Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTAACGATGAAAAATAATAGAGAACTAAAAGGAATGGTATATCATCATCCTCATCCTCATCAATAATTCCAGGCAAGATCATGTGACAAAAAGTGTGTCAGTGACAGACTGGTTTTGGCTGCTTCTTCTCTTTACTCTTCTACTGACTTGGTCGAGCTTTTCCGAGTTCTTCCCGACCGCCTCATTCCTTTCCTTCATTTCTTCATCTTCTTTCAATCTCCATCCTTAACCACTCCGACAGCCGCCGCTTTGTTCTTCAATCCACAATCATTATGGCTACATCCGATGAGGTGAGTTTTTCCTTAATCATTAATGGATGTGAAGATCGTTTGTTCATGTTCTTAGATTCTTGATCAATACCCACTTCTTAGTTTCTTCTATTTTTAACTTTAAACACCCTTCTCTGTGATATGTTTCATACTTCATTTGGGTAAGAGATCATTACCAACATCATGATAGATTAGAACAGAGCTATGGTTGATTCAATCTGTCAATTCCTTCACCAATATGTTATGGATTCTTACAGTTAATTAAGGCAATGGATGAGCCTCCTGTTTCTGAGAGGCCATCGAATGAACCCATTGGAGGAGAAGCAACAGAGCTGCCAGTTACTCCGTTCATGGAAAATGGTATAAAGGAGGAGTTCGATGCAGCTGACAATAAAGGAGAAGTGATACAAAAAGAGAGTCTGGAGGTTCCACAAAATGTAGAAGAACAAGCATCAGAGATTGTGGGCCTTGTTCCAAAAGCACAAGACGAATCATCAGTAATGGCAGAGTGTGGCAAGGGTCCAGCAGACAAGGAAGCAGAGAACAATGTTCCAGAACAACCTGATGAACCACAAAACAAAGAAGCTGAAGCGATTGAGGTTGTTCCAATGGAAGAAATGATTGGAACAGCTGAATCTCCAACACAACAGGAGTTTGTAAGTGCAGAGAAAGAGGCAAGTTGTGTTGTGGCAGAAGACACTACTGAATCCATTACAGCTTCCAAGAACAAAGAGCAGCAAAATGAAGAACATCCTGTGGTAGCAGGCAAGTCATTAGTTGATCTGATAGCACAAACCAAGATAGAAGAACCCCAAGTAGCAGGGCTTGAAGCTGCCAATGTACCTGAGGTGGAAGTAAAAGATGAACAAATTGTGAGCACAAAGGGAGAAGTGCCATCAAACCCCACTCATAAGCATTCGCACAATCTCTTATCCAAACTAAAACACTCATTGGTGAAGGCAAGGAAGGCCATCATTGGGAAGTCACCCACCTCAAAAACTCTTTCCTCCCAACCAAAGGATGATATTAAACTCAAGTGATGCTCTGCACTTAATAGCCAGATTCAGAGTTAAGTACTTATCAGAATATATGTTGTGAGGATTGGATTTTTTTTTGCATAGTTTCTTATAGTTGCGATGTAAAATTTGATATTATACCGTCATGTGTACATCGATTTCAAATTTGTGGATTTTGTGTGTGAAGTGATAAAGGTATTACTTAGCGTGTTGTCTGTGGCTACATGTTGGATGTTTCAATCATGTTTGTTCTCTGTTGGTACGAGGCCTTTTAGGGAAG
mRNA sequence
TGTAACGATGAAAAATAATAGAGAACTAAAAGGAATGGTATATCATCATCCTCATCCTCATCAATAATTCCAGGCAAGATCATGTGACAAAAAGTGTGTCAGTGACAGACTGGTTTTGGCTGCTTCTTCTCTTTACTCTTCTACTGACTTGGTCGAGCTTTTCCGAGTTCTTCCCGACCGCCTCATTCCTTTCCTTCATTTCTTCATCTTCTTTCAATCTCCATCCTTAACCACTCCGACAGCCGCCGCTTTGTTCTTCAATCCACAATCATTATGGCTACATCCGATGAGTTAATTAAGGCAATGGATGAGCCTCCTGTTTCTGAGAGGCCATCGAATGAACCCATTGGAGGAGAAGCAACAGAGCTGCCAGTTACTCCGTTCATGGAAAATGGTATAAAGGAGGAGTTCGATGCAGCTGACAATAAAGGAGAAGTGATACAAAAAGAGAGTCTGGAGGTTCCACAAAATGTAGAAGAACAAGCATCAGAGATTGTGGGCCTTGTTCCAAAAGCACAAGACGAATCATCAGTAATGGCAGAGTGTGGCAAGGGTCCAGCAGACAAGGAAGCAGAGAACAATGTTCCAGAACAACCTGATGAACCACAAAACAAAGAAGCTGAAGCGATTGAGGTTGTTCCAATGGAAGAAATGATTGGAACAGCTGAATCTCCAACACAACAGGAGTTTGTAAGTGCAGAGAAAGAGGCAAGTTGTGTTGTGGCAGAAGACACTACTGAATCCATTACAGCTTCCAAGAACAAAGAGCAGCAAAATGAAGAACATCCTGTGGTAGCAGGCAAGTCATTAGTTGATCTGATAGCACAAACCAAGATAGAAGAACCCCAAGTAGCAGGGCTTGAAGCTGCCAATGTACCTGAGGTGGAAGTAAAAGATGAACAAATTGTGAGCACAAAGGGAGAAGTGCCATCAAACCCCACTCATAAGCATTCGCACAATCTCTTATCCAAACTAAAACACTCATTGGTGAAGGCAAGGAAGGCCATCATTGGGAAGTCACCCACCTCAAAAACTCTTTCCTCCCAACCAAAGGATGATATTAAACTCAAGTGATGCTCTGCACTTAATAGCCAGATTCAGAGTTAAGTACTTATCAGAATATATGTTGTGAGGATTGGATTTTTTTTTGCATAGTTTCTTATAGTTGCGATGTAAAATTTGATATTATACCGTCATGTGTACATCGATTTCAAATTTGTGGATTTTGTGTGTGAAGTGATAAAGGTATTACTTAGCGTGTTGTCTGTGGCTACATGTTGGATGTTTCAATCATGTTTGTTCTCTGTTGGTACGAGGCCTTTTAGGGAAG
Coding sequence (CDS)
ATGGCTACATCCGATGAGTTAATTAAGGCAATGGATGAGCCTCCTGTTTCTGAGAGGCCATCGAATGAACCCATTGGAGGAGAAGCAACAGAGCTGCCAGTTACTCCGTTCATGGAAAATGGTATAAAGGAGGAGTTCGATGCAGCTGACAATAAAGGAGAAGTGATACAAAAAGAGAGTCTGGAGGTTCCACAAAATGTAGAAGAACAAGCATCAGAGATTGTGGGCCTTGTTCCAAAAGCACAAGACGAATCATCAGTAATGGCAGAGTGTGGCAAGGGTCCAGCAGACAAGGAAGCAGAGAACAATGTTCCAGAACAACCTGATGAACCACAAAACAAAGAAGCTGAAGCGATTGAGGTTGTTCCAATGGAAGAAATGATTGGAACAGCTGAATCTCCAACACAACAGGAGTTTGTAAGTGCAGAGAAAGAGGCAAGTTGTGTTGTGGCAGAAGACACTACTGAATCCATTACAGCTTCCAAGAACAAAGAGCAGCAAAATGAAGAACATCCTGTGGTAGCAGGCAAGTCATTAGTTGATCTGATAGCACAAACCAAGATAGAAGAACCCCAAGTAGCAGGGCTTGAAGCTGCCAATGTACCTGAGGTGGAAGTAAAAGATGAACAAATTGTGAGCACAAAGGGAGAAGTGCCATCAAACCCCACTCATAAGCATTCGCACAATCTCTTATCCAAACTAAAACACTCATTGGTGAAGGCAAGGAAGGCCATCATTGGGAAGTCACCCACCTCAAAAACTCTTTCCTCCCAACCAAAGGATGATATTAAACTCAAGTGA
Protein sequence
MATSDELIKAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKESLEVPQNVEEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIEVVPMEEMIGTAESPTQQEFVSAEKEASCVVAEDTTESITASKNKEQQNEEHPVVAGKSLVDLIAQTKIEEPQVAGLEAANVPEVEVKDEQIVSTKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPKDDIKLK
Homology
BLAST of Cp4.1LG01g17520 vs. NCBI nr
Match:
XP_023538882.1 (uncharacterized protein LOC111799674 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 494 bits (1273), Expect = 9.15e-176
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
Query: 1 MATSDELIKAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKES 60
MATSDELIKAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKES
Sbjct: 1 MATSDELIKAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKES 60
Query: 61 LEVPQNVEEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIE 120
LEVPQNVEEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIE
Sbjct: 61 LEVPQNVEEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIE 120
Query: 121 VVPMEEMIGTAESPTQQEFVSAEKEASCVVAEDTTESITASKNKEQQNEEHPVVAGKSLV 180
VVPMEEMIGTAESPTQQEFVSAEKEASCVVAEDTTESITASKNKEQQNEEHPVVAGKSLV
Sbjct: 121 VVPMEEMIGTAESPTQQEFVSAEKEASCVVAEDTTESITASKNKEQQNEEHPVVAGKSLV 180
Query: 181 DLIAQTKIEEPQVAGLEAANVPEVEVKDEQIVSTKGEVPSNPTHKHSHNLLSKLKHSLVK 240
DLIAQTKIEEPQVAGLEAANVPEVEVKDEQIVSTKGEVPSNPTHKHSHNLLSKLKHSLVK
Sbjct: 181 DLIAQTKIEEPQVAGLEAANVPEVEVKDEQIVSTKGEVPSNPTHKHSHNLLSKLKHSLVK 240
Query: 241 ARKAIIGKSPTSKTLSSQPKDDIKLK 266
ARKAIIGKSPTSKTLSSQPKDDIKLK
Sbjct: 241 ARKAIIGKSPTSKTLSSQPKDDIKLK 266
BLAST of Cp4.1LG01g17520 vs. NCBI nr
Match:
KAG6590518.1 (hypothetical protein SDJN03_15941, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 386 bits (992), Expect = 8.54e-132
Identity = 228/297 (76.77%), Postives = 239/297 (80.47%), Query Frame = 0
Query: 9 KAMD-EPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKESLEVPQNV 68
KA+D EPPVS+RPS+EPI GEATELPV FME GIKEE+DAADNKGEVIQKESLEV QNV
Sbjct: 49 KAVDNEPPVSDRPSHEPIVGEATELPVIAFMEKGIKEEYDAADNKGEVIQKESLEVLQNV 108
Query: 69 EEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIEVVPMEEM 128
EEQASEIVGLVPKA+DESSVMAECGKGPAD E E+ E E QNKEAEAIEVVPMEEM
Sbjct: 109 EEQASEIVGLVPKAEDESSVMAECGKGPADTEEEDK--EADKEAQNKEAEAIEVVPMEEM 168
Query: 129 IGTAESPTQQE---------------------------FVSAEKEASCVVAE-------- 188
IGTAE+PT QE FVSAEKE SCVVAE
Sbjct: 169 IGTAEAPTPQEQAVDKELEEVIAKEISIPTEVIEPSTEFVSAEKEPSCVVAESAETPLKL 228
Query: 189 ---DTTESITASKNKEQQNEEHPVVAGKSLVDLIAQTKIEEPQVAGLEAANVPEVEVKDE 248
DTTESITASKNKEQQNEEHPVVAGKSLVDLI +TKIEEPQVAGLEAANVPEVEVKDE
Sbjct: 229 IAEDTTESITASKNKEQQNEEHPVVAGKSLVDLITETKIEEPQVAGLEAANVPEVEVKDE 288
Query: 249 QIVSTKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPKDDIKLK 266
Q+ STKGEVPSNPT KHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQP+DDIK+K
Sbjct: 289 QVASTKGEVPSNPTQKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPRDDIKVK 343
BLAST of Cp4.1LG01g17520 vs. NCBI nr
Match:
XP_022961451.1 (muscle M-line assembly protein unc-89-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 385 bits (988), Expect = 2.63e-131
Identity = 228/304 (75.00%), Postives = 241/304 (79.28%), Query Frame = 0
Query: 1 MATSDELIKAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKES 60
+ATS+ +A+DEPPVSERPSNEPI GEATELPV F+E G KEEFDAADNKGEVIQKES
Sbjct: 36 LATSE--ARAVDEPPVSERPSNEPIVGEATELPVIAFLEKGTKEEFDAADNKGEVIQKES 95
Query: 61 LEVPQNVEEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIE 120
LEV QNVEEQASEIVGLVPKAQ+ESSV AECGK PAD E E+ E E QNKEAEAIE
Sbjct: 96 LEVLQNVEEQASEIVGLVPKAQEESSVTAECGKAPADTEEEDK--EADKEAQNKEAEAIE 155
Query: 121 VVPMEEMIGTAESPTQQE---------------------------FVSAEKEASCVVAE- 180
VVPMEEMIGTAE+PT +E FVSAEKEASCVVAE
Sbjct: 156 VVPMEEMIGTAEAPTPKEQAVDKELEEVIAKEISIPTEVIEPSTEFVSAEKEASCVVAES 215
Query: 181 ----------DTTESITASKNKEQQNEEHPVVAGKSLVDLIAQTKIEEPQVAGLEAANVP 240
DTTESITASKNKEQQNEEHPVVAGKSLVDLIA+TKIEEPQVAGLE ANV
Sbjct: 216 AETPLKVIAEDTTESITASKNKEQQNEEHPVVAGKSLVDLIAETKIEEPQVAGLEGANVS 275
Query: 241 EVEVKDEQIVSTKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPKDD 266
EVEVKDEQ+ STKGEVPSNPT KHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQP+DD
Sbjct: 276 EVEVKDEQVASTKGEVPSNPTQKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPRDD 335
BLAST of Cp4.1LG01g17520 vs. NCBI nr
Match:
KAG7024053.1 (hypothetical protein SDJN02_15082 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 365 bits (938), Expect = 6.46e-124
Identity = 213/280 (76.07%), Postives = 228/280 (81.43%), Query Frame = 0
Query: 9 KAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKESLEVPQNVE 68
+A+DEPPVSERPSNEPI GEATELPV F+E G KEEFDAADNKGEVIQKESLEV QNVE
Sbjct: 42 RAVDEPPVSERPSNEPIVGEATELPVIAFLEKGTKEEFDAADNKGEVIQKESLEVLQNVE 101
Query: 69 EQASEIVGLVPKAQDESSVMAECGKGPAD-------KEAENNVPEQPDEPQNKEAEAIEV 128
EQASEIVGLVPKAQDESSVMAE K PAD KEAENN P++ EPQ KE A+E
Sbjct: 102 EQASEIVGLVPKAQDESSVMAESSKAPADAEEERAPKEAENNGPKEAVEPQEKEGAAMEE 161
Query: 129 VPMEEMIGTAESPTQQEFVSAEK----EASCVVAE-----------DTTESITASKNKEQ 188
V +E+ E+P ++E E E SCVVAE DTTESITASKNKEQ
Sbjct: 162 VIAKEISMPTEAPKEKEEAGEESREVIETSCVVAESAETPLKLIAEDTTESITASKNKEQ 221
Query: 189 QNEEHPVVAGKSLVDLIAQTKIEEPQVAGLEAANVPEVEVKDEQIVSTKGEVPSNPTHKH 248
QNEEHPVVAGKSLVDLIA+TKIEEPQVAGLEAANVPEVEVKDEQ+ STKGEVPSNPTHKH
Sbjct: 222 QNEEHPVVAGKSLVDLIAETKIEEPQVAGLEAANVPEVEVKDEQVASTKGEVPSNPTHKH 281
Query: 249 SHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPKDDIKLK 266
SHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQP+DDIK+K
Sbjct: 282 SHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPRDDIKVK 321
BLAST of Cp4.1LG01g17520 vs. NCBI nr
Match:
XP_022961453.1 (uncharacterized protein LOC111462030 isoform X2 [Cucurbita moschata])
HSP 1 Score: 360 bits (923), Expect = 1.27e-121
Identity = 214/293 (73.04%), Postives = 228/293 (77.82%), Query Frame = 0
Query: 1 MATSDELIKAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKES 60
+ATS+ +A+DEPPVSERPSNEPI GEATELPV F+E G KEEFDAADNKGEVIQKES
Sbjct: 36 LATSE--ARAVDEPPVSERPSNEPIVGEATELPVIAFLEKGTKEEFDAADNKGEVIQKES 95
Query: 61 LEVPQNVEEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIE 120
LEV QNVEEQASEIVGLVPKAQ+ESSV AECGK PAD E E+ E E QNKEAEAIE
Sbjct: 96 LEVLQNVEEQASEIVGLVPKAQEESSVTAECGKAPADTEEEDK--EADKEAQNKEAEAIE 155
Query: 121 VVPMEEMIGTAESPTQQE---------------------------FVSAEKEASCVVAED 180
VVPMEEMIGTAE+PT +E FVSAEKEASCVVAE
Sbjct: 156 VVPMEEMIGTAEAPTPKEQAVDKELEEVIAKEISIPTEVIEPSTEFVSAEKEASCVVAES 215
Query: 181 TTESITASKNKEQQNEEHPVVAGKSLVDLIAQTKIEEPQVAGLEAANVPEVEVKDEQIVS 240
+ E NEEHPVVAGKSLVDLIA+TKIEEPQVAGLE ANV EVEVKDEQ+ S
Sbjct: 216 AETPLKVIA--EDTNEEHPVVAGKSLVDLIAETKIEEPQVAGLEGANVSEVEVKDEQVAS 275
Query: 241 TKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPKDDIKLK 266
TKGEVPSNPT KHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQP+DDIK+K
Sbjct: 276 TKGEVPSNPTQKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPRDDIKVK 322
BLAST of Cp4.1LG01g17520 vs. ExPASy TrEMBL
Match:
A0A6J1HAE5 (muscle M-line assembly protein unc-89-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462030 PE=4 SV=1)
HSP 1 Score: 385 bits (988), Expect = 1.27e-131
Identity = 228/304 (75.00%), Postives = 241/304 (79.28%), Query Frame = 0
Query: 1 MATSDELIKAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKES 60
+ATS+ +A+DEPPVSERPSNEPI GEATELPV F+E G KEEFDAADNKGEVIQKES
Sbjct: 36 LATSE--ARAVDEPPVSERPSNEPIVGEATELPVIAFLEKGTKEEFDAADNKGEVIQKES 95
Query: 61 LEVPQNVEEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIE 120
LEV QNVEEQASEIVGLVPKAQ+ESSV AECGK PAD E E+ E E QNKEAEAIE
Sbjct: 96 LEVLQNVEEQASEIVGLVPKAQEESSVTAECGKAPADTEEEDK--EADKEAQNKEAEAIE 155
Query: 121 VVPMEEMIGTAESPTQQE---------------------------FVSAEKEASCVVAE- 180
VVPMEEMIGTAE+PT +E FVSAEKEASCVVAE
Sbjct: 156 VVPMEEMIGTAEAPTPKEQAVDKELEEVIAKEISIPTEVIEPSTEFVSAEKEASCVVAES 215
Query: 181 ----------DTTESITASKNKEQQNEEHPVVAGKSLVDLIAQTKIEEPQVAGLEAANVP 240
DTTESITASKNKEQQNEEHPVVAGKSLVDLIA+TKIEEPQVAGLE ANV
Sbjct: 216 AETPLKVIAEDTTESITASKNKEQQNEEHPVVAGKSLVDLIAETKIEEPQVAGLEGANVS 275
Query: 241 EVEVKDEQIVSTKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPKDD 266
EVEVKDEQ+ STKGEVPSNPT KHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQP+DD
Sbjct: 276 EVEVKDEQVASTKGEVPSNPTQKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPRDD 335
BLAST of Cp4.1LG01g17520 vs. ExPASy TrEMBL
Match:
A0A6J1HBV9 (uncharacterized protein LOC111462030 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462030 PE=4 SV=1)
HSP 1 Score: 360 bits (923), Expect = 6.16e-122
Identity = 214/293 (73.04%), Postives = 228/293 (77.82%), Query Frame = 0
Query: 1 MATSDELIKAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKES 60
+ATS+ +A+DEPPVSERPSNEPI GEATELPV F+E G KEEFDAADNKGEVIQKES
Sbjct: 36 LATSE--ARAVDEPPVSERPSNEPIVGEATELPVIAFLEKGTKEEFDAADNKGEVIQKES 95
Query: 61 LEVPQNVEEQASEIVGLVPKAQDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIE 120
LEV QNVEEQASEIVGLVPKAQ+ESSV AECGK PAD E E+ E E QNKEAEAIE
Sbjct: 96 LEVLQNVEEQASEIVGLVPKAQEESSVTAECGKAPADTEEEDK--EADKEAQNKEAEAIE 155
Query: 121 VVPMEEMIGTAESPTQQE---------------------------FVSAEKEASCVVAED 180
VVPMEEMIGTAE+PT +E FVSAEKEASCVVAE
Sbjct: 156 VVPMEEMIGTAEAPTPKEQAVDKELEEVIAKEISIPTEVIEPSTEFVSAEKEASCVVAES 215
Query: 181 TTESITASKNKEQQNEEHPVVAGKSLVDLIAQTKIEEPQVAGLEAANVPEVEVKDEQIVS 240
+ E NEEHPVVAGKSLVDLIA+TKIEEPQVAGLE ANV EVEVKDEQ+ S
Sbjct: 216 AETPLKVIA--EDTNEEHPVVAGKSLVDLIAETKIEEPQVAGLEGANVSEVEVKDEQVAS 275
Query: 241 TKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPKDDIKLK 266
TKGEVPSNPT KHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQP+DDIK+K
Sbjct: 276 TKGEVPSNPTQKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPRDDIKVK 322
BLAST of Cp4.1LG01g17520 vs. ExPASy TrEMBL
Match:
A0A6J1HYB7 (actin cytoskeleton-regulatory complex protein pan1-like OS=Cucurbita maxima OX=3661 GN=LOC111467975 PE=4 SV=1)
HSP 1 Score: 337 bits (864), Expect = 1.14e-112
Identity = 212/310 (68.39%), Postives = 226/310 (72.90%), Query Frame = 0
Query: 9 KAMDEPPVSERPSNEPIGGEATELPVTPFMENGIKEEFDAADNKGEVIQKESLEVPQNVE 68
KA+DEPP+ ERPSNEPI GEA ELPV FME GIKEE+DAA+ GEVIQKESLEV QNVE
Sbjct: 43 KAVDEPPIPERPSNEPIVGEAPELPVIAFMEQGIKEEYDAAE--GEVIQKESLEVLQNVE 102
Query: 69 EQASEIVGLVPKAQDESSVMAECGKGPAD---------KEAENNVPEQPDEPQNKEAEAI 128
EQASEIV LVPKAQDESSVMAECGKGPAD KEAENNVPEQP EPQNKEAEAI
Sbjct: 103 EQASEIVSLVPKAQDESSVMAECGKGPADAEEEETEADKEAENNVPEQPVEPQNKEAEAI 162
Query: 129 EVVPMEEMIGTAESPTQQE----------------------------------------- 188
EV+PMEEMIGTAE+ TQ+E
Sbjct: 163 EVLPMEEMIGTAEASTQKEQAVDKELEEVIAKEISIPTEAPKEKEQARAESREVIEPSTE 222
Query: 189 FVSAEKEASCVVAE--DTTESITASKNKEQQNEEHPVVAGKSLVDLIAQTKIEEPQVAGL 248
FVSAEKE SCVVAE +T + A E Q PVVAGKSLVDLIA+TKIEEPQVAGL
Sbjct: 223 FVSAEKEPSCVVAESAETPLKVIAEDTYETQ----PVVAGKSLVDLIAETKIEEPQVAGL 282
Query: 249 EAANVPEVEVKDEQIVSTKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLS 266
AANV E++VKDEQIVSTKG SNPT KHSHNLLSKLKHSLVKARKAIIGKSPTSKTLS
Sbjct: 283 GAANVSELQVKDEQIVSTKG---SNPTQKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLS 342
BLAST of Cp4.1LG01g17520 vs. ExPASy TrEMBL
Match:
A0A1S3BQ15 (titin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492092 PE=4 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 1.45e-17
Identity = 63/126 (50.00%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 173 VVAGKSL--------VDLIAQTKIEEP----QVAGLEAANVP-----------EVEVKDE 232
VVAGKS+ DLIA+TK+EE ++A +E N E+EVKD+
Sbjct: 1162 VVAGKSIDDQKAGEVADLIAETKVEESITDEKLAPVETVNAQVNETPKEPQELELEVKDK 1221
Query: 233 QIV---------STKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPK 266
+ V + K EVPS P+HKHSHN+LSK+K SLVKA+KAIIGKSP+SKTLSS+ +
Sbjct: 1222 ENVREEAEVPKVNDKKEVPSKPSHKHSHNILSKVKQSLVKAKKAIIGKSPSSKTLSSEAR 1281
BLAST of Cp4.1LG01g17520 vs. ExPASy TrEMBL
Match:
A0A1S3BPB8 (titin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492092 PE=4 SV=1)
HSP 1 Score: 93.2 bits (230), Expect = 1.45e-17
Identity = 63/126 (50.00%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 173 VVAGKSL--------VDLIAQTKIEEP----QVAGLEAANVP-----------EVEVKDE 232
VVAGKS+ DLIA+TK+EE ++A +E N E+EVKD+
Sbjct: 1169 VVAGKSIDDQKAGEVADLIAETKVEESITDEKLAPVETVNAQVNETPKEPQELELEVKDK 1228
Query: 233 QIV---------STKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSSQPK 266
+ V + K EVPS P+HKHSHN+LSK+K SLVKA+KAIIGKSP+SKTLSS+ +
Sbjct: 1229 ENVREEAEVPKVNDKKEVPSKPSHKHSHNILSKVKQSLVKAKKAIIGKSPSSKTLSSEAR 1288
BLAST of Cp4.1LG01g17520 vs. TAIR 10
Match:
AT3G05900.1 (neurofilament protein-related )
HSP 1 Score: 52.4 bits (124), Expect = 6.6e-07
Identity = 72/235 (30.64%), Postives = 118/235 (50.21%), Query Frame = 0
Query: 62 EVPQNVEEQASEIVGLVPKA-QDESSVMAECGKGPADKEAENNVPEQPDEPQNKEAEAIE 121
E + EE S ++ KA +E V+ E K E+ + + + P N+++ +
Sbjct: 445 EPKKETEEDVSSPADIIEKAITEEKHVVEEPSKDEKTSESGSALSPEKVVPTNQDS---D 504
Query: 122 VVPMEEMIGTAESP--------TQQEFVSAE----KEASCVVAEDTTESITASKNKEQQN 181
P +E G SP T ++ V E ++ + A+D + A +++
Sbjct: 505 TEPKKETEGDVPSPADVIEKAITDEKHVVEEPLKDEQENVSEAKDVVTKLAAEDENIKKD 564
Query: 182 EEHPVVAGKSLVDL-----------IAQTKIEEP---QVAG-LEAANVPEV--EVKDEQI 241
+ PV GKS L A K EEP +VA +E A V + E K +
Sbjct: 565 TDTPVAEGKSEETLKETDTESVEKEAAANKQEEPITEKVAEVVETAPVAKEIDEAKQQPE 624
Query: 242 VSTKGEVPSNPTHKHSHNLLSKLKHSLVKARKAIIGKSPTSKTLSS-QPKDDIKL 266
V+TK E P+ KHS++++SK+K SLVKA+KAIIG+SP+SKT+++ +PK++IK+
Sbjct: 625 VTTK-EAPAK--QKHSNSIISKVKQSLVKAKKAIIGRSPSSKTITTEEPKEEIKV 673
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023538882.1 | 9.15e-176 | 100.00 | uncharacterized protein LOC111799674 [Cucurbita pepo subsp. pepo] | [more] |
KAG6590518.1 | 8.54e-132 | 76.77 | hypothetical protein SDJN03_15941, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022961451.1 | 2.63e-131 | 75.00 | muscle M-line assembly protein unc-89-like isoform X1 [Cucurbita moschata] | [more] |
KAG7024053.1 | 6.46e-124 | 76.07 | hypothetical protein SDJN02_15082 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022961453.1 | 1.27e-121 | 73.04 | uncharacterized protein LOC111462030 isoform X2 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HAE5 | 1.27e-131 | 75.00 | muscle M-line assembly protein unc-89-like isoform X1 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1HBV9 | 6.16e-122 | 73.04 | uncharacterized protein LOC111462030 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1HYB7 | 1.14e-112 | 68.39 | actin cytoskeleton-regulatory complex protein pan1-like OS=Cucurbita maxima OX=3... | [more] |
A0A1S3BQ15 | 1.45e-17 | 50.00 | titin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492092 PE=4 SV=1 | [more] |
A0A1S3BPB8 | 1.45e-17 | 50.00 | titin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492092 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G05900.1 | 6.6e-07 | 30.64 | neurofilament protein-related | [more] |