Cp4.1LG01g17530 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17530
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	agamous-like MADS-box protein AGL80
Location	Cp4.1LG01: 13577459 .. 13578284 (-)
RNA-Seq Expression	Cp4.1LG01g17530
Synteny	Cp4.1LG01g17530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATATGAATCACAAGAATAAAAAAGAAAAAAAAAAAAAAAAAAAAGAAAATCATGACGAGGAAGAAAGTGAAGCTGGCTTACATTGTGAACGACTCCGCAAGAAAGGCGACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAGGTGAGTGAATTGAGCACCCTTTGCGGGATTGAGGCATGCGCCATCGTGTTTAGCCCCTACGATGCTCAGCCTGAGCTGTGGCCTTCCCCCATCGGCGTCCAGCGCGTTCTCTCTCAATTCAAGAAGATGCCCGAGATGGAGCAAAGCAAGAAAATGGTGCATTTTTCAGACACCCTTTTGTTTCTTTTCAAAATTGAGTGTCCTAACACAAGCTGCTGCCCTTTCCCTTGACACAGGTGAACCAGGAGACGTTTCTGCGGCAGAGGATCGCCAAGGCCAATGACCAACTGAAGAAGATGAGAAAGGACAACCGGGAGAAAGAGATGACGCGGCTTATGTTTCAAAGCCTCACCGCTGCCAAAGGCCTTCATGCACTCAACATGCTTGACTTGAACGACCTCACTTGGCTCATTGATCAAAATCTCAAAGACATTACTAAACGCATTGACTCTCTCAAGAAGCCTCCGCCCCACTCTCAGCCACACCCTCACCCTCACCCTCACCCTCAGCCGCCTCCCCCGCCCCAGACCGCCGCCTGGCTTATGGAGCTTGTCAGCCCTCAGGACCAAATGGGGTTCGTCGGGGATGACATGCTCTTGCCCTTCGGAGATCAAACTTATAGCCATAATAATGCAATGTGGTCAAATGCCTTTTTCCCTTAGCTTTCTGTAATTTTCTT

mRNA sequence

TGCATATGAATCACAAGAATAAAAAAGAAAAAAAAAAAAAAAAAAAAGAAAATCATGACGAGGAAGAAAGTGAAGCTGGCTTACATTGTGAACGACTCCGCAAGAAAGGCGACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAGGTGAGTGAATTGAGCACCCTTTGCGGGATTGAGGCATGCGCCATCGTGTTTAGCCCCTACGATGCTCAGCCTGAGCTGTGGCCTTCCCCCATCGGCGTCCAGCGCGTTCTCTCTCAATTCAAGAAGATGCCCGAGATGGAGCAAAGCAAGAAAATGGTGAACCAGGAGACGTTTCTGCGGCAGAGGATCGCCAAGGCCAATGACCAACTGAAGAAGATGAGAAAGGACAACCGGGAGAAAGAGATGACGCGGCTTATGTTTCAAAGCCTCACCGCTGCCAAAGGCCTTCATGCACTCAACATGCTTGACTTGAACGACCTCACTTGGCTCATTGATCAAAATCTCAAAGACATTACTAAACGCATTGACTCTCTCAAGAAGCCTCCGCCCCACTCTCAGCCACACCCTCACCCTCACCCTCACCCTCAGCCGCCTCCCCCGCCCCAGACCGCCGCCTGGCTTATGGAGCTTGTCAGCCCTCAGGACCAAATGGGGTTCGTCGGGGATGACATGCTCTTGCCCTTCGGAGATCAAACTTATAGCCATAATAATGCAATGTGGTCAAATGCCTTTTTCCCTTAGCTTTCTGTAATTTTCTT

Coding sequence (CDS)

ATGACGAGGAAGAAAGTGAAGCTGGCTTACATTGTGAACGACTCCGCAAGAAAGGCGACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAGGTGAGTGAATTGAGCACCCTTTGCGGGATTGAGGCATGCGCCATCGTGTTTAGCCCCTACGATGCTCAGCCTGAGCTGTGGCCTTCCCCCATCGGCGTCCAGCGCGTTCTCTCTCAATTCAAGAAGATGCCCGAGATGGAGCAAAGCAAGAAAATGGTGAACCAGGAGACGTTTCTGCGGCAGAGGATCGCCAAGGCCAATGACCAACTGAAGAAGATGAGAAAGGACAACCGGGAGAAAGAGATGACGCGGCTTATGTTTCAAAGCCTCACCGCTGCCAAAGGCCTTCATGCACTCAACATGCTTGACTTGAACGACCTCACTTGGCTCATTGATCAAAATCTCAAAGACATTACTAAACGCATTGACTCTCTCAAGAAGCCTCCGCCCCACTCTCAGCCACACCCTCACCCTCACCCTCACCCTCAGCCGCCTCCCCCGCCCCAGACCGCCGCCTGGCTTATGGAGCTTGTCAGCCCTCAGGACCAAATGGGGTTCGTCGGGGATGACATGCTCTTGCCCTTCGGAGATCAAACTTATAGCCATAATAATGCAATGTGGTCAAATGCCTTTTTCCCTTAG

Protein sequence

MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPSPIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQSLTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP

Homology

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-51
Identity = 103/157 (65.61%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYI NDS+RKATFKKRK+GLMKKV ELSTLCGI ACAI++SPYD  PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA + L++ RKD+RE EMT +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLK 158
           L     +  LN++DLNDL ++I+Q LKD+ +RI+ L+
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILR 157

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy Swiss-Prot
Match: Q7XJK8 (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 75/167 (44.91%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 3   RKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPSPI 62
           ++K+KL+ I N  +RK TF KRK+G+ KK++EL TLCG+EACA+V+SP+++ PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  +QL+K+R +N   ++  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 AAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHP 170
               ++ L+  DL DL+  ID+ L  +T+RI+ L +    S   P P
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLP 168

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy Swiss-Prot
Match: O80805 (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-31
Identity = 75/167 (44.91%), Postives = 114/167 (68.26%), Query Frame = 0


Query: 3   RKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPSPI 62
           R K+KL++I NDS RK TF KRK+G++KK +EL TLCG++ACA++ SPY++  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  ++L+K+R +NR  ++  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 AAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHP 170
               +  L+  DL DL   +++ L  + +R++ LK+    S   P P
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESSSSVPPP 168

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy Swiss-Prot
Match: Q7XJK6 (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.7e-30
Identity = 69/155 (44.52%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 4   KKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPSPIG 63
           KKVKL+ I N+ +RK +F KRK G+ KK+ ELSTLCG++ACA+++SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQSLTA 123
            ++V S+F +MP   ++KKM++QET+L +RI KA +QLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKK 159
               +  +  DL DL   I+  L  +  RI+S+K+
Sbjct: 122 KMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIKE 156

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 7.8e-30
Identity = 67/155 (43.23%), Postives = 103/155 (66.45%), Query Frame = 0


Query: 4   KKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPSPIG 63
           KKVKL+ I N+ +RK +F KRK G+ KK+ ELSTLCG++ACA+++SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQSLTA 123
            ++V S+F +MP   +++KM++QET L +RI KA +QLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKK 159
               +  +  DL DL   ++  L  +  RI+S+K+
Sbjct: 122 KMSQYRYDAKDLQDLLSCMNLYLDQLNGRIESIKE 156

[Close]

BLAST of Cp4.1LG01g17530 vs. NCBI nr
Match: XP_023538956.1 (agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441 bits (1133), Expect = 7.96e-156
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ 180
           LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224

[Close]

BLAST of Cp4.1LG01g17530 vs. NCBI nr
Match: XP_022961458.1 (agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG6590517.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024050.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429 bits (1103), Expect = 2.78e-151
Identity = 221/224 (98.66%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ 180
           LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHP  QPPPPPQ
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHP--QPPPPPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           TAAWLMELVSPQDQMGFV DDMLLPFGDQTYSHNNAMWSNAFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVADDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of Cp4.1LG01g17530 vs. NCBI nr
Match: XP_022968841.1 (agamous-like MADS-box protein AGL80 [Cucurbita maxima])

HSP 1 Score: 428 bits (1101), Expect = 5.60e-151
Identity = 221/224 (98.66%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ 180
           LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPP SQPHPHPHP  QPPPPPQ
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPRSQPHPHPHP--QPPPPPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of Cp4.1LG01g17530 vs. NCBI nr
Match: XP_008450513.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0050967.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa] >TYK10313.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa])

HSP 1 Score: 377 bits (969), Expect = 7.64e-131
Identity = 201/226 (88.94%), Postives = 207/226 (91.59%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPP-- 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLKKP   S P P      Q PP   
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKP---SLPQPQAQAQAQAPPTTQ 180

Query: 181 PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]

BLAST of Cp4.1LG01g17530 vs. NCBI nr
Match: XP_004135760.1 (agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65990.1 hypothetical protein Csa_006882 [Cucumis sativus])

HSP 1 Score: 376 bits (966), Expect = 2.35e-130
Identity = 200/225 (88.89%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPP-P 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLK  P  SQP        Q PP  P
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAPPTQP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy TrEMBL
Match: A0A6J1HBW4 (agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC111462033 PE=4 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 1.34e-151
Identity = 221/224 (98.66%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ 180
           LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHP  QPPPPPQ
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHP--QPPPPPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           TAAWLMELVSPQDQMGFV DDMLLPFGDQTYSHNNAMWSNAFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVADDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy TrEMBL
Match: A0A6J1HW01 (agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111467976 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 2.71e-151
Identity = 221/224 (98.66%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ 180
           LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPP SQPHPHPHP  QPPPPPQ
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPRSQPHPHPHP--QPPPPPQ 180

Query: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy TrEMBL
Match: A0A5A7U988 (Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004670 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 3.70e-131
Identity = 201/226 (88.94%), Postives = 207/226 (91.59%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPP-- 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLKKP   S P P      Q PP   
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKP---SLPQPQAQAQAQAPPTTQ 180

Query: 181 PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy TrEMBL
Match: A0A1S3BPF2 (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 3.70e-131
Identity = 201/226 (88.94%), Postives = 207/226 (91.59%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPP-- 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLKKP   S P P      Q PP   
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKP---SLPQPQAQAQAQAPPTTQ 180

Query: 181 PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]

BLAST of Cp4.1LG01g17530 vs. ExPASy TrEMBL
Match: A0A0A0LVS3 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE=4 SV=1)

HSP 1 Score: 376 bits (966), Expect = 1.14e-130
Identity = 200/225 (88.89%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPP-P 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLK  P  SQP        Q PP  P
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAPPTQP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224
           QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]

BLAST of Cp4.1LG01g17530 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 103/157 (65.61%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKKVKLAYI NDS+RKATFKKRK+GLMKKV ELSTLCGI ACAI++SPYD  PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA + L++ RKD+RE EMT +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLK 158
           L     +  LN++DLNDL ++I+Q LKD+ +RI+ L+
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILR 157

[Close]

BLAST of Cp4.1LG01g17530 vs. TAIR 10
Match: AT5G26630.1 (MADS-box transcription factor family protein )

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-39
Identity = 79/158 (50.00%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTR+KVK+ +I N++ARK+TFKKRK+GL+KK  EL  LCG+   A+V SPY+  PE+WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
                +V+SQ+K M  M+++KKMVNQETFL+QRI KA +  KK+RK+N+E EM  +MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKK 159
           L+    + ++   +L D  ++I+Q LKD+ +RI+ LK+
Sbjct: 121 LSGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKR 158

[Close]

BLAST of Cp4.1LG01g17530 vs. TAIR 10
Match: AT3G05860.1 (MADS-box transcription factor family protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33
Identity = 77/151 (50.99%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKK+ L+YI N+S RKATF KRK+GL+KK+ ELS LCGIEACA+++SP+++ PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  +   K   DN E+ M   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LTAAKGLHALNMLDLN--DLTWLIDQNLKDI 150
           L + KG   LN+ D N  DL   IDQ LK++
Sbjct: 121 LLSGKG-EKLNLTDRNREDLCKYIDQYLKEL 149

[Close]

BLAST of Cp4.1LG01g17530 vs. TAIR 10
Match: AT3G05860.2 (MADS-box transcription factor family protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33
Identity = 77/151 (50.99%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKK+ L+YI N+S RKATF KRK+GL+KK+ ELS LCGIEACA+++SP+++ PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  +   K   DN E+ M   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LTAAKGLHALNMLDLN--DLTWLIDQNLKDI 150
           L + KG   LN+ D N  DL   IDQ LK++
Sbjct: 121 LLSGKG-EKLNLTDRNREDLCKYIDQYLKEL 149

[Close]

BLAST of Cp4.1LG01g17530 vs. TAIR 10
Match: AT3G05860.3 (MADS-box transcription factor family protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33
Identity = 77/151 (50.99%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60
           MTRKK+ L+YI N+S RKATF KRK+GL+KK+ ELS LCGIEACA+++SP+++ PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  +   K   DN E+ M   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LTAAKGLHALNMLDLN--DLTWLIDQNLKDI 150
           L + KG   LN+ D N  DL   IDQ LK++
Sbjct: 121 LLSGKG-EKLNLTDRNREDLCKYIDQYLKEL 149

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJK3	1.6e-51	65.61	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q7XJK8	1.1e-31	44.91	MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P...	[more]
O80805	5.4e-31	44.91	MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P...	[more]
Q7XJK6	2.7e-30	44.52	Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=...	[more]
Q7XJK5	7.8e-30	43.23	Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=...	[more]

BLAST of Cp4.1LG01g17530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538956.1	7.96e-156	100.00	agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo]	[more]
XP_022961458.1	2.78e-151	98.66	agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG6590517.1 Agamous-l...	[more]
XP_022968841.1	5.60e-151	98.66	agamous-like MADS-box protein AGL80 [Cucurbita maxima]	[more]
XP_008450513.1	7.64e-131	88.94	PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0050967.1 agam...	[more]
XP_004135760.1	2.35e-130	88.89	agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65990.1 hypothetical p...	[more]

BLAST of Cp4.1LG01g17530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBW4	1.34e-151	98.66	agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC11146203...	[more]
A0A6J1HW01	2.71e-151	98.66	agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111467976 ...	[more]
A0A5A7U988	3.70e-131	88.94	Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BPF2	3.70e-131	88.94	agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4...	[more]
A0A0A0LVS3	1.14e-130	88.89	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE...	[more]

BLAST of Cp4.1LG01g17530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48670.1	1.1e-52	65.61	AGAMOUS-like 80	[more]
AT5G26630.1	4.2e-39	50.00	MADS-box transcription factor family protein	[more]
AT3G05860.1	3.5e-33	50.99	MADS-box transcription factor family protein	[more]
AT3G05860.2	3.5e-33	50.99	MADS-box transcription factor family protein	[more]
AT3G05860.3	3.5e-33	50.99	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..182
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..182
None	No IPR available	PANTHER	PTHR48019:SF17	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	coord: 1..182
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 39.48 coord: 38..59 score: 29.17 coord: 23..38 score: 62.47
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 3.8E-25 score: 99.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..51 e-value: 1.9E-18 score: 65.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..49 score: 17.43681
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..97 e-value: 6.4E-20 score: 73.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..95
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..85 e-value: 1.93887E-34 score: 116.205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17530.1	Cp4.1LG01g17530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding