Cp4.1LG01g17580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein WIP6-like
Location	Cp4.1LG01: 13481581 .. 13483282 (+)
RNA-Seq Expression	Cp4.1LG01g17580
Synteny	Cp4.1LG01g17580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATCTCCTTTAATAACAAAAGTGGGAGAGAGTGACCCACGCCTTCGATTCTACTGTTTTCCATGTCCTCTCACTCTATTTTGCTTCTCTCTATCTATCATTCCTCACTCTATCTTCCTCCCCTCAGATAAAAGAAAGAGCGGTACGCCATTCTAGGCATGGACTTGGCCCACTCCTTCTCCTTCTTTGCCGCTTCCTTGTCTCCTCCATTCCCATTCCTCTCCACCTTAACCTCTGCATATCAACTTCCCACCTCAATGTCTAATTCAACTCAACTCTTTTCTCGTCTTTTATTTTAATATTAATATATCCAACATCTGATCATGTTAATATGTATTTAAATATTTGACGTTTATAACAGATAATATCATCTAGTTGTGTTACCCTTTCTTTATTTATTGCCTGTTTTCCTTCCATGCTCCACACCTATCTTCTCTCTCACGGAAAGGTCTGTCTTTTTAATCAACAAACATGCGGAGTGGGAACTTGACTTGCATATCGTCGAGTGAGAGCGCGTGTTTGGAGGGTGATGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGACTCCATTTTCCTATCCCTTTGTCCGCCAGGCCAACGCCACACAGTTTCTTCCAAACACCGACAACTCCAAAACAAACAAAATCCTGTTACCCCTAATTCCTCTCTCCAAAACCCTAATATTCTTCATCATCAACATGCTGCTGTCACCGTCGCTATGCATATTGGTCCCCCTGCCACCGCCGCCGCCACCGAATCCAACGACGTCTCGGCTGCCCGCCCGGTTGATGGGCAGTACTGGATTCCTACGCCTGCCCAAATCCTCGTTGGTCCCACCCAGTTCTCCTGCTCTGTCTGCAGTAAAACCTTCAACAGATACAACAACATGCAGGTTATTTCCCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAAAATCTTTCAGTTTGATTTGCTACATAGACATATTCTTTTGGTTTTTCTGTTTTTTATGAATTGAAAAAAGCATGGAGTTAAAAAAGAAAAGGTTCGTTTTAAAATTTTTTGTAGTGATTCTTGTTTCAAGTTATGATTTAAGAACAAAATGGAGTAGAAATAGAGGCAAAATTGAGACTTAAAACACGATTTGAAAGGAAAATTTGAGGTATGAGAGGCTAAATTTGACCCAAAGAAGTTGAATTTTGCAAAAACAGATGCACATGTGGGGACATGGATCACAGTACAGAAAAGGGCCAGAATCATTAAGAGGATCAAAGCCAGCTTCATCAATGCTACGACTTCCATGCTATTGCTGTGCAGAAGGGTGCAAAAACAACATAGAGCATCCAAGGTCAAGGCCATTGAAAGACTTCAGGACTCTTCAGACCCATTACAAGAGAAAGCATGGAGCAAAGCCTTTCAGTTGTAGGAAATGTGGGAAGCCCTTTGCAGTCCGAGGGGATTGGAGGACACATGAGAAGAACTGTGGAAAGCTTTGGTTTTGCATTTGTGGGTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCGAGCCTTTGGAGATGGGCATGCACCTCATACGGTCCAACTTTGTGAGGTTGAAGATGATGATTGGGATGATAATGATGATCATGAACATGTAAATGGATCTCAACCCTGGTCAATTTATCATTAATTTTAATTTCCATGCTTCTTAATTAATCTACCAT

mRNA sequence

GCATCTCCTTTAATAACAAAAGTGGGAGAGAGTGACCCACGCCTTCGATTCTACTGTTTTCCATGTCCTCTCACTCTATTTTGCTTCTCTCTATCTATCATTCCTCACTCTATCTTCCTCCCCTCAGATAAAAGAAAGAGCGGTACGCCATTCTAGGCATGGACTTGGCCCACTCCTTCTCCTTCTTTGCCGCTTCCTTGTCTCCTCCATTCCCATTCCTCTCCACCTTAACCTCTGCATATCAACTTCCCACCTCAATGTCTAATTCAACTCAACTCTTTTCTCGTCTTTTATTTTAATATTAATATATCCAACATCTGATCATGTTAATATGTATTTAAATATTTGACGTTTATAACAGATAATATCATCTAGTTGTGTTACCCTTTCTTTATTTATTGCCTGTTTTCCTTCCATGCTCCACACCTATCTTCTCTCTCACGGAAAGGTCTGTCTTTTTAATCAACAAACATGCGGAGTGGGAACTTGACTTGCATATCGTCGAGTGAGAGCGCGTGTTTGGAGGGTGATGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGACTCCATTTTCCTATCCCTTTGTCCGCCAGGCCAACGCCACACAGTTTCTTCCAAACACCGACAACTCCAAAACAAACAAAATCCTGTTACCCCTAATTCCTCTCTCCAAAACCCTAATATTCTTCATCATCAACATGCTGCTGTCACCGTCGCTATGCATATTGGTCCCCCTGCCACCGCCGCCGCCACCGAATCCAACGACGTCTCGGCTGCCCGCCCGGTTGATGGGCAGTACTGGATTCCTACGCCTGCCCAAATCCTCGTTGGTCCCACCCAGTTCTCCTGCTCTGTCTGCAGTAAAACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGACATGGATCACAGTACAGAAAAGGGCCAGAATCATTAAGAGGATCAAAGCCAGCTTCATCAATGCTACGACTTCCATGCTATTGCTGTGCAGAAGGGTGCAAAAACAACATAGAGCATCCAAGGTCAAGGCCATTGAAAGACTTCAGGACTCTTCAGACCCATTACAAGAGAAAGCATGGAGCAAAGCCTTTCAGTTGTAGGAAATGTGGGAAGCCCTTTGCAGTCCGAGGGGATTGGAGGACACATGAGAAGAACTGTGGAAAGCTTTGGTTTTGCATTTGTGGGTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCGAGCCTTTGGAGATGGGCATGCACCTCATACGGTCCAACTTTGTGAGGTTGAAGATGATGATTGGGATGATAATGATGATCATGAACATGTAAATGGATCTCAACCCTGGTCAATTTATCATTAATTTTAATTTCCATGCTTCTTAATTAATCTACCAT

Coding sequence (CDS)

ATGCGGAGTGGGAACTTGACTTGCATATCGTCGAGTGAGAGCGCGTGTTTGGAGGGTGATGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGACTCCATTTTCCTATCCCTTTGTCCGCCAGGCCAACGCCACACAGTTTCTTCCAAACACCGACAACTCCAAAACAAACAAAATCCTGTTACCCCTAATTCCTCTCTCCAAAACCCTAATATTCTTCATCATCAACATGCTGCTGTCACCGTCGCTATGCATATTGGTCCCCCTGCCACCGCCGCCGCCACCGAATCCAACGACGTCTCGGCTGCCCGCCCGGTTGATGGGCAGTACTGGATTCCTACGCCTGCCCAAATCCTCGTTGGTCCCACCCAGTTCTCCTGCTCTGTCTGCAGTAAAACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGACATGGATCACAGTACAGAAAAGGGCCAGAATCATTAAGAGGATCAAAGCCAGCTTCATCAATGCTACGACTTCCATGCTATTGCTGTGCAGAAGGGTGCAAAAACAACATAGAGCATCCAAGGTCAAGGCCATTGAAAGACTTCAGGACTCTTCAGACCCATTACAAGAGAAAGCATGGAGCAAAGCCTTTCAGTTGTAGGAAATGTGGGAAGCCCTTTGCAGTCCGAGGGGATTGGAGGACACATGAGAAGAACTGTGGAAAGCTTTGGTTTTGCATTTGTGGGTCTGATTTTAAGCACAAAAGATCCCTTAAAGACCATGTTCGAGCCTTTGGAGATGGGCATGCACCTCATACGGTCCAACTTTGTGAGGTTGAAGATGATGATTGGGATGATAATGATGATCATGAACATGTAAATGGATCTCAACCCTGGTCAATTTATCATTAA

Protein sequence

MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPVTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH

Homology

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BLAST of Cp4.1LG01g17580 vs. ExPASy Swiss-Prot
Match: Q9FX68 (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.2e-98
Identity = 177/260 (68.08%), Postives = 202/260 (77.69%), Query Frame = 0


Query: 29  GGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPVTPNSSLQNPNILHHQHAAVTVAMHIGP 88
           G EDS+ LSL PPGQ++   +K    +   +    N  L NPN        VTVA+HIGP
Sbjct: 11  GDEDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEF-NHPLTNPN-------GVTVALHIGP 70

Query: 89  PATAAATES--NDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWG 148
           P++   T S  N+        GQYWIP+ +QILVGPTQFSCSVC+KTFNR+NNMQMHMWG
Sbjct: 71  PSSDKETLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWG 130

Query: 149 HGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHG 208
           HGSQYRKGPESLRG+K +SS+LRLPCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG
Sbjct: 131 HGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHG 190

Query: 209 AKPFSCR-KCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHT 268
           AKPF CR KC K FAVRGDWRTHEKNCGKLWFC+CGSDFKHKRSLKDHVRAFGDGHA HT
Sbjct: 191 AKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHT 250

Query: 269 V--QLCEVEDDDWDDNDDHE 284
           V  ++  + D D DD ++ E
Sbjct: 251 VSDRVVGIGDADEDDEEEEE 262

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BLAST of Cp4.1LG01g17580 vs. ExPASy Swiss-Prot
Match: Q9SVY1 (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.9e-85
Identity = 138/180 (76.67%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 108 GQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSM 167
           GQYWIPTP+QIL+GPTQFSC VC KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + M
Sbjct: 200 GQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGM 259

Query: 168 LRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRT 227
           LRLPCYCCA GC+NNI+HPR++PLKDFRTLQTHYKRKHG KPF CRKCGK FAVRGDWRT
Sbjct: 260 LRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRT 319

Query: 228 HEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDD----NDDHE 284
           HEKNCGKLW+CICGSDFKHKRSLKDH++AFG+GH  + +   + ED+   +    ++DHE
Sbjct: 320 HEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHE 378

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BLAST of Cp4.1LG01g17580 vs. ExPASy Swiss-Prot
Match: Q8W031 (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 5.2e-82
Identity = 137/218 (62.84%), Postives = 167/218 (76.61%), Query Frame = 0


Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           + P+++    +  H +   VTV  H+         + +D          YWIPTP+QIL+
Sbjct: 122 IAPDATTDEQDQDHDRGVEVTVESHL--------DDDDDHHGDLHRGHHYWIPTPSQILI 181

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQF+C +C KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + MLRLPC+CCA GCK
Sbjct: 182 GPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGMLRLPCFCCAPGCK 241

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNI+HPR++PLKDFRTLQTHYKRKHG+KPF+CR CGK FAV+GDWRTHEKNCGKLW+C C
Sbjct: 242 NNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSC 301

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDD 279
           GSDFKHKRSLKDHV+AFG+GH P  +     + +D+ D
Sbjct: 302 GSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYD 330

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BLAST of Cp4.1LG01g17580 vs. ExPASy Swiss-Prot
Match: Q8W030 (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.8e-82
Identity = 150/260 (57.69%), Postives = 183/260 (70.38%), Query Frame = 0


Query: 32  DSIFLSLCPPGQRHTVS-SKHRQLQN-------KQNPVTPNSSLQNPNILHHQHAAVTVA 91
           +S FL  C    RH V+   H  L N         + V  ++  Q  +  HHQ   + V 
Sbjct: 161 NSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVT 220

Query: 92  MHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMH 151
           M     A+    E   +     +   +WIPTP+QIL+GPTQFSC +C KTFNRYNNMQMH
Sbjct: 221 M-----ASDHDDEHGGLQRGNHLH-HFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMH 280

Query: 152 MWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKR 211
           MWGHGSQYRKGPESLRG++P ++ML+LPCYCCA GCKNNI+HPR+RPLKDFRTLQTHYKR
Sbjct: 281 MWGHGSQYRKGPESLRGTQP-TAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKR 340

Query: 212 KHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAP 271
           KHG +PF+CR+CGK FAV+GDWRTHEKNCGKLW+C CGSDFKHKRSLKDHV+AFG+GH P
Sbjct: 341 KHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVP 400

Query: 272 HTVQLCEVEDDDWDDNDDHE 284
                C ++ ++ +   D E
Sbjct: 401 ----CCGIDHEEEEAASDVE 409

[Close]

BLAST of Cp4.1LG01g17580 vs. ExPASy Swiss-Prot
Match: Q9SGD1 (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.5e-81
Identity = 126/167 (75.45%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 109 QYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSML 168
           ++WIP+PAQI VGP QF+CS+CSKTFNRYNNMQMHMWGHGS++RKG +SL+G+   +++L
Sbjct: 164 RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAIL 223

Query: 169 RLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTH 228
           RLPCYCCAEGCKNNI HPRS+PLKDFRTLQTHYKRKHG+KPFSC KCGK  AV+GDWRTH
Sbjct: 224 RLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTH 283

Query: 229 EKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDD 276
           EKNCGKLW+C CGSDFKHKRSLKDH+R+FG GH+PH   L +  ++D
Sbjct: 284 EKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEED 330

[Close]

BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: XP_023546764.1 (zinc finger protein WIP6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546773.1 zinc finger protein WIP6-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 637 bits (1642), Expect = 4.79e-231
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP
Sbjct: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV
Sbjct: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK
Sbjct: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC
Sbjct: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH 295
           GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH
Sbjct: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH 295

[Close]

BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: XP_022973621.1 (zinc finger protein WIP6-like [Cucurbita maxima])

HSP 1 Score: 620 bits (1598), Expect = 2.19e-224
Identity = 288/295 (97.63%), Postives = 291/295 (98.64%), Query Frame = 0


Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           MRSGNLTCISSSESACLEGDEE   GGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQ P
Sbjct: 1   MRSGNLTCISSSESACLEGDEE---GGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQIP 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           ++PNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV
Sbjct: 61  ISPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK
Sbjct: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC
Sbjct: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH 295
           GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNG+QPWSIYH
Sbjct: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGAQPWSIYH 292

[Close]

BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: KAG6601746.1 (Zinc finger protein WIP6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 616 bits (1588), Expect = 7.08e-223
Identity = 287/295 (97.29%), Postives = 289/295 (97.97%), Query Frame = 0


Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           MRSGNLTCISSSESACLEGDEE    GGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQ P
Sbjct: 1   MRSGNLTCISSSESACLEGDEE----GGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQIP 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           V+PNSSLQNPNILHHQHAAVTVAMHIGPPA AAATESNDVSAARPVDGQYWIPTPAQILV
Sbjct: 61  VSPNSSLQNPNILHHQHAAVTVAMHIGPPANAAATESNDVSAARPVDGQYWIPTPAQILV 120

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK
Sbjct: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC
Sbjct: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH 295
           GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNG+QPWSIYH
Sbjct: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGAQPWSIYH 291

[Close]

BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: XP_022930100.1 (zinc finger protein WIP6-like [Cucurbita moschata])

HSP 1 Score: 614 bits (1583), Expect = 4.25e-222
Identity = 289/295 (97.97%), Postives = 291/295 (98.64%), Query Frame = 0


Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           MRSGNLTCISSSES  LEGDE GGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQ P
Sbjct: 1   MRSGNLTCISSSES--LEGDE-GGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQIP 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           V+PNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV
Sbjct: 61  VSPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK
Sbjct: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC
Sbjct: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH 295
           GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNG+QPWSIYH
Sbjct: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGAQPWSIYH 292

[Close]

BLAST of Cp4.1LG01g17580 vs. NCBI nr
Match: KAG7032470.1 (Zinc finger protein WIP6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 590 bits (1521), Expect = 1.29e-211
Identity = 277/284 (97.54%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           MRSGNLTCISSSESACLEGDEE    G GGEDSIFLSLCPPGQRHTVSSKHRQLQNKQ P
Sbjct: 1   MRSGNLTCISSSESACLEGDEE----GEGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQIP 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           V+PNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV
Sbjct: 61  VSPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK
Sbjct: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC
Sbjct: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEH 284
           GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEH
Sbjct: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEH 280

[Close]

BLAST of Cp4.1LG01g17580 vs. ExPASy TrEMBL
Match: A0A6J1I950 (zinc finger protein WIP6-like OS=Cucurbita maxima OX=3661 GN=LOC111472204 PE=3 SV=1)

HSP 1 Score: 620 bits (1598), Expect = 1.06e-224
Identity = 288/295 (97.63%), Postives = 291/295 (98.64%), Query Frame = 0


Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           MRSGNLTCISSSESACLEGDEE   GGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQ P
Sbjct: 1   MRSGNLTCISSSESACLEGDEE---GGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQIP 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           ++PNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV
Sbjct: 61  ISPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK
Sbjct: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC
Sbjct: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH 295
           GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNG+QPWSIYH
Sbjct: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGAQPWSIYH 292

[Close]

BLAST of Cp4.1LG01g17580 vs. ExPASy TrEMBL
Match: A0A6J1EW22 (zinc finger protein WIP6-like OS=Cucurbita moschata OX=3662 GN=LOC111436584 PE=3 SV=1)

HSP 1 Score: 614 bits (1583), Expect = 2.06e-222
Identity = 289/295 (97.97%), Postives = 291/295 (98.64%), Query Frame = 0


Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           MRSGNLTCISSSES  LEGDE GGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQ P
Sbjct: 1   MRSGNLTCISSSES--LEGDE-GGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQIP 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           V+PNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV
Sbjct: 61  VSPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK
Sbjct: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC
Sbjct: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGSQPWSIYH 295
           GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNG+QPWSIYH
Sbjct: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDDHEHVNGAQPWSIYH 292

[Close]

BLAST of Cp4.1LG01g17580 vs. ExPASy TrEMBL
Match: A0A6J1DR05 (zinc finger protein WIP6 OS=Momordica charantia OX=3673 GN=LOC111022346 PE=3 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 6.26e-171
Identity = 239/312 (76.60%), Postives = 248/312 (79.49%), Query Frame = 0


Query: 1   MRSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNP 60
           M+S N TCISSSESACLE DEE       GEDSIFLSLCPPGQRH   S   Q   + NP
Sbjct: 1   MQSSNFTCISSSESACLEPDEE-------GEDSIFLSLCPPGQRHASISSKYQKHPQNNP 60

Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
                         H  AAVTVAMHIGPP  AAA +S D  AARPVDGQYWIPTPAQILV
Sbjct: 61  T-------------HGAAAVTVAMHIGPP-LAAAADSTD-GAARPVDGQYWIPTPAQILV 120

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQFSC+VCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGC+
Sbjct: 121 GPTQFSCTVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCR 180

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC
Sbjct: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDDNDD-----------------HE 295
           GSDFKHKRSLKDHVRAFGDGHAPHTVQ+CEV+DDD DD DD                 H+
Sbjct: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQVCEVDDDDEDDVDDDWDIDKNNNDNNDILHHHQ 290

[Close]

BLAST of Cp4.1LG01g17580 vs. ExPASy TrEMBL
Match: A0A5A7VHR3 (Zinc finger protein WIP6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00270 PE=3 SV=1)

HSP 1 Score: 472 bits (1214), Expect = 3.18e-166
Identity = 236/305 (77.38%), Postives = 255/305 (83.61%), Query Frame = 0


Query: 2   RSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPV 61
           +S  L+CISSSESACLEGDEE       GE+SIFLSL PPGQR++ SSK +Q       +
Sbjct: 3   QSRKLSCISSSESACLEGDEE-------GEESIFLSLSPPGQRNSFSSKQQQT------I 62

Query: 62  TPNSSLQNPNILHHQH-----AAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPA 121
            PNSSLQNPN  ++ H     AAVTVAMHIGPP    A  S+  SA RP+D  YWIPTPA
Sbjct: 63  YPNSSLQNPNNNNNNHHHENGAAVTVAMHIGPPP---ALISSAPSAVRPLD--YWIPTPA 122

Query: 122 QILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCA 181
           QILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGS+YRKGPESLRGSK ASSMLR+PCYCCA
Sbjct: 123 QILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKAASSMLRVPCYCCA 182

Query: 182 EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLW 241
           EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGK FAVRGDWRTHEKNCGKLW
Sbjct: 183 EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLW 242

Query: 242 FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDD----DWD-DNDDHEHVNGS-QP 295
           FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDD    +W+ D+  H+H+NGS Q 
Sbjct: 243 FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDNDDDEWESDHHHHQHLNGSPQT 289

[Close]

BLAST of Cp4.1LG01g17580 vs. ExPASy TrEMBL
Match: A0A1S3CR84 (zinc finger protein WIP6-like OS=Cucumis melo OX=3656 GN=LOC103503431 PE=3 SV=1)

HSP 1 Score: 472 bits (1214), Expect = 3.18e-166
Identity = 236/305 (77.38%), Postives = 255/305 (83.61%), Query Frame = 0


Query: 2   RSGNLTCISSSESACLEGDEEGGGGGGGGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPV 61
           +S  L+CISSSESACLEGDEE       GE+SIFLSL PPGQR++ SSK +Q       +
Sbjct: 3   QSRKLSCISSSESACLEGDEE-------GEESIFLSLSPPGQRNSFSSKQQQT------I 62

Query: 62  TPNSSLQNPNILHHQH-----AAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPA 121
            PNSSLQNPN  ++ H     AAVTVAMHIGPP    A  S+  SA RP+D  YWIPTPA
Sbjct: 63  YPNSSLQNPNNNNNNHHHENGAAVTVAMHIGPPP---ALISSAPSAVRPLD--YWIPTPA 122

Query: 122 QILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCA 181
           QILVGPTQFSCSVC+KTFNRYNNMQMHMWGHGS+YRKGPESLRGSK ASSMLR+PCYCCA
Sbjct: 123 QILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKAASSMLRVPCYCCA 182

Query: 182 EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLW 241
           EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGK FAVRGDWRTHEKNCGKLW
Sbjct: 183 EGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKSFAVRGDWRTHEKNCGKLW 242

Query: 242 FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDD----DWD-DNDDHEHVNGS-QP 295
           FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDD    +W+ D+  H+H+NGS Q 
Sbjct: 243 FCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDNDDDEWESDHHHHQHLNGSPQT 289

[Close]

BLAST of Cp4.1LG01g17580 vs. TAIR 10
Match: AT1G13290.1 (C2H2-like zinc finger protein )

HSP 1 Score: 359.0 bits (920), Expect = 3.7e-99
Identity = 177/260 (68.08%), Postives = 202/260 (77.69%), Query Frame = 0


Query: 29  GGEDSIFLSLCPPGQRHTVSSKHRQLQNKQNPVTPNSSLQNPNILHHQHAAVTVAMHIGP 88
           G EDS+ LSL PPGQ++   +K    +   +    N  L NPN        VTVA+HIGP
Sbjct: 11  GDEDSVVLSLGPPGQQYPSHNKPTSTKPSSDHEF-NHPLTNPN-------GVTVALHIGP 70

Query: 89  PATAAATES--NDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWG 148
           P++   T S  N+        GQYWIP+ +QILVGPTQFSCSVC+KTFNR+NNMQMHMWG
Sbjct: 71  PSSDKETLSGGNNQEGLTARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWG 130

Query: 149 HGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHG 208
           HGSQYRKGPESLRG+K +SS+LRLPCYCCAEGCKNNI+HPRS+PLKDFRTLQTHYKRKHG
Sbjct: 131 HGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHG 190

Query: 209 AKPFSCR-KCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHT 268
           AKPF CR KC K FAVRGDWRTHEKNCGKLWFC+CGSDFKHKRSLKDHVRAFGDGHA HT
Sbjct: 191 AKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHT 250

Query: 269 V--QLCEVEDDDWDDNDDHE 284
           V  ++  + D D DD ++ E
Sbjct: 251 VSDRVVGIGDADEDDEEEEE 262

[Close]

BLAST of Cp4.1LG01g17580 vs. TAIR 10
Match: AT3G57670.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 316.6 bits (810), Expect = 2.1e-86
Identity = 138/180 (76.67%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 108 GQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSM 167
           GQYWIPTP+QIL+GPTQFSC VC KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + M
Sbjct: 200 GQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGM 259

Query: 168 LRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRT 227
           LRLPCYCCA GC+NNI+HPR++PLKDFRTLQTHYKRKHG KPF CRKCGK FAVRGDWRT
Sbjct: 260 LRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRT 319

Query: 228 HEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDD----NDDHE 284
           HEKNCGKLW+CICGSDFKHKRSLKDH++AFG+GH  + +   + ED+   +    ++DHE
Sbjct: 320 HEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHE 378

[Close]

BLAST of Cp4.1LG01g17580 vs. TAIR 10
Match: AT1G51220.1 (WIP domain protein 5 )

HSP 1 Score: 305.8 bits (782), Expect = 3.7e-83
Identity = 137/218 (62.84%), Postives = 167/218 (76.61%), Query Frame = 0


Query: 61  VTPNSSLQNPNILHHQHAAVTVAMHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILV 120
           + P+++    +  H +   VTV  H+         + +D          YWIPTP+QIL+
Sbjct: 122 IAPDATTDEQDQDHDRGVEVTVESHL--------DDDDDHHGDLHRGHHYWIPTPSQILI 181

Query: 121 GPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCK 180
           GPTQF+C +C KTFNRYNNMQMHMWGHGSQYRKGPESLRG++P + MLRLPC+CCA GCK
Sbjct: 182 GPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQP-TGMLRLPCFCCAPGCK 241

Query: 181 NNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCIC 240
           NNI+HPR++PLKDFRTLQTHYKRKHG+KPF+CR CGK FAV+GDWRTHEKNCGKLW+C C
Sbjct: 242 NNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSC 301

Query: 241 GSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDWDD 279
           GSDFKHKRSLKDHV+AFG+GH P  +     + +D+ D
Sbjct: 302 GSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYD 330

[Close]

BLAST of Cp4.1LG01g17580 vs. TAIR 10
Match: AT3G20880.1 (WIP domain protein 4 )

HSP 1 Score: 305.1 bits (780), Expect = 6.3e-83
Identity = 150/260 (57.69%), Postives = 183/260 (70.38%), Query Frame = 0


Query: 32  DSIFLSLCPPGQRHTVS-SKHRQLQN-------KQNPVTPNSSLQNPNILHHQHAAVTVA 91
           +S FL  C    RH V+   H  L N         + V  ++  Q  +  HHQ   + V 
Sbjct: 161 NSNFLDQCQDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVT 220

Query: 92  MHIGPPATAAATESNDVSAARPVDGQYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMH 151
           M     A+    E   +     +   +WIPTP+QIL+GPTQFSC +C KTFNRYNNMQMH
Sbjct: 221 M-----ASDHDDEHGGLQRGNHLH-HFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMH 280

Query: 152 MWGHGSQYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKR 211
           MWGHGSQYRKGPESLRG++P ++ML+LPCYCCA GCKNNI+HPR+RPLKDFRTLQTHYKR
Sbjct: 281 MWGHGSQYRKGPESLRGTQP-TAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKR 340

Query: 212 KHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAP 271
           KHG +PF+CR+CGK FAV+GDWRTHEKNCGKLW+C CGSDFKHKRSLKDHV+AFG+GH P
Sbjct: 341 KHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVP 400

Query: 272 HTVQLCEVEDDDWDDNDDHE 284
                C ++ ++ +   D E
Sbjct: 401 ----CCGIDHEEEEAASDVE 409

[Close]

BLAST of Cp4.1LG01g17580 vs. TAIR 10
Match: AT1G08290.1 (WIP domain protein 3 )

HSP 1 Score: 302.0 bits (772), Expect = 5.3e-82
Identity = 126/167 (75.45%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 109 QYWIPTPAQILVGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGSKPASSML 168
           ++WIP+PAQI VGP QF+CS+CSKTFNRYNNMQMHMWGHGS++RKG +SL+G+   +++L
Sbjct: 164 RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAIL 223

Query: 169 RLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTH 228
           RLPCYCCAEGCKNNI HPRS+PLKDFRTLQTHYKRKHG+KPFSC KCGK  AV+GDWRTH
Sbjct: 224 RLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTH 283

Query: 229 EKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDD 276
           EKNCGKLW+C CGSDFKHKRSLKDH+R+FG GH+PH   L +  ++D
Sbjct: 284 EKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFEED 330

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FX68	5.2e-98	68.08	Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1	[more]
Q9SVY1	2.9e-85	76.67	Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1	[more]
Q8W031	5.2e-82	62.84	Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1	[more]
Q8W030	8.8e-82	57.69	Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1	[more]
Q9SGD1	7.5e-81	75.45	Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g17580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546764.1	4.79e-231	100.00	zinc finger protein WIP6-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546...	[more]
XP_022973621.1	2.19e-224	97.63	zinc finger protein WIP6-like [Cucurbita maxima]	[more]
KAG6601746.1	7.08e-223	97.29	Zinc finger protein WIP6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022930100.1	4.25e-222	97.97	zinc finger protein WIP6-like [Cucurbita moschata]	[more]
KAG7032470.1	1.29e-211	97.54	Zinc finger protein WIP6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG01g17580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I950	1.06e-224	97.63	zinc finger protein WIP6-like OS=Cucurbita maxima OX=3661 GN=LOC111472204 PE=3 S...	[more]
A0A6J1EW22	2.06e-222	97.97	zinc finger protein WIP6-like OS=Cucurbita moschata OX=3662 GN=LOC111436584 PE=3...	[more]
A0A6J1DR05	6.26e-171	76.60	zinc finger protein WIP6 OS=Momordica charantia OX=3673 GN=LOC111022346 PE=3 SV=...	[more]
A0A5A7VHR3	3.18e-166	77.38	Zinc finger protein WIP6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CR84	3.18e-166	77.38	zinc finger protein WIP6-like OS=Cucumis melo OX=3656 GN=LOC103503431 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g17580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13290.1	3.7e-99	68.08	C2H2-like zinc finger protein	[more]
AT3G57670.1	2.1e-86	76.67	C2H2-type zinc finger family protein	[more]
AT1G51220.1	3.7e-83	62.84	WIP domain protein 5	[more]
AT3G20880.1	6.3e-83	57.69	WIP domain protein 4	[more]
AT1G08290.1	5.3e-82	75.45	WIP domain protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 173..205 e-value: 220.0 score: 1.4 coord: 210..230 e-value: 65.0 score: 6.0 coord: 125..147 e-value: 0.15 score: 21.1
IPR013087	Zinc finger C2H2-type	PFAM	PF00096	zf-C2H2	coord: 125..144 e-value: 0.012 score: 16.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 127..147
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 125..152 score: 10.366926
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 124..147 e-value: 1.4E-5 score: 26.8
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 169..256 e-value: 9.7E-6 score: 27.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..35
None	No IPR available	PANTHER	PTHR45878:SF25	ZINC FINGER PROTEIN WIP6	coord: 9..284
IPR043584	Zinc finger protein WIP	PANTHER	PTHR45878	ZINC FINGER PROTEIN WIP2	coord: 9..284
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 193..230
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 121..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17580.1	Cp4.1LG01g17580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity