Cp4.1LG01g19260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g19260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ethylene-responsive transcription factor LEP-like
Location	Cp4.1LG01: 16482714 .. 16483382 (+)
RNA-Seq Expression	Cp4.1LG01g19260
Synteny	Cp4.1LG01g19260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCATCGCCGTCAAAACCCAAGAGAAAGCAGCAGCAGCCGCCGCCGGAAACGACGCCCCACCGTTTCCTCGGAGTCCGACGGCGGCCATGGGGCCGATACGCCGCCGAGATCAGGGACCCTTCCACCAAAGAGCGTCACTGGCTCGGAACCTTCGACACCGCCGAGGAGGCCGCAGTCGCTTACGACTGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCTCGTACCAATTTCCTCTACTCCGATTCTCTCCCCCCTCCGCCGCCACCTCCCTCCGCCGCCCTCCCTCCCAATCAAGCTCCTCTGCTTCTGCCTACTCCACCGCCTCATTTCCACCAAATCCCCCCTTCCAGAGACTCGCCGCCAAGCCTCTTCTCCGTCGACGGAGACGGCGGCGCTGAACTCCCGCCGTTTCCTCCCGCGATTTCGTCGGAATCCGAGAATTACAATTACAATTACAATTATAATCAGGGTTTAATGGAATTGCAGAACTCTGGATTTGAATATTTCGATCAGTCTCCGACTGACATCGGATCGTGTTTCGGATTTGATTCGAGCAGCGAGTACGTGCATGGCCCGATCTTCGGCTCAATGCCGGCTGTTTCCGACGCCGGCGCCGGCGAGTTTCTGTCTCCGGCGGCTAATTTCTATTTCCCTCAGTCTTGA

mRNA sequence

ATGAGTCCATCGCCGTCAAAACCCAAGAGAAAGCAGCAGCAGCCGCCGCCGGAAACGACGCCCCACCGTTTCCTCGGAGTCCGACGGCGGCCATGGGGCCGATACGCCGCCGAGATCAGGGACCCTTCCACCAAAGAGCGTCACTGGCTCGGAACCTTCGACACCGCCGAGGAGGCCGCAGTCGCTTACGACTGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCTCGTACCAATTTCCTCTACTCCGATTCTCTCCCCCCTCCGCCGCCACCTCCCTCCGCCGCCCTCCCTCCCAATCAAGCTCCTCTGCTTCTGCCTACTCCACCGCCTCATTTCCACCAAATCCCCCCTTCCAGAGACTCGCCGCCAAGCCTCTTCTCCGTCGACGGAGACGGCGGCGCTGAACTCCCGCCGTTTCCTCCCGCGATTTCGTCGGAATCCGAGAATTACAATTACAATTACAATTATAATCAGGGTTTAATGGAATTGCAGAACTCTGGATTTGAATATTTCGATCAGTCTCCGACTGACATCGGATCGTGTTTCGGATTTGATTCGAGCAGCGAGTACGTGCATGGCCCGATCTTCGGCTCAATGCCGGCTGTTTCCGACGCCGGCGCCGGCGAGTTTCTGTCTCCGGCGGCTAATTTCTATTTCCCTCAGTCTTGA

Coding sequence (CDS)

ATGAGTCCATCGCCGTCAAAACCCAAGAGAAAGCAGCAGCAGCCGCCGCCGGAAACGACGCCCCACCGTTTCCTCGGAGTCCGACGGCGGCCATGGGGCCGATACGCCGCCGAGATCAGGGACCCTTCCACCAAAGAGCGTCACTGGCTCGGAACCTTCGACACCGCCGAGGAGGCCGCAGTCGCTTACGACTGCGCCGCCCGCTCCCTCCGCGGCTCCCTCGCTCGTACCAATTTCCTCTACTCCGATTCTCTCCCCCCTCCGCCGCCACCTCCCTCCGCCGCCCTCCCTCCCAATCAAGCTCCTCTGCTTCTGCCTACTCCACCGCCTCATTTCCACCAAATCCCCCCTTCCAGAGACTCGCCGCCAAGCCTCTTCTCCGTCGACGGAGACGGCGGCGCTGAACTCCCGCCGTTTCCTCCCGCGATTTCGTCGGAATCCGAGAATTACAATTACAATTACAATTATAATCAGGGTTTAATGGAATTGCAGAACTCTGGATTTGAATATTTCGATCAGTCTCCGACTGACATCGGATCGTGTTTCGGATTTGATTCGAGCAGCGAGTACGTGCATGGCCCGATCTTCGGCTCAATGCCGGCTGTTTCCGACGCCGGCGCCGGCGAGTTTCTGTCTCCGGCGGCTAATTTCTATTTCCCTCAGTCTTGA

Protein sequence

MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRDSPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS

Homology

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy Swiss-Prot
Match: Q9M644 (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=LEP PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-31
Identity = 96/214 (44.86%), Postives = 121/214 (56.54%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           M+ + SK K+KQ     +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEAA
Sbjct: 1   MNTTSSKSKKKQD----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           +AYD AARS+RG+ ARTNF+YSD +PP     S   P +  P   P PPP     PPS D
Sbjct: 61  LAYDRAARSMRGTRARTNFVYSD-MPPSSSVTSIVSPDDPPP---PPPPP----APPSND 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDI-G 180
               +   +     + P   P    + ++Y +  + +       N         P+D+  
Sbjct: 121 PVDYMMMFNQYSSTDSPMLQPH-CDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSN 180

Query: 181 SCF--------GFDSSSEYVHGPIFGSMPAVSDA 206
           SC+        G D SSEYVH P+F  MP VSD+
Sbjct: 181 SCYSQPQWTWTGDDYSSEYVHSPMFSRMPPVSDS 201

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy Swiss-Prot
Match: Q9FYK5 (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana OX=3702 GN=ESR2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 23  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLARTNFLY 82
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYDCAAR++RG  ARTNF+Y
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy Swiss-Prot
Match: Q3E703 (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 GN=ERF088 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.9e-22
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 1  MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
          M  S +K K K+++   E    ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA
Sbjct: 1  MLKSSNKRKSKEEKKLQE---GKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAA 60

Query: 61 VAYDCAARSLRGSLARTNFLYSDS 85
           AYD AARS+ GSLA TNF Y+++
Sbjct: 61 FAYDVAARSISGSLATTNFFYTEN 81

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy Swiss-Prot
Match: Q8H3Q1 (Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=39947 GN=FZP PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-21
Identity = 71/162 (43.83%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 5   PSKPKRKQQQPPPE-------TTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 64
           PS P     + PP          P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA+
Sbjct: 32  PSPPSSPMSERPPSGRSRRRAQEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQ 91

Query: 65  EAAVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPP 124
           EAA+AYD AA S++G+ ARTNF+Y+ +    PP     L P  AP           Q   
Sbjct: 92  EAALAYDRAALSMKGAQARTNFVYTHAAYNYPP----FLAPFHAP-----------QYAA 151

Query: 125 SRDSPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQG 160
           +  +P S+    G G A      P I S   ++++++++  G
Sbjct: 152 AAAAPSSVQYGGGVGAA------PHIGSYGHHHHHHHHHGHG 172

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy Swiss-Prot
Match: Q6J9Q2 (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 GN=ERF086 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 3.8e-21
Identity = 59/100 (59.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 18  ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLART 77
           +  P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAA+AYD AA S+RG+ ART
Sbjct: 49  QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQART 108

Query: 78  NFLYSDS-----LPPPPPPPSAALPPNQAPLLLPTPPPHF 113
           NF+Y+ +     L  P        P N     LP   P F
Sbjct: 109 NFVYTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSPQF 148

[Close]

BLAST of Cp4.1LG01g19260 vs. NCBI nr
Match: XP_023541749.1 (ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450 bits (1158), Expect = 1.05e-159
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIGS 180
           SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIGS
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIGS 180

Query: 181 CFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
           CFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS
Sbjct: 181 CFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222

[Close]

BLAST of Cp4.1LG01g19260 vs. NCBI nr
Match: XP_022990620.1 (ethylene-responsive transcription factor LEP-like [Cucurbita maxima])

HSP 1 Score: 436 bits (1122), Expect = 3.25e-154
Identity = 216/222 (97.30%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETT HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTSHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIGS 180
           SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQS T+IGS
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSSTEIGS 180

Query: 181 CFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
           CFGFDSSSEYVHGPIF SMPAVSDAGAG+F SPAANFYFPQS
Sbjct: 181 CFGFDSSSEYVHGPIFSSMPAVSDAGAGDFPSPAANFYFPQS 222

[Close]

BLAST of Cp4.1LG01g19260 vs. NCBI nr
Match: XP_022963669.1 (ethylene-responsive transcription factor LEP-like [Cucurbita moschata] >KAG6601967.1 Ethylene-responsive transcription factor LEP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436 bits (1121), Expect = 5.33e-154
Identity = 218/226 (96.46%), Postives = 220/226 (97.35%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYN----QGLMELQNSGFEYFDQSPT 180
           SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYN    QGLMELQNSGFEYF+QSPT
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNYNYNQGLMELQNSGFEYFNQSPT 180

Query: 181 DIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
           +IGSCFGFDSSSEYVHGPIF SMPAVSDAGAGEF SPAANFYFPQS
Sbjct: 181 EIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS 226

[Close]

BLAST of Cp4.1LG01g19260 vs. NCBI nr
Match: KAG7032663.1 (Ethylene-responsive transcription factor LEP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (855), Expect = 3.38e-114
Identity = 176/222 (79.28%), Postives = 176/222 (79.28%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIGS 180
           SPPSLFSVDGDGGAELPPFPPAIS                                    
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAIS------------------------------------ 178

Query: 181 CFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
                   EYVHGPIF SMPAVSDAGAGEF SPAANFYFPQS
Sbjct: 181 --------EYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS 178

[Close]

BLAST of Cp4.1LG01g19260 vs. NCBI nr
Match: KAA0066104.1 (ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa] >TYK15143.1 ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa])

HSP 1 Score: 306 bits (785), Expect = 8.77e-103
Identity = 166/228 (72.81%), Postives = 179/228 (78.51%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPP-ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK   PPP E TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPT----PPPHFHQI 120
           A+AYD AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL LP     PPP FHQ 
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120

Query: 121 PPSRDSPPSLFSVDGDGG-AELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQS 180
           PP+ DSP  +   D DG  AELPPFPPAISSESEN +YN   N G ME QN GFE FDQS
Sbjct: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYN---NYGAMESQNVGFECFDQS 180

Query: 181 PTDIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
              +GSC GFDSS +Y++ P+ GSM  VSDAG G+  SPAANFY PQS
Sbjct: 181 SIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQS 225

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy TrEMBL
Match: A0A6J1JQK9 (ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN=LOC111487448 PE=4 SV=1)

HSP 1 Score: 436 bits (1122), Expect = 1.57e-154
Identity = 216/222 (97.30%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETT HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTSHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIGS 180
           SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQS T+IGS
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSSTEIGS 180

Query: 181 CFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
           CFGFDSSSEYVHGPIF SMPAVSDAGAG+F SPAANFYFPQS
Sbjct: 181 CFGFDSSSEYVHGPIFSSMPAVSDAGAGDFPSPAANFYFPQS 222

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy TrEMBL
Match: A0A6J1HKV8 (ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 GN=LOC111463929 PE=4 SV=1)

HSP 1 Score: 436 bits (1121), Expect = 2.58e-154
Identity = 218/226 (96.46%), Postives = 220/226 (97.35%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD
Sbjct: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYN----QGLMELQNSGFEYFDQSPT 180
           SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYN    QGLMELQNSGFEYF+QSPT
Sbjct: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNYNYNQGLMELQNSGFEYFNQSPT 180

Query: 181 DIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
           +IGSCFGFDSSSEYVHGPIF SMPAVSDAGAGEF SPAANFYFPQS
Sbjct: 181 EIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS 226

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy TrEMBL
Match: A0A5A7VFL7 (Ethylene-responsive transcription factor LEP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00060 PE=4 SV=1)

HSP 1 Score: 306 bits (785), Expect = 4.25e-103
Identity = 166/228 (72.81%), Postives = 179/228 (78.51%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPP-ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK   PPP E TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPT----PPPHFHQI 120
           A+AYD AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL LP     PPP FHQ 
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120

Query: 121 PPSRDSPPSLFSVDGDGG-AELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQS 180
           PP+ DSP  +   D DG  AELPPFPPAISSESEN +YN   N G ME QN GFE FDQS
Sbjct: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYN---NYGAMESQNVGFECFDQS 180

Query: 181 PTDIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
              +GSC GFDSS +Y++ P+ GSM  VSDAG G+  SPAANFY PQS
Sbjct: 181 SIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQS 225

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy TrEMBL
Match: A0A1S3AU89 (ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC103483013 PE=4 SV=1)

HSP 1 Score: 290 bits (741), Expect = 2.03e-96
Identity = 156/223 (69.96%), Postives = 169/223 (75.78%), Query Frame = 0


Query: 5   PSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYD 64
           P  PK      P E TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA+AYD
Sbjct: 5   PQNPKESTTPAPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYD 64

Query: 65  CAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPT----PPPHFHQIPPSRD 124
            AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL LP     PPP FHQ PP+ D
Sbjct: 65  RAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAGD 124

Query: 125 SPPSLFSVDGDGG-AELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDIG 184
           SP  +   D DG  AELPPFPPAISSESEN +YN   N G ME QN GFE FDQS   +G
Sbjct: 125 SPSGIIYGDYDGSSAELPPFPPAISSESENCDYN---NYGAMESQNVGFECFDQSSIGMG 184

Query: 185 SCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222
           SC GFDSS +Y++ P+ GSM  VSDAG G+  SPAANFY PQS
Sbjct: 185 SCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQS 224

[Close]

BLAST of Cp4.1LG01g19260 vs. ExPASy TrEMBL
Match: A0A6J1CKI8 (ethylene-responsive transcription factor LEP OS=Momordica charantia OX=3673 GN=LOC111011985 PE=4 SV=1)

HSP 1 Score: 286 bits (731), Expect = 6.07e-95
Identity = 165/230 (71.74%), Postives = 171/230 (74.35%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           MSPSPSKPKRKQ  PPPET  HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA
Sbjct: 1   MSPSPSKPKRKQPPPPPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAAL-----------PPNQAPLLLPTPP 120
           +AYD AARSLRGSLARTNFLYSDS  PPP PPSAA+           PP   PLL P  P
Sbjct: 61  LAYDRAARSLRGSLARTNFLYSDS--PPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPDSP 120

Query: 121 PHFHQIPPSRDSPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFE 180
           P F Q P + DS  S F+   DGGAELPPFPPAISSESENYNYN      LME QN G E
Sbjct: 121 PLFDQFPAAGDSSASFFAGFDDGGAELPPFPPAISSESENYNYN----NCLMETQNIGLE 180

Query: 181 YFDQSPTDIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYF 219
             DQS   IGS FGFDS  EYV  PIFG+MPAVSDA A +F SPA NFYF
Sbjct: 181 SLDQSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESPA-NFYF 223

[Close]

BLAST of Cp4.1LG01g19260 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-32
Identity = 96/214 (44.86%), Postives = 121/214 (56.54%), Query Frame = 0


Query: 1   MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
           M+ + SK K+KQ     +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEAA
Sbjct: 1   MNTTSSKSKKKQD----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAA 60

Query: 61  VAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPTPPPHFHQIPPSRD 120
           +AYD AARS+RG+ ARTNF+YSD +PP     S   P +  P   P PPP     PPS D
Sbjct: 61  LAYDRAARSMRGTRARTNFVYSD-MPPSSSVTSIVSPDDPPP---PPPPP----APPSND 120

Query: 121 SPPSLFSVDGDGGAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQSPTDI-G 180
               +   +     + P   P    + ++Y +  + +       N         P+D+  
Sbjct: 121 PVDYMMMFNQYSSTDSPMLQPH-CDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSN 180

Query: 181 SCF--------GFDSSSEYVHGPIFGSMPAVSDA 206
           SC+        G D SSEYVH P+F  MP VSD+
Sbjct: 181 SCYSQPQWTWTGDDYSSEYVHSPMFSRMPPVSDS 201

[Close]

BLAST of Cp4.1LG01g19260 vs. TAIR 10
Match: AT1G24590.1 (DORNROSCHEN-like )

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-23
Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 23  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLARTNFLY 82
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYDCAAR++RG  ARTNF+Y
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

[Close]

BLAST of Cp4.1LG01g19260 vs. TAIR 10
Match: AT1G12890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-23
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 1  MSPSPSKPKRKQQQPPPETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAA 60
          M  S +K K K+++   E    ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA
Sbjct: 1  MLKSSNKRKSKEEKKLQE---GKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAA 60

Query: 61 VAYDCAARSLRGSLARTNFLYSDS 85
           AYD AARS+ GSLA TNF Y+++
Sbjct: 61 FAYDVAARSISGSLATTNFFYTEN 81

[Close]

BLAST of Cp4.1LG01g19260 vs. TAIR 10
Match: AT5G18560.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-22
Identity = 59/100 (59.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 18  ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAVAYDCAARSLRGSLART 77
           +  P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAA+AYD AA S+RG+ ART
Sbjct: 49  QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQART 108

Query: 78  NFLYSDS-----LPPPPPPPSAALPPNQAPLLLPTPPPHF 113
           NF+Y+ +     L  P        P N     LP   P F
Sbjct: 109 NFVYTPTDVHTILTNPNLHSLIVSPYNNNQSFLPNSSPQF 148

[Close]

BLAST of Cp4.1LG01g19260 vs. TAIR 10
Match: AT1G28160.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-21
Identity = 79/197 (40.10%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 2   SPSPSKPKRKQQQPPPETTPH----RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE 61
           S S    ++KQQQP P+   H    +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAE
Sbjct: 13  SRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAE 72

Query: 62  EAAVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLL--LPTPPPHFHQI 121
           EAA+AYD AARS+RG  ARTNF+YSD +P      S   P      +  L  PP      
Sbjct: 73  EAALAYDRAARSIRGLTARTNFVYSD-MPRGSSVTSFVSPDESQRFISELFNPPSQLEAT 132

Query: 122 PPSRDSPPSLFSVDGDGGAELPPFPPAISSESENYN-YNYNYNQGLMELQ------NSGF 181
             + ++  +L+S                S+ ++N N   ++YN    E +       S  
Sbjct: 133 NSNNNNNNNLYS----------------STNNQNQNSIEFSYNGWPQEAECGYQSITSNA 192

Query: 182 EYFDQS--PTDIGSCFG 184
           E+ D    P    +CFG
Sbjct: 193 EHCDHELPPLPPSTCFG 192

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g19260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M644	2.4e-31	44.86	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FYK5	3.5e-22	81.36	Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E703	5.9e-22	65.48	Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H3Q1	1.7e-21	43.83	Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=...	[more]
Q6J9Q2	3.8e-21	59.00	Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG01g19260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541749.1	1.05e-159	100.00	ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990620.1	3.25e-154	97.30	ethylene-responsive transcription factor LEP-like [Cucurbita maxima]	[more]
XP_022963669.1	5.33e-154	96.46	ethylene-responsive transcription factor LEP-like [Cucurbita moschata] >KAG66019...	[more]
KAG7032663.1	3.38e-114	79.28	Ethylene-responsive transcription factor LEP, partial [Cucurbita argyrosperma su...	[more]
KAA0066104.1	8.77e-103	72.81	ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa] >TYK1514...	[more]

BLAST of Cp4.1LG01g19260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQK9	1.57e-154	97.30	ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HKV8	2.58e-154	96.46	ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A5A7VFL7	4.25e-103	72.81	Ethylene-responsive transcription factor LEP OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3AU89	2.03e-96	69.96	ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1CKI8	6.07e-95	71.74	ethylene-responsive transcription factor LEP OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Cp4.1LG01g19260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13910.1	1.7e-32	44.86	Integrase-type DNA-binding superfamily protein	[more]
AT1G24590.1	2.5e-23	81.36	DORNROSCHEN-like	[more]
AT1G12890.1	4.2e-23	65.48	Integrase-type DNA-binding superfamily protein	[more]
AT5G18560.1	2.7e-22	59.00	Integrase-type DNA-binding superfamily protein	[more]
AT1G28160.1	2.3e-21	40.10	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 46..62 score: 68.66 coord: 24..35 score: 53.33
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 4.7E-32 score: 122.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 26..72 e-value: 1.1E-11 score: 44.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 20.507723
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..79 e-value: 9.19609E-30 score: 103.505
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..81 e-value: 5.4E-24 score: 86.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 132..210
None	No IPR available	PANTHER	PTHR31677:SF118	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	coord: 132..210 coord: 8..83
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 8..83
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 24..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g19260.1	Cp4.1LG01g19260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity