Cp4.1LG01g17830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17830
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	basic form of pathogenesis-related protein 1-like
Location	Cp4.1LG01: 14062174 .. 14062677 (+)
RNA-Seq Expression	Cp4.1LG01g17830
Synteny	Cp4.1LG01g17830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACACCCCCCGTGCCTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAGAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGACCGTACGGGGAAAACATAGCCGCAGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCCGTTGTACGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGTAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCATGTAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGAAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

mRNA sequence

ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACACCCCCCGTGCCTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAGAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGACCAGTGCCATGTAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGAAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

Coding sequence (CDS)

ATGTGGACTCAAACCCTTCCGATCATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACACCCCCCGTGCCTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAGAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGACCAGTGCCATGTAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGAAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

Protein sequence

MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV

Homology

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.8e-17
Identity = 55/156 (35.26%), Postives = 68/156 (43.59%), Query Frame = 0


Query: 6   LPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKR 65
           L  + A   TF  L+  + AQN+P+ YL  HN AR QVGVGPM W N +AAYAQ YA +R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  KGDCAMIHSTGPV-------------------------------------PCKANSQ--- 104
            GDC MIHS GP                                       C   +Q   
Sbjct: 64  IGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVW 123

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-15
Identity = 49/152 (32.24%), Postives = 66/152 (43.42%), Query Frame = 0


Query: 9   MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           +  F+A    L+  + AQ++P+ YL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69  CAMIHSTGP--------------------------------------------------- 104
           C +IHS GP                                                   
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSV 129

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.3e-14
Identity = 48/159 (30.19%), Postives = 68/159 (42.77%), Query Frame = 0


Query: 2   WTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           +++ L I+AA +   +  L    AQ++ + Y+  HN+AR+Q+GVGPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGALVVPL---KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62  AEKRKGDCAMIHSTGP-------------------------------------------- 104
           A + KGDC ++HS GP                                            
Sbjct: 66  ANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNGVCGHYTQ 125

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy Swiss-Prot
Match: Q04108 (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 49/153 (32.03%), Postives = 64/153 (41.83%), Query Frame = 0


Query: 11  AFMATFIFLLAL---TNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 70
           + + T + +LA+     AQN+P+ YLA+HN ARAQVGVGPM W   +A+ AQ YA  R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 71  DCAMIHS----------------------------------------------------- 104
           DC +IHS                                                     
Sbjct: 67  DCNLIHSGAGENLAKGGGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNS 126

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy Swiss-Prot
Match: P04284 (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13
Identity = 49/153 (32.03%), Postives = 64/153 (41.83%), Query Frame = 0


Query: 11  AFMATFIFLLAL---TNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKG 70
           + + T + +LA+     AQN+P+ YLA+HN ARAQVGVGPM W   +A+ AQ YA  R G
Sbjct: 7   SLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAG 66

Query: 71  DCAMIHS----------------------------------------------------- 104
           DC +IHS                                                     
Sbjct: 67  DCNLIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNS 126

[Close]

BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: XP_023538576.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198 bits (504), Expect = 7.12e-63
Identity = 108/167 (64.67%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGP------------------------------------------- 108
           YAEKRKGDCAMIHSTGP                                           
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

[Close]

BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: XP_023521428.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188 bits (477), Expect = 9.20e-59
Identity = 103/167 (61.68%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MW QTLPIMAAFMATFIFLLALTNAQN P  YLALHNRARAQVGVGPMQWSNTVA YAQA
Sbjct: 1   MWAQTLPIMAAFMATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 61  YAEKRKGDCAMIHSTGP------------------------------------------- 108
           YAEKRKGDCAMIHSTGP                                           
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

[Close]

BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: XP_023538226.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185 bits (470), Expect = 1.07e-57
Identity = 102/167 (61.08%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIMAAFMATFIFLLALTNAQN PR YL LHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGP------------------------------------------- 108
           YA+KRKGDC MIHSTGP                                           
Sbjct: 61  YAKKRKGDCTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGH 120

[Close]

BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: XP_022958939.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 185 bits (470), Expect = 1.43e-57
Identity = 101/167 (60.48%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF FLLALTNAQN P  YLALHNRARAQVGVGPMQWSNTVA YAQA
Sbjct: 1   MWTQTLPIMVAFIATFTFLLALTNAQNAPSDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 61  YAEKRKGDCAMIHSTGP------------------------------------------- 108
           YAEKRKGDCAMIHSTGP                                           
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHALNKCVGGECGH 120

[Close]

BLAST of Cp4.1LG01g17830 vs. NCBI nr
Match: XP_022958926.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 185 bits (470), Expect = 2.86e-57
Identity = 101/166 (60.84%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 2   WTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           WTQTLPIM AF+ATFIFLLALTNAQN P  YLALHNRARAQVGVGPMQWSNTVAAYAQAY
Sbjct: 33  WTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 92

Query: 62  AEKRKGDCAMIHSTGP-------------------------------------------- 108
           A+KRKGDCAMIHSTGP                                            
Sbjct: 93  AKKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHY 152

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy TrEMBL
Match: A0A6J1H6J8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460079 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 6.90e-58
Identity = 101/167 (60.48%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF FLLALTNAQN P  YLALHNRARAQVGVGPMQWSNTVA YAQA
Sbjct: 1   MWTQTLPIMVAFIATFTFLLALTNAQNAPSDYLALHNRARAQVGVGPMQWSNTVAVYAQA 60

Query: 61  YAEKRKGDCAMIHSTGP------------------------------------------- 108
           YAEKRKGDCAMIHSTGP                                           
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHALNKCVGGECGH 120

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 1.38e-57
Identity = 101/166 (60.84%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 2   WTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           WTQTLPIM AF+ATFIFLLALTNAQN P  YLALHNRARAQVGVGPMQWSNTVAAYAQAY
Sbjct: 33  WTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQAY 92

Query: 62  AEKRKGDCAMIHSTGP-------------------------------------------- 108
           A+KRKGDCAMIHSTGP                                            
Sbjct: 93  AKKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHY 152

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 4.24e-57
Identity = 101/167 (60.48%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTL IMAAFM TFIFLLALT AQN P  YLALHNRARA+VGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLRIMAAFMVTFIFLLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGP------------------------------------------- 108
           YAEKRKGDCAMIHSTGP                                           
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGH 120

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy TrEMBL
Match: A0A6J1H381 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459977 PE=4 SV=1)

HSP 1 Score: 185 bits (469), Expect = 4.81e-57
Identity = 101/167 (60.48%), Postives = 104/167 (62.28%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATFIFLLALTNAQN P  YLALHNRARAQVGVGPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFIFLLALTNAQNAPGDYLALHNRARAQVGVGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGP------------------------------------------- 108
           YA+KRKGDCAMIHSTGP                                           
Sbjct: 61  YAKKRKGDCAMIHSTGPYGENIAAGYYPKFTGADAVKLWVNEKPLYDHASNKCVGGECGH 120

[Close]

BLAST of Cp4.1LG01g17830 vs. ExPASy TrEMBL
Match: A0A6J1H6F3 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460042 PE=4 SV=1)

HSP 1 Score: 182 bits (463), Expect = 6.02e-57
Identity = 99/167 (59.28%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 1   MWTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQA 60
           MWTQTLPIM AF+ATF FLLALTNAQN P  YLALHNRARAQV +GPMQWSNTVAAYAQA
Sbjct: 1   MWTQTLPIMVAFIATFNFLLALTNAQNAPGDYLALHNRARAQVSIGPMQWSNTVAAYAQA 60

Query: 61  YAEKRKGDCAMIHSTGP------------------------------------------- 108
           YAEKRKGDCAMIHSTGP                                           
Sbjct: 61  YAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGH 120

[Close]

BLAST of Cp4.1LG01g17830 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-19
Identity = 51/147 (34.69%), Postives = 67/147 (45.58%), Query Frame = 0


Query: 16  FIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHST 75
           F+ L+    AQ++P+ +LA+HNRARA+VGVGP++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 76  G----------------------------------------------------------- 104
           G                                                           
Sbjct: 77  GSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCA 136

[Close]

BLAST of Cp4.1LG01g17830 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16
Identity = 49/152 (32.24%), Postives = 66/152 (43.42%), Query Frame = 0


Query: 9   MAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGD 68
           +  F+A    L+  + AQ++P+ YL +HN+AR  VGVGPMQW   VAAYA++YAE+ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69  CAMIHSTGP--------------------------------------------------- 104
           C +IHS GP                                                   
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSV 129

[Close]

BLAST of Cp4.1LG01g17830 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 80.5 bits (197), Expect = 9.2e-16
Identity = 48/159 (30.19%), Postives = 68/159 (42.77%), Query Frame = 0


Query: 2   WTQTLPIMAAFMATFIFLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAY 61
           +++ L I+AA +   +  L    AQ++ + Y+  HN+AR+Q+GVGPMQW   +AAYA+ Y
Sbjct: 6   YSRILIILAALVGALVVPL---KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNY 65

Query: 62  AEKRKGDCAMIHSTGP-------------------------------------------- 104
           A + KGDC ++HS GP                                            
Sbjct: 66  ANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNGVCGHYTQ 125

[Close]

BLAST of Cp4.1LG01g17830 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 48/143 (33.57%), Postives = 61/143 (42.66%), Query Frame = 0


Query: 21  ALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGP--- 80
           A  N    P+  L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  DCAM HS GP   
Sbjct: 34  ANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGE 93

Query: 81  --------------------------------------------------------VPCK 104
                                                                   V CK
Sbjct: 94  NLAAGWGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCK 153

[Close]

BLAST of Cp4.1LG01g17830 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.7e-15
Identity = 49/146 (33.56%), Postives = 59/146 (40.41%), Query Frame = 0


Query: 18  FLLALTNAQNTPRAYLALHNRARAQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGP 77
           FL+  TNAQNTP+ YL  HN ARAQVGV  + W  T+AAYA  Y+  RK DC ++HS GP
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 78  ------------------------------------------------------------ 104
                                                                       
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCAR 135

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	4.8e-17	35.26	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P33154	1.5e-15	32.24	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
Q9ZNS4	1.3e-14	30.19	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]
Q04108	1.1e-13	32.03	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P04284	1.9e-13	32.03	Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum OX=4081 GN=PR1B1 PE=...	[more]

BLAST of Cp4.1LG01g17830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538576.1	7.12e-63	64.67	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023521428.1	9.20e-59	61.68	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023538226.1	1.07e-57	61.08	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958939.1	1.43e-57	60.48	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_022958926.1	2.86e-57	60.84	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG01g17830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6J8	6.90e-58	60.48	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H3H8	1.38e-57	60.84	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1I475	4.24e-57	60.48	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1H381	4.81e-57	60.48	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1H6F3	6.02e-57	59.28	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Cp4.1LG01g17830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	3.1e-19	34.69	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	1.1e-16	32.24	pathogenesis-related gene 1	[more]
AT2G14580.1	9.2e-16	30.19	basic pathogenesis-related protein 1	[more]
AT2G19990.1	2.0e-15	33.57	pathogenesis-related protein-1-like	[more]
AT1G50060.1	2.7e-15	33.56	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..99 e-value: 7.8E-8 score: 23.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..65 e-value: 2.6E-4 score: 21.8
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 78..108 e-value: 6.0E-6 score: 28.4 coord: 22..77 e-value: 9.6E-10 score: 40.7
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 27..104
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 25..77
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 78..105
None	No IPR available	PANTHER	PTHR10334:SF483	BASIC FORM OF PATHOGENESIS-RELATED PROTEIN 1	coord: 25..77
None	No IPR available	PANTHER	PTHR10334:SF483	BASIC FORM OF PATHOGENESIS-RELATED PROTEIN 1	coord: 78..105
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 86..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17830.1	Cp4.1LG01g17830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region