Cp4.1LG01g18050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g18050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Copper-binding periplasmic protein
Location	Cp4.1LG01: 15273792 .. 15274529 (-)
RNA-Seq Expression	Cp4.1LG01g18050
Synteny	Cp4.1LG01g18050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTGAAGTTTGCTCTGAGATTTCCACTCTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTAACTCTTCCGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTATGCAAGATCTCTCCTCTGCGGATCAGCTTTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGTTTCTAAACCTAACGAATCGACTCCTCCAATTCCGACAACTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAACCTCCAAGAGTAGAGGTTTCATACGATCCTTGCATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTTGCAGAAACAGCCTTCGATTTCGAGTACAAAATCGTCGGTATCTTCTTGCTCCAACTCGTATTTCGCAAATTCCTGCTCTCAGAAGACTTCGACGAGGACGAATTTCGGGGCGAACAGTGGAAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

mRNA sequence

ATGGCGATTGAAGTTTGCTCTGAGATTTCCACTCTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTAACTCTTCCGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTATGCAAGATCTCTCCTCTGCGGATCAGCTTTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGTTTCTAAACCTAACGAATCGACTCCTCCAATTCCGACAACTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAACCTCCAAGAGTAGAGGTTTCATACGATCCTTGCATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTTGCAGAAACAGCCTTCGATTTCGAGTACAAAATCGTCGGTATCTTCTTGCTCCAACTCGTATTTCGCAAATTCCTGCTCTCAGAAGACTTCGACGAGGACGAATTTCGGGGCGAACAGTGGAAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

Coding sequence (CDS)

ATGGCGATTGAAGTTTGCTCTGAGATTTCCACTCTAGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGGCCGATTCGTTGCCTTCTTCTTCCGATTGCAACCGCGGTCGCTTGGATTTAACTCTTCCGGAATCCGATTTCGATTTCTGCATTGGCAATCTTCTTATGCAAGATCTCTCCTCTGCGGATCAGCTTTTCTGCAATGGAAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGTTTCTAAACCTAACGAATCGACTCCTCCAATTCCGACAACTTCAGTCTCCTCCGAGAAGAAGAGCCTGAAAGAACTTCTATCCGCGAGTTTCGATGCGGAGGAGAAACCGCAATCCAAATCGTCGTTCTGGCAGTTCAAGCGAAGCAGTAGTCTCAATTGCGAAACCTCCAAGAGTAGAGGTTTCATACGATCCTTGCATTTTCTCTCCAGAAGCAACTCCACTGGTTCGGCTTTGAATTTGCAGAAACAGCCTTCGATTTCGAGTACAAAATCGTCGGTATCTTCTTGCTCCAACTCGTATTTCGCAAATTCCTGCTCTCAGAAGACTTCGACGAGGACGAATTTCGGGGCGAACAGTGGAAATGGAGTTCGAATAATGAGTCCTCTTCTCAACCTCCCTCCGCCATACATTTCCAAAGTAACTGTGAGTTTTTTTGGATTCGGTTCTCTGTTTTGCAATGGAAAGAACAAAAAGAAGAACAAATAA

Protein sequence

MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQDLSSADQLFCNGKILPVEIKKSIVSKPNESTPPIPTTSVSSEKKSLKELLSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK

Homology

[Close]

BLAST of Cp4.1LG01g18050 vs. NCBI nr
Match: XP_023521240.1 (uncharacterized protein LOC111784934 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465 bits (1196), Expect = 9.94e-165
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ
Sbjct: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSIVSKPNESTPPIPTTSVSSEKKSLKELLSASFDAEEKP 120
           DLSSADQLFCNGKILPVEIKKSIVSKPNESTPPIPTTSVSSEKKSLKELLSASFDAEEKP
Sbjct: 61  DLSSADQLFCNGKILPVEIKKSIVSKPNESTPPIPTTSVSSEKKSLKELLSASFDAEEKP 120

Query: 121 QSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQKQPSISSTKSSVSSC 180
           QSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQKQPSISSTKSSVSSC
Sbjct: 121 QSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQKQPSISSTKSSVSSC 180

Query: 181 SNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKN 240
           SNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKN
Sbjct: 181 SNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKN 240

Query: 241 KKKNK 245
           KKKNK
Sbjct: 241 KKKNK 245

[Close]

BLAST of Cp4.1LG01g18050 vs. NCBI nr
Match: XP_022971829.1 (uncharacterized protein LOC111470497 isoform X2 [Cucurbita maxima])

HSP 1 Score: 420 bits (1079), Expect = 8.99e-147
Identity = 229/254 (90.16%), Postives = 238/254 (93.70%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAIEVCSEIS++GISPRISFSHDLNQADSLPSSSDCNRGRLDL+L ESDFDFCIGNLL+Q
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPIPT----TSVSSEKKSLKELLS 120
           DLSSAD+LFCNGKILPVEIKKSI     VSKPN+STPPIP     +SVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQKQPSIS 180
           ASFDAEEKPQSKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGSALNLQKQPSIS
Sbjct: 121 ASFDAEEKPQSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNLQKQPSIS 180

Query: 181 STKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFGF 240
           S KSSVSSCSNSYFANSCSQK STR NFGAN+GNGVRIMSPLLNLPPPYISKVTVSFFGF
Sbjct: 181 SRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIMSPLLNLPPPYISKVTVSFFGF 240

Query: 241 GSLFCNGKNKKKNK 245
           GSLFCNGKNKKKNK
Sbjct: 241 GSLFCNGKNKKKNK 253

[Close]

BLAST of Cp4.1LG01g18050 vs. NCBI nr
Match: XP_022971826.1 (uncharacterized protein LOC111470497 isoform X1 [Cucurbita maxima])

HSP 1 Score: 407 bits (1046), Expect = 2.10e-141
Identity = 229/276 (82.97%), Postives = 238/276 (86.23%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAIEVCSEIS++GISPRISFSHDLNQADSLPSSSDCNRGRLDL+L ESDFDFCIGNLL+Q
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPIPT----TSVSSEKKSLKELLS 120
           DLSSAD+LFCNGKILPVEIKKSI     VSKPN+STPPIP     +SVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN-------- 180
           ASFDAEEKPQSKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGSALN        
Sbjct: 121 ASFDAEEKPQSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQ 180

Query: 181 --------------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRI 240
                         LQKQPSISS KSSVSSCSNSYFANSCSQK STR NFGAN+GNGVRI
Sbjct: 181 SQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRI 240

Query: 241 MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 245
           MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 275

[Close]

BLAST of Cp4.1LG01g18050 vs. NCBI nr
Match: KAG6601812.1 (hypothetical protein SDJN03_07045, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402 bits (1034), Expect = 1.14e-139
Identity = 227/270 (84.07%), Postives = 236/270 (87.41%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAIEV SEIS++GISPRISFSHDLNQADSLPSSSDCNRGRLDL+L ESDFDFCIGNLL+Q
Sbjct: 1   MAIEVSSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPIP----TTSVSSEKKSLKELLS 120
           DLSSAD+LFCNGKILPVEIKKS+     VSKPNESTPPIP    T+SVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSVEPNREVSKPNESTPPIPPDPPTSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN-------- 180
           ASFDAEEKP SKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGSALN        
Sbjct: 121 ASFDAEEKPHSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKHQSQSQ 180

Query: 181 --------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLN 240
                   LQKQPSISS KSSVSSCSNSYFANS SQK STR NFGAN+GNGVRIMSPLLN
Sbjct: 181 SKDSRTPNLQKQPSISSRKSSVSSCSNSYFANSFSQKPSTRRNFGANNGNGVRIMSPLLN 240

Query: 241 LPPPYISKVTVSFFGFGSLFCNGKNKKKNK 245
           LPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 LPPPYISKVTVSFFGFGSLFCNGKNKKKNK 269

[Close]

BLAST of Cp4.1LG01g18050 vs. NCBI nr
Match: XP_022959333.1 (uncharacterized protein LOC111460336 [Cucurbita moschata] >KAG7032519.1 hypothetical protein SDJN02_06568, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399 bits (1025), Expect = 3.55e-138
Identity = 228/278 (82.01%), Postives = 237/278 (85.25%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDF--CIGNLL 60
           MAIEVCSEIS++GISPRISFSHDLNQADSLPSSSDCNRGRLDL+L ESDFDF  CIGNLL
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFDFCIGNLL 60

Query: 61  MQDLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPIP----TTSVSSEKKSLKEL 120
           +QDLSSAD+LFCNGKILPVEIKKS+     VSKPNESTPPIP    T+SVSSEKKSLKEL
Sbjct: 61  LQDLSSADELFCNGKILPVEIKKSVEPNREVSKPNESTPPIPPDPPTSSVSSEKKSLKEL 120

Query: 121 LSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN------ 180
           LSASFDAEEKP SKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGSALN      
Sbjct: 121 LSASFDAEEKPHSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKHQSQ 180

Query: 181 ----------------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGV 240
                           LQKQPSISS KSSVSSCSNSYFANS SQK STR NFGAN+GNGV
Sbjct: 181 SQSQSQSQSKDSRTPNLQKQPSISSRKSSVSSCSNSYFANSFSQKPSTRRNFGANNGNGV 240

Query: 241 RIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 245
           RIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 RIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 277

[Close]

BLAST of Cp4.1LG01g18050 vs. ExPASy TrEMBL
Match: A0A6J1I9N3 (uncharacterized protein LOC111470497 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470497 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 4.35e-147
Identity = 229/254 (90.16%), Postives = 238/254 (93.70%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAIEVCSEIS++GISPRISFSHDLNQADSLPSSSDCNRGRLDL+L ESDFDFCIGNLL+Q
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPIPT----TSVSSEKKSLKELLS 120
           DLSSAD+LFCNGKILPVEIKKSI     VSKPN+STPPIP     +SVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQKQPSIS 180
           ASFDAEEKPQSKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGSALNLQKQPSIS
Sbjct: 121 ASFDAEEKPQSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNLQKQPSIS 180

Query: 181 STKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFGF 240
           S KSSVSSCSNSYFANSCSQK STR NFGAN+GNGVRIMSPLLNLPPPYISKVTVSFFGF
Sbjct: 181 SRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIMSPLLNLPPPYISKVTVSFFGF 240

Query: 241 GSLFCNGKNKKKNK 245
           GSLFCNGKNKKKNK
Sbjct: 241 GSLFCNGKNKKKNK 253

[Close]

BLAST of Cp4.1LG01g18050 vs. ExPASy TrEMBL
Match: A0A6J1I4A0 (uncharacterized protein LOC111470497 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470497 PE=4 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 1.02e-141
Identity = 229/276 (82.97%), Postives = 238/276 (86.23%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAIEVCSEIS++GISPRISFSHDLNQADSLPSSSDCNRGRLDL+L ESDFDFCIGNLL+Q
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPIPT----TSVSSEKKSLKELLS 120
           DLSSAD+LFCNGKILPVEIKKSI     VSKPN+STPPIP     +SVSSEKKSLKELLS
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQSTPPIPPDPPRSSVSSEKKSLKELLS 120

Query: 121 ASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN-------- 180
           ASFDAEEKPQSKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGSALN        
Sbjct: 121 ASFDAEEKPQSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKQQSQSQ 180

Query: 181 --------------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRI 240
                         LQKQPSISS KSSVSSCSNSYFANSCSQK STR NFGAN+GNGVRI
Sbjct: 181 SQSQSQSKDSRTPSLQKQPSISSRKSSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRI 240

Query: 241 MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 245
           MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 MSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 275

[Close]

BLAST of Cp4.1LG01g18050 vs. ExPASy TrEMBL
Match: A0A6J1H5M5 (uncharacterized protein LOC111460336 OS=Cucurbita moschata OX=3662 GN=LOC111460336 PE=4 SV=1)

HSP 1 Score: 399 bits (1025), Expect = 1.72e-138
Identity = 228/278 (82.01%), Postives = 237/278 (85.25%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDF--CIGNLL 60
           MAIEVCSEIS++GISPRISFSHDLNQADSLPSSSDCNRGRLDL+L ESDFDF  CIGNLL
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFDFCIGNLL 60

Query: 61  MQDLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPIP----TTSVSSEKKSLKEL 120
           +QDLSSAD+LFCNGKILPVEIKKS+     VSKPNESTPPIP    T+SVSSEKKSLKEL
Sbjct: 61  LQDLSSADELFCNGKILPVEIKKSVEPNREVSKPNESTPPIPPDPPTSSVSSEKKSLKEL 120

Query: 121 LSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN------ 180
           LSASFDAEEKP SKS FWQFKRSSSLNCE+SKSRG IRSLHFLSRSNSTGSALN      
Sbjct: 121 LSASFDAEEKPHSKS-FWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALNSKHQSQ 180

Query: 181 ----------------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGV 240
                           LQKQPSISS KSSVSSCSNSYFANS SQK STR NFGAN+GNGV
Sbjct: 181 SQSQSQSQSKDSRTPNLQKQPSISSRKSSVSSCSNSYFANSFSQKPSTRRNFGANNGNGV 240

Query: 241 RIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 245
           RIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK
Sbjct: 241 RIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 277

[Close]

BLAST of Cp4.1LG01g18050 vs. ExPASy TrEMBL
Match: A0A6J1FKX8 (uncharacterized protein LOC111445167 OS=Cucurbita moschata OX=3662 GN=LOC111445167 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 4.89e-118
Identity = 207/273 (75.82%), Postives = 219/273 (80.22%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAIEVCSEIST+GISPRISFSHDLNQAD LPSSSDCNR RLDLTL ESDFDFCIGNLL Q
Sbjct: 1   MAIEVCSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSI-----VSKPNESTPPIPT------TSVSSEKKSLKEL 120
           DLSSAD+LF NGKILPVEIKKSI     V KP +S PP P        SVSSEKKSLKEL
Sbjct: 61  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPPPPPVPPDPARNSVSSEKKSLKEL 120

Query: 121 LSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN------ 180
           LSASFDA+EKPQSKS FWQFKRSSSLNCE+SKSR  IRSLHFLSRSNSTGSALN      
Sbjct: 121 LSASFDADEKPQSKS-FWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQST 180

Query: 181 --------LQKQPSISSTK---SSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSP 240
                   LQKQPSISS++   +S+S+ +NSYFAN  SQK S R N G N+GNGVRI SP
Sbjct: 181 SKDPQRPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRI-SP 240

Query: 241 LLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 245
            LNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 241 FLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 271

[Close]

BLAST of Cp4.1LG01g18050 vs. ExPASy TrEMBL
Match: A0A6J1DFL1 (uncharacterized protein LOC111020041 OS=Momordica charantia OX=3673 GN=LOC111020041 PE=4 SV=1)

HSP 1 Score: 339 bits (869), Expect = 6.89e-115
Identity = 202/271 (74.54%), Postives = 216/271 (79.70%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPESDFDFCIGNLLMQ 60
           MAIEVCSEIS++GISPRISFSHDLNQ D LPSS D +R RLDLTL ESDFDFCIGNLL+Q
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQTDLLPSS-DGSRDRLDLTLLESDFDFCIGNLLIQ 60

Query: 61  DLSSADQLFCNGKILPVEIKKSI------VSKPNESTPPIPT----TSVSSEKKSLKELL 120
           DLSSAD+LF NG+I PV+IKKS+      V KPNES P  P      S+SSEKKSLKELL
Sbjct: 61  DLSSADELFSNGRIRPVQIKKSLDANTQLVHKPNESAPIAPPEPSRNSISSEKKSLKELL 120

Query: 121 SASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN------- 180
           SASFDA+EKPQSKS FWQFKRSSSLNCE+SKSR  IRSLHFLSRSNSTGS+LN       
Sbjct: 121 SASFDADEKPQSKS-FWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSSLNPKQQPNS 180

Query: 181 ---------LQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLL 240
                    LQKQPSISS KSS SS  NSYF NS SQK+STR NFG N+GN VRI SPLL
Sbjct: 181 KDSSSQRPNLQKQPSISSRKSSASSFPNSYFTNSSSQKSSTRKNFGPNNGNAVRI-SPLL 240

Query: 241 NLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 245
           NLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 241 NLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 268

[Close]

BLAST of Cp4.1LG01g18050 vs. TAIR 10
Match: AT1G68330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 7.1e-32
Identity = 122/283 (43.11%), Postives = 155/283 (54.77%), Query Frame = 0


Query: 1   MAIEV-CSEISTLGISPRISFSHDLNQADSLPSSSDCNRGRLDLTLPE--SDFDFCIG-N 60
           MAI+V CSE S  GISPRISFS+DL+       S+D    RLD TL +  S+FDFC G +
Sbjct: 1   MAIDVCCSEASGSGISPRISFSYDLD-------STDDGEVRLDSTLLDSGSEFDFCFGSS 60

Query: 61  LLMQDLSSADQLFCNGKILPVEIKK----------------SIVSKPNESTPPIPTTSVS 120
             +Q++S AD+LF  GKILPV+IKK                S+ S  + S+    ++   
Sbjct: 61  CSVQEVSPADELFSEGKILPVQIKKEESLPQTVTFRVPRSASLSSSSSSSSSSSSSSRAP 120

Query: 121 SEKKSLKE-LLSASFDAEEKPQSKSSFWQFKRSSSLNCETSK-SRGFIRSLHFLSRSNST 180
            +K  LKE LL+   D E+KP  +  F QFKRS SLN + S+ S+G IRS HFLSRSNST
Sbjct: 121 EKKMRLKELLLNPESDFEDKP--RGLFLQFKRSISLNYDKSRNSKGLIRSFHFLSRSNST 180

Query: 181 GS---------------ALNLQKQPSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANS 240
            +                 NL K        SS+SS S  ++    S+K   R +FG N 
Sbjct: 181 PNPNLDLLPKETHHPHKTHNLPKHKPPLRRSSSLSSSSVPFY----SKKPLGRNSFG-NG 240

Query: 241 GNGVRIMSPLLNLPPP-YISKVTVSFFGFGSLFCNGKNKKKNK 246
             GVR+ SP+LN PPP +IS V   FF  GSL CNGK   K K
Sbjct: 241 NGGVRV-SPVLNFPPPAFISNVADGFFSIGSL-CNGKTNTKTK 267

[Close]

BLAST of Cp4.1LG01g18050 vs. TAIR 10
Match: AT1G67050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits to 318 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-25
Identity = 106/280 (37.86%), Postives = 150/280 (53.57%), Query Frame = 0


Query: 1   MAIEVCSEISTLGISPRISFSHDLNQADSLP------SSSDCNRGRLDLTLPESDFDFCI 60
           MA+++ SE S +  SPRISFS D  Q+D++P       SS+     L+ ++   DFDFCI
Sbjct: 1   MAVDLLSENSNM--SPRISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSI---DFDFCI 60

Query: 61  ------GNLLMQDLSSADQLFCNGKILPVEIKKSIVSKPNESTP-PIPTTSVSSEKKSLK 120
                 G    Q   SAD+LF NGKILP EIKK    +P +  P P P  S    +K  K
Sbjct: 61  PGGVNSGESFDQGSWSADELFSNGKILPTEIKKK--PEPGKKEPEPKPVKSKPDSRKQRK 120

Query: 121 ELLSAS------FDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSA 180
           +              EEK  +K SFW FKRSSSLNC ++  R  +  L  L+RSNSTGS 
Sbjct: 121 QPNEEQQEDDVIITTEEKTNTK-SFWGFKRSSSLNCGSTYGRS-LCPLPLLNRSNSTGST 180

Query: 181 LNLQKQ---------------PSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNG 240
            + QKQ                S+SS+ S+ SS SN+ F+    +K+    ++G++ G G
Sbjct: 181 SSKQKQSSSRKHNEHVKLQQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGGGG 240

Query: 241 VRIMSPLLNLPPPYISKVTVSFFGFGSLFC-NGKNKKKNK 246
           +R+ SP++N+ P      + + FGFGS+F  NG++K K +
Sbjct: 241 IRV-SPVINVVP------SGNLFGFGSMFSGNGRDKNKKR 264

[Close]

BLAST of Cp4.1LG01g18050 vs. TAIR 10
Match: AT1G48780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14
Identity = 89/255 (34.90%), Postives = 115/255 (45.10%), Query Frame = 0


Query: 17  RISFSHDLNQADSLP-----SSSDCNRGRLDLTLPESDFDFCIGNLL-MQDLSSADQLFC 76
           RISFS DL Q+D  P      S    R    L    SDF+F I N     D S AD++F 
Sbjct: 9   RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDSSPADEIFA 68

Query: 77  NGKILPVEIK-----------------KSIVSKPNESTPPIPTTSVSSEKKSLKELLSAS 136
           +G ILP  +                   S +S    S  P+PT    SEK++      A+
Sbjct: 69  DGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPLSPQPLPTK--HSEKETNGRASGAN 128

Query: 137 FDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALNLQK---QPSI 196
            D+E +  SK SFW FKRSSSLNC+  KS   I S   L+RSNSTGS  N ++   +   
Sbjct: 129 SDSEAEKSSK-SFWSFKRSSSLNCDIKKS--LICSFPRLTRSNSTGSVTNSKRAMLRDVN 188

Query: 197 SSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVRIMSPLLNLPPPYISKVTVSFFG 246
           +   SS SSC N+Y      Q    +       G G   + P+LN P         S FG
Sbjct: 189 NHRPSSRSSCCNAY------QFRPQKHTGKKGEGGGSFSVIPVLNGP---------STFG 243

[Close]

BLAST of Cp4.1LG01g18050 vs. TAIR 10
Match: AT3G18300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 7.2e-08
Identity = 85/275 (30.91%), Postives = 111/275 (40.36%), Query Frame = 0


Query: 17  RISFSHDLNQADSLPSSSDCNRG--RLDLTL---PESDFDFCI-GNLLMQDLSSADQLFC 76
           R SF+ DL Q+D          G  R D TL     SDF+F I  N    D S AD++F 
Sbjct: 10  RFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSSNSDFEFHISSNFDPGDSSPADEIFA 69

Query: 77  NGKILPV-------------EIKK----SIVSKPNEST--PPIPTT--------SVSSEK 136
           +G ILPV              + K     IVS P  S+  PP+P          SV   +
Sbjct: 70  DGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEHSRKYSVKETR 129

Query: 137 KSLKELLSASFDAEEKPQSKSSFWQFKRSSSLNCETSKSRGFIRSLHFLSRSNSTGSALN 196
            SL    S +    E  +S  SFW FKRSSSLNC+  KS   I S   L+RSNSTGS   
Sbjct: 130 GSLNGRGSGANSDSEAEKSSKSFWSFKRSSSLNCDIKKS--LICSFPRLTRSNSTGSVAI 189

Query: 197 LQKQ---------------PSISSTKSSVSSCSNSYFANSCSQKTSTRTNFGANSGNGVR 244
            +++               P      SS     +S+  +S   +             G  
Sbjct: 190 SKREMLRDINKHSSQRHGVPRPGVNPSSHMRPPSSFCCSSYQFRPQKHAGKNGGGRGGSF 249

[Close]

BLAST of Cp4.1LG01g18050 vs. TAIR 10
Match: AT5G62770.1 (Protein of unknown function (DUF1645) )

HSP 1 Score: 42.7 bits (99), Expect = 4.8e-04
Identity = 39/126 (30.95%), Postives = 59/126 (46.83%), Query Frame = 0


Query: 22  HDLNQADSLPSSSDCNRGRLDLTLPESDFDF-CIGNLLMQDLSSADQLFCNGKILPVEIK 81
           HD  Q+DS P   D N         +SDF F C  N   Q L++AD++FCNG+I P+   
Sbjct: 39  HDQTQSDSSPHRDDDN---------DSDFAFDCPSNTCSQPLATADEIFCNGQIRPLNPY 98

Query: 82  KSIVSKPNESTPPIPTTSVSSEKKSLKELLS--------ASFDAEEK----PQSKSSFWQ 135
                  ++ T  I T      + +L++L+S        +S +AEE     P      W+
Sbjct: 99  GGNAPVESQPTSKITTLPPRRRRPALRKLMSEDRDPASNSSSEAEEDLTGVPPETYCVWK 155

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18050 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g18050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521240.1	9.94e-165	100.00	uncharacterized protein LOC111784934 [Cucurbita pepo subsp. pepo]	[more]
XP_022971829.1	8.99e-147	90.16	uncharacterized protein LOC111470497 isoform X2 [Cucurbita maxima]	[more]
XP_022971826.1	2.10e-141	82.97	uncharacterized protein LOC111470497 isoform X1 [Cucurbita maxima]	[more]
KAG6601812.1	1.14e-139	84.07	hypothetical protein SDJN03_07045, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022959333.1	3.55e-138	82.01	uncharacterized protein LOC111460336 [Cucurbita moschata] >KAG7032519.1 hypothet...	[more]

BLAST of Cp4.1LG01g18050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I9N3	4.35e-147	90.16	uncharacterized protein LOC111470497 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I4A0	1.02e-141	82.97	uncharacterized protein LOC111470497 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H5M5	1.72e-138	82.01	uncharacterized protein LOC111460336 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1FKX8	4.89e-118	75.82	uncharacterized protein LOC111445167 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1DFL1	6.89e-115	74.54	uncharacterized protein LOC111020041 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Cp4.1LG01g18050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68330.1	7.1e-32	43.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G67050.1	1.3e-25	37.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G48780.1	1.8e-14	34.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G18300.1	7.2e-08	30.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G62770.1	4.8e-04	30.95	Protein of unknown function (DUF1645)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31722:SF33	COPPER-BINDING PERIPLASMIC PROTEIN	coord: 1..244
None	No IPR available	PANTHER	PTHR31722	OS06G0675200 PROTEIN	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g18050.1	Cp4.1LG01g18050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds