Cp4.1LG01g18140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g18140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	chaperone protein dnaJ 15-like
Location	Cp4.1LG01: 15052574 .. 15053706 (+)
RNA-Seq Expression	Cp4.1LG01g18140
Synteny	Cp4.1LG01g18140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGGGGATCGGAATTCTCTTAACACTCGAATCTTTCTTTTTCCGGAGGAAAAGGTATCGCCATGAGCTTGCTATGTATCACATTAGATCTTTTTTATTATTATTATTTTTAAAATTTAACATACTGTTTGGTACTTTGGTTGGTAATCTTTGCCCCTATTTTACATTTTTGTTGCTTGTATCTTTTCTGTCCGTGTTTATCATATAACTGGTTGAATATAGTAGGCAGCCTAGAGCACCAGATAAGGCGTTGTTCAATAAAGCTAATGATTTATTCTCAAAACTTTAGAACTAGATCAAGCCCTTTGAATTAGCTGATCATACAAAAATGATTAGGCAGGTTGGTTAGAATGGGTTACTAGTGGAGAATAATTGCCTAGATAGGTCTATTTGATCTAGATGAATGAAGGATTGTGCAGCTTGGAGGAGTTTCCCTTGGAGCCCAAACTGAAAGAGGGAGTTTGGGCACCATTCCATTTCAATGAAAAAGACAATCATATCATAGATATTTATTTAAGTTTCATTGTATGTGGAAAACCAACTTTGTTGGACTATCGCTCCGTGCTTATTTCACTTTTTGAAGCACTTTTTGATTTAACTGGTGGTGATGCAAGCGTGCAGTGAGCGTTGTAGCTCCCTCGAGCATGCTCTTTGTACAACAAAGCAAAGAGCTAGTAAGGGCCGAAATTGAATATCATATGTAGTGTAGAGTCGGATCTGAGGCTCTTTATTAGGATTGGAACAAGCGAGGAAAGAGTGACCACAAGCTCCTCTTAAGCGCTCGACATGCAGTTAGCTCAAAACAGGTTCAGCATGTGGCCGAGCAAAGCGCACCTATTCTGTTTCACTTAGTTTATTTATTATAGTTTCTTTTTATCACTTAACAAAGTTAGTTATGGATATGAGCTTCTTAAACAACGGGATGGCATATACGCTTCATTCACCATCACAAAAGCACCAAATCCTATCGGAGTTGGTGTTATGAGTAATGGAAGTAGTAGTAAATCTACTGGCGATAGTTCAAAGGTTGAGAATCAAGGAGACGATGGGACCTCAGATGAAAAAGAAAGATCTTTCAAAAAGAGATGGTTCAATATTCCTCGAGGGTCAGACAAAAAGCTCGGTTGA

mRNA sequence

ATGGAAAAGGGGATCGGAATTCTCTTAACACTCGAATCTTTCTTTTTCCGGAGGAAAAGTTATGGATATGAGCTTCTTAAACAACGGGATGGCATATACGCTTCATTCACCATCACAAAAGCACCAAATCCTATCGGAGTTGGTGTTATGAGTAATGGAAGTAGTAGTAAATCTACTGGCGATAGTTCAAAGGTTGAGAATCAAGGAGACGATGGGACCTCAGATGAAAAAGAAAGATCTTTCAAAAAGAGATGGTTCAATATTCCTCGAGGGTCAGACAAAAAGCTCGGTTGA

Coding sequence (CDS)

ATGGAAAAGGGGATCGGAATTCTCTTAACACTCGAATCTTTCTTTTTCCGGAGGAAAAGTTATGGATATGAGCTTCTTAAACAACGGGATGGCATATACGCTTCATTCACCATCACAAAAGCACCAAATCCTATCGGAGTTGGTGTTATGAGTAATGGAAGTAGTAGTAAATCTACTGGCGATAGTTCAAAGGTTGAGAATCAAGGAGACGATGGGACCTCAGATGAAAAAGAAAGATCTTTCAAAAAGAGATGGTTCAATATTCCTCGAGGGTCAGACAAAAAGCTCGGTTGA

Protein sequence

MEKGIGILLTLESFFFRRKSYGYELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKKRWFNIPRGSDKKLG

Homology

[Close]

BLAST of Cp4.1LG01g18140 vs. ExPASy Swiss-Prot
Match: Q9ZSY2 (Chaperone protein dnaJ 15 OS=Arabidopsis thaliana OX=3702 GN=ATJ15 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.6e-08
Identity = 36/77 (46.75%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSK--VENQGDDGTSDEKERSF 83
           ELLKQRD I+++F++ K P+      +SNGSSSK+ GD SK   ++ G++G ++ +++S 
Sbjct: 338 ELLKQRDTIHSTFSVVKTPSG---NNLSNGSSSKAQGDESKGDGDSAGEEGGTENRDKS- 397

Query: 84  KKRWFNIP-RGSDKKLG 98
           K++WFN+  +GSDKKLG
Sbjct: 398 KRKWFNLNLKGSDKKLG 410

[Close]

BLAST of Cp4.1LG01g18140 vs. NCBI nr
Match: XP_022959273.1 (chaperone protein dnaJ 15-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 137 bits (346), Expect = 1.19e-36
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK
Sbjct: 322 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 381

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 382 RWFNIPRGSDKKLG 395

[Close]

BLAST of Cp4.1LG01g18140 vs. NCBI nr
Match: XP_022959239.1 (chaperone protein dnaJ 15-like isoform X1 [Cucurbita moschata] >XP_022959249.1 chaperone protein dnaJ 15-like isoform X1 [Cucurbita moschata] >XP_022959258.1 chaperone protein dnaJ 15-like isoform X1 [Cucurbita moschata] >XP_022959265.1 chaperone protein dnaJ 15-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 137 bits (346), Expect = 1.60e-36
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK
Sbjct: 339 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 398

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 399 RWFNIPRGSDKKLG 412

[Close]

BLAST of Cp4.1LG01g18140 vs. NCBI nr
Match: XP_023531817.1 (chaperone protein dnaJ 15-like [Cucurbita pepo subsp. pepo] >XP_023531825.1 chaperone protein dnaJ 15-like [Cucurbita pepo subsp. pepo] >XP_023531832.1 chaperone protein dnaJ 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137 bits (346), Expect = 1.60e-36
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK
Sbjct: 339 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 398

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 399 RWFNIPRGSDKKLG 412

[Close]

BLAST of Cp4.1LG01g18140 vs. NCBI nr
Match: KAG7032524.1 (Chaperone protein dnaJ 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137 bits (346), Expect = 1.60e-36
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK
Sbjct: 339 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 398

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 399 RWFNIPRGSDKKLG 412

[Close]

BLAST of Cp4.1LG01g18140 vs. NCBI nr
Match: KAG6601819.1 (Chaperone protein dnaJ 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137 bits (346), Expect = 2.21e-36
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK
Sbjct: 359 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 418

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 419 RWFNIPRGSDKKLG 432

[Close]

BLAST of Cp4.1LG01g18140 vs. ExPASy TrEMBL
Match: A0A6J1H5H3 (chaperone protein dnaJ 15-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111460282 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 5.75e-37
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK
Sbjct: 322 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 381

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 382 RWFNIPRGSDKKLG 395

[Close]

BLAST of Cp4.1LG01g18140 vs. ExPASy TrEMBL
Match: A0A6J1H7I2 (chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460282 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 7.73e-37
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK
Sbjct: 339 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 398

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 399 RWFNIPRGSDKKLG 412

[Close]

BLAST of Cp4.1LG01g18140 vs. ExPASy TrEMBL
Match: A0A6J1I833 (chaperone protein dnaJ 15-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470492 PE=4 SV=1)

HSP 1 Score: 135 bits (341), Expect = 3.13e-36
Identity = 70/74 (94.59%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSS VENQGDDGTSDEKERSFKK
Sbjct: 322 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSNVENQGDDGTSDEKERSFKK 381

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 382 RWFNIPRGSDKKLG 395

[Close]

BLAST of Cp4.1LG01g18140 vs. ExPASy TrEMBL
Match: A0A6J1I9M3 (chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470492 PE=4 SV=1)

HSP 1 Score: 135 bits (341), Expect = 4.18e-36
Identity = 70/74 (94.59%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKERSFKK 83
           ELLKQRDGI+ASFTITKAPNPIG GV SNGSSSKSTGDSS VENQGDDGTSDEKERSFKK
Sbjct: 339 ELLKQRDGIHASFTITKAPNPIGAGVTSNGSSSKSTGDSSNVENQGDDGTSDEKERSFKK 398

Query: 84  RWFNIPRGSDKKLG 97
           RWFNIPRGSDKKLG
Sbjct: 399 RWFNIPRGSDKKLG 412

[Close]

BLAST of Cp4.1LG01g18140 vs. ExPASy TrEMBL
Match: A0A6J1JUK0 (chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489840 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 1.07e-29
Identity = 59/79 (74.68%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 19  KSYGYELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSKVENQGDDGTSDEKE 78
           K +  ELLKQRDGI+ASFT+TK+ N +G G MSNG+SSKSTGD SKV+NQG+DGTSDEK+
Sbjct: 334 KQFVDELLKQRDGIHASFTVTKSSNHMGAGAMSNGTSSKSTGDDSKVDNQGEDGTSDEKD 393

Query: 79  RSFKKRWFNIPRGSDKKLG 97
           +SFKKRWF +PRGSDKKLG
Sbjct: 394 KSFKKRWFGMPRGSDKKLG 412

[Close]

BLAST of Cp4.1LG01g18140 vs. TAIR 10
Match: AT1G68370.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.6e-09
Identity = 36/77 (46.75%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 24  ELLKQRDGIYASFTITKAPNPIGVGVMSNGSSSKSTGDSSK--VENQGDDGTSDEKERSF 83
           ELLKQRD I+++F++ K P+      +SNGSSSK+ GD SK   ++ G++G ++ +++S 
Sbjct: 338 ELLKQRDTIHSTFSVVKTPSG---NNLSNGSSSKAQGDESKGDGDSAGEEGGTENRDKS- 397

Query: 84  KKRWFNIP-RGSDKKLG 98
           K++WFN+  +GSDKKLG
Sbjct: 398 KRKWFNLNLKGSDKKLG 410

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSY2	3.6e-08	46.75	Chaperone protein dnaJ 15 OS=Arabidopsis thaliana OX=3702 GN=ATJ15 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g18140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959273.1	1.19e-36	95.95	chaperone protein dnaJ 15-like isoform X3 [Cucurbita moschata]	[more]
XP_022959239.1	1.60e-36	95.95	chaperone protein dnaJ 15-like isoform X1 [Cucurbita moschata] >XP_022959249.1 c...	[more]
XP_023531817.1	1.60e-36	95.95	chaperone protein dnaJ 15-like [Cucurbita pepo subsp. pepo] >XP_023531825.1 chap...	[more]
KAG7032524.1	1.60e-36	95.95	Chaperone protein dnaJ 15 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601819.1	2.21e-36	95.95	Chaperone protein dnaJ 15, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG01g18140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5H3	5.75e-37	95.95	chaperone protein dnaJ 15-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1H7I2	7.73e-37	95.95	chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1I833	3.13e-36	94.59	chaperone protein dnaJ 15-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1I9M3	4.18e-36	94.59	chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1JUK0	1.07e-29	74.68	chaperone protein dnaJ 15-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Cp4.1LG01g18140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68370.1	2.6e-09	46.75	Chaperone DnaJ-domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..97
None	No IPR available	PANTHER	PTHR44272:SF6	CHAPERONE PROTEIN DNAJ 15-LIKE	coord: 19..95
None	No IPR available	PANTHER	PTHR44272	DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)	coord: 19..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g18140.1	Cp4.1LG01g18140.1	mRNA