Cp4.1LG01g17690 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
|
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACCAAATTCTTCTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGTATGGTGGTGGAGACTAGAGTGTTGACATGGAGGAGGGTGTTCAAGTCTCTCCAGGCTTTGGCAGCCCATGGTTTTCTTTTGTCCTTCACGCTTACGCTTGCTCTCAAGCTCGACCATCTCGTCTCTTACTCTTGGTGGTTCGTACCTCTCTCAATTCCTTANTTAAATTGTCATAAATAGTAAATAGTTATGTAGAGTAAAAATCTATATCCGTTAAATTTATATATGGGTAGTGTTAGATAGTAGATGATTATATATAGTAAAACTAAATGTAGTAAAATGAACCATATATATTATTTGAAATTATCTATTCTCTAGTACATCCATGAAGTAATCAACACAAAATCTTTAAATATTCCTCTCTCATTTTCTCTCTCTTATTTTTTGTGTTCATCTAGATCGAGTGTGTGCGTTGTTGTGCGATCCTAACATTGAGGCGCTACCTCATAAAATTCTCTCTTTGGTGGGGATAACATAGTGTATACTAGCCTTCTCTTGTCATCCTTGGGAGGTTAGTTGGTGAACCCTTCTTATAGGTCCATCAAGTCACACAAGGTCAGGGGAGTGACCCTCTTGTGTTTGTCAACTACTAAGATTACCCGTGTAATCCCATGTCTTCTCTCAAGACGAATTTATTGTGCAAGGTAATCCAATTGAACTGTCGGTCACACAACCCTAACCAACCTAGGCTTGGCTTGACAATACATCTTCACACCTGCGCAGAAACCTAGAATTCATCGCAATTTTTCAGATTCTTTCCATTTTTTTTTTTAATTTTCATATCTTTCTTGAAGTAACTCGAATCAACTTGGTTCTTTTACTAAAGTTTTATAAACCAAATTCTTCTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGTATGGTGGTGGAGACTAGAGTGTTGACATGGAGGAGGGTGTTCAAGTCTCTCCAGGCTTTGGCAGCCCATGGTTTTCTTTTGTCCTTCACGCTTACGCTTGCTCTCAAGCTCGACCATCTCGTCTCTTACTCTTGGTGTAACTCGAATCAACTTGGTTCTTTTACTAAAGTTTTATAA ACCAAATTCTTCTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGTATGGTGGTGGAGACTAGAGTGTTGACATGGAGGAGGGTGTTCAAGTCTCTCCAGGCTTTGGCAGCCCATGGTTTTCTTTTGTCCTTCACGCTTACGCTTGCTCTCAAGCTCGACCATCTCGTCTCTTACTCTTGGTGTAACTCGAATCAACTTGGTTCTTTTACTAAAGTTTTATAA TKFFFLFLLLLLLLLLLLLLLLLLLLLLGMVVETRVLTWRRVFKSLQALAAHGFLLSFTLTLALKLDHLVSYSWCNSNQLGSFTKVL Homology
BLAST of Cp4.1LG01g17690 vs. NCBI nr
Match: XP_023515362.1 (uncharacterized protein LOC111779463 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515363.1 uncharacterized protein LOC111779463 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 86.7 bits (213), Expect = 1.63e-17 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. NCBI nr
Match: XP_022930119.1 (uncharacterized protein LOC111436604 [Cucurbita moschata]) HSP 1 Score: 86.7 bits (213), Expect = 1.63e-17 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. NCBI nr
Match: KAG6601754.1 (Kinesin-like protein KIN-7D, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032478.1 Kinesin-like protein KIN-7D, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 86.7 bits (213), Expect = 1.63e-17 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. NCBI nr
Match: XP_022973618.1 (uncharacterized protein LOC111472200 [Cucurbita maxima]) HSP 1 Score: 85.1 bits (209), Expect = 5.79e-17 Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. NCBI nr
Match: XP_022157058.1 (uncharacterized protein LOC111023869 isoform X3 [Momordica charantia]) HSP 1 Score: 75.5 bits (184), Expect = 1.28e-13 Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. ExPASy TrEMBL
Match: A0A6J1EQP2 (uncharacterized protein LOC111436604 OS=Cucurbita moschata OX=3662 GN=LOC111436604 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.92e-18 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. ExPASy TrEMBL
Match: A0A6J1IDN8 (uncharacterized protein LOC111472200 OS=Cucurbita maxima OX=3661 GN=LOC111472200 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.80e-17 Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. ExPASy TrEMBL
Match: A0A6J1DSE2 (uncharacterized protein LOC111023869 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023869 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.21e-14 Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. ExPASy TrEMBL
Match: A0A6J1DTJ9 (uncharacterized protein LOC111023869 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023869 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.28e-14 Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. ExPASy TrEMBL
Match: A0A6J1DWU2 (uncharacterized protein LOC111023869 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023869 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.28e-14 Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. TAIR 10
Match: AT1G68820.1 (Transmembrane Fragile-X-F-associated protein ) HSP 1 Score: 62.4 bits (150), Expect = 2.1e-10 Identity = 30/45 (66.67%), Postives = 38/45 (84.44%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. TAIR 10
Match: AT1G18470.1 (Transmembrane Fragile-X-F-associated protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. TAIR 10
Match: AT1G18470.2 (Transmembrane Fragile-X-F-associated protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
BLAST of Cp4.1LG01g17690 vs. TAIR 10
Match: AT1G73950.1 (Transmembrane Fragile-X-F-associated protein ) HSP 1 Score: 48.5 bits (114), Expect = 3.1e-06 Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|