Cp4.1LG01g17620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	Cp4.1LG01: 13371389 .. 13372369 (+)
RNA-Seq Expression	Cp4.1LG01g17620
Synteny	Cp4.1LG01g17620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTGCCCCCCCGGAGTACCCTACGACGCCGAATCCCGGAAGCTTCCATCTTCACGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTTCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGATCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGACCAAAGGAATACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAGGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAACCAGGCGGAGTGAAGGCGGTTCAAGTGGTAAAGCTGTTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAGTCAAAGCATTGTAA

mRNA sequence

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTGCCCCCCCGGAGTACCCTACGACGCCGAATCCCGGAAGCTTCCATCTTCACGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTTCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGATCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGACCAAAGGAATACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAGGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAACCAGGCGGAGTGAAGGCGGTTCAAGTGGTAAAGCTGTTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAGTCAAAGCATTGTAA

Coding sequence (CDS)

ATGGACACAACAAGCTCTTTAGACGACAGCGCCGCCAGTGACTCCACCTCCGTCTCTCCCGTCACCCCATTACTCTTCCACTCCTCCTCCTCCTCCTGCCCCCCCGGAGTACCCTACGACGCCGAATCCCGGAAGCTTCCATCTTCACGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGGGCTCAGATTTACGAGAAGCACCAAAGGGTCTGGTTGGGCACATTCAACCACGAACACCAGGCCGCCAAAGCCTACGACATCGCCGCCCTTCGCTTCCGCGGCCGCGACGCTGTCACCAATTTCAAGCCCGGCGCCTTCTCTTCCGTCGACGCCGCCTTCGAGGCTGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACCTACAATGACGAGATCCAGCAAAGCAAGCGATACGGTGGAGGAACGACGACGACGACGACAGCGGCGGCGGCGCACTCTCTCCAGAACGCGGCGTCGGAGTCGGACCGGGAGGTGCTGTTTGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTTCCATTGGGGGAAGGGATGGGTTCGACCAAAGGAATACTCCTGAATTTCGAGGATATGGGAGGGAAGCTGTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACCAAGGGATGGAGCCGGTTCGTAAAGGAGAAAACCCTCAGAGCCGGGGACGTGGTCCGGTTCCTACGCTCGACCGGCCCGGATAAGAAGCTTTACATCGATGGCAAACCAGGCGGAGTGAAGGCGGTTCAAGTGGTAAAGCTGTTTGGAGTGAATATTTTGGAAGTGCCGGTGGGGTGGTGCGGGAAGAGAGACAGAGAAGGCCTGTCGGAATTAGAAAGGACGAAGAAGCAAAGAATAGTCAAAGCATTGTAA

Protein sequence

MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRIVKAL

Homology

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.1e-92
Identity = 190/298 (63.76%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 40  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 99
           +AESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+A  RFR RD
Sbjct: 51  EAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRD 110

Query: 100 AVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSK--RYGGGTTTTTT 159
           AVTNFK           E DFLNSHSK EIVDMLRKHTYN+E++QSK  R G G  T T 
Sbjct: 111 AVTNFKDVKMDE----DEVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTL 170

Query: 160 AAAAHSLQNAASESDR--EVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGI 219
             +  S    ++   R  E LFEK VTPSDVGKLNRLVIPK HAEK+FPL     S KG+
Sbjct: 171 LTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGV 230

Query: 220 LLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI 279
           LLNFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RS G D++LYI
Sbjct: 231 LLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYI 290

Query: 280 DGKP---GGVKAVQVVKLFGVNILEVP-----VGWCGKRDREGLSELERTKKQRIVKA 326
             K      + A +V++LFGVNI         VG     D E LS L  +KKQRI  A
Sbjct: 291 GWKSRSGSDLDAGRVLRLFGVNISPESSRNDVVGNKRVNDTEMLS-LVCSKKQRIFHA 343

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 8.0e-92
Identity = 191/305 (62.62%), Postives = 213/305 (69.84%), Query Frame = 0


Query: 40  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 99
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 100 AVTNFKPGAFSSVDA-AFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTA 159
           AVTNFK    S VD    E+ FL++HSK EIVDMLRKHTY DE +QS+R         + 
Sbjct: 121 AVTNFK----SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSG 180

Query: 160 AAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-------GEGMGS 219
               +  N A    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FPL       G     
Sbjct: 181 LETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSP 240

Query: 220 TKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDK 279
           TKG+L+N ED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTGPD+
Sbjct: 241 TKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDR 300

Query: 280 KLYIDGKPGGVKAVQVVKLFGVNIL--------EVPVGWCG-KRDRE-GLSELERTKKQR 327
           +LYI  K        VV+LFGVNI         +V V   G KR RE  L  L  +KKQ 
Sbjct: 301 QLYIHWKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQA 360

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 9.7e-90
Identity = 193/339 (56.93%), Postives = 227/339 (66.96%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDST-----SVSPVTPLLFHSSSSSC------PPGVPYDAESRKLPSS 60
           MD  SS+D+S+ +  +     S SP + L    S +S          V  +AESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+AA RFRGRDAVTNFK   F
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAAS 180
                  E +FLN+HSK EIVDMLRKHTY +E+ Q KR   G    TTA A  S+     
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 ESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PLGEGMGSTKGILLNFEDMGGKLW 240
               E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  PLG    S KG+LLNFED+ GK+W
Sbjct: 181 FKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW 240

Query: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGG---VKA 300
           RFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++ F RS   D+K +I  K      ++ 
Sbjct: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLET 300

Query: 301 VQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRIV 324
            +V++LFGV+I  +      K   E L    R KKQR++
Sbjct: 301 GRVMRLFGVDI-SLNAVVVVKETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.3e-89
Identity = 191/326 (58.59%), Postives = 216/326 (66.26%), Query Frame = 0


Query: 29  SSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAY 88
           SS    P    + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++Y
Sbjct: 43  SSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSY 102

Query: 89  DIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQS--- 148
           DIAA RFRGRDAV NFK       D A    FL +HSK EIVDMLRKHTY DE++Q+   
Sbjct: 103 DIAACRFRGRDAVVNFK-NVLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKR 162

Query: 149 ----------KRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIP 208
                     KR G  TT           QN      REVLFEK VTPSDVGKLNRLVIP
Sbjct: 163 QLFLSVDANGKRNGSSTT-----------QNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 222

Query: 209 KQHAEKNFPL-GEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKT 268
           KQHAEK+FPL       TKG+L+NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK 
Sbjct: 223 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 282

Query: 269 LRAGDVVRFLRSTGPDKKLYIDGK----PGGVKAVQVVKLFGVNILEVP-------VGWC 327
           LRAGDVV F RSTG +++LYID K    P       VV+LFGV+I  V        V  C
Sbjct: 283 LRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVC 342

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy Swiss-Prot
Match: Q8RZX9 (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.5e-85
Identity = 176/282 (62.41%), Postives = 203/282 (71.99%), Query Frame = 0


Query: 45  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNF 104
           KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  E  AA+AYD+AA RFRGRDAVTNF
Sbjct: 76  KLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNF 135

Query: 105 KPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTT---TTTTAAAA 164
           +P A +  DAA E  FL + SK E+VDMLRKHTY DE+ QSKR    +T    TTTA+ +
Sbjct: 136 RPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLS 195

Query: 165 HSLQNA-----ASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP--LGEGMGSTKG 224
           +   ++     A  + R+ LF+KTVTPSDVGKLNRLVIPKQHAEK+FP  L    G +KG
Sbjct: 196 NGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKG 255

Query: 225 ILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLR---STGPDK 284
           +LLNFED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGDVV F R   S G D 
Sbjct: 256 VLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDG 315

Query: 285 KLYIDGK-----------PGGVKA---VQVVKLFGVNILEVP 300
           KL+ID K           P    A   V+ V+LFGV++L  P
Sbjct: 316 KLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: XP_023541268.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 649 bits (1675), Expect = 5.02e-235
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT 180
           LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT 180

Query: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSY 240
           VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSY
Sbjct: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSY 240

Query: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVPV 300
           VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVPV
Sbjct: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVPV 300

Query: 301 GWCGKRDREGLSELERTKKQRIVKAL 326
           GWCGKRDREGLSELERTKKQRIVKAL
Sbjct: 301 GWCGKRDREGLSELERTKKQRIVKAL 326

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: KAG6601748.1 (AP2/ERF and B3 domain-containing transcription factor ARF14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 629 bits (1621), Expect = 8.56e-227
Identity = 316/326 (96.93%), Postives = 319/326 (97.85%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSS  PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT 180
           LNSHSKLEIVDMLRKHTYNDE+QQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT 180

Query: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSY 240
           VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS KG+LLNFEDMGGKLWRFRYSYWNSSQSY
Sbjct: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGLLLNFEDMGGKLWRFRYSYWNSSQSY 240

Query: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVPV 300
           VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGK GGVK VQVVKLFGVNILEVPV
Sbjct: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPV 300

Query: 301 GWCGKRDREGLSELERTKKQRIVKAL 326
           GWCGKRDREGLSELER KKQRI KAL
Sbjct: 301 GWCGKRDREGLSELERAKKQRITKAL 326

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: KAG7032471.1 (AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 623 bits (1606), Expect = 1.60e-224
Identity = 315/326 (96.63%), Postives = 318/326 (97.55%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSS  PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSSSPGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKT 180
           LNSHSKLEIVDMLRKHTYNDE+QQSKRYGGGTTTTTTAAA HSLQNAASESDREVLFEKT
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTAAA-HSLQNAASESDREVLFEKT 180

Query: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSY 240
           VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS KG+LLNFEDMGGKLWRFRYSYWNSSQSY
Sbjct: 181 VTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSY 240

Query: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVPV 300
           VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGK GGVK VQVVKLFGVNILEVPV
Sbjct: 241 VLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVKLFGVNILEVPV 300

Query: 301 GWCGKRDREGLSELERTKKQRIVKAL 326
           GWCGKRDREGLSELER KKQRI KAL
Sbjct: 301 GWCGKRDREGLSELERAKKQRITKAL 325

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: XP_022930067.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita moschata])

HSP 1 Score: 620 bits (1600), Expect = 1.31e-223
Identity = 315/328 (96.04%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSS   PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSS---PGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTT--AAAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDE+QQSKRYGGGTTTTTT  AAAAHSLQNAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS KG+LLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+ GGVK VQVVKLFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERTKKQRIVKAL 326
           PVGWCGKRDREGLSELERTKKQRI+KAL
Sbjct: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 325

[Close]

BLAST of Cp4.1LG01g17620 vs. NCBI nr
Match: XP_022973620.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxima])

HSP 1 Score: 620 bits (1600), Expect = 1.41e-223
Identity = 312/327 (95.41%), Postives = 318/327 (97.25%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDS ASDSTSVSPVTPLLFHSSSSS PPGVPYDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSTASDSTSVSPVTPLLFHSSSSSSPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFN EHQAAKAYDIAALR+RGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNQEHQAAKAYDIAALRYRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTA-AAAHSLQNAASESDREVLFEK 180
           LNSHSKLEIVDMLRKHTYNDE+QQSKRYGGGTTTT TA AAAHSL NAASESDREVLFEK
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTATATAAAHSLHNAASESDREVLFEK 180

Query: 181 TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQS 240
           TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS KG+LLNFEDMGGKLWRFRYSYWNSSQS
Sbjct: 181 TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQS 240

Query: 241 YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVP 300
           YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGK GGVK VQVV+LFGVNILEVP
Sbjct: 241 YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVRLFGVNILEVP 300

Query: 301 VGWCGKRDREGLSELERTKKQRIVKAL 326
           VGWCGKRDREGLSELERTKKQR++KAL
Sbjct: 301 VGWCGKRDREGLSELERTKKQRMIKAL 327

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy TrEMBL
Match: A0A6J1EPB7 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111436555 PE=3 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 6.34e-224
Identity = 315/328 (96.04%), Postives = 320/328 (97.56%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDSAASDSTSVSPVTPLLFHSSSS   PGVP+DAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSS---PGVPHDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTT--AAAAHSLQNAASESDREVLFE 180
           LNSHSKLEIVDMLRKHTYNDE+QQSKRYGGGTTTTTT  AAAAHSLQNAASESDREVLFE
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFE 180

Query: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQ 240
           KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS KG+LLNFEDMGGKLWRFRYSYWNSSQ
Sbjct: 181 KTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQ 240

Query: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEV 300
           SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDG+ GGVK VQVVKLFGVNILEV
Sbjct: 241 SYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGRAGGVKPVQVVKLFGVNILEV 300

Query: 301 PVGWCGKRDREGLSELERTKKQRIVKAL 326
           PVGWCGKRDREGLSELERTKKQRI+KAL
Sbjct: 301 PVGWCGKRDREGLSELERTKKQRIIKAL 325

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy TrEMBL
Match: A0A6J1IBU1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111472203 PE=3 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 6.83e-224
Identity = 312/327 (95.41%), Postives = 318/327 (97.25%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNG 60
           MDTTSSLDDS ASDSTSVSPVTPLLFHSSSSS PPGVPYDAESRKLPSSRFKGVVPQPNG
Sbjct: 1   MDTTSSLDDSTASDSTSVSPVTPLLFHSSSSSSPPGVPYDAESRKLPSSRFKGVVPQPNG 60

Query: 61  RWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADF 120
           RWGAQIYEKHQRVWLGTFN EHQAAKAYDIAALR+RGRDAVTNFKPGAFSSVDAAFEADF
Sbjct: 61  RWGAQIYEKHQRVWLGTFNQEHQAAKAYDIAALRYRGRDAVTNFKPGAFSSVDAAFEADF 120

Query: 121 LNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTA-AAAHSLQNAASESDREVLFEK 180
           LNSHSKLEIVDMLRKHTYNDE+QQSKRYGGGTTTT TA AAAHSL NAASESDREVLFEK
Sbjct: 121 LNSHSKLEIVDMLRKHTYNDELQQSKRYGGGTTTTATATAAAHSLHNAASESDREVLFEK 180

Query: 181 TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQS 240
           TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGS KG+LLNFEDMGGKLWRFRYSYWNSSQS
Sbjct: 181 TVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQS 240

Query: 241 YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGGVKAVQVVKLFGVNILEVP 300
           YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGK GGVK VQVV+LFGVNILEVP
Sbjct: 241 YVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKAGGVKPVQVVRLFGVNILEVP 300

Query: 301 VGWCGKRDREGLSELERTKKQRIVKAL 326
           VGWCGKRDREGLSELERTKKQR++KAL
Sbjct: 301 VGWCGKRDREGLSELERTKKQRMIKAL 327

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy TrEMBL
Match: A0A6J1E5P2 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111430186 PE=3 SV=1)

HSP 1 Score: 468 bits (1205), Expect = 8.89e-164
Identity = 248/329 (75.38%), Postives = 276/329 (83.89%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGA 64
           SS+D+S  SDSTS+SPVTPLLFHSS +   PG+P++AESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 4   SSIDESRGSDSTSISPVTPLLFHSSPA---PGMPHEAESRKLPSSRFKGVVPQPNGRWGA 63

Query: 65  QIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSH 124
           QIYEKHQRVWLGTFN EH AA AYDIAALRFRGRDAVTNFK         A E +FLNSH
Sbjct: 64  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDKDAMEGEFLNSH 123

Query: 125 SKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPS 184
           SKLEIVDMLRKHTYN+E++QSKR  G       AAA  ++ ++  +S REVLFEKTVTPS
Sbjct: 124 SKLEIVDMLRKHTYNEELEQSKRQRGAI-----AAANTAVHHSGVDSKREVLFEKTVTPS 183

Query: 185 DVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTK 244
           DVGKLNRLVIPKQHAEKNFP+GEG+GS KG+LLN EDMGGK+WRFRYSYWNSSQSYVLTK
Sbjct: 184 DVGKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTK 243

Query: 245 GWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKP---GGVKAVQVVKLFGVNILEVP-- 304
           GWSRFVKEK+LRAGDVVRFLRSTG DK+LYIDGK    GGVKAV VVKLFGVNILEVP  
Sbjct: 244 GWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKATSEGGVKAVHVVKLFGVNILEVPLP 303

Query: 305 VGWCG--KRDREGLSELERTKKQRIVKAL 326
           VG CG   +++  L EL+ +KKQRI+KAL
Sbjct: 304 VGRCGGEPKNQGVLLELQPSKKQRIIKAL 324

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy TrEMBL
Match: A0A6J1IG08 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111472990 PE=3 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 1.08e-163
Identity = 248/329 (75.38%), Postives = 276/329 (83.89%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGA 64
           SS+D+S+ SDSTS+SP+TPLLFHSS +   PG+P++AESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 29  SSIDESSGSDSTSISPITPLLFHSSPA---PGMPHEAESRKLPSSRFKGVVPQPNGRWGA 88

Query: 65  QIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSH 124
           QIYEKHQRVWLGTFN EH AA AYDIAALRFRGRDAVTNFK       + A E +FLNSH
Sbjct: 89  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDDDDNDAMEGEFLNSH 148

Query: 125 SKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPS 184
           SKLEIVDMLRKHTYN+E+QQSKR  G       AAA   + ++  +S REVLFEKTVTPS
Sbjct: 149 SKLEIVDMLRKHTYNEELQQSKRQRGAI-----AAANTPVHHSGVDSKREVLFEKTVTPS 208

Query: 185 DVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTK 244
           DVGKLNRLVIPKQHAEKNFP GEG+GS KG+LLN EDMGGK+WRFRYSYWNSSQSYVLTK
Sbjct: 209 DVGKLNRLVIPKQHAEKNFPTGEGLGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTK 268

Query: 245 GWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKP---GGVKAVQVVKLFGVNILEVP-- 304
           GWSRFVKEK+LRAGDVVRFLRSTG DK+LYIDGK    GGVKAV VVKLFGVNILEVP  
Sbjct: 269 GWSRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAVHVVKLFGVNILEVPLP 328

Query: 305 VGWCG--KRDREGLSELERTKKQRIVKAL 326
           VG CG   +++  L EL+ +KKQRI+KAL
Sbjct: 329 VGRCGGEPKNQGVLLELQPSKKQRIIKAL 349

[Close]

BLAST of Cp4.1LG01g17620 vs. ExPASy TrEMBL
Match: A0A5D3BWI9 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00090 PE=3 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 8.38e-159
Identity = 241/326 (73.93%), Postives = 265/326 (81.29%), Query Frame = 0


Query: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGA 64
           SS+D+S ASDSTS+SPVTPLLFHSS     P    +AESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 4   SSIDESTASDSTSISPVTPLLFHSS-----PSATAEAESRKLPSSRFKGVVPQPNGRWGA 63

Query: 65  QIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSH 124
           QIYEKHQRVWLGTFN E+ AAKAYDIAALRFRGRDAVTNFKP      D A EADFLNSH
Sbjct: 64  QIYEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSH 123

Query: 125 SKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAH-SLQNAASESDREVLFEKTVTP 184
           SKLEIVDMLRKHTYN+E+QQSKR+  G     + +  H S   + S+S REVLFEKTVTP
Sbjct: 124 SKLEIVDMLRKHTYNEELQQSKRHQRGAMAVDSGSFPHYSGSGSGSDSKREVLFEKTVTP 183

Query: 185 SDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLT 244
           SDVGKLNRLVIPKQHAEKNFP+ EG+ S KG+LLNFEDMGGK+WRFRYSYWNSSQSYVLT
Sbjct: 184 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 243

Query: 245 KGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKP---GGVKAVQVVKLFGVNILEVPV 304
           KGWSRFVK+ TLRAGDVVRFLRSTGPDK+LYI   P    G+K V VVKLFGVNIL++PV
Sbjct: 244 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPV 303

Query: 305 GWCGKRDREGLSELERTKKQRIVKAL 326
           G   K +   L   + TKKQRI+K L
Sbjct: 304 G---KTEGAFLELQQPTKKQRIIKPL 321

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 340.5 bits (872), Expect = 1.5e-93
Identity = 190/298 (63.76%), Postives = 213/298 (71.48%), Query Frame = 0


Query: 40  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 99
           +AESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+A  RFR RD
Sbjct: 51  EAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRD 110

Query: 100 AVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSK--RYGGGTTTTTT 159
           AVTNFK           E DFLNSHSK EIVDMLRKHTYN+E++QSK  R G G  T T 
Sbjct: 111 AVTNFKDVKMDE----DEVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTL 170

Query: 160 AAAAHSLQNAASESDR--EVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPLGEGMGSTKGI 219
             +  S    ++   R  E LFEK VTPSDVGKLNRLVIPK HAEK+FPL     S KG+
Sbjct: 171 LTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGV 230

Query: 220 LLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYI 279
           LLNFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RS G D++LYI
Sbjct: 231 LLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYI 290

Query: 280 DGKP---GGVKAVQVVKLFGVNILEVP-----VGWCGKRDREGLSELERTKKQRIVKA 326
             K      + A +V++LFGVNI         VG     D E LS L  +KKQRI  A
Sbjct: 291 GWKSRSGSDLDAGRVLRLFGVNISPESSRNDVVGNKRVNDTEMLS-LVCSKKQRIFHA 343

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 338.6 bits (867), Expect = 5.7e-93
Identity = 191/305 (62.62%), Postives = 213/305 (69.84%), Query Frame = 0


Query: 40  DAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRD 99
           + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 100 AVTNFKPGAFSSVDA-AFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTA 159
           AVTNFK    S VD    E+ FL++HSK EIVDMLRKHTY DE +QS+R         + 
Sbjct: 121 AVTNFK----SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSG 180

Query: 160 AAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPL-------GEGMGS 219
               +  N A    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FPL       G     
Sbjct: 181 LETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSP 240

Query: 220 TKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDK 279
           TKG+L+N ED  GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK LRAGDVV F RSTGPD+
Sbjct: 241 TKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDR 300

Query: 280 KLYIDGKPGGVKAVQVVKLFGVNIL--------EVPVGWCG-KRDRE-GLSELERTKKQR 327
           +LYI  K        VV+LFGVNI         +V V   G KR RE  L  L  +KKQ 
Sbjct: 301 QLYIHWKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQA 360

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 331.6 bits (849), Expect = 6.9e-91
Identity = 193/339 (56.93%), Postives = 227/339 (66.96%), Query Frame = 0


Query: 1   MDTTSSLDDSAASDST-----SVSPVTPLLFHSSSSSC------PPGVPYDAESRKLPSS 60
           MD  SS+D+S+ +  +     S SP + L    S +S          V  +AESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAF 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFN E +AA+AYD+AA RFRGRDAVTNFK   F
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 SSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQSKRYGGGTTTTTTAAAAHSLQNAAS 180
                  E +FLN+HSK EIVDMLRKHTY +E+ Q KR   G    TTA A  S+     
Sbjct: 121 EE-----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTG 180

Query: 181 ESDREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PLGEGMGSTKGILLNFEDMGGKLW 240
               E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  PLG    S KG+LLNFED+ GK+W
Sbjct: 181 FKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW 240

Query: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGKPGG---VKA 300
           RFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++ F RS   D+K +I  K      ++ 
Sbjct: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLET 300

Query: 301 VQVVKLFGVNILEVPVGWCGKRDREGLSELERTKKQRIV 324
            +V++LFGV+I  +      K   E L    R KKQR++
Sbjct: 301 GRVMRLFGVDI-SLNAVVVVKETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 331.3 bits (848), Expect = 9.0e-91
Identity = 191/326 (58.59%), Postives = 216/326 (66.26%), Query Frame = 0


Query: 29  SSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAY 88
           SS    P    + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++Y
Sbjct: 43  SSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSY 102

Query: 89  DIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQS--- 148
           DIAA RFRGRDAV NFK       D A    FL +HSK EIVDMLRKHTY DE++Q+   
Sbjct: 103 DIAACRFRGRDAVVNFK-NVLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKR 162

Query: 149 ----------KRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIP 208
                     KR G  TT           QN      REVLFEK VTPSDVGKLNRLVIP
Sbjct: 163 QLFLSVDANGKRNGSSTT-----------QNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 222

Query: 209 KQHAEKNFPL-GEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKT 268
           KQHAEK+FPL       TKG+L+NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK 
Sbjct: 223 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 282

Query: 269 LRAGDVVRFLRSTGPDKKLYIDGK----PGGVKAVQVVKLFGVNILEVP-------VGWC 327
           LRAGDVV F RSTG +++LYID K    P       VV+LFGV+I  V        V  C
Sbjct: 283 LRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVC 342

[Close]

BLAST of Cp4.1LG01g17620 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 331.3 bits (848), Expect = 9.0e-91
Identity = 191/326 (58.59%), Postives = 216/326 (66.26%), Query Frame = 0


Query: 29  SSSSCPPGVPYDAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNHEHQAAKAY 88
           SS    P    + ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFN + +AA++Y
Sbjct: 43  SSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSY 102

Query: 89  DIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKLEIVDMLRKHTYNDEIQQS--- 148
           DIAA RFRGRDAV NFK       D A    FL +HSK EIVDMLRKHTY DE++Q+   
Sbjct: 103 DIAACRFRGRDAVVNFK-NVLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKR 162

Query: 149 ----------KRYGGGTTTTTTAAAAHSLQNAASESDREVLFEKTVTPSDVGKLNRLVIP 208
                     KR G  TT           QN      REVLFEK VTPSDVGKLNRLVIP
Sbjct: 163 QLFLSVDANGKRNGSSTT-----------QNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 222

Query: 209 KQHAEKNFPL-GEGMGSTKGILLNFEDMGGKLWRFRYSYWNSSQSYVLTKGWSRFVKEKT 268
           KQHAEK+FPL       TKG+L+NFED+ GK+WRFRYSYWNSSQSYVLTKGWSRFVKEK 
Sbjct: 223 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 282

Query: 269 LRAGDVVRFLRSTGPDKKLYIDGK----PGGVKAVQVVKLFGVNILEVP-------VGWC 327
           LRAGDVV F RSTG +++LYID K    P       VV+LFGV+I  V        V  C
Sbjct: 283 LRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVC 342

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZWM9	2.1e-92	63.76	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
Q9C6M5	8.0e-92	62.62	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
Q9LS06	9.7e-90	56.93	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
P82280	1.3e-89	58.59	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q8RZX9	1.5e-85	62.41	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of Cp4.1LG01g17620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541268.1	5.02e-235	100.00	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita pepo ...	[more]
KAG6601748.1	8.56e-227	96.93	AP2/ERF and B3 domain-containing transcription factor ARF14, partial [Cucurbita ...	[more]
KAG7032471.1	1.60e-224	96.63	AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbit...	[more]
XP_022930067.1	1.31e-223	96.04	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita mosch...	[more]
XP_022973620.1	1.41e-223	95.41	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxim...	[more]

BLAST of Cp4.1LG01g17620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPB7	6.34e-224	96.04	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A6J1IBU1	6.83e-224	95.41	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A6J1E5P2	8.89e-164	75.38	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A6J1IG08	1.08e-163	75.38	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A5D3BWI9	8.38e-159	73.93	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo ...	[more]

BLAST of Cp4.1LG01g17620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13260.1	1.5e-93	63.76	related to ABI3/VP1 1	[more]
AT1G25560.1	5.7e-93	62.62	AP2/B3 transcription factor family protein	[more]
AT3G25730.1	6.9e-91	56.93	ethylene response DNA binding factor 3	[more]
AT1G68840.1	9.0e-91	58.59	related to ABI3/VP1 2	[more]
AT1G68840.2	9.0e-91	58.59	related to ABI3/VP1 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 50..111 e-value: 1.4E-27 score: 107.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 49..97 e-value: 1.3E-7 score: 31.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 50..105 score: 19.941164
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 49..104 e-value: 4.57849E-25 score: 93.8754
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 177..279 e-value: 6.4E-23 score: 92.1
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 177..271 e-value: 1.4E-26 score: 92.3
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 177..279 score: 13.591675
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 176..263 e-value: 1.74421E-26 score: 98.554
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 49..106 e-value: 2.8E-20 score: 74.2
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 165..282 e-value: 1.5E-43 score: 149.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 173..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31140:SF1	AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1	coord: 38..302
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 38..302
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 49..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17620.1	Cp4.1LG01g17620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity