e-24	49.35	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g19550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923377.1	3.83e-92	100.00	transcription factor TCP21-like [Cucurbita moschata] >KAG6601984.1 Transcription...	[more]
XP_023520182.1	3.96e-92	100.00	transcription factor TCP21-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990893.1	3.49e-87	98.62	transcription factor TCP21-like [Cucurbita maxima]	[more]
XP_038876310.1	4.43e-69	80.00	transcription factor TCP21-like [Benincasa hispida]	[more]
XP_022938451.1	2.21e-67	80.41	transcription factor TCP21-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g19550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5Y0	1.85e-92	100.00	transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111431092 PE...	[more]
A0A6J1JUL9	1.69e-87	98.62	transcription factor TCP21-like OS=Cucurbita maxima OX=3661 GN=LOC111487646 PE=4...	[more]
A0A6J1FD69	1.07e-67	80.41	transcription factor TCP21-like OS=Cucurbita moschata OX=3662 GN=LOC111444685 PE...	[more]
A0A0A0KMY3	6.09e-67	78.81	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G352090 PE=4 SV...	[more]
A0A1S3CJ76	8.90e-67	79.45	transcription factor TCP21-like OS=Cucumis melo OX=3656 GN=LOC103501575 PE=4 SV=...	[more]

BLAST of Cp4.1LG01g19550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08330.1	9.2e-27	50.32	TCP family transcription factor	[more]
AT5G23280.1	1.7e-25	49.35	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR31072:SF165	TRANSCRIPTION FACTOR TCP FAMILY-RELATED	coord: 2..144
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 2..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g19550.1	Cp4.1LG01g19550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding