Cp4.1LG01g17780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g17780
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionbasic form of pathogenesis-related protein 1-like
LocationCp4.1LG01: 13957837 .. 13958130 (+)
RNA-Seq ExpressionCp4.1LG01g17780
SyntenyCp4.1LG01g17780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCACTCAACCGGGCCGTACGGAGAAAACATAGCCGCTGGGTACTACCCTAAGTTCACCGGGGCGGATGTGGTGAAGCTGTGGGTGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTCCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTATTTGCATTTACGATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

mRNA sequence

ATGATTCACTCAACCGGGCCGTACGGAGAAAACATAGCCGCTGGGTACTACCCTAAGTTCACCGGGGCGGATGTGGTGAAGCTGTGGGTGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTCCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTATTTGCATTTACGATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

Coding sequence (CDS)

ATGATTCACTCAACCGGGCCGTACGGAGAAAACATAGCCGCTGGGTACTACCCTAAGTTCACCGGGGCGGATGTGGTGAAGCTGTGGGTGAACGAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTCCGGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTATTTGCATTTACGATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

Protein sequence

MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV
Homology
[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.0e-31
Identity = 57/92 (61.96%), Postives = 70/92 (76.09%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHS GPYGEN+AA  +P+   A  VK+WV+EK  YD+ SN CVGG CGHYTQ+VWR+SV
Sbjct: 69  MIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSV 128

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPY 93
           RLGCARV       F+ C YDPPGN+IG++P+
Sbjct: 129 RLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.1e-28
Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGE-CGHYTQMVWRSS 60
           ++HS G YGEN+A G     T A  V++WV+EK  YDH SN C  G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLGCARVPCKANSQFVICIYDPPGNYIGEKPY 93
           VR+GCARV C      V C YDPPGNY GE PY
Sbjct: 136 VRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-27
Identity = 53/93 (56.99%), Postives = 64/93 (68.82%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGE-CGHYTQMVWRSS 60
           ++HS G YGEN+A G     T A  V++WV+EK  YDH SN C  G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLGCARVPCKANSQFVICIYDPPGNYIGEKPY 93
           VR+GCARV C      V C YDPPGN IG+ PY
Sbjct: 136 VRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.5e-27
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGE-CGHYTQMVWRSS 60
           MIHS GPYGEN+AA  +P+   A  VK+W +EK  YD+ SN C  G+ CGHYTQ+VWR S
Sbjct: 67  MIHSDGPYGENLAAA-FPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKS 126

Query: 61  VRLGCARVPCKANSQFVICIYDPPGNYI 88
           VRLGCARV C +   F+ C YDPPGNYI
Sbjct: 127 VRLGCARVRCNSGWVFITCNYDPPGNYI 153

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 4.6e-27
Identity = 53/93 (56.99%), Postives = 63/93 (67.74%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGE-CGHYTQMVWRSS 60
           ++HS G YGEN+A G     T A  V++WVNEK  Y H SN C  G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLGCARVPCKANSQFVICIYDPPGNYIGEKPY 93
           VR+GCARV C      V C YDPPGN IG+ PY
Sbjct: 136 VRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]
BLAST of Cp4.1LG01g17780 vs. NCBI nr
Match: XP_022958778.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 212 bits (539), Expect = 4.49e-69
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENI AGYYP+FTGAD VKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 24  MIHSTGPYGENIVAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 83

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCARVPCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 84  RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 120

[Close]
BLAST of Cp4.1LG01g17780 vs. NCBI nr
Match: XP_022958894.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 213 bits (542), Expect = 7.33e-69
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENIAAGYYP+FTGAD VKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCAR+PCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 131 RLGCARIPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of Cp4.1LG01g17780 vs. NCBI nr
Match: XP_022958926.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 213 bits (543), Expect = 1.42e-68
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENIAAGYYP+FTGAD VKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 102 MIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 161

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCARVPCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 162 RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 198

[Close]
BLAST of Cp4.1LG01g17780 vs. NCBI nr
Match: XP_022971801.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022971802.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974677.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974684.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022974688.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975326.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_022975679.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 212 bits (539), Expect = 2.10e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENIAAGYYP+FTGAD VKLW NEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCARVPCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 131 RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of Cp4.1LG01g17780 vs. NCBI nr
Match: XP_022974692.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 212 bits (539), Expect = 2.10e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENIAAGYYP+FTGAD VKLW NEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCARVPCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 131 RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy TrEMBL
Match: A0A6J1H414 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459946 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 2.17e-69
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENI AGYYP+FTGAD VKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 24  MIHSTGPYGENIVAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 83

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCARVPCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 84  RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 120

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy TrEMBL
Match: A0A6J1H6F3 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460042 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 3.55e-69
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENIAAGYYP+FTGAD VKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCAR+PCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 131 RLGCARIPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy TrEMBL
Match: A0A6J1H3H8 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460070 PE=4 SV=1)

HSP 1 Score: 213 bits (543), Expect = 6.88e-69
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENIAAGYYP+FTGAD VKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 102 MIHSTGPYGENIAAGYYPEFTGADAVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 161

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCARVPCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 162 RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 198

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy TrEMBL
Match: A0A6J1I475 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470480 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 1.02e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENIAAGYYP+FTGAD VKLW NEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCARVPCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 131 RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of Cp4.1LG01g17780 vs. ExPASy TrEMBL
Match: A0A6J1IAY2 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111473383 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 1.02e-68
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           MIHSTGPYGENIAAGYYP+FTGAD VKLW NEKPLYDHASNKCVGGECGHYTQMVWRSSV
Sbjct: 71  MIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSV 130

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPYDSWVV 97
           RLGCARVPCKANSQFV+C YDPPGNYIGEKPYDSWVV
Sbjct: 131 RLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVV 167

[Close]
BLAST of Cp4.1LG01g17780 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 5.0e-29
Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGG-ECGHYTQMVWRSS 60
           ++HS GPYGEN+A G    F+    VKLWV+EKP Y +A N C GG +C HYTQ+VWR S
Sbjct: 69  LVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDS 128

Query: 61  VRLGCARVPCKANSQFVICIYDPPGNYIGEKPY 93
           V++GCARV C     FV C Y+ PGN++GE PY
Sbjct: 129 VKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]
BLAST of Cp4.1LG01g17780 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 4.2e-28
Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKC---VGGECGHYTQMVWR 60
           ++HS GP+GENIA     + +  D  ++W+NEK  YD+ SN C    GG C HYTQ+VW+
Sbjct: 68  LVHSNGPFGENIAMS-SGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWK 127

Query: 61  SSVRLGCARVPCKANSQFVICIYDPPGNYIGEKPY 93
           ++VRLGCA+V C +   F+ C YDPPGNYIGEKP+
Sbjct: 128 NTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]
BLAST of Cp4.1LG01g17780 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 119.4 bits (298), Expect = 1.6e-27
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVG-GECGHYTQMVWRSS 60
           M HS GP+GEN+AAG +   +G    + W+ EK  YD+ SN C G G CGHYTQ+VWR S
Sbjct: 84  MKHSLGPFGENLAAG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDS 143

Query: 61  VRLGCARVPCKANSQ-FVICIYDPPGNYIGEKPY 93
           VRLGCA V CK +   +VIC YDPPGNYIG++PY
Sbjct: 144 VRLGCASVRCKNDEYIWVICSYDPPGNYIGQRPY 176

[Close]
BLAST of Cp4.1LG01g17780 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 117.1 bits (292), Expect = 8.0e-27
Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 0 

Query: 1   MIHSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSV 60
           +IHS GPYGEN+A G     +G   V +WV+EK  Y++A+N C  G CGHYTQ+VWR SV
Sbjct: 72  LIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKSV 131

Query: 61  RLGCARVPCKANSQFVICIYDPPGNYIGEKPY 93
           RLGCA+V C      + C YDP GNY+ EKPY
Sbjct: 132 RLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]
BLAST of Cp4.1LG01g17780 vs. TAIR 10
Match: AT4G33730.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 8.0e-27
Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = 0 

Query: 3   HSTGPYGENIAAGYYPKFTGADVVKLWVNEKPLYDHASNKCVGGECGHYTQMVWRSSVRL 62
           HS+GPYGEN+A G     + A  V +WV+EK  YD  SN C G  CGHYTQ+VWR S RL
Sbjct: 84  HSSGPYGENLAFG-SGDMSAAQAVAMWVHEKSYYDFYSNSCHGPACGHYTQVVWRGSARL 143

Query: 63  GCARVPCKANSQFVICIYDPPGNYIGEKPY 93
           GC +  C   +  V+C YDP GNYIG +PY
Sbjct: 144 GCGKAKCNNGASIVVCNYDPAGNYIGARPY 172

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17780 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P116704.0e-3161.96Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S... [more]
P082994.1e-2858.06Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1[more]
P070531.2e-2756.99Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
Q086973.5e-2761.36Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P090424.6e-2756.99Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3[more]
BLAST of Cp4.1LG01g17780 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022958778.14.49e-6994.85basic form of pathogenesis-related protein 1-like [Cucurbita moschata][more]
XP_022958894.17.33e-6994.85basic form of pathogenesis-related protein 1-like [Cucurbita moschata][more]
XP_022958926.11.42e-6895.88basic form of pathogenesis-related protein 1-like [Cucurbita moschata][more]
XP_022971801.12.10e-6894.85basic form of pathogenesis-related protein 1-like [Cucurbita maxima] >XP_0229718... [more]
XP_022974692.12.10e-6894.85basic form of pathogenesis-related protein 1-like [Cucurbita maxima][more]
BLAST of Cp4.1LG01g17780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H4142.17e-6994.85basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1H6F33.55e-6994.85basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1H3H86.88e-6995.88basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1I4751.02e-6894.85basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1IAY21.02e-6894.85basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN... [more]
BLAST of Cp4.1LG01g17780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50060.15.0e-2955.91CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT3G19690.14.2e-2852.63CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G19990.11.6e-2758.51pathogenesis-related protein-1-like [more]
AT2G14610.18.0e-2755.43pathogenesis-related gene 1 [more]
AT4G33730.18.0e-2754.44CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002413Venom allergen 5-likePRINTSPR00838V5ALLERGENcoord: 47..66
score: 49.69
coord: 23..38
score: 30.47
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 25..38
score: 36.47
coord: 48..64
score: 63.28
coord: 75..88
score: 50.9
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 1..92
IPR014044CAP domainSMARTSM00198SCP_3coord: 1..88
e-value: 1.3E-13
score: 61.2
IPR014044CAP domainPFAMPF00188CAPcoord: 7..80
e-value: 1.1E-14
score: 55.3
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 1..97
e-value: 2.5E-29
score: 104.3
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 2..93
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 1..92
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 49..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17780.1Cp4.1LG01g17780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane