Cp4.1LG01g17920 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17920
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG01: 14539443 .. 14539943 (+)
RNA-Seq Expression	Cp4.1LG01g17920
Synteny	Cp4.1LG01g17920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATCTTTCCTCAAACAAGCGCCTCCGACTCGACTCAGCCGACTCGGAGTCCGACACACCGGAGGTCAAGCGTCTCAAAGACGACCTCCTCGGCCTTCTCGACGACGCCGACCCTGATCCCGTTGTTCAGGATCTCGATTCCGTCATCCAGAGTTTCGCCGACGAGATCTCCCCGGTCTCCTCTCCGCCGTCGCTCCCGGCAGCGATCGACGAGTCCTTGCCGGAGCTCGGGTACCTTCTCGTGGCCTCAGACGATGAGCTTGGACTCCCTCCGTCTGAGGCCTCCACCAGCCACGGCGGTGAAGCGGAGGCAGCGGAACTGACTCGAGCGTCGTCGGAGTCGTCCGGGATGGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGTTACGAGTCGTTCGAGTTGGGGGAAGGAGGGAGATTCTATAACGATACCGAATATGTTGCGTTGGATGGACTTTTTGAACATTCCGATGTGTACTCTGTTTTCTCGTGA

mRNA sequence

ATGGCGGATCTTTCCTCAAACAAGCGCCTCCGACTCGACTCAGCCGACTCGGAGTCCGACACACCGGAGGTCAAGCGTCTCAAAGACGACCTCCTCGGCCTTCTCGACGACGCCGACCCTGATCCCGTTGTTCAGGATCTCGATTCCGTCATCCAGAGTTTCGCCGACGAGATCTCCCCGGTCTCCTCTCCGCCGTCGCTCCCGGCAGCGATCGACGAGTCCTTGCCGGAGCTCGGGTACCTTCTCGTGGCCTCAGACGATGAGCTTGGACTCCCTCCGTCTGAGGCCTCCACCAGCCACGGCGGTGAAGCGGAGGCAGCGGAACTGACTCGAGCGTCGTCGGAGTCGTCCGGGATGGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGTTACGAGTCGTTCGAGTTGGGGGAAGGAGGGAGATTCTATAACGATACCGAATATGTTGCGTTGGATGGACTTTTTGAACATTCCGATGTGTACTCTGTTTTCTCGTGA

Coding sequence (CDS)

ATGGCGGATCTTTCCTCAAACAAGCGCCTCCGACTCGACTCAGCCGACTCGGAGTCCGACACACCGGAGGTCAAGCGTCTCAAAGACGACCTCCTCGGCCTTCTCGACGACGCCGACCCTGATCCCGTTGTTCAGGATCTCGATTCCGTCATCCAGAGTTTCGCCGACGAGATCTCCCCGGTCTCCTCTCCGCCGTCGCTCCCGGCAGCGATCGACGAGTCCTTGCCGGAGCTCGGGTACCTTCTCGTGGCCTCAGACGATGAGCTTGGACTCCCTCCGTCTGAGGCCTCCACCAGCCACGGCGGTGAAGCGGAGGCAGCGGAACTGACTCGAGCGTCGTCGGAGTCGTCCGGGATGGGAGAGATTTGGGGATTTGAAGATGCGATTCCGAGTTACGAGTCGTTCGAGTTGGGGGAAGGAGGGAGATTCTATAACGATACCGAATATGTTGCGTTGGATGGACTTTTTGAACATTCCGATGTGTACTCTGTTTTCTCGTGA

Protein sequence

MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISPVSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMGEIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS

Homology

[Close]

BLAST of Cp4.1LG01g17920 vs. NCBI nr
Match: XP_023538923.1 (uncharacterized protein LOC111799678 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316 bits (809), Expect = 2.41e-108
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60
           MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120
           VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG
Sbjct: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Cp4.1LG01g17920 vs. NCBI nr
Match: XP_022938336.1 (uncharacterized protein LOC111444467 [Cucurbita moschata] >XP_022959152.1 uncharacterized protein LOC111460226 [Cucurbita moschata])

HSP 1 Score: 311 bits (796), Expect = 2.32e-106
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60
           MADLSSNKRLRLDS DSESDTPEVKRLKDDLLGLL+DADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MADLSSNKRLRLDSVDSESDTPEVKRLKDDLLGLLEDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120
           VSSPPSLPAA DESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG
Sbjct: 61  VSSPPSLPAATDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Cp4.1LG01g17920 vs. NCBI nr
Match: KAG6601790.1 (hypothetical protein SDJN03_07023, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032506.1 hypothetical protein SDJN02_06555, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311 bits (796), Expect = 2.32e-106
Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60
           MAD SSNKRLRLDS DSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MADFSSNKRLRLDSVDSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120
           VSSPPSLPAA DESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG
Sbjct: 61  VSSPPSLPAATDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Cp4.1LG01g17920 vs. NCBI nr
Match: XP_022993320.1 (uncharacterized protein LOC111489362 [Cucurbita maxima])

HSP 1 Score: 278 bits (712), Expect = 1.48e-93
Identity = 147/166 (88.55%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60
           M D SS KRLR+DSADSESD+PEVKRLKDDLL LLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSTKRLRVDSADSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120
           VSSPP  PAA  ESLPELGYLL+ASDDELGLPPS+ASTS GGE+E AELTRASSESSGMG
Sbjct: 61  VSSPPPFPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           EIWGFEDAIPSYESFELGEG RFY+D+EYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 166

[Close]

BLAST of Cp4.1LG01g17920 vs. NCBI nr
Match: KAG7016709.1 (hypothetical protein SDJN02_21819, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 269 bits (688), Expect = 6.08e-90
Identity = 145/166 (87.35%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60
           M D SSNKRLR+DS DSESD+PEVKRLKDDLL LLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSNKRLRVDSVDSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120
           VSSPP LPAA  ESLPELGYLL+ASDDELGLPPS+ASTS GGE+E AELTRASSESSGMG
Sbjct: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           EIWGFEDAIPS   FELGEG RFY+D+EYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPS---FELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Cp4.1LG01g17920 vs. ExPASy TrEMBL
Match: A0A6J1H3R7 (uncharacterized protein LOC111444467 OS=Cucurbita moschata OX=3662 GN=LOC111460226 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 1.12e-106
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60
           MADLSSNKRLRLDS DSESDTPEVKRLKDDLLGLL+DADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MADLSSNKRLRLDSVDSESDTPEVKRLKDDLLGLLEDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120
           VSSPPSLPAA DESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG
Sbjct: 61  VSSPPSLPAATDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Cp4.1LG01g17920 vs. ExPASy TrEMBL
Match: A0A6J1JY78 (uncharacterized protein LOC111489362 OS=Cucurbita maxima OX=3661 GN=LOC111489362 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 7.17e-94
Identity = 147/166 (88.55%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60
           M D SS KRLR+DSADSESD+PEVKRLKDDLL LLDDADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSTKRLRVDSADSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120
           VSSPP  PAA  ESLPELGYLL+ASDDELGLPPS+ASTS GGE+E AELTRASSESSGMG
Sbjct: 61  VSSPPPFPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           EIWGFEDAIPSYESFELGEG RFY+D+EYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 166

[Close]

BLAST of Cp4.1LG01g17920 vs. ExPASy TrEMBL
Match: A0A6J1FGC2 (uncharacterized protein LOC111445164 OS=Cucurbita moschata OX=3662 GN=LOC111445164 PE=4 SV=1)

HSP 1 Score: 258 bits (658), Expect = 9.91e-86
Identity = 142/166 (85.54%), Postives = 149/166 (89.76%), Query Frame = 0


Query: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60
           M D SSNKRLR+DS   ESD+PEVKRLKDDLL LLD ADPDPVVQDLDSVIQSFADEISP
Sbjct: 1   MEDPSSNKRLRVDS---ESDSPEVKRLKDDLLDLLDGADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120
           VSSPP LPAA  ESLPELGYLL+ASDDELGLPPS+ASTS GGE+E AELTRASSESSGMG
Sbjct: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           EIWGFEDAIPS   FELGEG RFY+D+EYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPS---FELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 160

[Close]

BLAST of Cp4.1LG01g17920 vs. ExPASy TrEMBL
Match: A0A1S3BDY1 (uncharacterized protein LOC103488614 OS=Cucumis melo OX=3656 GN=LOC103488614 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 2.74e-79
Identity = 129/163 (79.14%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 5   SSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISPVSSP 64
           S NKR R+DS DSESD+PEVKRL+DDLLGLLDD+DPDP VQDLDSVIQSFADEISPVSSP
Sbjct: 5   SPNKRFRVDSLDSESDSPEVKRLRDDLLGLLDDSDPDPTVQDLDSVIQSFADEISPVSSP 64

Query: 65  PSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMGEIWG 124
           P  PAA  E    LGYLL+ASDDELGLPPS+ASTSHGGE E  E+ R SSESSG+GEIWG
Sbjct: 65  PPPPAAPSE----LGYLLLASDDELGLPPSDASTSHGGETEVVEVARGSSESSGIGEIWG 124

Query: 125 FEDAIPSYESFEL-GEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           FEDA+PSYE+ EL G G RFYN+ EYVA DGLFEHSDVYSVFS
Sbjct: 125 FEDAVPSYETLELVGGGERFYNEMEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Cp4.1LG01g17920 vs. ExPASy TrEMBL
Match: A0A0A0K873 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G038510 PE=4 SV=1)

HSP 1 Score: 240 bits (612), Expect = 1.11e-78
Identity = 127/163 (77.91%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 5   SSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISPVSSP 64
           S NKRLR+DS DSESD+PEVKRL+DDLLGLLDD+DPDP VQDLDS+IQSFADEISPVSSP
Sbjct: 5   SPNKRLRVDSLDSESDSPEVKRLRDDLLGLLDDSDPDPTVQDLDSLIQSFADEISPVSSP 64

Query: 65  PSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMGEIWG 124
           P  PAA  E    LGYLL+ASDDELGLPPS ASTSHGG+ E  EL R SS+SSG+G+IWG
Sbjct: 65  PPPPAAPSE----LGYLLLASDDELGLPPSHASTSHGGQTEVVELARESSDSSGIGQIWG 124

Query: 125 FEDAIPSYESFEL-GEGGRFYNDTEYVALDGLFEHSDVYSVFS 166
           FEDA+PSYE+ EL G+G RFYN+ EYVA DGLFEHSDVYSVFS
Sbjct: 125 FEDAVPSYETLELVGDGERFYNEMEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Cp4.1LG01g17920 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 80/166 (48.19%), Postives = 110/166 (66.27%), Query Frame = 0


Query: 3   DLSSNKRLRLDSAD-SESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISPV 62
           D +  KR+R +S D +  D+PEVKRL+DDL  +LDD+DP+PV QDLDSV++SF DE+S V
Sbjct: 12  DSAEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTV 71

Query: 63  SSPPSL-PAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAE------AAELTRASS 122
           ++  +   +   E+ P+LGYLL ASDDELGLPP  + +      E        +L RASS
Sbjct: 72  TTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASS 131

Query: 123 ESSGMGEIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSD 161
           +SSG+ EIWGFED + +Y   + G G    +  +YVA++GLFE SD
Sbjct: 132 DSSGIDEIWGFEDHVSNYGGLDFGSG--VGDGGDYVAVEGLFEFSD 175

[Close]

BLAST of Cp4.1LG01g17920 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 3   DLSSNKRLRLDSAD-SESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISPV 62
           D +  KR+R +S D +  D+PEVKRL+DDL  +LDD+DP+PV QDLDSV++SF DE+S V
Sbjct: 12  DSAEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTV 71

Query: 63  SSPPSL-PAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAE------AAELTRASS 122
           ++  +   +   E+ P+LGYLL ASDDELGLPP  + +      E        +L RASS
Sbjct: 72  TTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASS 131

Query: 123 ESSGMGEIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHS 160
           +SSG+ EIWGFED + +Y   + G G    +  +YVA++G F ++
Sbjct: 132 DSSGIDEIWGFEDHVSNYGGLDFGSG--VGDGGDYVAVEGFFYYT 174

[Close]

BLAST of Cp4.1LG01g17920 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 79/166 (47.59%), Postives = 109/166 (65.66%), Query Frame = 0


Query: 3   DLSSNKRLRLDSAD-SESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISPV 62
           D +  KR+R +S D +  D+PEVKRL+DDL  +LDD+DP+PV QDLDSV++SF DE+S V
Sbjct: 12  DSAEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTV 71

Query: 63  SSPPSL-PAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAE------AAELTRASS 122
           ++  +   +   E+ P+LGYLL ASDDELGLPP  + +      E        +L RASS
Sbjct: 72  TTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASS 131

Query: 123 ESSGMGEIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGL-FEHS 160
           +SSG+ EIWGFED + +Y   + G G    +  +YVA++GL F HS
Sbjct: 132 DSSGIDEIWGFEDHVSNYGGLDFGSG--VGDGGDYVAVEGLSFFHS 175

[Close]

BLAST of Cp4.1LG01g17920 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 2.5e-20
Identity = 73/165 (44.24%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 3   DLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISPVS 62
           D   NKR+R D  D   D+P+VKRL+DD   L DD+  DPV QDLDSV++SF +E+S  +
Sbjct: 13  DSVGNKRVR-DGLD--LDSPDVKRLRDD---LFDDSGLDPVSQDLDSVMKSFENELSTTT 72

Query: 63  SPPSLPAAIDESLPELGYLLVASDDELGLP----PSEASTSHGGEAEAAELTRASSESSG 122
           +  S      E+ P+LGYL  ASDDELGLP    P +       E    EL RASS+SS 
Sbjct: 73  AALS----SGETQPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEETVTELVRASSDSSE 132

Query: 123 MGEIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYS 164
           +GE+ GFED +  +   +LG+ G F    EY   DG  +  D++S
Sbjct: 133 VGELCGFEDHVTEFGPCDLGDDGLF----EY--FDGCLDSGDLFS 161

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17920 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g17920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538923.1	2.41e-108	100.00	uncharacterized protein LOC111799678 [Cucurbita pepo subsp. pepo]	[more]
XP_022938336.1	2.32e-106	98.19	uncharacterized protein LOC111444467 [Cucurbita moschata] >XP_022959152.1 unchar...	[more]
KAG6601790.1	2.32e-106	98.19	hypothetical protein SDJN03_07023, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022993320.1	1.48e-93	88.55	uncharacterized protein LOC111489362 [Cucurbita maxima]	[more]
KAG7016709.1	6.08e-90	87.35	hypothetical protein SDJN02_21819, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG01g17920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3R7	1.12e-106	98.19	uncharacterized protein LOC111444467 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A6J1JY78	7.17e-94	88.55	uncharacterized protein LOC111489362 OS=Cucurbita maxima OX=3661 GN=LOC111489362...	[more]
A0A6J1FGC2	9.91e-86	85.54	uncharacterized protein LOC111445164 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A1S3BDY1	2.74e-79	79.14	uncharacterized protein LOC103488614 OS=Cucumis melo OX=3656 GN=LOC103488614 PE=...	[more]
A0A0A0K873	1.11e-78	77.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G038510 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g17920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	1.3e-29	48.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	1.2e-27	46.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	1.2e-27	47.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	2.5e-20	44.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..24
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 9..161
None	No IPR available	PANTHER	PTHR34539:SF15	SUBFAMILY NOT NAMED	coord: 9..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17920.1	Cp4.1LG01g17920.1	mRNA