Cp4.1LG01g18070 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g18070
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein GIS3-like
Location	Cp4.1LG01: 15142785 .. 15143456 (+)
RNA-Seq Expression	Cp4.1LG01g18070
Synteny	Cp4.1LG01g18070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTTAGACCATTTCCAAACCAAACCAAACAATAATAACCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATTTTGAAGACGATTCCGGCCGGACTCCATCTGGGTCCTCGGACTCCGGCGGCGGTGGTGTCGGAGGCGGAGGTGGAGGAGGAGGAGGAGGAGGCGCCGCCGCCGCATCCGGTGAGAGGAAATACGAGTGTCAATACTGTTATAGAGAGTTTGCTAACTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAAAAAGAGCGTCAGCAGCTCAAACGCGCTCAATTACAAGCCTCTAGAAACGCCGCTGTTTTAAGAAACCCCATAGTCTCCGCCTTTTCTCCGCCGCTTCACCTCCTCCCTTCTCCCGCCGCCACGTCATCCGCTTCTTGGGTCTATATGCCCCGTGCTCCACCCCAATTCCAAGTCTCCCATGGTAGCGTCTTCACTCCGGCATACGTCGAGGCTCCGCCGCAGCCACCACCACCGTCTGCGGCGGCTTTTTTCTCAATTGGGTCTCGATCAGCTCATGGGATGGTGGACGGCCCGTCGCTTAGCCGATTCTCGAAGGCGGAGGGTGGATCCGGGTTCGACGACGGTCCTGGCTTGGATTTACATCTCAGCCTGGCTCCGGCAGCGCCATGA

mRNA sequence

ATGGCTGCCTTAGACCATTTCCAAACCAAACCAAACAATAATAACCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATTTTGAAGACGATTCCGGCCGGACTCCATCTGGGTCCTCGGACTCCGGCGGCGGTGGTGTCGGAGGCGGAGGTGGAGGAGGAGGAGGAGGAGGCGCCGCCGCCGCATCCGGTGAGAGGAAATACGAGTGTCAATACTGTTATAGAGAGTTTGCTAACTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAAAAAGAGCGTCAGCAGCTCAAACGCGCTCAATTACAAGCCTCTAGAAACGCCGCTGTTTTAAGAAACCCCATAGTCTCCGCCTTTTCTCCGCCGCTTCACCTCCTCCCTTCTCCCGCCGCCACGTCATCCGCTTCTTGGGTCTATATGCCCCGTGCTCCACCCCAATTCCAAGTCTCCCATGGTAGCGTCTTCACTCCGGCATACGTCGAGGCTCCGCCGCAGCCACCACCACCGTCTGCGGCGGCTTTTTTCTCAATTGGGTCTCGATCAGCTCATGGGATGGTGGACGGCCCGTCGCTTAGCCGATTCTCGAAGGCGGAGGGTGGATCCGGGTTCGACGACGGTCCTGGCTTGGATTTACATCTCAGCCTGGCTCCGGCAGCGCCATGA

Coding sequence (CDS)

ATGGCTGCCTTAGACCATTTCCAAACCAAACCAAACAATAATAACCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATTTTGAAGACGATTCCGGCCGGACTCCATCTGGGTCCTCGGACTCCGGCGGCGGTGGTGTCGGAGGCGGAGGTGGAGGAGGAGGAGGAGGAGGCGCCGCCGCCGCATCCGGTGAGAGGAAATACGAGTGTCAATACTGTTATAGAGAGTTTGCTAACTCCCAAGCCCTCGGCGGCCACCAAAATGCCCACAAAAAAGAGCGTCAGCAGCTCAAACGCGCTCAATTACAAGCCTCTAGAAACGCCGCTGTTTTAAGAAACCCCATAGTCTCCGCCTTTTCTCCGCCGCTTCACCTCCTCCCTTCTCCCGCCGCCACGTCATCCGCTTCTTGGGTCTATATGCCCCGTGCTCCACCCCAATTCCAAGTCTCCCATGGTAGCGTCTTCACTCCGGCATACGTCGAGGCTCCGCCGCAGCCACCACCACCGTCTGCGGCGGCTTTTTTCTCAATTGGGTCTCGATCAGCTCATGGGATGGTGGACGGCCCGTCGCTTAGCCGATTCTCGAAGGCGGAGGGTGGATCCGGGTTCGACGACGGTCCTGGCTTGGATTTACATCTCAGCCTGGCTCCGGCAGCGCCATGA

Protein sequence

MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP

Homology

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-39
Identity = 125/244 (51.23%), Postives = 143/244 (58.61%), Query Frame = 0


Query: 12  NNNNPTTRLKLFGFDV--QEDFEDDS------------GRTPSGSSDSGGGGVGGGGGGG 71
           ++   T+RLKLFGF V  +EDF D S            G  P+GSS   GGGV   GGGG
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 72  GGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV---- 131
           GG       GERKYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA     
Sbjct: 67  GG-------GERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSN 126

Query: 132 -------LRNPIVSAFSPPLHLLPSPAATS--SASWVYMPR-APPQFQVSHGSVFTP--- 191
                  LRNPIVSAF+PP HLL S A        W+Y+PR +P Q  VSHG V      
Sbjct: 127 AGSASQFLRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSG 186

Query: 192 -AYVEAPPQPPPPSAAAFFSIGSRSAHGMVDG--PSLSRFSKAEGGSGFDDGPGLDLHLS 222
            A             + F  +G++  H    G  PS++ FS+ E G+ FDDG GLDLHLS
Sbjct: 187 GAGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLS 242

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.8e-17
Identity = 88/229 (38.43%), Postives = 105/229 (45.85%), Query Frame = 0


Query: 17  TTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGGGAAAASGERKYECQYC 76
           T+ LKLFG ++ E        T S  + S     G G G          S  RKYECQYC
Sbjct: 5   TSSLKLFGINLLE--------TTSVQNQSSEPRPGSGSG----------SESRKYECQYC 64

Query: 77  YREFANSQALGGHQNAHKKERQQLKRAQLQASR------NAAVLRNPIVSAFSPPLHLLP 136
            REFANSQALGGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAF+P  HLL 
Sbjct: 65  CREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLS 124

Query: 137 SP---------AATSSASWVYMPRAPPQFQVS--HGSVFTPAYVEAPPQPPPPSAAAFFS 196
            P          ++SS+ W+Y      Q  V   HG                      + 
Sbjct: 125 QPHPPPHMMLSPSSSSSKWLYGEHMSSQNAVGYFHG------------------GRGLYG 184

Query: 197 IGSRSAHGMVDG-----PSLSRF---SKAEGGSGFDDGPGLDLHLSLAP 221
            G  S  G V       P + RF   S    G   ++G GLDLHLSL P
Sbjct: 185 GGMESMAGEVKTHGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-10
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0


Query: 69  RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASR 110
           +++ECQYC +EFANSQALGGHQNAHKKER + KR QLQA R
Sbjct: 58  KRHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARR 98

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.7e-08
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 68  ERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNA 112
           E++++C YC+R F  SQALGGHQNAHK+ERQQ KR  L ++  A
Sbjct: 52  EKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNAAA 95

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-06
Identity = 40/113 (35.40%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 66  SGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP-IVSAFSP 125
           +  R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  + +  +     +P  +  F  
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLN 149

Query: 126 PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVE----APPQPPPPS 174
             H    P+ T+ A   Y            G   TP+Y      APP   PP+
Sbjct: 150 NHHHRHYPSWTTEARSYY----------GGGGHQTPSYYSRNTLAPPSSNPPT 192

[Close]

BLAST of Cp4.1LG01g18070 vs. NCBI nr
Match: XP_023551731.1 (zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429 bits (1103), Expect = 2.76e-151
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60

Query: 61  GAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS 120
           GAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS
Sbjct: 61  GAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS 120

Query: 121 AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI 180
           AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI
Sbjct: 121 AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI 180

Query: 181 GSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
           GSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP
Sbjct: 181 GSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223

[Close]

BLAST of Cp4.1LG01g18070 vs. NCBI nr
Match: XP_022962365.1 (zinc finger protein GIS3-like [Cucurbita moschata] >KAG6601815.1 Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 424 bits (1089), Expect = 4.20e-149
Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60

Query: 61  G---AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120
           G   AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP
Sbjct: 61  GGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120

Query: 121 IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180
           IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF
Sbjct: 121 IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180

Query: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
           FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP
Sbjct: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 226

[Close]

BLAST of Cp4.1LG01g18070 vs. NCBI nr
Match: KAG7016810.1 (Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 423 bits (1087), Expect = 9.10e-149
Identity = 223/228 (97.81%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60

Query: 61  G-----AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLR 120
           G     AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLR
Sbjct: 61  GGGGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLR 120

Query: 121 NPIVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAA 180
           NPIVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAA
Sbjct: 121 NPIVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAA 180

Query: 181 AFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
           AFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP
Sbjct: 181 AFFSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 228

[Close]

BLAST of Cp4.1LG01g18070 vs. NCBI nr
Match: XP_022971807.1 (zinc finger protein GIS3-like [Cucurbita maxima])

HSP 1 Score: 414 bits (1064), Expect = 2.11e-145
Identity = 217/223 (97.31%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGG    
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGA--- 60

Query: 61  GAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS 120
            AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS
Sbjct: 61  -AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS 120

Query: 121 AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI 180
           AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI
Sbjct: 121 AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI 180

Query: 181 GSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
           GSRSAHGMVDGPSLSRFSKAEGGSG DDGPGLDLHLSLAPAAP
Sbjct: 181 GSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 219

[Close]

BLAST of Cp4.1LG01g18070 vs. NCBI nr
Match: XP_038875418.1 (zinc finger protein GIS3-like [Benincasa hispida])

HSP 1 Score: 296 bits (758), Expect = 9.19e-99
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0


Query: 1   MAALD-HFQTKPNNNN--PTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGG 60
           MAAL+ H+Q+K NNNN  P TRLKLFGFDVQED EDDS  TPS SSDSGGG         
Sbjct: 1   MAALENHYQSKQNNNNNNPATRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLTP------ 60

Query: 61  GGGGAAAA----SGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV 120
               A+AA    SG+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV
Sbjct: 61  ----ASAAAPPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV 120

Query: 121 LRNPIVSAFSPPLHLLPSPAA--TSSASW-VYMPRAPPQFQVSHGSVFT-PAYVEAPPQP 180
            RNPIVSAF+PP HLLPS AA  TSS+SW VY+PR PPQFQVSHG VFT  +Y +APP P
Sbjct: 121 FRNPIVSAFAPPPHLLPSAAASVTSSSSWPVYIPRVPPQFQVSHGCVFTHSSYADAPPPP 180

Query: 181 PPPSAAAFFSIGSRSAHGMVDGP-SLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
           PPP     F +GSRS HGMVD P SLSRFSK +GG+GFDDGPGLDLHLSLAPAAP
Sbjct: 181 PPPD----FFMGSRSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 221

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy TrEMBL
Match: A0A6J1HEU6 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111462831 PE=4 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 2.03e-149
Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60

Query: 61  G---AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120
           G   AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP
Sbjct: 61  GGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP 120

Query: 121 IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180
           IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF
Sbjct: 121 IVSAFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180

Query: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
           FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP
Sbjct: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 226

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy TrEMBL
Match: A0A6J1I2Z4 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111470485 PE=4 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 1.02e-145
Identity = 217/223 (97.31%), Postives = 217/223 (97.31%), Query Frame = 0


Query: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGG 60
           MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGG    
Sbjct: 1   MAALDHFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGA--- 60

Query: 61  GAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS 120
            AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS
Sbjct: 61  -AAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIVS 120

Query: 121 AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI 180
           AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI
Sbjct: 121 AFSPPLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAFFSI 180

Query: 181 GSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
           GSRSAHGMVDGPSLSRFSKAEGGSG DDGPGLDLHLSLAPAAP
Sbjct: 181 GSRSAHGMVDGPSLSRFSKAEGGSGIDDGPGLDLHLSLAPAAP 219

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy TrEMBL
Match: A0A6J1FFV2 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111445339 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 1.02e-97
Identity = 165/226 (73.01%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MAALD-HFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGG 60
           MAAL+ H+Q+K  NN PTTRLKLFGFDVQED EDDS  TPS SSDS              
Sbjct: 1   MAALEEHYQSKQTNN-PTTRLKLFGFDVQEDLEDDSTPTPSASSDSA------------- 60

Query: 61  GGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIV 120
             AA +SG+RKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA V RNPIV
Sbjct: 61  --AAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIV 120

Query: 121 SAFSPPLHLLPSPAATSSASW--VYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180
           SAF+PP HLLPS   TSS+SW  VYMP+APPQFQVSHG VFTP      P PPPP    F
Sbjct: 121 SAFAPPPHLLPSAVLTSSSSWPPVYMPQAPPQFQVSHGCVFTP------PPPPPP----F 180

Query: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
           FS GSRSAHG+VDGPSLSRFS  E G GFDDGPGLDLHLSLAP+AP
Sbjct: 181 FSTGSRSAHGIVDGPSLSRFSTVEDGPGFDDGPGLDLHLSLAPSAP 200

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy TrEMBL
Match: A0A0A0KRQ5 (Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucumis sativus OX=3659 GN=Gl-3 PE=2 SV=1)

HSP 1 Score: 290 bits (743), Expect = 6.48e-97
Identity = 165/229 (72.05%), Postives = 182/229 (79.48%), Query Frame = 0


Query: 1   MAALD-HFQTKPNNNNP-TTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGG 60
           MAAL+ H+QTK NNNNP TTRLKLFGFDVQED + D   TP+ SSDSG            
Sbjct: 1   MAALENHYQTKQNNNNPATTRLKLFGFDVQEDLDQDD-STPT-SSDSGA----------- 60

Query: 61  GGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPI 120
              A  +SG+RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV RNPI
Sbjct: 61  ---AVPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPI 120

Query: 121 VSAFSPPLHLLPSPAATSSASW-VYMPRAPPQFQVSHGSVFTPA--YVEAPPQPPPPSAA 180
           V+AF+PP HLLPS A T+S+SW VY+PRAPPQFQVSHG VFTP+  Y      PPPPS  
Sbjct: 121 VAAFAPPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPP 180

Query: 181 AFFSIGSRSAHGMVDGP-SLSRFSKAEGGSGFDDGPGLDLHLSLAPAAP 223
            FF++GSRS+HGMVD P SLSRFSK +GG+ FDDGPGLDLHLSLAPAAP
Sbjct: 181 DFFTMGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 213

[Close]

BLAST of Cp4.1LG01g18070 vs. ExPASy TrEMBL
Match: A0A6J1JUL8 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111489855 PE=4 SV=1)

HSP 1 Score: 289 bits (739), Expect = 1.74e-96
Identity = 163/225 (72.44%), Postives = 174/225 (77.33%), Query Frame = 0


Query: 1   MAALD-HFQTKPNNNNPTTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGG 60
           MAAL+ H+Q+K NNN PTTRLKLFGFDVQED EDDS  TPS SSDSG             
Sbjct: 1   MAALEEHYQSKQNNN-PTTRLKLFGFDVQEDLEDDSTPTPSASSDSG------------- 60

Query: 61  GGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNPIV 120
             AA +SG+RKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA V RNPIV
Sbjct: 61  --AAPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIV 120

Query: 121 SAFSPPLHLLPSPAATSSASW--VYMPRAPPQFQVSHGSVFTPAYVEAPPQPPPPSAAAF 180
           SAF+PP HLLPS   TSS+SW  VYMP+ PPQFQVSHG VFTP      P PPPP    F
Sbjct: 121 SAFAPPPHLLPSAVLTSSSSWPPVYMPQLPPQFQVSHGCVFTP------PPPPPP----F 180

Query: 181 FSIGSRSAHGMVDGPSLSRFSKAEGGSGFDDGPGLDLHLSLAPAA 222
           FS GSRS HG+VDGPSLSRFS  E G GFDDGPGLDLHLSLAP++
Sbjct: 181 FSTGSRSPHGIVDGPSLSRFSTVEDGPGFDDGPGLDLHLSLAPSS 199

[Close]

BLAST of Cp4.1LG01g18070 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-40
Identity = 125/244 (51.23%), Postives = 143/244 (58.61%), Query Frame = 0


Query: 12  NNNNPTTRLKLFGFDV--QEDFEDDS------------GRTPSGSSDSGGGGVGGGGGGG 71
           ++   T+RLKLFGF V  +EDF D S            G  P+GSS   GGGV   GGGG
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGG 66

Query: 72  GGGGAAAASGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV---- 131
           GG       GERKYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA     
Sbjct: 67  GG-------GERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSN 126

Query: 132 -------LRNPIVSAFSPPLHLLPSPAATS--SASWVYMPR-APPQFQVSHGSVFTP--- 191
                  LRNPIVSAF+PP HLL S A        W+Y+PR +P Q  VSHG V      
Sbjct: 127 AGSASQFLRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSG 186

Query: 192 -AYVEAPPQPPPPSAAAFFSIGSRSAHGMVDG--PSLSRFSKAEGGSGFDDGPGLDLHLS 222
            A             + F  +G++  H    G  PS++ FS+ E G+ FDDG GLDLHLS
Sbjct: 187 GAGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLS 242

[Close]

BLAST of Cp4.1LG01g18070 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 89.4 bits (220), Expect = 4.1e-18
Identity = 88/229 (38.43%), Postives = 105/229 (45.85%), Query Frame = 0


Query: 17  TTRLKLFGFDVQEDFEDDSGRTPSGSSDSGGGGVGGGGGGGGGGGAAAASGERKYECQYC 76
           T+ LKLFG ++ E        T S  + S     G G G          S  RKYECQYC
Sbjct: 5   TSSLKLFGINLLE--------TTSVQNQSSEPRPGSGSG----------SESRKYECQYC 64

Query: 77  YREFANSQALGGHQNAHKKERQQLKRAQLQASR------NAAVLRNPIVSAFSPPLHLLP 136
            REFANSQALGGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAF+P  HLL 
Sbjct: 65  CREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLS 124

Query: 137 SP---------AATSSASWVYMPRAPPQFQVS--HGSVFTPAYVEAPPQPPPPSAAAFFS 196
            P          ++SS+ W+Y      Q  V   HG                      + 
Sbjct: 125 QPHPPPHMMLSPSSSSSKWLYGEHMSSQNAVGYFHG------------------GRGLYG 184

Query: 197 IGSRSAHGMVDG-----PSLSRF---SKAEGGSGFDDGPGLDLHLSLAP 221
            G  S  G V       P + RF   S    G   ++G GLDLHLSL P
Sbjct: 185 GGMESMAGEVKTHGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of Cp4.1LG01g18070 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-11
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0


Query: 69  RKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASR 110
           +++ECQYC +EFANSQALGGHQNAHKKER + KR QLQA R
Sbjct: 58  KRHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARR 98

[Close]

BLAST of Cp4.1LG01g18070 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-09
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 68  ERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNA 112
           E++++C YC+R F  SQALGGHQNAHK+ERQQ KR  L ++  A
Sbjct: 52  EKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHSNAAA 95

[Close]

BLAST of Cp4.1LG01g18070 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 )

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07
Identity = 40/113 (35.40%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 66  SGERKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVLRNP-IVSAFSP 125
           +  R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  + +  +     +P  +  F  
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLN 149

Query: 126 PLHLLPSPAATSSASWVYMPRAPPQFQVSHGSVFTPAYVE----APPQPPPPS 174
             H    P+ T+ A   Y            G   TP+Y      APP   PP+
Sbjct: 150 NHHHRHYPSWTTEARSYY----------GGGGHQTPSYYSRNTLAPPSSNPPT 192

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9H1	2.4e-39	51.23	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	5.8e-17	38.43	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q39264	4.0e-10	75.61	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	3.7e-08	59.09	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
P93751	2.7e-06	35.40	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g18070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551731.1	2.76e-151	100.00	zinc finger protein GIS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962365.1	4.20e-149	98.67	zinc finger protein GIS3-like [Cucurbita moschata] >KAG6601815.1 Zinc finger pro...	[more]
KAG7016810.1	9.10e-149	97.81	Zinc finger protein GIS3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022971807.1	2.11e-145	97.31	zinc finger protein GIS3-like [Cucurbita maxima]	[more]
XP_038875418.1	9.19e-99	74.04	zinc finger protein GIS3-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g18070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEU6	2.03e-149	98.67	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111462831 PE=4...	[more]
A0A6J1I2Z4	1.02e-145	97.31	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111470485 PE=4 S...	[more]
A0A6J1FFV2	1.02e-97	73.01	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111445339 PE=4...	[more]
A0A0A0KRQ5	6.48e-97	72.05	Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucu...	[more]
A0A6J1JUL8	1.74e-96	72.44	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111489855 PE=4 S...	[more]

BLAST of Cp4.1LG01g18070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68360.1	1.7e-40	51.23	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	4.1e-18	38.43	zinc finger protein 6	[more]
AT1G10480.1	2.8e-11	75.61	zinc finger protein 5	[more]
AT5G06650.1	2.7e-09	59.09	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G41940.1	1.9e-07	35.40	zinc finger protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 71..96 e-value: 1.4E-5 score: 24.9
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 61..117 e-value: 5.9E-9 score: 37.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..223
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 12..223
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 12..223
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 73..93
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 71..98 score: 11.676262
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 67..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g18070.1	Cp4.1LG01g18070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding