Cp4.1LG01g17460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCGGAAGAAATTTGGTGGGCAGCGTGTAAAGGCAACAGCGTGTCCCTCGGCGATTAATCTGATCAATCTAAGTCCTCTTCGTTTATCTCCAAATCTGTTTGACCTTCTTCTTCTTCTAACTTCCGCTCCTTCCGCTCCTTCCGCTCACTCTGCTCCCACTGCCCTTCTCATCTCTTTCAGGTTAATTTCTCTCCTTCTCTTCTGCATTTCATTTTTCTACTTTCATTTTTTTCTATTTTGATTTTGTTGCTGTTCTTCTGTTTGATCTTCTCTTCGTTTCTCTTTTTATCTCTTGGATCTTCTTCCGATCTGTTTGTTTGACTTATCCGATCTCCACTTTATCTTAACATTTAACCCGATCCTTCTCTTCATACTCAAGTTTAGATCCCTTATTGGTTGCATTTCAAGTTTCTCTTCTGCAAATCCCACAATTGTTGATGCTTTTTATATCCTTTCTTCAGATCCACTGTTTTCTTTGTTAATGTTTAATTAATTTGGTCGAGTTTTAGAAATTTTCAACATACATGTTCTTCGCAGGACAAGAAATTAACCTCCCTTGTAACTTATGACTACATGATGATATTTGATTCTGAAACCAAAGCTCTGAGTCTCTACAATTTTGTTTCACCTTTCTGAGGCAACTATGCATTTACTTTTTCATCTTTGAAATTGTACCAAGTAATAAATCTGAGAATTGTTCTAAATTTGTGCATTTGTAATTTACATTGAAGTTATGGCGTCTTCTGATAAACCTGAGATCGTGGAAAGGGGAGATAAAGAAAAAGACCAAAAGAAAGATGAAAATGAAGGGAAGGGTGGATTCATGGACAAAGTGAAAGATTTCATTCATGACATCAGCGAGAAGATTGAAGAAGCGATCGGTTTCGGGAAGCCGACTGCAGATGTTGCTGCAATTCATATTCCATCCATCAATCTTGAGAAGGCTGAGATTGTTGTTGATGTTCTGATTAAAAATCCTAATCCTGTTCCCATTCCCCTAATTGACATTGACTACTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGGTTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAAACTGTCAAAATTCCTGTGAAGTTGGTTTATGATGATATAAAGAACACATATCATGACATTAAACCTGGCAGTATCATTCCTTACAGAATCAAGGTTGATCTCATTGTAGACGTGCCTGTTTTTGGGAGACTCACACTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGATGTCGATATCGAGAAGATTCGTTTCGATAGATTCTCGTTTGAAGAAACTGTTGCCATTCTCCACTTGAAATTGGAAAATAAGAATGACTTTGAGTTGGGATTGAAGGACATAGACTGTGAAGTTTGGCTCTCTGATGTTAGTATTGGACGTGCGGATCTCTCCGAATTTACACCCATTGATAAAAATGGGATAAGTTACGTCGACTTGCCCATCACCTTCAGGCCTAAGGACTTCGGTTCGGCACTCTGGGATATGATCAGAGGAAGAGGGACTGGCTACACCATAAAAGGGAATGTTCATGTCGACACACCTTTCGGTGAGATGAAGCTGCCCATTGTTAAAGAGGGTGGTACTACTCGCCTCAAGAAGAATAATGAGGACGGTGATGAGGACGAGGACGAGGACGAGGTATGAGATATCTTCTTCTCTGTTGTAAGCTACTACCATGAGAAACTTTCAAGTTTCAAAAAGAAAATTCCACTTGATTGAAAATAGATTCTCTCTCTTGAAACTTCACACTGCTCCAATGCCTGCTATTATTCACTAACTCTCTAAAGTTCTTTGTATATAATTATTAACATTGAGAAAGCATATATAACCCCGAGTCGCCACAGATAATGGTTCATATTCTTATTCAAATAAGTTATTTAGACAACCTAAGTGAGGGCTTTTGTGAGTAGTGACTAGTGAGAGTAGAGGTTATGAATGAAAAAAGGTGAATTCTATTGCCCAAAATTTGTTTCTTTTGTCTGTGGAGACATTCATTCTTGTGTTATATGAAGTTGGTTGATGTTGTGGATGCAGGAATAAATAAAAGAGCATCATGTGGAGGAATATTGGATCGTTTTCTTCTTTCCTCTTATTAGAAAATGTATTATGATGTTGTTTCATAAACATGATATGGGATTGTTTCGCCCCAACTCTTGTTACTCAATTGTTATGGTATTGGCACTGACGTCGAATGGTGAGTTTCATGCTTGTGGAAAAAATTGATATTACTATTATCATCTTTTATTAGTTCCGGGATAAATTCTACTTTTATTTACATCTCTAACTTAGATATTTCATTTTGGTTCATTTTTTGGTTTTATATTACTAGTTTATTTTGGGATCTATGGTTTTTGATGTTGCTGTACAACTCCAACGATTTCGCCATCTATTTGTTGAGCAATTCTTGCAATTTCTCTGTTTG TATCGGAAGAAATTTGGTGGGCAGCGTGTAAAGGCAACAGCGTGTCCCTCGGCGATTAATCTGATCAATCTAAGTCCTCTTCGTTTATCTCCAAATCTGTTTGACCTTCTTCTTCTTCTAACTTCCGCTCCTTCCGCTCCTTCCGCTCACTCTGCTCCCACTGCCCTTCTCATCTCTTTCAGATGGCGTCTTCTGATAAACCTGAGATCGTGGAAAGGGGAGATAAAGAAAAAGACCAAAAGAAAGATGAAAATGAAGGGAAGGGTGGATTCATGGACAAAGTGAAAGATTTCATTCATGACATCAGCGAGAAGATTGAAGAAGCGATCGGTTTCGGGAAGCCGACTGCAGATGTTGCTGCAATTCATATTCCATCCATCAATCTTGAGAAGGCTGAGATTGTTGTTGATGTTCTGATTAAAAATCCTAATCCTGTTCCCATTCCCCTAATTGACATTGACTACTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGGTTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAAACTGTCAAAATTCCTGTGAAGTTGGTTTATGATGATATAAAGAACACATATCATGACATTAAACCTGGCAGTATCATTCCTTACAGAATCAAGGTTGATCTCATTGTAGACGTGCCTGTTTTTGGGAGACTCACACTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGATGTCGATATCGAGAAGATTCGTTTCGATAGATTCTCGTTTGAAGAAACTGTTGCCATTCTCCACTTGAAATTGGAAAATAAGAATGACTTTGAGTTGGGATTGAAGGACATAGACTGTGAAGTTTGGCTCTCTGATGTTAGTATTGGACGTGCGGATCTCTCCGAATTTACACCCATTGATAAAAATGGGATAAGTTACGTCGACTTGCCCATCACCTTCAGGCCTAAGGACTTCGGTTCGGCACTCTGGGATATGATCAGAGGAAGAGGGACTGGCTACACCATAAAAGGGAATGTTCATGTCGACACACCTTTCGGTGAGATGAAGCTGCCCATTGTTAAAGAGGGTGGTACTACTCGCCTCAAGAAGAATAATGAGGACGGTGATGAGGACGAGGACGAGGACGAGGTATGAGATATCTTCTTCTCTGTTGTAAGCTACTACCATGAGAAACTTTCAAGTTTCAAAAAGAAAATTCCACTTGATTGAAAATAGATTCTCTCTCTTGAAACTTCACACTGCTCCAATGCCTGCTATTATTCACTAACTCTCTAAAGTTCTTTGTATATAATTATTAACATTGAGAAAGCATATATAACCCCGAGTCGCCACAGATAATGGTTCATATTCTTATTCAAATAAGTTATTTAGACAACCTAAGTGAGGGCTTTTGTGAGTAGTGACTAGTGAGAGTAGAGGTTATGAATGAAAAAAGGTGAATTCTATTGCCCAAAATTTGTTTCTTTTGTCTGTGGAGACATTCATTCTTGTGTTATATGAAGTTGGTTGATGTTGTGGATGCAGGAATAAATAAAAGAGCATCATGTGGAGGAATATTGGATCGTTTTCTTCTTTCCTCTTATTAGAAAATGTATTATGATGTTGTTTCATAAACATGATATGGGATTGTTTCGCCCCAACTCTTGTTACTCAATTGTTATGGTATTGGCACTGACGTCGAATGGTGAGTTTCATGCTTGTGGAAAAAATTGATATTACTATTATCATCTTTTATTAGTTCCGGGATAAATTCTACTTTTATTTACATCTCTAACTTAGATATTTCATTTTGGTTCATTTTTTGGTTTTATATTACTAGTTTATTTTGGGATCTATGGTTTTTGATGTTGCTGTACAACTCCAACGATTTCGCCATCTATTTGTTGAGCAATTCTTGCAATTTCTCTGTTTG ATGGCGTCTTCTGATAAACCTGAGATCGTGGAAAGGGGAGATAAAGAAAAAGACCAAAAGAAAGATGAAAATGAAGGGAAGGGTGGATTCATGGACAAAGTGAAAGATTTCATTCATGACATCAGCGAGAAGATTGAAGAAGCGATCGGTTTCGGGAAGCCGACTGCAGATGTTGCTGCAATTCATATTCCATCCATCAATCTTGAGAAGGCTGAGATTGTTGTTGATGTTCTGATTAAAAATCCTAATCCTGTTCCCATTCCCCTAATTGACATTGACTACTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGGTTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAAACTGTCAAAATTCCTGTGAAGTTGGTTTATGATGATATAAAGAACACATATCATGACATTAAACCTGGCAGTATCATTCCTTACAGAATCAAGGTTGATCTCATTGTAGACGTGCCTGTTTTTGGGAGACTCACACTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGATGTCGATATCGAGAAGATTCGTTTCGATAGATTCTCGTTTGAAGAAACTGTTGCCATTCTCCACTTGAAATTGGAAAATAAGAATGACTTTGAGTTGGGATTGAAGGACATAGACTGTGAAGTTTGGCTCTCTGATGTTAGTATTGGACGTGCGGATCTCTCCGAATTTACACCCATTGATAAAAATGGGATAAGTTACGTCGACTTGCCCATCACCTTCAGGCCTAAGGACTTCGGTTCGGCACTCTGGGATATGATCAGAGGAAGAGGGACTGGCTACACCATAAAAGGGAATGTTCATGTCGACACACCTTTCGGTGAGATGAAGCTGCCCATTGTTAAAGAGGGTGGTACTACTCGCCTCAAGAAGAATAATGAGGACGGTGATGAGGACGAGGACGAGGACGAGGTATGA MASSDKPEIVERGDKEKDQKKDENEGKGGFMDKVKDFIHDISEKIEEAIGFGKPTADVAAIHIPSINLEKAEIVVDVLIKNPNPVPIPLIDIDYLIESDGRKLISGLIPDAGTIHAHGEETVKIPVKLVYDDIKNTYHDIKPGSIIPYRIKVDLIVDVPVFGRLTLPLEKTGEIPIPYKPDVDIEKIRFDRFSFEETVAILHLKLENKNDFELGLKDIDCEVWLSDVSIGRADLSEFTPIDKNGISYVDLPITFRPKDFGSALWDMIRGRGTGYTIKGNVHVDTPFGEMKLPIVKEGGTTRLKKNNEDGDEDEDEDEV Homology
BLAST of Cp4.1LG01g17460 vs. ExPASy Swiss-Prot
Match: P46519 (Desiccation protectant protein Lea14 homolog OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.4e-18 Identity = 46/152 (30.26%), Postives = 82/152 (53.95%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy Swiss-Prot
Match: P46518 (Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum OX=3635 GN=LEA14-A PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.7e-17 Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy Swiss-Prot
Match: O03983 (Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana OX=3702 GN=LEA14 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.3e-16 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy Swiss-Prot
Match: P22241 (Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.8e-14 Identity = 42/152 (27.63%), Postives = 80/152 (52.63%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy Swiss-Prot
Match: O82355 (Desiccation-related protein At2g46140 OS=Arabidopsis thaliana OX=3702 GN=At2g46140 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-12 Identity = 46/162 (28.40%), Postives = 75/162 (46.30%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. NCBI nr
Match: XP_023541449.1 (uncharacterized protein LOC111801625 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 632 bits (1629), Expect = 2.77e-228 Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. NCBI nr
Match: XP_023541457.1 (uncharacterized protein LOC111801625 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 629 bits (1622), Expect = 3.00e-227 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. NCBI nr
Match: XP_022929989.1 (uncharacterized protein LOC111436440 isoform X1 [Cucurbita moschata]) HSP 1 Score: 629 bits (1622), Expect = 6.57e-227 Identity = 315/316 (99.68%), Postives = 315/316 (99.68%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. NCBI nr
Match: XP_022929990.1 (uncharacterized protein LOC111436440 isoform X2 [Cucurbita moschata]) HSP 1 Score: 627 bits (1618), Expect = 1.22e-226 Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. NCBI nr
Match: KAG7032468.1 (hypothetical protein SDJN02_06516 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 626 bits (1615), Expect = 4.72e-226 Identity = 313/315 (99.37%), Postives = 314/315 (99.68%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy TrEMBL
Match: A0A6J1EQC7 (uncharacterized protein LOC111436440 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436440 PE=3 SV=1) HSP 1 Score: 629 bits (1622), Expect = 3.18e-227 Identity = 315/316 (99.68%), Postives = 315/316 (99.68%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy TrEMBL
Match: A0A6J1EVS6 (uncharacterized protein LOC111436440 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436440 PE=3 SV=1) HSP 1 Score: 627 bits (1618), Expect = 5.92e-227 Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy TrEMBL
Match: A0A6J1IGA4 (uncharacterized protein LOC111472629 OS=Cucurbita maxima OX=3661 GN=LOC111472629 PE=3 SV=1) HSP 1 Score: 625 bits (1613), Expect = 3.42e-226 Identity = 312/315 (99.05%), Postives = 314/315 (99.68%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy TrEMBL
Match: A0A0A0LID3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G151040 PE=3 SV=1) HSP 1 Score: 594 bits (1532), Expect = 7.61e-214 Identity = 291/315 (92.38%), Postives = 308/315 (97.78%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. ExPASy TrEMBL
Match: A0A1S3C527 (uncharacterized protein LOC103496938 OS=Cucumis melo OX=3656 GN=LOC103496938 PE=3 SV=1) HSP 1 Score: 593 bits (1528), Expect = 3.10e-213 Identity = 291/315 (92.38%), Postives = 307/315 (97.46%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. TAIR 10
Match: AT2G44060.1 (Late embryogenesis abundant protein, group 2 ) HSP 1 Score: 489.6 bits (1259), Expect = 1.9e-138 Identity = 235/322 (72.98%), Postives = 279/322 (86.65%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. TAIR 10
Match: AT2G44060.2 (Late embryogenesis abundant protein, group 2 ) HSP 1 Score: 489.6 bits (1259), Expect = 1.9e-138 Identity = 235/322 (72.98%), Postives = 279/322 (86.65%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. TAIR 10
Match: AT1G01470.1 (Late embryogenesis abundant protein ) HSP 1 Score: 86.7 bits (213), Expect = 3.8e-17 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 0
BLAST of Cp4.1LG01g17460 vs. TAIR 10
Match: AT2G46140.1 (Late embryogenesis abundant protein ) HSP 1 Score: 75.5 bits (184), Expect = 8.7e-14 Identity = 46/162 (28.40%), Postives = 75/162 (46.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|