Cp4.1LG01g17660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17660
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	V-type proton ATPase subunit F
Location	Cp4.1LG01: 13285371 .. 13290058 (-)
RNA-Seq Expression	Cp4.1LG01g17660
Synteny	Cp4.1LG01g17660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTCGGTTTAGTATTCAGTCCAGCCAAAACCGGATCGAATCAGAACGTACACCCGTCGGTGTTGGATGGAAGAGAATTGTCTTGATTGCCTGCATTCGAATTTCGGATCTTGGAAAGCTCCGTGTCCGACGAACAAAATTCCTCCGATCACAAATTCGGCTTCTAGGTATTTACACTGATCCATTTCACCTCACCCTCCTTTTTGTCGCCGGATCTCGATTCCTAGCTTCAATCCCTTCTCTTCTACTCCTGATTTTCACTAACAAACTTTGAATTTCACTGCTACCCTAAACCCCATTGTTCGATTTCTGAGTTGTAAATTCTCAATCTCATGGCTTTCAGTTTCGTTCCCTTGTTTTTTTTTTTTTTTCATTTTTTTCTTTTGCTTCTGCCTATCTCGCTGTGAATTGGAGATTTGACCCCAGTTGGGATAACACTCCCCGCCCCTGATCCCGCTTAATTTTATGCGGATTTTCTGTTCGAACTTTTCATTTCTGGTTCAAATATTTTTCGTGTTTTGTTAATTAAGATTTGCAGTATAATTGTTTATAATTCTTTTCGTAGCTACATCTCGTAAATGGCTGGAAAAGCTCAAATCCCCACCAAAAACTCAGCGCTTATTTCTATGATTGCTGATGAGGTACGCCCAATACATTTCCATATTGCAACAGCTTTTCTTTCTGGGTACCTTAAACTATTAAATTGACTCGAATTTCACTAGGAGTCAATATTCCGTACTTATTTGATCCTATTGATATGTGATTTTGGTGTTTGGTTTTCTTTTTACAGATAAACATGTGATCTTATTTTGTGTCGTATGTGGTTCAAGTACCTTGCAAACCCGAATCTTAATAGGGTTCTACTTGTATGTGTGTCAAAGCAAATCTGCTAGTTAATCACGTTTACATAAGTAGTTAGTCTTGAACCCAACAGTAAAATCTTCAGTAGTTTTTCTATGAAACTGTCAACTTTGATAGATAAACATCCATTATTCAATTTTTCTTCTTCTGGAATTTTATGTTTATTCTTCAGTTAATTGCAAATTTGAAGGAAAAATAAAGCATCTGGATAATATTATTAAAAAAAAAAAAAAAAAAAAAAACATCTACATAATGATAATGATTGGGCTCCAGCTTATTCTGTTGTGTTTTGTATCTTGAACTATGCATGGATTTTGGTTATACGTTTAATCTGAAATTTCTTTATAATAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCTAGTAAGTATCCCTCTGATGCAAATATCTTGCAACTCTGATTTTCCATTTCGCTTGTAGCTTTGGCATCCTATTTTGTTAGGCTCACACTTCGTGTCTAAATCGTGTGAAACTTGCTGAAATCCTTGTTATTTAAGATAGTCCATTTTGAACGTTAGCTTTTCACAAAAATTCCCAGTGATATATATGATATTCTAAATTAGCTCCAAAACTTGTAGTATTCCACTTTGAAACTTAGTTTTGACACATTTAAGGATTTGGTCTAAACCAAGATGAAAATTTGTTTTCCCTCCAATTTATGTTTTATCATTGCAGACTTTCCTGAAAAAATCATCAGAGCTAAGATAGAATTTGGTAAACAGCGAATACTTTCCCCTAAGTAGTAATTTTGTTTCCCAATTTGACCTATAAGAATATTAAATGGCTATAACAAATCTGTGTGTAAAATCAAATTAACAAAATATGGTTATATTTTATTATTAAGTCGAGTGTCTCAATTTTTGTTCATGATAGAATTTTGTTATTATGATATAAAAATTGTGGTCAGGTGGGATACTAAACTGTGATTGAAGTAGTTGTGATAAGTCAATCCTAATCCTCAGCCCAACGATCCAAGCTTTTGTTGAAGTTAGACTCTTGAATCAAAGAAATTAATACCTTCTTATACAAAATTCGGATCAACCAAGAAACAAAAATCGAATTAGATTACCTCTTAAGATCAAAAATCTAGATGCAAGATTTGAAACTTTGCCCTAAATTGAGTCGTTCCACCATGGAATTTGATCAAGACTTGATTGAATGACTTGAATACAATCTACCATAAGAATGACTTGAAATCTTAGAAATGGCAAGAATGATGCTCAAATTTTTTAGGGTGAAAGTCTCAATTTGAGAGTTCATTCATTTATAATCTCATAAGCTTGTTTTTACATGCCATTTTGTGGGTATTTATAGCCTCTCCACAAAAGAAACCCCCATCCTTCACATAGCCGCTAAAAGAAGTGAGTGAAGTTCTTCCTTCTACCCTTCAAATGCCCACTAAAAAGAGTTATGAAATTAAAATAATAAATAAAGTCTACAAGGAAATTATTGATCAAGTGCTATTTAAGATAACCCTAACCTTGCAAATCTTAACTTCCAAAGCTCCAAATGGTCTCGTAGATGAAGAAGGAACACTTATTGAATCTTCTTGGCCTTGGATCGTAGGTCCAGTTGAAGCTTGTTGAATACCATGCTCAGTCCCTTGATATAATAAATAAGATAATTTGATGACATAGCTTCTTTCATTTTTCATGTTTATGACATAGCTTCTACATTTTCATGTCCTGGGCTGCTATAGATATGTACATTAGCATTGGCAATGTTTAATTTTTTTAGTTAAAAATTTATTTGAAAAATAATTATTCACTGAGTAGGCCAAAAGATTAAAGGGACAAACTATCAAGAGGTTTTGGTTTATTATTATTATTGTTTAATTATCATCATCTCCATTCATTTAGATTTAAAAAAATAATAATAATTAATTGAAAGGACCTTTTGTGTTTCTTTTTTTTGGGTTTCTGAGATGGTGTCTCCTCTATGCAATAAAGATCTAGAGTCGGAAGTTCATCTCTGCCTTCATTGCTCCTATGCTGAAAGTTTTTGGAATTATGTTCTTTCCACGTTCAATTGGTTGTGGTCCACCCTTGGACATCAACATTCTATTACCAACAATTTTGGTAAAGAAGGGCCTTTGGCTTCAATTCACTAATGTTTTCTGGATTTTATGGCTTGAAAGGAATGATAGAATCTTCATCAATAAAGAGAAGTCCTTAGATCATTTCTTAAATTCTCTATCATTTGCGACACTTTCTTTATGTGAACTTATTTCTCCTTTTCCCCATTGGAAATAAATGTTTGCAGTCTTCTTTGGCTAGGGACGTCGCTTTCCTTTTTTATTTTATATTTTATTTTATTTATTTATTTTGTAATACCATACCTTCTTGTTTCTTATTTAAAAGAAAAAAATGTTCTGCATGAGATATGTGTGTGTGTGATCTAGAATCCAGATTGACCGGCCTAGCACTGGAATTTAGCTCGCATTATACAAAGACCTGCAGTAGTAAATCATCTTTTTGTAGTATGGATAGCTGTTTTTAATATTTGCAAATGAAGTGTATTTAAAATGTTTTCATGTGTTATTGTACTGATGTCTCTAAGACAACTTTTGGTTTGATGCCACGTCGTTGATAGCTAAATAGCAGTGACCGATGGTGCTGTGATTAAACCAAAAACAAAAATTTCACTACTTGATAGGAATCTGTTCATCTTATTCCATGGGTTTACAGAGCCATTTTGTGTGATGATAGTGTTTTCCATTTATCAAATATGCACTTTGACTTGTCTTTCTATCCTCTTCTTATGTCTCTAAAGTTTAACTCTTAACGTCTTAGAGACAACTGTCAAACAAATTGAAGATGCTTTCAAAGAGTTTACAACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTAAGTTGTTTTCTGAATTCCCTTTCTATCCAATGTAAGTATGACTTGTTTTATTGTGACTAAAAGTTTGAGAGTGATTTTGGAATGGTCAAAACCACTTTTGTCACGCCCAAAATCACATGACAAAAGTGATTTTGGTCTAAAATTACTCCTAACACTTCGTTATTGGTTGACTAGTTGCCTTTTCCTTGAACAAAAAATCCTATGAAACCCCTCCCTCCTGTTTTATGGATTAATGTCTATTTGGTGTTCCTATATGTTTACACCTTTCTATTCCTCTGTGGCCATTAGGAACATCTGCTTTGGTTTAAGTTTTCAATATTTGTTTCATCAAACTGAAACAAATTTTTTTTATTTTTTATTTCAGGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCGATATTGGAGATTCCTTCCAAGGATCACCCATATGACCCGGCACACGATTCAATTCTTTCCCGAGTAAAGAATCTGTTTTCTACTGAATCGGTGGCATCTGGGAGGCGTTAAAAAGATATTCCAAGTCATCTTCCTTTCTTCAAACATGCTGCACTTGGTTGGTGTTCCCCGCTTTCTTCTGCAGTAGAATTTCATATTTTGTAATGATTCTATTCATATTTTGATCACTTGAATAAAACTTGAAGAAACATGGAGCTAGAGGAGCTCCTCGTGGGTATCCAAGCAACCCCATTGTTTTTCTTGTACCTTATTCCGTACATTTAAAACTGCAACCTAGAGGCATTACATCTACATATATCTAAAACCATTTGCCTCCGTATTTTTTTTGGCGTTTAAATCCAGTCCATCTCACAGTTTCATATTATATAATATTCCACGACTGTGGCAAGGGTATTTTTAC

mRNA sequence

CAGGTCGGTTTAGTATTCAGTCCAGCCAAAACCGGATCGAATCAGAACGTACACCCGTCGGTGTTGGATGGAAGAGAATTGTCTTGATTGCCTGCATTCGAATTTCGGATCTTGGAAAGCTCCGTGTCCGACGAACAAAATTCCTCCGATCACAAATTCGGCTTCTAGCTACATCTCGTAAATGGCTGGAAAAGCTCAAATCCCCACCAAAAACTCAGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCTAAGACAACTGTCAAACAAATTGAAGATGCTTTCAAAGAGTTTACAACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCGATATTGGAGATTCCTTCCAAGGATCACCCATATGACCCGGCACACGATTCAATTCTTTCCCGAGTAAAGAATCTGTTTTCTACTGAATCGGTGGCATCTGGGAGGCGTTAAAAAGATATTCCAAGTCATCTTCCTTTCTTCAAACATGCTGCACTTGGTTGGTGTTCCCCGCTTTCTTCTGCAGTAGAATTTCATATTTTGTAATGATTCTATTCATATTTTGATCACTTGAATAAAACTTGAAGAAACATGGAGCTAGAGGAGCTCCTCGTGGGTATCCAAGCAACCCCATTGTTTTTCTTGTACCTTATTCCGTACATTTAAAACTGCAACCTAGAGGCATTACATCTACATATATCTAAAACCATTTGCCTCCGTATTTTTTTTGGCGTTTAAATCCAGTCCATCTCACAGTTTCATATTATATAATATTCCACGACTGTGGCAAGGGTATTTTTAC

Coding sequence (CDS)

ATGGCTGGAAAAGCTCAAATCCCCACCAAAAACTCAGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCTAAGACAACTGTCAAACAAATTGAAGATGCTTTCAAAGAGTTTACAACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCGATATTGGAGATTCCTTCCAAGGATCACCCATATGACCCGGCACACGATTCAATTCTTTCCCGAGTAAAGAATCTGTTTTCTACTGAATCGGTGGCATCTGGGAGGCGTTAA

Protein sequence

MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR

Homology

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BLAST of Cp4.1LG01g17660 vs. ExPASy Swiss-Prot
Match: Q9ZQX4 (V-type proton ATPase subunit F OS=Arabidopsis thaliana OX=3702 GN=VHA-F PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.6e-57
Identity = 106/126 (84.13%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAG+A IP +NSALI+MIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTTV+QIEDAFK
Sbjct: 1   MAGRATIPARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EF+ R+DIAI+++SQY+ANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LF
Sbjct: 61  EFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVA 127
           S ESV+
Sbjct: 121 SAESVS 126

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BLAST of Cp4.1LG01g17660 vs. ExPASy Swiss-Prot
Match: Q23680 (Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans OX=6239 GN=vha-9 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.3e-32
Identity = 64/110 (58.18%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 14  LISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMI 73
           ++++I DEDTVVGFLL GVG ++  RK NYLIVD +TTV++IE+AF  F  R+DIAI++I
Sbjct: 9   ILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDIAIILI 68

Query: 74  SQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTE 124
           +Q++A MIR+ VD++ + IPA+LEIPSK+ PYDP+ DSIL+R + LF+ E
Sbjct: 69  NQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPE 118

[Close]

BLAST of Cp4.1LG01g17660 vs. ExPASy Swiss-Prot
Match: Q55AH5 (V-type proton ATPase subunit F OS=Dictyostelium discoideum OX=44689 GN=vatF PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.3e-32
Identity = 65/112 (58.04%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 12  SALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIV 71
           +AL+++I DED V GFLLAGVG  D ++  N+L+VDSKT+  +IE AFK FTTR DIAI+
Sbjct: 9   TALVAVIGDEDVVTGFLLAGVGQKDKKKNENFLVVDSKTSQAKIETAFKSFTTRNDIAII 68

Query: 72  MISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTE 124
           MI+Q VA+ IR+L+D Y++ IP ILEIPSKDHPYDP  DS++ +VK +  ++
Sbjct: 69  MITQKVADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKDSVMLKVKKMTGSD 120

[Close]

BLAST of Cp4.1LG01g17660 vs. ExPASy Swiss-Prot
Match: Q17029 (V-type proton ATPase subunit F OS=Anopheles gambiae OX=7165 GN=Vha14 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-30
Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 0


Query: 5   AQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTT 64
           A +      LIS+I DEDT VGFLL GVG ++  R  N+++VD  T V +IED FK F  
Sbjct: 2   ALLSAMKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSEIEDCFKRFIK 61

Query: 65  REDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTES 124
           R+DI I++I+Q  A +IR ++DS+  P PA+LEIPSKDHPYD + DSIL R K +F+ E 
Sbjct: 62  RDDIDIILINQNYAELIRHVIDSHTAPTPAVLEIPSKDHPYDASKDSILRRAKGMFNPED 121

Query: 125 VASGR 130
           + + R
Sbjct: 122 MIANR 126

[Close]

BLAST of Cp4.1LG01g17660 vs. ExPASy Swiss-Prot
Match: Q9D1K2 (V-type proton ATPase subunit F OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-30
Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 14  LISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMI 73
           LI++I DEDTV GFLL G+G ++  R  N+L+V+  TT+ +IED F++F  R+DI I++I
Sbjct: 7   LIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILI 66

Query: 74  SQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESV 126
           +QY+A M+R  +D++ + IPA+LEIPSK+HPYD A DSIL R K +F+ E +
Sbjct: 67  NQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118

[Close]

BLAST of Cp4.1LG01g17660 vs. NCBI nr
Match: XP_022930111.1 (V-type proton ATPase subunit F isoform X2 [Cucurbita moschata] >XP_022930112.1 V-type proton ATPase subunit F isoform X2 [Cucurbita moschata] >XP_022961522.1 V-type proton ATPase subunit F [Cucurbita moschata] >XP_022968815.1 V-type proton ATPase subunit F [Cucurbita maxima] >XP_022973615.1 V-type proton ATPase subunit F isoform X1 [Cucurbita maxima] >XP_022973616.1 V-type proton ATPase subunit F isoform X1 [Cucurbita maxima] >XP_023522885.1 V-type proton ATPase subunit F [Cucurbita pepo subsp. pepo] >XP_023553409.1 V-type proton ATPase subunit F isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553415.1 V-type proton ATPase subunit F isoform X1 [Cucurbita pepo subsp. pepo] >KAG7023981.1 V-type proton ATPase subunit F [Cucurbita argyrosperma subsp. argyrosperma] >KAG7032475.1 V-type proton ATPase subunit F, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 252 bits (643), Expect = 3.35e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120

Query: 121 STESVASGRR 130
           STESVASGRR
Sbjct: 121 STESVASGRR 130

[Close]

BLAST of Cp4.1LG01g17660 vs. NCBI nr
Match: XP_038879624.1 (V-type proton ATPase subunit F [Benincasa hispida])

HSP 1 Score: 251 bits (642), Expect = 4.76e-84
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGRR 130
           STESVASGRR
Sbjct: 121 STESVASGRR 130

[Close]

BLAST of Cp4.1LG01g17660 vs. NCBI nr
Match: KAG6590444.1 (V-type proton ATPase subunit F, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 252 bits (643), Expect = 7.26e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 24  MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 83

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF
Sbjct: 84  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 143

Query: 121 STESVASGRR 130
           STESVASGRR
Sbjct: 144 STESVASGRR 153

[Close]

BLAST of Cp4.1LG01g17660 vs. NCBI nr
Match: XP_004151178.1 (V-type proton ATPase subunit F [Cucumis sativus] >XP_008450453.1 PREDICTED: V-type proton ATPase subunit F [Cucumis melo] >XP_008450454.1 PREDICTED: V-type proton ATPase subunit F [Cucumis melo] >XP_011660114.1 V-type proton ATPase subunit F [Cucumis sativus] >KAA0040144.1 V-type proton ATPase subunit F-like [Cucumis melo var. makuwa] >KGN66455.1 hypothetical protein Csa_007359 [Cucumis sativus] >TYK27648.1 V-type proton ATPase subunit F-like [Cucumis melo var. makuwa])

HSP 1 Score: 249 bits (637), Expect = 2.76e-83
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGR 129
           STESVASGR
Sbjct: 121 STESVASGR 129

[Close]

BLAST of Cp4.1LG01g17660 vs. NCBI nr
Match: XP_022150945.1 (V-type proton ATPase subunit F [Momordica charantia])

HSP 1 Score: 248 bits (633), Expect = 1.12e-82
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTK+SALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKSSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120

Query: 121 STESVASGRR 130
           S ESVASGRR
Sbjct: 121 SAESVASGRR 130

[Close]

BLAST of Cp4.1LG01g17660 vs. ExPASy TrEMBL
Match: A0A6J1HY93 (V-type proton ATPase subunit F OS=Cucurbita maxima OX=3661 GN=LOC111467938 PE=3 SV=1)

HSP 1 Score: 252 bits (643), Expect = 1.62e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120

Query: 121 STESVASGRR 130
           STESVASGRR
Sbjct: 121 STESVASGRR 130

[Close]

BLAST of Cp4.1LG01g17660 vs. ExPASy TrEMBL
Match: A0A6J1EPG5 (V-type proton ATPase subunit F OS=Cucurbita moschata OX=3662 GN=LOC111436591 PE=3 SV=1)

HSP 1 Score: 252 bits (643), Expect = 1.62e-84
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120

Query: 121 STESVASGRR 130
           STESVASGRR
Sbjct: 121 STESVASGRR 130

[Close]

BLAST of Cp4.1LG01g17660 vs. ExPASy TrEMBL
Match: A0A1S3BQ97 (V-type proton ATPase subunit F OS=Cucumis melo OX=3656 GN=LOC103492049 PE=3 SV=1)

HSP 1 Score: 249 bits (637), Expect = 1.33e-83
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGR 129
           STESVASGR
Sbjct: 121 STESVASGR 129

[Close]

BLAST of Cp4.1LG01g17660 vs. ExPASy TrEMBL
Match: A0A5A7T9J8 (V-type proton ATPase subunit F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold93G00020 PE=3 SV=1)

HSP 1 Score: 249 bits (637), Expect = 1.33e-83
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGR 129
           STESVASGR
Sbjct: 121 STESVASGR 129

[Close]

BLAST of Cp4.1LG01g17660 vs. ExPASy TrEMBL
Match: A0A0A0LX69 (V-type proton ATPase subunit F OS=Cucumis sativus OX=3659 GN=Csa_1G611810 PE=3 SV=1)

HSP 1 Score: 249 bits (637), Expect = 1.33e-83
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDS+LSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGR 129
           STESVASGR
Sbjct: 121 STESVASGR 129

[Close]

BLAST of Cp4.1LG01g17660 vs. TAIR 10
Match: AT4G02620.1 (vacuolar ATPase subunit F family protein )

HSP 1 Score: 220.7 bits (561), Expect = 6.9e-58
Identity = 106/126 (84.13%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAG+A IP +NSALI+MIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTTV+QIEDAFK
Sbjct: 1   MAGRATIPARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLF 120
           EF+ R+DIAI+++SQY+ANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDS+LSRVK LF
Sbjct: 61  EFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVA 127
           S ESV+
Sbjct: 121 SAESVS 126

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQX4	9.6e-57	84.13	V-type proton ATPase subunit F OS=Arabidopsis thaliana OX=3702 GN=VHA-F PE=2 SV=...	[more]
Q23680	6.3e-32	58.18	Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans OX=6239 GN=vha...	[more]
Q55AH5	6.3e-32	58.04	V-type proton ATPase subunit F OS=Dictyostelium discoideum OX=44689 GN=vatF PE=3...	[more]
Q17029	2.0e-30	50.40	V-type proton ATPase subunit F OS=Anopheles gambiae OX=7165 GN=Vha14 PE=2 SV=2	[more]
Q9D1K2	2.0e-30	51.79	V-type proton ATPase subunit F OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=2	[more]

BLAST of Cp4.1LG01g17660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930111.1	3.35e-84	100.00	V-type proton ATPase subunit F isoform X2 [Cucurbita moschata] >XP_022930112.1 V...	[more]
XP_038879624.1	4.76e-84	99.23	V-type proton ATPase subunit F [Benincasa hispida]	[more]
KAG6590444.1	7.26e-84	100.00	V-type proton ATPase subunit F, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004151178.1	2.76e-83	99.22	V-type proton ATPase subunit F [Cucumis sativus] >XP_008450453.1 PREDICTED: V-ty...	[more]
XP_022150945.1	1.12e-82	98.46	V-type proton ATPase subunit F [Momordica charantia]	[more]

BLAST of Cp4.1LG01g17660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY93	1.62e-84	100.00	V-type proton ATPase subunit F OS=Cucurbita maxima OX=3661 GN=LOC111467938 PE=3 ...	[more]
A0A6J1EPG5	1.62e-84	100.00	V-type proton ATPase subunit F OS=Cucurbita moschata OX=3662 GN=LOC111436591 PE=...	[more]
A0A1S3BQ97	1.33e-83	99.22	V-type proton ATPase subunit F OS=Cucumis melo OX=3656 GN=LOC103492049 PE=3 SV=1	[more]
A0A5A7T9J8	1.33e-83	99.22	V-type proton ATPase subunit F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0LX69	1.33e-83	99.22	V-type proton ATPase subunit F OS=Cucumis sativus OX=3659 GN=Csa_1G611810 PE=3 S...	[more]

BLAST of Cp4.1LG01g17660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02620.1	6.9e-58	84.13	vacuolar ATPase subunit F family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005772	ATPase, V1 complex, subunit F, eukaryotic	TIGRFAM	TIGR01101	TIGR01101	coord: 11..124 e-value: 1.1E-50 score: 169.0
IPR005772	ATPase, V1 complex, subunit F, eukaryotic	PIRSF	PIRSF015945	V-ATP_synth_F	coord: 3..123 e-value: 2.8E-52 score: 173.7
IPR036906	ATPase, V1 complex, subunit F superfamily	GENE3D	3.40.50.10580	ATPase, V1 complex, subunit F	coord: 9..122 e-value: 4.1E-45 score: 154.7
IPR036906	ATPase, V1 complex, subunit F superfamily	SUPERFAMILY	159468	AtpF-like	coord: 15..118
IPR008218	ATPase, V1 complex, subunit F	PFAM	PF01990	ATP-synt_F	coord: 15..116 e-value: 1.2E-29 score: 102.5
None	No IPR available	PANTHER	PTHR13861:SF12	V-TYPE PROTON ATPASE SUBUNIT F	coord: 1..130
None	No IPR available	PANTHER	PTHR13861	VACUOLAR ATP SYNTHASE SUBUNIT F	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17660.1	Cp4.1LG01g17660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0033180	proton-transporting V-type ATPase, V1 domain
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism