Cp4.1LG01g17960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Regulator of Vps4 activity in the MVB pathway protein
Location	Cp4.1LG01: 14622463 .. 14627189 (+)
RNA-Seq Expression	Cp4.1LG01g17960
Synteny	Cp4.1LG01g17960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGTATAATAAGTCAAGAATAGAATGATCTAAAGATGGTACCAGAAAAGTCGTGTGGTATAAAAGATGACACGAGAATAAAAAAAAAAAAGAGTACAAAAATTGTGAATAGGCGAAAGTCCAAATGGCACTAGACCATTTTGTTGTGTTCGATGAAACTCCTTTAGTGTTGTCTTTCTTTTCAAATCTTGCTTTAGGTTTGAAGTTGAGCTAATTTATTGGATTAGTCTCGATCAAGCTAATTCTTGAGTGAGTTATCTTGGGATCCAAAAGTGATCCTCATAAATTCAAAATTTGTTTGAATTCATCCTTCTAAATAAATTTTTGGTTGGAATCATTCATTAAATTAGTCTTAGTTGTGAAAGTCTACGGGTCTTAGAAGGATCTCTAACTTTGTAAATCTAACATGGTTATACTTATCATTCTTACCGCTTCCATCTCCAAATTTATTGTTTTTCATTGCATTTGTTTGTGTTTCTCTTTATCCATGGTTAATGTTGCAACATAGAAAAATTTCTAGCTAGTTCTGTATATCATTCTCATCCCAGCTACCCTTCTAAAACCTAAATATGCATATATTAATCATCTAAGGCAACTAGTTAGCACGTTATTTTAAATGTTTTTCATTGTATTAGAAAAGAGGATGAGATGTTATAAATTCTATATGTATCTATGAGATCGAGTATGGAATTCTTTTTACTCACTTTAAATTGAATATCCGTTTCCTTCCCTTTCCTGCCCTTTCCTGCTAGGATTGGAAATTCTGTATTTTACATATCCATACGATTGAATCCTTGAGTTTCCAAAATAGTGTAAAAAGAGGTTCTTCGAATCATTACTATTTGACTCGGACCTGTTCTAAAGAAATTGTTTGTTGACACCGACAAAGGTAAGGAAAACCTCTGAAATTATTGAGTTATCCACCTATATATTATATTAATAACTAAAATTCATAAAATTTGAATTGTTTTTAATTTTATTAATGANCACTTTAGGTCTCTCTTTCAATTAAATTGAACTTCTTAACATTATTACGAGCGAGTAAGGGGACCTTATGGATCTACCGATTATAAGATATCAAATTAATTAAATAAACTCTTTACTTAATCAATTTTCATTAATTAACCATAGGTCATCTAGAGTGGCACTCTTATGCACTGCAGGATAAGTTATATTCATTGATGTAATCATTAGAAGCAAGTTAATCATTCACGAGTTGTTCATAATTACAGTAGGGTCAAAAGATTGTTTTATATCTTTCACCTTAAATACTAATTATTCTCTAATGAACAATTTGTTTATGATCCAATCATAAATCAAGTTTTTCTTGGGCCAATGAAAAGCTGGAGCTCCATTGTTGAAGTCCCGAAATGAGTACTTAAATAACAATTCATCTATCTTTTATATATGGAAAGAAGTGAATTTCATCTGATGATACGACTGTTTTCATATACATTGTATTCATTATTTTTTATAGTGTTTATTGGGTTGGAAGGGTACAGGAGTTGGCTCTTGGGTCTTCTCTTTATTATTTTCTATTTCTCTTTTCCTTTTATATATATATATATATATATATATCTTTTCTGTTTCTTTATTTTATTTAATGTTCACATTAGCATTTCTTAATTTTATTTAACGTTCACATTAGGCAAAGTCAACGTGGGTTTGTATAGATCATATTAGTCTTCTTCTATCATAGGGTGCAGAGGTTGTTAGTTTGAGATCCAAATGAGACTTAGAAGGTAAGGATGAGAAAACTGAGAAGAGTCTTTAAACCTCTCCTGGGAAGAAGCAGGTCCTCTAGTTTCAGACGTTTAGTTCAAAACGCTTTGGAGCACCTCGAAACCCTAAAGAAGCTTCGGCATGGCCGGTACGTCGAAGATCGAAAGGACGCTGCTCGTCTCCTTCATGAAGGCCTTCCCAAACTAGCCCTCTCTCGGGTACGTCTCTCATCCCCTTTTCGATTAACTTTCAGATCATTCGACATAAATTCTGGATGATGTGCGCAGTGCGAGCAAATGATTCGACACCAAAATCTAATGGATGCTTATGGCATGATGGAAGGGTATCTGAATCTGTTGAGGGAAAGATTGTACCTCCTTGCACCTGGAAGGTTTGCTACTTTACCAATGAATTTTCAGAATTAAATTCCCATTTTTCCAAAATAAAAATTTGAGAATAGTATTAATGTTTACATAGAGAGTGCCCTAAAGAATTGGAGGAGGCAGTGTCGAGTGTGGTATTTGCAGCTTCAAGATGTGAGGACTTTCCAGAGCTTGAAGAGATTAAATCGGTATTGAGTTCTAGATTTGGCAGAGAGTTTGCTGCTCGTGCTGTTGAATTACGCATCAATAATACTGTAAATCACTCCGTAAGTCTCACTTAATAACACTTTCTTGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTATGCATTTTTTTTTATTAGTAAACATAATACACTATTAAAAATAATATTATATCATTTTTTACATTTAATTCTTTTATTTTAAAATTTTAGACACACACATATAAATACAAAATTTTGTCTTTTCAATAAAGAAATAAAAGTCAAACCTCATTTTTTTTTTCTATTTTTAAAATAAAAATATAAAAAAATAATATATGGAAGCACATAGCTCCTACAAGCTGTCTCAGGTTTAAGTCTTCGCTCCATAAATTTTATTGTTCTATTATTTCATTAAAAAATTTAATGAATTATATCGGATCAACAAACAGTGAAAATGAGAGGTTGACAGAGTTAGTTAAGTTGGGGACGAAAATACAAGCTAGTCAAACCCTCTACTTTTATATTAGATTTGGTTTAGTCGTTGAGTTATTTTTTTATATTTATTTATAAAAGTTTAGGGTGGATCTCGAAAGATATGAAAGATCTTCCTCCAAGTCGTACATACGACTTTCATCGACTACGGCTTTCCACATAATTCTATATGTATCTATGAGATCGAGTATGGAATTCTTTTTACTCACTTTAAATTGAATATCCGTTTCCTTCCCTTTCCTGCCCTTTCCTGCTAGGATTGGAAATTCTGTATTTTACATATCCATACGATTGAATCCTTGAGTTTCCAAAATAGTGTAAAAAGAGGTTCTTCGAATCATTACTATTTGACTCGGACCTGTTCTAAAGAAATTGTTTGTTGACACCGACAAAGGTAAGGAAAACCTCTGAAATTATTGAGTTATCCACCTATATATTATATTAATAACTAAAATTCATAAAATTTGAATTGTTTTTAATTTTATTAATGAGAGAGTTTGGATGGGTATGTTTTTGTTGGTGATTTAAATATGGGTGAATAGGATATTATAATTAATTAAGTTATGTTATGTTTTAATACTTTGGGTTGCAATTTGGTAGATAATGCTAAAATTGTCCACAAGGAAGCCAAATTTGGAGAGTAAAATGAATCTTCTGAGAGTCATTGCTTCTGAGAATGGCTTCACTCTGCAACTCAACGACAAGGTATGTCACTCTCCAGGGGTAAATAAGGAATACAAAACATTATTAATCTATAAATTTAAGCTTATAATTTTTAAAGCTCATCAATCATATATGATATTTATTTTTATTATTTTCAAATATAATTTAATCTCTCATCTTTATATCAATTTTTTTTTAATCTTATTAGAGAAATTTCAAATTTATTCATATAATAAAATATAAAATTTTGGTAGAACTTAGAGAATTTTATATTACTAGCTACCTTTTCCACTAATTATATAGGGGTAATTTGGATATTCTCTAATAGGATTCATGTGTCTAAAAATAATGTACCTACACCTACACCTATAAGTGGCCCTTCAACACCCTCCTTAAAATCGAATTTTTTAACTGTGGAATCTGGTTGCTTCTTATTAAGAATTTAAAGCCTTTTTTAACCAAATTGTTTGGGACGAGCATGTTGGTAGTGCCAAAAATCAGCTTTTGTAGTTATAAGTGCACAATAGACTGCTTCTTTGAAGACCGCAGATAGCTCCTAAACTCATCATGATAACACTTCCCGAATTTATATCACCTACATAATCGTTATCTGTATAATCAACTGTCTTTGGATCACTTTCTTTCTTTCTAGAATACTCCAAATTTTAAAGTTCCTCTCACATATTGAAGTATTCTTCTTGTTTCGTTGAGATGCTTCTTTGTTGGATGCTCCATGTACCAACTTATCATGCTAACAACATAAATGATGTCTAGTCTTGTTGAGGTTAAGTACATCAAACATCCCACAATCTACTTAAAGCATTTATTATCAACCTCTGGCCCTTCAACGTCCTTGTGTAGCTTCAAACCCAATTCTGATGGAATTCCAAGTGTGCGCTCATCCGTTTTAAATCTTCTTTTGACATATCAAGATGCCATTAACCGTCTGAGTAACTTCTACTCCAAAAAAAAAATTCATCGTACCAAGATTTGTCATTTCAAATTCCTAGTTTTGTTGACAAGGCAAACAATGAAAATGTTGACCTTTCTTTCCTTTTTTTTTTCTGTTTTTTTTNTATTTGCAGCTTCAAGATGTGAGGACTTTCCAGAGCTTGAAGAGATTAAATCGGTATTGAGTTCTAGATTTGGCAGAGAGTTTGCTGCTCGTGCTGTTGAATTACGCATCAATAATACTGTAAATCACTCCGTAAGTCTCACTTAA

mRNA sequence

ATGCTGGTAAGGATGAGAAAACTGAGAAGAGTCTTTAAACCTCTCCTGGGAAGAAGCAGGTCCTCTAGTTTCAGACGTTTAGTTCAAAACGCTTTGGAGCACCTCGAAACCCTAAAGAAGCTTCGGCATGGCCGGTACGTCGAAGATCGAAAGGACGCTGCTCGTCTCCTTCATGAAGGCCTTCCCAAACTAGCCCTCTCTCGGTGCGAGCAAATGATTCGACACCAAAATCTAATGGATGCTTATGGCATGATGGAAGGGTATCTGAATCTGTTGAGGGAAAGATTGTACCTCCTTGCACCTGGAAGAGAGTGCCCTAAAGAATTGGAGGAGGCAGTGTCGAGTGTGGTATTTGCAGCTTCAAGATGTGAGGACTTTCCAGAGCTTGAAGAGATTAAATCGGTATTGAGTTCTAGATTTGGCAGAGAGTTTGCTGCTCGTGCTGTTGAATTACGCATCAATAATACTGTAAATCACTCCATAATGCTAAAATTGTCCACAAGGAAGCCAAATTTGGAGAGTAAAATGAATCTTCTGAGAGTCATTGCTTCTGAGAATGGCTTCACTCTGCAACTCAACGACAAGGACTTTCCAGAGCTTGAAGAGATTAAATCGGTATTGAGTTCTAGATTTGGCAGAGAGTTTGCTGCTCGTGCTGTTGAATTACGCATCAATAATACTGTAAATCACTCCGTAAGTCTCACTTAA

Coding sequence (CDS)

ATGCTGGTAAGGATGAGAAAACTGAGAAGAGTCTTTAAACCTCTCCTGGGAAGAAGCAGGTCCTCTAGTTTCAGACGTTTAGTTCAAAACGCTTTGGAGCACCTCGAAACCCTAAAGAAGCTTCGGCATGGCCGGTACGTCGAAGATCGAAAGGACGCTGCTCGTCTCCTTCATGAAGGCCTTCCCAAACTAGCCCTCTCTCGGTGCGAGCAAATGATTCGACACCAAAATCTAATGGATGCTTATGGCATGATGGAAGGGTATCTGAATCTGTTGAGGGAAAGATTGTACCTCCTTGCACCTGGAAGAGAGTGCCCTAAAGAATTGGAGGAGGCAGTGTCGAGTGTGGTATTTGCAGCTTCAAGATGTGAGGACTTTCCAGAGCTTGAAGAGATTAAATCGGTATTGAGTTCTAGATTTGGCAGAGAGTTTGCTGCTCGTGCTGTTGAATTACGCATCAATAATACTGTAAATCACTCCATAATGCTAAAATTGTCCACAAGGAAGCCAAATTTGGAGAGTAAAATGAATCTTCTGAGAGTCATTGCTTCTGAGAATGGCTTCACTCTGCAACTCAACGACAAGGACTTTCCAGAGCTTGAAGAGATTAAATCGGTATTGAGTTCTAGATTTGGCAGAGAGTTTGCTGCTCGTGCTGTTGAATTACGCATCAATAATACTGTAAATCACTCCGTAAGTCTCACTTAA

Protein sequence

MLVRMRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCEDFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASENGFTLQLNDKDFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSVSLT

Homology

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BLAST of Cp4.1LG01g17960 vs. ExPASy Swiss-Prot
Match: Q54I39 (IST1-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289029 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-08
Identity = 45/168 (26.79%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 31  ALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMIRHQNLMDAYGMMEGYLN 90
           A+  ++ LK  +     +++++ A LL +   + A  R E +IR + L++ + ++E    
Sbjct: 20  AVSRIQILKNKKANIVRDEKRNVAELLRKKNEESARIRVETIIRDEYLIECFQIIEVLCE 79

Query: 91  LLRERLYLLAPGRECPKELEEAVSSVVFAASRCEDFPELEEIKSVLSSRFGREFAARAVE 150
           LL  R+ L+    E P E++E++ ++V+++ R +  PELE+IK+ L +++G+     A  
Sbjct: 80  LLHARINLINATTEMPLEMKESIFTLVYSSQRIQ-IPELEQIKNQLKAKYGKGLENEA-N 139

Query: 151 LRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASENGFTLQLNDKDFP 199
              +  VN  I+ KLS   P+       L  IA +  F +     D+P
Sbjct: 140 CHCSTHVNPKIVHKLSYATPDPSIIFQTLSEIAEK--FNVDWCGSDYP 183

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy Swiss-Prot
Match: Q3ZBV1 (IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 26  RLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMIRHQNLMDAYGMM 85
           RLV N L+ LE   K +     + RK+ A  L  G  + A  R E +IR   L++A  ++
Sbjct: 16  RLVINRLKLLE---KKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEIL 75

Query: 86  EGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE-DFPELEEIKSVLSSRFGREF 145
           E Y +LL  R  L+   +E    L E+VS++++AA R + +  EL+ +   L +++ +E+
Sbjct: 76  ELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEY 135

Query: 146 AARAVELRINNTVNHSIMLKLSTRKP 171
                  +I  TVN  +M KLS   P
Sbjct: 136 GKLCRTNQI-GTVNDRLMHKLSVEAP 157

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy Swiss-Prot
Match: P53990 (IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 26  RLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMIRHQNLMDAYGMM 85
           RLV N L+ LE   K +     + RK+ A  L  G  + A  R E +IR   L++A  ++
Sbjct: 16  RLVINRLKLLE---KKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEIL 75

Query: 86  EGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE-DFPELEEIKSVLSSRFGREF 145
           E Y +LL  R  L+   +E    L E+VS++++AA R + +  EL+ +   L +++ +E+
Sbjct: 76  ELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEY 135

Query: 146 AARAVELRINNTVNHSIMLKLSTRKP 171
                  +I  TVN  +M KLS   P
Sbjct: 136 GKLCRTNQI-GTVNDRLMHKLSVEAP 157

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy Swiss-Prot
Match: Q9CX00 (IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 26  RLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMIRHQNLMDAYGMM 85
           RLV N L+ LE   K +     + RK+ A  L  G  + A  R E +IR   L++A  ++
Sbjct: 16  RLVINRLKLLE---KKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEIL 75

Query: 86  EGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE-DFPELEEIKSVLSSRFGREF 145
           E Y +LL  R  L+   +E    L E+VS++++AA R + +  EL+ +   L +++ +E+
Sbjct: 76  ELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEY 135

Query: 146 AARAVELRINNTVNHSIMLKLSTRKP 171
                  +I  TVN  +M KLS   P
Sbjct: 136 GKLCRTNQI-GTVNDRLMHKLSVEAP 157

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy Swiss-Prot
Match: Q568Z6 (IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 26  RLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMIRHQNLMDAYGMM 85
           RLV N L+ LE   K +     + RK+ A  L  G  + A  R E +IR   L++A  ++
Sbjct: 16  RLVINRLKLLE---KKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEIL 75

Query: 86  EGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE-DFPELEEIKSVLSSRFGREF 145
           E Y +LL  R  L+   +E    L E+VS++++AA R + +  EL+ +   L +++ +E+
Sbjct: 76  ELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEY 135

Query: 146 AARAVELRINNTVNHSIMLKLSTRKP 171
                  +I  TVN  +M KLS   P
Sbjct: 136 GKLCRTNQI-GTVNDRLMHKLSVEAP 157

[Close]

BLAST of Cp4.1LG01g17960 vs. NCBI nr
Match: XP_023538969.1 (uncharacterized protein LOC111799739 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369 bits (946), Expect = 3.65e-127
Identity = 192/194 (98.97%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 5   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 64
           MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL
Sbjct: 1   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 60

Query: 65  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 124
           ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE
Sbjct: 61  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 120

Query: 125 DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIAS 184
           DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIAS
Sbjct: 121 DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIAS 180

Query: 185 ENGFTLQLNDKDFP 198
           ENGFTLQLNDK  P
Sbjct: 181 ENGFTLQLNDKGEP 194

[Close]

BLAST of Cp4.1LG01g17960 vs. NCBI nr
Match: XP_022963468.1 (uncharacterized protein LOC111463790 [Cucurbita moschata])

HSP 1 Score: 362 bits (929), Expect = 1.42e-124
Identity = 189/194 (97.42%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 5   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 64
           MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL
Sbjct: 1   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 60

Query: 65  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 124
           ALSRCEQM RHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE
Sbjct: 61  ALSRCEQMFRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 120

Query: 125 DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIAS 184
           DFPELEEIKSVLSSRFG EFAARAVELR NNTVNHSIMLKLSTRKPNLESKMNLLRVIAS
Sbjct: 121 DFPELEEIKSVLSSRFGTEFAARAVELRNNNTVNHSIMLKLSTRKPNLESKMNLLRVIAS 180

Query: 185 ENGFTLQLNDKDFP 198
           ENGFTLQLNDK  P
Sbjct: 181 ENGFTLQLNDKGEP 194

[Close]

BLAST of Cp4.1LG01g17960 vs. NCBI nr
Match: XP_022971780.1 (uncharacterized protein LOC111470458 [Cucurbita maxima])

HSP 1 Score: 350 bits (897), Expect = 1.10e-119
Identity = 184/195 (94.36%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 5   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 64
           MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKL HGRYVEDRKD ARLLHEGLPKL
Sbjct: 1   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLHHGRYVEDRKDTARLLHEGLPKL 60

Query: 65  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLL-APGRECPKELEEAVSSVVFAASRC 124
           ALSRCEQMIRHQNLMDAYGMMEGYLNLLRER++LL APGRECPKELEEAVSSVVFAASRC
Sbjct: 61  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERMHLLLAPGRECPKELEEAVSSVVFAASRC 120

Query: 125 EDFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIA 184
           EDFPEL+EIKSVLSSRFG EFAARAVELR NNTVNHSIMLKLSTRKPNLESKM+LLRVIA
Sbjct: 121 EDFPELQEIKSVLSSRFGTEFAARAVELRNNNTVNHSIMLKLSTRKPNLESKMHLLRVIA 180

Query: 185 SENGFTLQLNDKDFP 198
           SENGFTLQLNDK  P
Sbjct: 181 SENGFTLQLNDKGEP 195

[Close]

BLAST of Cp4.1LG01g17960 vs. NCBI nr
Match: XP_023522757.1 (uncharacterized protein LOC111786761, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301 bits (771), Expect = 1.63e-101
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 5   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 64
           MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL
Sbjct: 1   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 60

Query: 65  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 124
           ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE
Sbjct: 61  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 120

Query: 125 DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHS 160
           DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHS
Sbjct: 121 DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHS 156

[Close]

BLAST of Cp4.1LG01g17960 vs. NCBI nr
Match: KAG6601796.1 (IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032510.1 IST1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 296 bits (759), Expect = 1.26e-99
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 5   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 64
           MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL
Sbjct: 1   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 60

Query: 65  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 124
           ALSRCEQM RHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE
Sbjct: 61  ALSRCEQMFRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 120

Query: 125 DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIML 163
           DFPELEEIKSVLSSRFG EFAARAVELR NNTVNHS+ L
Sbjct: 121 DFPELEEIKSVLSSRFGTEFAARAVELRNNNTVNHSVCL 159

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy TrEMBL
Match: A0A6J1HHW4 (uncharacterized protein LOC111463790 OS=Cucurbita moschata OX=3662 GN=LOC111463790 PE=3 SV=1)

HSP 1 Score: 362 bits (929), Expect = 6.86e-125
Identity = 189/194 (97.42%), Postives = 189/194 (97.42%), Query Frame = 0


Query: 5   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 64
           MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL
Sbjct: 1   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 60

Query: 65  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 124
           ALSRCEQM RHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE
Sbjct: 61  ALSRCEQMFRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 120

Query: 125 DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIAS 184
           DFPELEEIKSVLSSRFG EFAARAVELR NNTVNHSIMLKLSTRKPNLESKMNLLRVIAS
Sbjct: 121 DFPELEEIKSVLSSRFGTEFAARAVELRNNNTVNHSIMLKLSTRKPNLESKMNLLRVIAS 180

Query: 185 ENGFTLQLNDKDFP 198
           ENGFTLQLNDK  P
Sbjct: 181 ENGFTLQLNDKGEP 194

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy TrEMBL
Match: A0A6J1I6P0 (uncharacterized protein LOC111470458 OS=Cucurbita maxima OX=3661 GN=LOC111470458 PE=3 SV=1)

HSP 1 Score: 350 bits (897), Expect = 5.31e-120
Identity = 184/195 (94.36%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 5   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 64
           MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKL HGRYVEDRKD ARLLHEGLPKL
Sbjct: 1   MRKLRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLHHGRYVEDRKDTARLLHEGLPKL 60

Query: 65  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLL-APGRECPKELEEAVSSVVFAASRC 124
           ALSRCEQMIRHQNLMDAYGMMEGYLNLLRER++LL APGRECPKELEEAVSSVVFAASRC
Sbjct: 61  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERMHLLLAPGRECPKELEEAVSSVVFAASRC 120

Query: 125 EDFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIA 184
           EDFPEL+EIKSVLSSRFG EFAARAVELR NNTVNHSIMLKLSTRKPNLESKM+LLRVIA
Sbjct: 121 EDFPELQEIKSVLSSRFGTEFAARAVELRNNNTVNHSIMLKLSTRKPNLESKMHLLRVIA 180

Query: 185 SENGFTLQLNDKDFP 198
           SENGFTLQLNDK  P
Sbjct: 181 SENGFTLQLNDKGEP 195

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy TrEMBL
Match: A0A6J1CEI4 (uncharacterized protein LOC111010490 OS=Momordica charantia OX=3673 GN=LOC111010490 PE=3 SV=1)

HSP 1 Score: 237 bits (604), Expect = 3.72e-75
Identity = 128/195 (65.64%), Postives = 154/195 (78.97%), Query Frame = 0


Query: 8   LRRVFKPLLGRS-RSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHE-GLPKLA 67
           +RR+  PLLGR+ +SS+FRRL+ +A   L++L   R  RY +DR D  RLL + GL  LA
Sbjct: 1   MRRILNPLLGRTFKSSNFRRLIHSAFTRLQSLNTHRRRRYSQDRDDVVRLLQQDGLHNLA 60

Query: 68  LSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCED 127
           LSRCEQ+I+HQNL+DAYGM+EGYLNLL +R+YLL   RECP EL+EA S VV+AASRC D
Sbjct: 61  LSRCEQVIKHQNLLDAYGMIEGYLNLLMDRIYLLVQQRECPDELKEAASGVVYAASRCRD 120

Query: 128 FPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASE 187
           FPELEEIKSVL+SRFGREF+ RAVELR N+ VN  +M KLSTRKPN+ESKMNLLR IASE
Sbjct: 121 FPELEEIKSVLTSRFGREFSGRAVELRNNSGVNELMMQKLSTRKPNMESKMNLLRAIASE 180

Query: 188 NGFTLQLNDKDFPEL 200
           N   LQL+ +D P L
Sbjct: 181 NVIALQLH-QDQPSL 194

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy TrEMBL
Match: A0A1S3BD77 (uncharacterized protein LOC103488605 OS=Cucumis melo OX=3656 GN=LOC103488605 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.23e-69
Identity = 117/192 (60.94%), Postives = 149/192 (77.60%), Query Frame = 0


Query: 8   LRRVFKPLLGRS-RSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLAL 67
           +RR+   ++GRS RSS F+RLVQ++   L++L   R  RY ED  D   LL +GL KLAL
Sbjct: 1   MRRILNRVVGRSFRSSGFKRLVQSSFTRLQSLTDHRRRRYSEDLNDVLSLLQDGLHKLAL 60

Query: 68  SRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCEDF 127
           SRCEQMI+HQNL+DAYG++EGYLNLL ER+ LL   RECP EL+EA SSVVFAASR +DF
Sbjct: 61  SRCEQMIKHQNLLDAYGLIEGYLNLLMERIQLLGRARECPDELKEAASSVVFAASRWKDF 120

Query: 128 PELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASEN 187
            EL +IKS+ +S+FG+EF A AVELR NN VN SI+ KLST+KP+++SKMNLL++IAS+ 
Sbjct: 121 TELGDIKSIFTSQFGKEFTAPAVELRNNNRVNQSIIQKLSTKKPDMKSKMNLLKLIASDK 180

Query: 188 GFTLQLNDKDFP 198
           G  +QLND+  P
Sbjct: 181 GIVVQLNDQGEP 192

[Close]

BLAST of Cp4.1LG01g17960 vs. ExPASy TrEMBL
Match: A0A0A0K949 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G031970 PE=3 SV=1)

HSP 1 Score: 211 bits (536), Expect = 4.31e-65
Identity = 116/208 (55.77%), Postives = 156/208 (75.00%), Query Frame = 0


Query: 8   LRRVFKPLLGRSRSSS-FRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLAL 67
           +R++ K +LGRS SSS F+R VQ++   L++L   R  R+ ED  +   LL E L +LAL
Sbjct: 1   MRKIMKRVLGRSFSSSCFKRSVQSSFTRLKSLTDHRRRRFSEDLNEVVSLLQEDLQELAL 60

Query: 68  SRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCEDF 127
           SRCEQMI+HQNL+DAYG++EGYLNLL ER++LL   RECP EL+EAVSSV+FAASR +DF
Sbjct: 61  SRCEQMIKHQNLVDAYGLIEGYLNLLIERIHLLGRERECPDELKEAVSSVIFAASRWKDF 120

Query: 128 PELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASEN 187
            EL ++KS+ +S+FG+EF ARAVELR NN VN SI+ KLS +KP+ +SKMNLL++IAS+ 
Sbjct: 121 TELGDVKSIFTSQFGKEFTARAVELRNNNRVNQSIIQKLSAKKPDTKSKMNLLKLIASDK 180

Query: 188 GFTLQLNDKDFPELEEIKSVLSSRFGRE 214
           G  ++LN+    E +  KS+   + GRE
Sbjct: 181 GIVVKLNE----EGKLSKSIQIRKRGRE 204

[Close]

BLAST of Cp4.1LG01g17960 vs. TAIR 10
Match: AT1G13340.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 79/180 (43.89%), Postives = 114/180 (63.33%), Query Frame = 0


Query: 15  LLGRS-RSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMI 74
           LLGRS +++ F+ L+  AL  L  LK  R  R  +   D   LL  G  + A  R +Q++
Sbjct: 8   LLGRSFKTNKFKSLITLALTRLSILKNQRQARLSQAISDVTELLKLGQHEHAYHRVDQVV 67

Query: 75  RHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCEDFPELEEIK 134
           + QN +D    + GY  L  +R++L    R+CP+EL EAVS ++FAASR  +FPEL+EI+
Sbjct: 68  KDQNTLDVLFFIHGYFTLCLDRIHLFEHNRDCPEELLEAVSGLLFAASRIGEFPELQEIR 127

Query: 135 SVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASENGFTLQLN 194
           +VL SRFG++ AAR++ELR N  V+  I+ KLSTR P  E +M  L+ IA+EN   L+L+
Sbjct: 128 NVLISRFGKDLAARSIELRSNCGVDPKIIQKLSTRPPPKEVRMKALKEIAAENNIVLKLD 187

[Close]

BLAST of Cp4.1LG01g17960 vs. TAIR 10
Match: AT1G34220.2 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-23
Identity = 57/167 (34.13%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 20  RSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMIRHQNLM 79
           +++  + L++  +  ++ ++  R  +  + R++ A+LL  G    A  R E +IR + +M
Sbjct: 13  KAAKCKTLLKLTIPRIKLIRNRREAQIKQMRREIAKLLETGQEATARIRVEHIIREEKMM 72

Query: 80  DAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCEDFPELEEIKSVLSSR 139
            A  ++E +  L+  RL ++   RECP +L+EA+SSV FAA RC D  EL++++ +  S+
Sbjct: 73  AAQEILELFCELIAVRLPIIEAQRECPLDLKEAISSVCFAAPRCSDLTELQQVQILFVSK 132

Query: 140 FGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASEN 187
           +G+EF A A EL+ ++ VN  ++  LS R P+ E+K+ LL+ IA E+
Sbjct: 133 YGKEFVAAASELKPDSGVNRKLVELLSVRAPSPETKLKLLKEIAEEH 179

[Close]

BLAST of Cp4.1LG01g17960 vs. TAIR 10
Match: AT1G25420.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 102.1 bits (253), Expect = 6.4e-22
Identity = 61/176 (34.66%), Postives = 102/176 (57.95%), Query Frame = 0


Query: 31  ALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALSRCEQMIRHQNLMDAYGMMEGYLN 90
           A+  ++ L+  R  +    +K+ A  L  G   +A  R E +IR  NL  AY ++E +  
Sbjct: 24  AIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRVEHVIREMNLWAAYEILELFCE 83

Query: 91  LLRERLYLLAPGRECPKELEEAVSSVVFAASRCEDFPELEEIKSVLSSRFGREFAARAVE 150
            +  R+ +L   +ECP+EL EA++S++FAA RC + P+L +IK++  +++G+EF   A E
Sbjct: 84  FILARVPILESEKECPRELREAIASIIFAAPRCSEVPDLLQIKNLFGTKYGKEFIMVASE 143

Query: 151 LRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASENGFTLQLN-DKDFPELEEIKS 206
           LR ++ VN +I+ KLS   P+  +++ +L+ IA E      LN D    E E +KS
Sbjct: 144 LRPDSGVNRTIIEKLSPTSPSGAARLKMLKEIAQE----YSLNWDSSATEAEFMKS 195

[Close]

BLAST of Cp4.1LG01g17960 vs. TAIR 10
Match: AT4G35730.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 95.9 bits (237), Expect = 4.6e-20
Identity = 56/181 (30.94%), Postives = 102/181 (56.35%), Query Frame = 0


Query: 6   RKLRRVFKPLLGRS-RSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKL 65
           +KL +    L  R   SS  +   + A+  ++ ++  R     + R+D A LL  G    
Sbjct: 12  KKLMKFSLSLFRRGFNSSKCKTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDAT 71

Query: 66  ALSRCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCE 125
           A  R E +IR QN+  A  ++E +  L+  RL ++   ++CP +L+E ++S++FAA RC 
Sbjct: 72  ARIRVEHVIREQNIQAANEIIELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCS 131

Query: 126 DFPELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIAS 185
           + PEL +++ + + ++G++F + A +LR +  VN  ++ KLS R P  E K+ +++ IA 
Sbjct: 132 EIPELGDLRDIFAKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAK 191

[Close]

BLAST of Cp4.1LG01g17960 vs. TAIR 10
Match: AT2G19710.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 95.1 bits (235), Expect = 7.9e-20
Identity = 60/179 (33.52%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 8   LRRVFKPLLGRSRSSSFRRLVQNALEHLETLKKLRHGRYVEDRKDAARLLHEGLPKLALS 67
           L+R FKP       +  +  +Q A   L+ LK  +  +  + R++ A+LL  G    A  
Sbjct: 5   LQRGFKP-------AKCKTALQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARI 64

Query: 68  RCEQMIRHQNLMDAYGMMEGYLNLLRERLYLLAPGRECPKELEEAVSSVVFAASRCEDFP 127
           R E ++R +  + AY ++  Y  LL  RL ++   + CP +L+EAV+SV+FA+ R  D P
Sbjct: 65  RVEHVVREEKTVAAYELIGIYCELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVP 124

Query: 128 ELEEIKSVLSSRFGREFAARAVELRINNTVNHSIMLKLSTRKPNLESKMNLLRVIASEN 187
           EL EI    ++++G++F+  AVELR ++ V+  ++ KLS + P+  +K+ +L  IA E+
Sbjct: 125 ELSEIFKQFTTKYGKDFSTSAVELRPDSGVSRLLVEKLSAKAPDGPTKVKILMAIAEEH 176

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54I39	2.3e-08	26.79	IST1-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289029 PE=3 SV=1	[more]
Q3ZBV1	2.8e-06	32.19	IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1	[more]
P53990	2.8e-06	32.19	IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1	[more]
Q9CX00	2.8e-06	32.19	IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1	[more]
Q568Z6	2.8e-06	32.19	IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g17960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538969.1	3.65e-127	98.97	uncharacterized protein LOC111799739 [Cucurbita pepo subsp. pepo]	[more]
XP_022963468.1	1.42e-124	97.42	uncharacterized protein LOC111463790 [Cucurbita moschata]	[more]
XP_022971780.1	1.10e-119	94.36	uncharacterized protein LOC111470458 [Cucurbita maxima]	[more]
XP_023522757.1	1.63e-101	100.00	uncharacterized protein LOC111786761, partial [Cucurbita pepo subsp. pepo]	[more]
KAG6601796.1	1.26e-99	96.86	IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032510.1...	[more]

BLAST of Cp4.1LG01g17960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHW4	6.86e-125	97.42	uncharacterized protein LOC111463790 OS=Cucurbita moschata OX=3662 GN=LOC1114637...	[more]
A0A6J1I6P0	5.31e-120	94.36	uncharacterized protein LOC111470458 OS=Cucurbita maxima OX=3661 GN=LOC111470458...	[more]
A0A6J1CEI4	3.72e-75	65.64	uncharacterized protein LOC111010490 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A1S3BD77	1.23e-69	60.94	uncharacterized protein LOC103488605 OS=Cucumis melo OX=3656 GN=LOC103488605 PE=...	[more]
A0A0A0K949	4.31e-65	55.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G031970 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g17960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13340.1	1.4e-32	43.89	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT1G34220.2	2.0e-23	34.13	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT1G25420.1	6.4e-22	34.66	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT4G35730.1	4.6e-20	30.94	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT2G19710.1	7.9e-20	33.52	Regulator of Vps4 activity in the MVB pathway protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042277	Vacuolar protein sorting-associated protein IST1-like	GENE3D	1.20.1260.60		coord: 15..196 e-value: 2.8E-45 score: 156.1
IPR005061	Vacuolar protein sorting-associated protein Ist1	PFAM	PF03398	Ist1	coord: 27..187 e-value: 1.8E-39 score: 135.3
IPR005061	Vacuolar protein sorting-associated protein Ist1	PANTHER	PTHR12161	IST1 FAMILY MEMBER	coord: 17..194
IPR005061	Vacuolar protein sorting-associated protein Ist1	PANTHER	PTHR12161	IST1 FAMILY MEMBER	coord: 196..231
None	No IPR available	PANTHER	PTHR12161:SF16	REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN	coord: 17..194
None	No IPR available	PANTHER	PTHR12161:SF16	REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN	coord: 196..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17960.1	Cp4.1LG01g17960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport