Cp4.1LG01g17850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17850
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Translocase subunit seca
Location	Cp4.1LG01: 14234070 .. 14236082 (+)
RNA-Seq Expression	Cp4.1LG01g17850
Synteny	Cp4.1LG01g17850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTCTTTTTCCTAAAGTTTTCATCTTTTATTTATTTATTTTTTTCTTACCTGAATTAATATTTCAAATTTCCTTAAAATATTATTGTAAGAAATTAAAATCACTGACCATATCTAAATTGTAGCATTAATCTTTTTAAAAATAGGCATTCAAATTTAATAATATTTTCCTTAAATAAATTAAAAAAAGGGGGTGAAGACAGAGGAAATCTCCCTGTCTCCTTCCCTATCTCTGTTTCTCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAATAATGTATTACCCTTTTCTCTCTCTGCTCCTTTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGACTTGCCCCATCTTATAACACGCTCCTCGTCTCCTTCCCCTTCCTTCCTCCCCTTTTTCTCTTTCCGCTCAACATTTTCTCGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGGTATTGTTTCTCTTCTGGCTTTTTTTTCTTTCACTCTGTTTCCTTCCATCTCAAACTTCCAATTTTCAGATCTCTGTACAACACCAATTACTTCCCACTTTCTTAACCTCTTGCATGATTCAGTTCAAAAAAAAGAAAGAAAAAAAAAATCTGATTTTTCTGCTACATCTATTGGGCGATTCGTTTTTTTGGGTTCTTTATTTTAATTTTTGTTTCTGTGAATTGGGTTTTTTTTTTTTTTTTTTTTTNTTCTTTTCTTTTCTTTTCTTGTTTGTGTTCAAGATGTGAACTTGAGCTGCTTGATTTTGATTTGTTTGACCAGATCTTGTTTTTCTCTTATATCTAATAAGGCTATACTCTTGTCCCTACTAACAGAGAGAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCTGCAGACACCGACCGCCGTGAACGACTGGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGTACATAATTTTGCAAAGCTATTAAAACTCAAATTGATCCAACAAGAGGATTATTAATTAATTTGTTCTTGTGTGCGGTTAACAGGAAGGTTGTGATTTGGAGAATTTTAACAGTACTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAAGGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATCCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAATAAAAACCTAACCAATGATGTGGATGAAGAAGAAAGAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAAACACCATTATTGTATATAACGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCGTTGTTAGGTTTGTGTCTATTTAGATGAGTTGAGGGTTGATTGAGAGAGAGAATAAAAGGCTGAGAGAGAGATTATTCATAGCAGCTTGTGAATGAGAAAACATGTACAAATGAAGCTGCAAATTGAGTATGAAACACAAGCATTCATATCTTAAATTTTCATTTCTCTTCTACACTTATGCTTTCATTTCTTACTTCTTCTACAAAATATATGACCCGTTTTTTGGAGATATTGTCTTTAGTCAATTTATGGAGATATTGTTAATTAGGTTTGTAAACGAGGCATGAACGCTTTCAGTCTTATCTGTGAAGGGTATCACCGTGTTCACTTTGATCCTCTTGATTCGCACTAGTTGGTCTTTCTTCAAACCGTA

mRNA sequence

CTTTTTCTTTTTCCTAAAGTTTTCATCTTTTATTTATTTATTTTTTTCTTACCTGAATTAATATTTCAAATTTCCTTAAAATATTATTGTAAGAAATTAAAATCACTGACCATATCTAAATTGTAGCATTAATCTTTTTAAAAATAGGCATTCAAATTTAATAATATTTTCCTTAAATAAATTAAAAAAAGGGGGTGAAGACAGAGGAAATCTCCCTGTCTCCTTCCCTATCTCTGTTTCTCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAATAATGTATTACCCTTTTCTCTCTCTGCTCCTTTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGACTTGCCCCATCTTATAACACGCTCCTCGTCTCCTTCCCCTTCCTTCCTCCCCTTTTTCTCTTTCCGCTCAACATTTTCTCGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGAGAGAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCTGCAGACACCGACCGCCGTGAACGACTGGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGAAGGTTGTGATTTGGAGAATTTTAACAGTACTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAAGGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATCCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAATAAAAACCTAACCAATGATGTGGATGAAGAAGAAAGAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAAACACCATTATTGTATATAACGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCGTTGTTAGGTTTGTGTCTATTTAGATGAGTTGAGGGTTGATTGAGAGAGAGAATAAAAGGCTGAGAGAGAGATTATTCATAGCAGCTTGTGAATGAGAAAACATGTACAAATGAAGCTGCAAATTGAGTATGAAACACAAGCATTCATATCTTAAATTTTCATTTCTCTTCTACACTTATGCTTTCATTTCTTACTTCTTCTACAAAATATATGACCCGTTTTTTGGAGATATTGTCTTTAGTCAATTTATGGAGATATTGTTAATTAGGTTTGTAAACGAGGCATGAACGCTTTCAGTCTTATCTGTGAAGGGTATCACCGTGTTCACTTTGATCCTCTTGATTCGCACTAGTTGGTCTTTCTTCAAACCGTA

Coding sequence (CDS)

ATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCTGCAGACACCGACCGCCGTGAACGACTGGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGAAGGTTGTGATTTGGAGAATTTTAACAGTACTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAAGGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATCCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAA

Protein sequence

MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

Homology

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BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: XP_023538993.1 (uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353 bits (905), Expect = 9.40e-123
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120
           ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS
Sbjct: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: KAG7032498.1 (hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344 bits (883), Expect = 2.13e-119
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120
           ALDLLF K GCDLENFNS+STQLASSPPYLCGTPPSRVANPLIQDARFG EKPKMLPVFS
Sbjct: 61  ALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: XP_022923501.1 (uncharacterized protein LOC111431174 [Cucurbita moschata])

HSP 1 Score: 344 bits (883), Expect = 2.13e-119
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND
Sbjct: 1   MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120
           ALDLLFFK GCDLENFNS+STQLASSPPYLCGTPPSRVANPLIQDARFG EKPKMLPVFS
Sbjct: 61  ALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: XP_022971782.1 (uncharacterized protein LOC111470460 [Cucurbita maxima])

HSP 1 Score: 340 bits (873), Expect = 7.14e-118
Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AAND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60

Query: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120
           ALDLLFFK GCDLENF S+STQLASSPPYLCGTPPSRVANPLIQDARFG EKPKMLPVFS
Sbjct: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: KAG6601783.1 (hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342 bits (877), Expect = 2.61e-117
Identity = 168/173 (97.11%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND
Sbjct: 78  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 137

Query: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120
           ALDLLF K GCDLENFNS+ TQLASSPPYLCGTPPSRVANPLIQDARFG EKPKMLPVFS
Sbjct: 138 ALDLLFLKGGCDLENFNSSITQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 197

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 198 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 250

[Close]

BLAST of Cp4.1LG01g17850 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1)

HSP 1 Score: 344 bits (883), Expect = 1.03e-119
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND
Sbjct: 1   MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120
           ALDLLFFK GCDLENFNS+STQLASSPPYLCGTPPSRVANPLIQDARFG EKPKMLPVFS
Sbjct: 61  ALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Cp4.1LG01g17850 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1)

HSP 1 Score: 340 bits (873), Expect = 3.46e-118
Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AAND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60

Query: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120
           ALDLLFFK GCDLENF S+STQLASSPPYLCGTPPSRVANPLIQDARFG EKPKMLPVFS
Sbjct: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Cp4.1LG01g17850 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 1.30e-80
Identity = 125/158 (79.11%), Postives = 132/158 (83.54%), Query Frame = 0


Query: 16  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLEN 75
           E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF K GC LEN
Sbjct: 6   EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLEN 65

Query: 76  FNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTD 135
           FNS++ QLASSPPY CG+PPSRVANPLIQDARFG EKPK+LP+FSP  A PP SPPPS  
Sbjct: 66  FNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPLSPPPSAG 125

Query: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 126 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of Cp4.1LG01g17850 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 1.07e-79
Identity = 124/158 (78.48%), Postives = 132/158 (83.54%), Query Frame = 0


Query: 16  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLEN 75
           E MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF K GC LE 
Sbjct: 6   EEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEK 65

Query: 76  FNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTD 135
           FNS++TQLASS PY CG+PPSRVANPLIQDARFG EKPK+LP+FS   A PP SPPPS  
Sbjct: 66  FNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPPSAG 125

Query: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 126 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of Cp4.1LG01g17850 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 2.42e-79
Identity = 123/156 (78.85%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 18  MRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLENFN 77
           MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF K GC LE FN
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEKFN 60

Query: 78  STSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTDRN 137
           S++TQLASS PY CG+PPSRVANPLIQDARFG EKPK+LP+FS   A PP SPPPS  R 
Sbjct: 61  SSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPPSAGRK 120

Query: 138 GGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173
           GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 GGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

[Close]

BLAST of Cp4.1LG01g17850 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 87/188 (46.28%), Postives = 110/188 (58.51%), Query Frame = 0


Query: 1   MNQVAVQRNVFS----VREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNP-----FRH 60
           MN  AVQ N F+    +R   +   + D +  +VCPKPRR+GL N   + +      F H
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERD-QTTVVCPKPRRIGLRNNHHHPSRSLRCYFSH 60

Query: 61  RF---DSVAANDALDLLFFKEGCDLENFNSTSTQLASSP-PYLCGTPPSRVANPLIQDAR 120
           +    +S A  D LD++  K+G   E  N    Q+  SP P+LCG+PPSRVANPL QDAR
Sbjct: 61  QLELCESKAETDILDIILTKDGYGAEQVNK---QVIDSPSPFLCGSPPSRVANPLTQDAR 120

Query: 121 FGKEKPKMLPVFSPEVA-PPPYSPPPSTDRNGGW-VRPNFGNIPAVRIEGFDCRLDRERR 174
           F  E   +  V  P++  PP  SP  S+ R GG  VR NFGN P VR+EGFDC LDR+ R
Sbjct: 121 FRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSR 180

[Close]

BLAST of Cp4.1LG01g17850 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 121.7 bits (304), Expect = 5.8e-28
Identity = 84/187 (44.92%), Postives = 105/187 (56.15%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MN   +Q+N F  REEMM     DR++ +VCPKPRR+GL+   V   P R      AA  
Sbjct: 67  MNHCNLQQNAFMSREEMM---GFDRKDLVVCPKPRRVGLLANNV-IRPLRLHMSQAAA-- 126

Query: 61  ALDLLFFKEGCDL-------ENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKP 120
             DL   K G +L       E+  +    L+SSPPY  G+PPSR ANPL QDARF  EK 
Sbjct: 127 --DLCDSKAGAELLEIIRRKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKL 186

Query: 121 KMLPVFSPEVAP------PPYSPPPSTDRNGGWVRPNFG-NIPAVRIEGFDCRLDRERRN 174
             +   SP + P      P  S   S+  + G VR  FG N PAVR+EGFDC L+R+R+N
Sbjct: 187 NPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQN 244

[Close]

BLAST of Cp4.1LG01g17850 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 8.1e-22
Identity = 73/184 (39.67%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF--- 60
           MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N   + +      H+    
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELC 61

Query: 61  DSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKP 120
           +S + ++ LD +  K G      + T T + + P +  G+PPSRV+NPL +D+ F +E  
Sbjct: 62  ESNSGSEILDFILTKGGGGGGEQDQTRT-VMTPPLFFTGSPPSRVSNPLTKDSLFREE-- 121

Query: 121 KMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSI 174
            +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRSI
Sbjct: 122 -LLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSI 176

[Close]

BLAST of Cp4.1LG01g17850 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 8.1e-22
Identity = 73/184 (39.67%), Postives = 104/184 (56.52%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF--- 60
           MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N   + +      H+    
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELC 61

Query: 61  DSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKP 120
           +S + ++ LD +  K G      + T T + + P +  G+PPSRV+NPL +D+ F +E  
Sbjct: 62  ESNSGSEILDFILTKGGGGGGEQDQTRT-VMTPPLFFTGSPPSRVSNPLTKDSLFREE-- 121

Query: 121 KMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSI 174
            +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRSI
Sbjct: 122 -LLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSI 176

[Close]

BLAST of Cp4.1LG01g17850 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-21
Identity = 75/177 (42.37%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 1   MNQVAVQRNVFSVREEMMRAAD--TDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAA 60
           MN  ++Q+N F  REE        +   + +VCPKPRR    N  +   PFR  F    A
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRR---ANNVI--RPFRLHFSLSGA 60

Query: 61  NDALDLLFFKEGCD-LENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLP 120
           +D  D    K G D L+ F    +  + SPP+  G+PPSR ANPL QDARFG EK   L 
Sbjct: 61  DDVCD---SKAGEDLLDIFRRKESVSSRSPPFFLGSPPSRAANPLAQDARFGDEK---LN 120

Query: 121 VFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPA-VRIEGFDCRLDRERRNRSIPALA 174
             SP ++P     P ++    G  R  FG  PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 121 TVSPSLSP---LLPSASRVKSGCGRMKFGVKPATVRVEGFDC-LNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17850 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g17850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538993.1	9.40e-123	100.00	uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo]	[more]
KAG7032498.1	2.13e-119	97.69	hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022923501.1	2.13e-119	97.69	uncharacterized protein LOC111431174 [Cucurbita moschata]	[more]
XP_022971782.1	7.14e-118	95.95	uncharacterized protein LOC111470460 [Cucurbita maxima]	[more]
KAG6601783.1	2.61e-117	97.11	hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG01g17850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6Z2	1.03e-119	97.69	uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1I2X1	3.46e-118	95.95	uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460...	[more]
A0A0A0KRF1	1.30e-80	79.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1	[more]
A0A1S3CR46	1.07e-79	78.48	uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=...	[more]
A0A5D3C147	2.42e-79	78.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cp4.1LG01g17850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	1.2e-30	46.28	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16110.1	5.8e-28	44.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	8.1e-22	39.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	8.1e-22	39.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02555.1	1.8e-21	42.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..133
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 1..173
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17850.1	Cp4.1LG01g17850.1	mRNA