Cp4.1LG01g17320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DNA-binding protein BIN4
Location	Cp4.1LG01: 12128276 .. 12134085 (-)
RNA-Seq Expression	Cp4.1LG01g17320
Synteny	Cp4.1LG01g17320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTCGGTGTTTGTGTTATTTCCTTTTATTTATTTTTAGAATAAAGAAAACCAAAATTTGAGGGAAAAAAAAAAGATCAAGCGGGCGCTGATTGAAATTTTGCCCCGTCCTACCTTTCTGGCGTTCCATTACATTTTCTGCTTCCGAAGGAGGAGGAAGATAGCGAGGAGGAGGGAGACAGCGCGCCGTCGTTTGTTCATTGTTTTTTTCCCATTACTCTGGTGCTGTCGTGCGGCCTCTCAAGATCAAGTGAGTGATTTTCTGTTCCTTTTCTGGCTTTTTCTTAGCACCTCATATTCAATTTCCCTTAACATCTGTATCGAAACATTCATTCGTATGTCTTTTCTATTAGTCTTCAACACTATTCAAAAGAAAAAAAAAGAAAAAAGAATGGAAACTTGTAAAGAGATTCTCCAGTGCTAAGTATTTGTTGTTTTCCCTAATCTCCAGATCTTCGTAATATGTTTAATTAGATGCTGTGGTCTCTAGAGTTGAGATAATGTTAAATCTGGCACTCTGTAAGGTCCTTCCAGCTGCATTCACCTTTTGATTTTCTCATTATTTTTCGGGTCTCCTGGTATACCATTCTACTATTTTAAGATCTGGAGAGCTGGTTTTTTAGGGCTTTCTTTAGAGTTTCTTGGATGGTCAATCAATTTGTTGATATATCAATTGGAAAGAACGCATCCATTACCTGTCTCGAGTTCTTGATGCACCTGTGAAGTCTTCATTCAACCCTTGGGTTCGTTTTTCTGACTTACTTGTCCGACTAGATACATAATGAGGGGCTCTGATACCAAATGTTGATTTTGATCCTCAATCAAAGCACACCGAAATGAAAAGCCGAAACAGAAAGAACAACTCGAGGGAGAGTTTTTTTGTACTAAAGAATTTTAATTACTATGCTTTTCAATTATTTTTGTTAATGTGAATAAAGGGTTATTTCTAAACTTACTTTACAGGTTAATAACTACTGACCATTCTCCTAAAGAAAGCACTAACCATTTTCCTAAACTTGCTCCACAAGTTAATAGCGGCTAATAATTCTTATAAAGTTGCTCCGTGTTAATAACTTCTTTTACTAAGTCAAACTTATTGACTTACCACCTTCAATTATGTGTCTCAATAGAAATACTTGGGGTCTCTCTAGTTGTTCATGTTATGTCCTTCAAGTATCATGGCGTGAATGAACATCAACTCTGTTATACTTGATGCTTTGAAAACTGAGCTGTTTATCTTTTACTGAATACAGTGTTTTTCGATCTTGTGACGAGAATACTAGAGCTCGGTTTTTTTTCTTCTGTGTTCTAGTTAATATTTGAAAATCTGTGCATGTGCTCGTTACGTGGGAATCCCTATTTCTATGGTTATGTTATTTATGCTGAGTGAGCTAGTACTAAACAATTTTCATTTGGAGATCTAATTTCAATTTCTGCTGTCAAAATTTTCTTTATCTTTTGCTACATACTTCATTGGAGGGTAATTACGCATTTTATTGCATCTACAAATGAAGAAGCAATTAACGAAAATTATTTTGTTTAAGAACATCTGCATTCTTTATGACTCGACGAAACTATTTCTGCTCTTGGCATGCCGCGTTTGATTAATGTTTATGGGCATTCTTTATTTGATAGGATAAGTAATGTAGTGTTGCTTTTGAAACTAGATTTGAGGAGAGTGCTGGGGAAGAGCTTGGCAGTGGATCTCCAATCCAAGGATATTATTTGGCAGCGGCATGCTACTGTGGGAAGACCAGAAGACTTCTGAATTCGCTTGAAGGCCAAAATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGTAATTTTGTCTACTTGACGGTTTTGTTTCACTATTATAGATCACTCTTCACGTGGATTTGAATTTTCCAAGTTTTCTATTCATATATGAACTTCAAAAACTGTCTTCCCAGATAATTTTGAACAATTGCAGGGGTTTCAACTCTACGTTCTTGCTTTTCAAAAGGCTGATTTGTAGTTGTAAGAACTATCATACTCATTCTTCCCAAAAGTTGTTGAAATAGTTGTCTTAAAGAGGAGAGAGAAAAATCATATATTTGTAACACTGATACTAAGGTTAAGATACAAGTTTTCAGTCATGTTTTTCCTTCTAGAGTTTGTATGTTTGAATTGTCTTTAAAGGTTTGAAATCGTGAAGCAATTATTGCAGAGTTATTTACTAGTATATGTCTTCATCTTCATTATCAATCCTGCACTTTGAGATCATTTCAAAGTTCATATATTTTTCATGATAATTGATACCAACAAGAACAATTTACTTGGTTGAATAGGCACCAACTAGTGCTGCCCTATCCTCTCATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGGTGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCACACAAGATTCAGATGGAGATCAGATTCAAGGTATATCAAAGTTAAACTTAAAAAGTCTCAGTTCTCATCTTGTAGGAACATTGTCTGGCACCCAAGAGGAAATGAAAGTAAAGGCAAGAGAGAAATCATGTTTATGAAGAGCTTTGGTTTTGGTGTTACTCTAATAATCCTAAGCTGGAAACTTTAATGACTTTACGTGGATTCCTAACTACTAGGACTTAGATTATCATCCTTAAATTATGCTTTCTGGATCAATAACTCTTTGGTCTGATTGTTATAATGCAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGAAATGAAGTGAGAGAATTTACTTCTGGATTTTTACTTTTGTGTGTGTGTATTATTAGGAATATTAGTAATCTTCATCTAATTTGTTTCAAGAGTTCTACATAAGTACGGGATGGTTGGGAATTTTTTTAATATTCTAGTCTAAGTTGTTTGTAGTAAAATCTACTTTTCTGATGGGAGATTCTTGTTTTCATTTATCAGATCTCAAAGCAGTCAGTTTTGATGTTATCATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCAGAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGTGAGAGAGTAGTACGATAATAATGCATAACATTAAAAGGTAGAAGCTCTAGTGACTAATGAAGAAAACATTAAAATTACTCGAGTCTTGATCTTGTATGCTGCATCATGCATGAAAGCTACTGTCTGTTATGCATGATTTTGTATTGGAATATTTTGTGAAAAACTTTCGTCCATTCAGGATCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTAAGATTTAAGCTCAAACTGAAAAGAACAAACCTATATAGTTCATTATACTCTGGCCACTTATTTGCTTTAGCAATTCAATTTACAGGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGACAAAGTTCAAAGATTGAAGGTAGTGTTGCAACATAGATTACAATAAACGAGTTCTTTTGGCAGCTGCCTCTTGTCATGATTTAGGTTTTAAACCTTTCTGCTTCATTATATACGCATATATATATATATATATAAGTGAGGTTCATTCTATTATGGGCCCGTGTACATCCTTTTTAGTTTCTGAGTCGGGTTTTGGAGGGAAGAGGGGAAGTGAAGAAAGAATATTTAATACAAGATTGTAAAAACTATTGTCTTATGCAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTTTCTGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTATGTTTCATTCATATGTTCTATGTTTTTCCATTAAGGGTCAGGTGTACTTCAACATATGTTTGCAAATGTTTATTTATTCCATACTCGTGATTAATGTCGAGTTTCTATATCGTTCTTTCGGACCTCGTTGGCTTATTTCAAAGATATTGGTATGTTTTGCCATTGTTGGTAACTTGCCTATGGTTTCCCAACTCAGGTACAATTTATAGAGCGGCAGTAGTTCCTTCAAGGACATTTTGCGTTGTATGTTATCATTCTCCACTTTTCTGATTCTTGAAATGGAACTTTTTTTTATTACGAACTCCGTACGTGAAAGTCACGTTGAAATGAAAGACCCTTTTTTATTGCTTTTTATTGTTCCAAAATGAATTATTTAAGAAATTTTCCACCTGGTTTTGTTGATGTAGATCTTGTCTTGTTCAGGTTAGCTTTGGTCAGTCGGAGGCGAAGGTCCGTCCTTTTCTCCCATCTATTACCTTGTTCACATTCTCTTGTATATTAATAATAATGTAGTTCGCTGGAACGTTTGCTGTGAGATCCCACATCGGTTGGGGAGAAGAATGAAATATTCTTTATAAGGGTGTGGAAACCTCCCCTGATAGACGCTTTTTAAAAATATTGTGGGAAAGCCCAGAAGAGAGTCCAAAGAGGGCAATATCTGCTAACAGTGGGTTTGGGCCATTACAAATGGTATTAGAGCAAAACACCGGGCGATGTGCTAGCGAGAAGATTGAGCCTCGAAAGGGGGTGGACACGAAGTGGTATGTTAGCAAGTATGCTGGGTCCCGAAGGGGAGTGGATTGGGGAGTCTCACATTGTTTGGGGAAGGGAACGAGTGCCAGCGACGACGTTGGCCCTGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAATGAAACATTAGTTATAAGGGTGTGAAAATCTCCTCCTAGTAGACGCGATTTAAAAACCTTGAGGGAAAACCTGAAAGGAAAAGTCCAAAGAGGACAATATCTGCTAGTAGGCCGTTACATTTACGGTTGATTTCTCATGTACTTACTACATTTTCCTTATTTAGCACCTCTTTGTTTTTAATTTGCTGTATTTTTCATTACATTGTCCTAGAACTGCCATAGAAAATATGACTTGTTTGGACGTATGCCACTTGATCAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAACGTTGATGAGGCTGAAACCATGGTTGAAGGTTGACTTGCTTTGAAATTTACACCATTGTCAATTTCTCTAAATTGTTCTATCCTCATTCAATCTGCTTCATCTATAGGAACATTGGATGGCTTCTTATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTCCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCGGTATGTTTCTTTCTAAGCTTTGATATTCAATTGCTTATGTTATCTGTTGAATGAGTGTATGATTATGATCCGGAAATGGGCAATGTAGGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGGGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCTAAGACTAAAAGTACAAAGAGCAAGAAATGAGGTTTGAATTTTTGTTGTATGCTTATGAACCGAGGTGGTCAAATAGAGAACCCAACCCGACACGAGATTGAATTAATAACTTTTTGTCACTCTCTCTTCTCTGCGCGAGTGCGCGAGATTGAATTAATAATTGTAATGATGAAGTATGCTTTTCCATCGTTC

mRNA sequence

TTCCTCGGTGTTTGTGTTATTTCCTTTTATTTATTTTTAGAATAAAGAAAACCAAAATTTGAGGGAAAAAAAAAAGATCAAGCGGGCGCTGATTGAAATTTTGCCCCGTCCTACCTTTCTGGCGTTCCATTACATTTTCTGCTTCCGAAGGAGGAGGAAGATAGCGAGGAGGAGGGAGACAGCGCGCCGTCGTTTGTTCATTGTTTTTTTCCCATTACTCTGGTGCTGTCGTGCGGCCTCTCAAGATCAAATTTGAGGAGAGTGCTGGGGAAGAGCTTGGCAGTGGATCTCCAATCCAAGGATATTATTTGGCAGCGGCATGCTACTGTGGGAAGACCAGAAGACTTCTGAATTCGCTTGAAGGCCAAAATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGCACCAACTAGTGCTGCCCTATCCTCTCATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGGTGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCACACAAGATTCAGATGGAGATCAGATTCAAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGAAATGAAATCTCAAAGCAGTCAGTTTTGATGTTATCATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCAGAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGATCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGACAAAGTTCAAAGATTGAAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTTTCTGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTACAATTTATAGAGCGGCAGTAGTTCCTTCAAGGACATTTTGCGTTGTTAGCTTTGGTCAGTCGGAGGCGAAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAACGTTGATGAGGCTGAAACCATGGTTGAAGGAACATTGGATGGCTTCTTATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTCCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCGGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGGGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCTAAGACTAAAAGTACAAAGAGCAAGAAATGAGGTTTGAATTTTTGTTGTATGCTTATGAACCGAGGTGGTCAAATAGAGAACCCAACCCGACACGAGATTGAATTAATAACTTTTTGTCACTCTCTCTTCTCTGCGCGAGTGCGCGAGATTGAATTAATAATTGTAATGATGAAGTATGCTTTTCCATCGTTC

Coding sequence (CDS)

ATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGCACCAACTAGTGCTGCCCTATCCTCTCATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGGTGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCACACAAGATTCAGATGGAGATCAGATTCAAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGAAATGAAATCTCAAAGCAGTCAGTTTTGATGTTATCATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCAGAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGATCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGACAAAGTTCAAAGATTGAAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTTTCTGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTACAATTTATAGAGCGGCAGTAGTTCCTTCAAGGACATTTTGCGTTGTTAGCTTTGGTCAGTCGGAGGCGAAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAACGTTGATGAGGCTGAAACCATGGTTGAAGGAACATTGGATGGCTTCTTATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTCCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCGGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGGGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCTAAGACTAAAAGTACAAAGAGCAAGAAATGA

Protein sequence

MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK

Homology

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BLAST of Cp4.1LG01g17320 vs. ExPASy Swiss-Prot
Match: Q9FLU1 (DNA-binding protein BIN4 OS=Arabidopsis thaliana OX=3702 GN=BIN4 PE=1 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 2.6e-41
Identity = 174/465 (37.42%), Postives = 237/465 (50.97%), Query Frame = 0


Query: 2   SSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI- 61
           SSSRE SPDW+RS++AP + +L S S S  +      + I     SSL    D DGD I 
Sbjct: 3   SSSREGSPDWLRSYEAPMTTSLLSLSSSDDDSPYRESEVI-----SSL-PLPDDDGDDIV 62

Query: 62  -----------QGDSDNHNLAKEVKLEE---------------------RTGNEI----- 121
                      + +S+   + K+V +E+                       GN +     
Sbjct: 63  VLETESVELLTRKNSETKVVTKQVSIEQVFSRKKKADASLNLEDSCAGKENGNNVDCEKL 122

Query: 122 ---------SKQSVLMLSSDSE-LSPVNSFI----KEDYGHHEELSELTTSHFQGRGKDE 181
                       SV ++SSDSE  SP+   +    ++D     E +E   +    R K++
Sbjct: 123 SSKHKDAQGGADSVWLVSSDSEPSSPIKQEVTVSTEKDADFVLEATEEEPAVKTVR-KEK 182

Query: 182 NAGGKSKSRKISDK------KLSKKQVKSEVCTSPE----EKIVISDTNKERLTLEGSEC 241
           +   KSKS + + K      ++ K + K    T  E    EK   + +   R T +   C
Sbjct: 183 SPKTKSKSSRKTPKEGNSAQEILKTEDKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENC 242

Query: 242 Y--------VSNGGDVE-IIEKDALDDCNERPV--SSSRLPLVLSDKVQRLKALVECEGN 301
                         D + II ++   D   +P   SSSRLPLVLS+KV R K LVECEG+
Sbjct: 243 AQEILKTEDKDKDTDTDTIIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGD 302

Query: 302 SIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESI 361
           SIDLSGDMGAVGR+VVSD++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+I
Sbjct: 303 SIDLSGDMGAVGRVVVSDTT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAI 362

Query: 362 MNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQN-----EPAEAL 386
           MNDFIQL   SNV EAETMVEGTL+GF F+S+DE  K +K    P DQ+     E     
Sbjct: 363 MNDFIQLIPQSNVYEAETMVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKA 422

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BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: XP_023515821.1 (DNA-binding protein BIN4 [Cucurbita pepo subsp. pepo] >XP_023515829.1 DNA-binding protein BIN4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 712 bits (1837), Expect = 1.01e-257
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS
Sbjct: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120

Query: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECY 180
           HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECY
Sbjct: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECY 180

Query: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG 240
           VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG
Sbjct: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG 240

Query: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300
           RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN
Sbjct: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300

Query: 301 VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTG 360
           VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTG
Sbjct: 301 VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTG 360

Query: 361 GKGQAPKKARKKVQGSKTKSTKSKK 385
           GKGQAPKKARKKVQGSKTKSTKSKK
Sbjct: 361 GKGQAPKKARKKVQGSKTKSTKSKK 385

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BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: XP_022932993.1 (DNA-binding protein BIN4 [Cucurbita moschata])

HSP 1 Score: 698 bits (1801), Expect = 3.08e-252
Identity = 380/385 (98.70%), Postives = 382/385 (99.22%), Query Frame = 0


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPTSAALSS+SESSTNGSLSM DSIDQKGPSSLKTTQDSDGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTTQDSDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS
Sbjct: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120

Query: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECY 180
           HFQGRGKDENAGGKSKSRKISDKKLSKKQVKS+VCTSPEEKIVISDTNKERLTLEGSECY
Sbjct: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECY 180

Query: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG 240
           VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG
Sbjct: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG 240

Query: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300
           RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN
Sbjct: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300

Query: 301 VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTG 360
           VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNE AEALNKKSKNKDEKSSGRKRVKTG
Sbjct: 301 VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNELAEALNKKSKNKDEKSSGRKRVKTG 360

Query: 361 GKGQAPKKARKKVQGSKTKSTKSKK 385
           GK QAPKKARKKVQGSKTKSTKSKK
Sbjct: 361 GKVQAPKKARKKVQGSKTKSTKSKK 385

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BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: XP_022967815.1 (DNA-binding protein BIN4 [Cucurbita maxima])

HSP 1 Score: 692 bits (1786), Expect = 5.95e-250
Identity = 376/385 (97.66%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPTSAALSS+SESSTNGSLSM DSIDQKGPSSLKT+QDSDGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGDSDNHNLAKEVKLEERTGNEISKQSVLML+SDSELSPVNSFIKEDYGHHEELSELTTS
Sbjct: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTS 120

Query: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECY 180
           HFQGRGKDENAGGKSKSRKISDKKLSKKQVKS+VCTSPEEKIVISDTNKERLTLEGSECY
Sbjct: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECY 180

Query: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG 240
           VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLS+KVQRLKALVECEGNSIDLSGDMGAVG
Sbjct: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVG 240

Query: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300
           RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN
Sbjct: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300

Query: 301 VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTG 360
           VDEAETMVEGTLDGF FDSEDEGEKISKV TDQNEPAEALNKKSKNKDEKSSGRKRVKTG
Sbjct: 301 VDEAETMVEGTLDGFSFDSEDEGEKISKVATDQNEPAEALNKKSKNKDEKSSGRKRVKTG 360

Query: 361 GKGQAPKKARKKVQGSKTKSTKSKK 385
           GK QAPKKARKKVQGSKTKSTKSKK
Sbjct: 361 GKVQAPKKARKKVQGSKTKSTKSKK 385

[Close]

BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: KAG6603412.1 (DNA-binding protein BIN4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 680 bits (1755), Expect = 2.08e-245
Identity = 370/374 (98.93%), Postives = 372/374 (99.47%), Query Frame = 0


Query: 12  MRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAK 71
           MRSFQAPTSAALSS+SESSTNGSLSM DSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAK
Sbjct: 1   MRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTTQDSDGDQIQGDSDNHNLAK 60

Query: 72  EVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENA 131
           EVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENA
Sbjct: 61  EVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENA 120

Query: 132 GGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIE 191
           GGKSKSRKISDKKLSKKQVKS+VCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIE
Sbjct: 121 GGKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIE 180

Query: 192 KDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAK 251
           KDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAK
Sbjct: 181 KDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAK 240

Query: 252 NELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGT 311
           NELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGT
Sbjct: 241 NELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGT 300

Query: 312 LDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKGQAPKKARK 371
           LDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGK QAPKKARK
Sbjct: 301 LDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKVQAPKKARK 360

Query: 372 KVQGSKTKSTKSKK 385
           KVQGSKTKSTKSKK
Sbjct: 361 KVQGSKTKSTKSKK 374

[Close]

BLAST of Cp4.1LG01g17320 vs. NCBI nr
Match: KAG7033609.1 (DNA-binding protein BIN4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 543 bits (1398), Expect = 2.74e-192
Identity = 293/296 (98.99%), Postives = 294/296 (99.32%), Query Frame = 0


Query: 90  MLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGKSKSRKISDKKLSKKQ 149
           MLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGKSKSRKISDKKLSKKQ
Sbjct: 1   MLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGKSKSRKISDKKLSKKQ 60

Query: 150 VKSEVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLP 209
           VKS+VCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLP
Sbjct: 61  VKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLP 120

Query: 210 LVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVP 269
           LVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVP
Sbjct: 121 LVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVP 180

Query: 270 SRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV 329
           SRTFCVVSFGQSEAKIESIMNDFIQLKAL NVDEAETMVEGTLDGFLFDSEDEGEKISKV
Sbjct: 181 SRTFCVVSFGQSEAKIESIMNDFIQLKALCNVDEAETMVEGTLDGFLFDSEDEGEKISKV 240

Query: 330 PTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK 385
           PTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGK QAPKKARKKVQGSKTKSTKSKK
Sbjct: 241 PTDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKVQAPKKARKKVQGSKTKSTKSKK 296

[Close]

BLAST of Cp4.1LG01g17320 vs. ExPASy TrEMBL
Match: A0A6J1F3E0 (DNA-binding protein BIN4 OS=Cucurbita moschata OX=3662 GN=LOC111439628 PE=4 SV=1)

HSP 1 Score: 698 bits (1801), Expect = 1.49e-252
Identity = 380/385 (98.70%), Postives = 382/385 (99.22%), Query Frame = 0


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPTSAALSS+SESSTNGSLSM DSIDQKGPSSLKTTQDSDGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTTQDSDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS
Sbjct: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120

Query: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECY 180
           HFQGRGKDENAGGKSKSRKISDKKLSKKQVKS+VCTSPEEKIVISDTNKERLTLEGSECY
Sbjct: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECY 180

Query: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG 240
           VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG
Sbjct: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG 240

Query: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300
           RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN
Sbjct: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300

Query: 301 VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTG 360
           VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNE AEALNKKSKNKDEKSSGRKRVKTG
Sbjct: 301 VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNELAEALNKKSKNKDEKSSGRKRVKTG 360

Query: 361 GKGQAPKKARKKVQGSKTKSTKSKK 385
           GK QAPKKARKKVQGSKTKSTKSKK
Sbjct: 361 GKVQAPKKARKKVQGSKTKSTKSKK 385

[Close]

BLAST of Cp4.1LG01g17320 vs. ExPASy TrEMBL
Match: A0A6J1HVH1 (DNA-binding protein BIN4 OS=Cucurbita maxima OX=3661 GN=LOC111467219 PE=4 SV=1)

HSP 1 Score: 692 bits (1786), Expect = 2.88e-250
Identity = 376/385 (97.66%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPTSAALSS+SESSTNGSLSM DSIDQKGPSSLKT+QDSDGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGDSDNHNLAKEVKLEERTGNEISKQSVLML+SDSELSPVNSFIKEDYGHHEELSELTTS
Sbjct: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTS 120

Query: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLEGSECY 180
           HFQGRGKDENAGGKSKSRKISDKKLSKKQVKS+VCTSPEEKIVISDTNKERLTLEGSECY
Sbjct: 121 HFQGRGKDENAGGKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECY 180

Query: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVG 240
           VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLS+KVQRLKALVECEGNSIDLSGDMGAVG
Sbjct: 181 VSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVG 240

Query: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300
           RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN
Sbjct: 241 RIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSN 300

Query: 301 VDEAETMVEGTLDGFLFDSEDEGEKISKVPTDQNEPAEALNKKSKNKDEKSSGRKRVKTG 360
           VDEAETMVEGTLDGF FDSEDEGEKISKV TDQNEPAEALNKKSKNKDEKSSGRKRVKTG
Sbjct: 301 VDEAETMVEGTLDGFSFDSEDEGEKISKVATDQNEPAEALNKKSKNKDEKSSGRKRVKTG 360

Query: 361 GKGQAPKKARKKVQGSKTKSTKSKK 385
           GK QAPKKARKKVQGSKTKSTKSKK
Sbjct: 361 GKVQAPKKARKKVQGSKTKSTKSKK 385

[Close]

BLAST of Cp4.1LG01g17320 vs. ExPASy TrEMBL
Match: A0A1S3CDA8 (DNA-binding protein BIN4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4 SV=1)

HSP 1 Score: 528 bits (1360), Expect = 2.65e-185
Identity = 303/393 (77.10%), Postives = 329/393 (83.72%), Query Frame = 0


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPT  ALSS+S SS NGS SM ++IDQ+ PSS KTTQD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  NHNLAKE KL+ RTG+E S+ SV MLSSDSE    N+FIKED  HHEELSEL TS
Sbjct: 61  QGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCSDNNFIKEDCNHHEELSELATS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLE 180
             QGR KDENAG     GKSKSRK+S +   KK++KS+VCTS +EKI+ SDTNK  LTLE
Sbjct: 121 EIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQVCTSAKEKIINSDTNKGGLTLE 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGD 240
           GSE +V NG + EI+EKDALDDC   PVSSSRLPLVLSDKV RLKALVECEG SIDLSGD
Sbjct: 181 GSEGFVRNGEE-EILEKDALDDCIVPPVSSSRLPLVLSDKVHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQL 300
           MGAVGR+VVSDSS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQL
Sbjct: 241 MGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQL 300

Query: 301 KALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQNEPAEALNKKSKNKDEKSS 360
           KALS VDEAETMVEGTLDGF FDSEDE EKI+KV   P DQNEP E LN KSKNK EKSS
Sbjct: 301 KALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSS 360

Query: 361 GRKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK 385
           GRKRVK+GG+ QAPKK RKKVQGSKTK+ KSKK
Sbjct: 361 GRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 392

[Close]

BLAST of Cp4.1LG01g17320 vs. ExPASy TrEMBL
Match: A0A6J1CI66 (DNA-binding protein BIN4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011402 PE=4 SV=1)

HSP 1 Score: 521 bits (1342), Expect = 1.50e-182
Identity = 301/393 (76.59%), Postives = 322/393 (81.93%), Query Frame = 0


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQ PT  ALSS+SESS N S  M ++IDQK  SS KTTQD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQVPTGVALSSNSESSNNVSSFMDNAIDQKDLSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  +HNL KE+KLEE  G+  SK SV MLSSDSEL   NS IKEDY HHEEL E  TS
Sbjct: 61  QGDRGHHNLVKEMKLEEHAGHGDSKHSVWMLSSDSELCSDNSLIKEDYSHHEELFESKTS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLE 180
            F GR KDEN       GKSKSRK+SDKK  KK+VKS+V T  +EKI+   TNKE   LE
Sbjct: 121 QFLGRRKDENTDREFTDGKSKSRKVSDKKSPKKEVKSQVRTLTKEKIINFHTNKEGFVLE 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGD 240
           GSEC V NGGDVEII KDALDDCN  PVSSSRLPLVLSDKV RLKALVECEG SIDLSGD
Sbjct: 181 GSECCVRNGGDVEIIGKDALDDCNGPPVSSSRLPLVLSDKVHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQL 300
           +GAVGR+VVSDSSFAKNELCLDLKGTIYRAA+VPSRTFC+VSFGQSEAK+E IMNDFIQL
Sbjct: 241 VGAVGRVVVSDSSFAKNELCLDLKGTIYRAAIVPSRTFCIVSFGQSEAKMECIMNDFIQL 300

Query: 301 KALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQNEPAEALNKKSKNKDEKSS 360
           KA SN+DEAETMVEGTLDGF FDSEDE EKI+KV   PTDQNE  E L+KKSKNK EKSS
Sbjct: 301 KAESNIDEAETMVEGTLDGFSFDSEDEAEKITKVSSSPTDQNEAVEGLSKKSKNKAEKSS 360

Query: 361 GRKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK 385
           GRKRV+TGGK QAPKKARKKVQG KTK+ KSKK
Sbjct: 361 GRKRVRTGGKLQAPKKARKKVQGFKTKNGKSKK 393

[Close]

BLAST of Cp4.1LG01g17320 vs. ExPASy TrEMBL
Match: A0A1S3CDB0 (DNA-binding protein BIN4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 4.06e-181
Identity = 303/408 (74.26%), Postives = 329/408 (80.64%), Query Frame = 0


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI 60
           MSSSREQSPDWMRSFQAPT  ALSS+S SS NGS SM ++IDQ+ PSS KTTQD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  NHNLAKE KL+ RTG+E S+ SV MLSSDSE    N+FIKED  HHEELSEL TS
Sbjct: 61  QGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCSDNNFIKEDCNHHEELSELATS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTLE 180
             QGR KDENAG     GKSKSRK+S +   KK++KS+VCTS +EKI+ SDTNK  LTLE
Sbjct: 121 EIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQVCTSAKEKIINSDTNKGGLTLE 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSDKVQRLKALVECEGNSIDLSGD 240
           GSE +V NG + EI+EKDALDDC   PVSSSRLPLVLSDKV RLKALVECEG SIDLSGD
Sbjct: 181 GSEGFVRNGEE-EILEKDALDDCIVPPVSSSRLPLVLSDKVHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLKG---------------TIYRAAVVPSRTFCVVSFGQ 300
           MGAVGR+VVSDSS AKNELCLDLKG               T+YRA +VPSRTFC+VSFGQ
Sbjct: 241 MGAVGRVVVSDSSSAKNELCLDLKGKFHPNMLCFGSKRSGTLYRAVIVPSRTFCIVSFGQ 300

Query: 301 SEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQNEPA 360
           SEAKIESIMNDFIQLKALS VDEAETMVEGTLDGF FDSEDE EKI+KV   P DQNEP 
Sbjct: 301 SEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQNEPV 360

Query: 361 EALNKKSKNKDEKSSGRKRVKTGGKGQAPKKARKKVQGSKTKSTKSKK 385
           E LN KSKNK EKSSGRKRVK+GG+ QAPKK RKKVQGSKTK+ KSKK
Sbjct: 361 EGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 407

[Close]

BLAST of Cp4.1LG01g17320 vs. TAIR 10
Match: AT5G24630.2 (double-stranded DNA binding )

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-44
Identity = 169/449 (37.64%), Postives = 237/449 (52.78%), Query Frame = 0


Query: 2   SSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI- 61
           SSSRE SPDW+RS++AP + +L S S S  +      + I     SSL    D DGD I 
Sbjct: 3   SSSREGSPDWLRSYEAPMTTSLLSLSSSDDDSPYRESEVI-----SSL-PLPDDDGDDIV 62

Query: 62  -----------QGDSDNHNLAKEVKLEE-----------------RTGNEI--------- 121
                      + +S+   + K+V +E+                   GN +         
Sbjct: 63  VLETESVELLTRKNSETKVVTKQVSIEQVFSRKKKADASLNLEGKENGNNVDCEKLSSKH 122

Query: 122 -----SKQSVLMLSSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGKSKSR 181
                   SV ++SSDSE S   S IK++      +S    + F     +E    K+  +
Sbjct: 123 KDAQGGADSVWLVSSDSEPS---SPIKQEV----TVSTEKDADFVLEATEEEPAVKTVRK 182

Query: 182 KISDKKLSKKQVKSEVCTSPEEKIVISDTNKERLTL------EGSECYVSNGG-----DV 241
           + S K  SK   K+    +  ++I+ ++      T+      +G++ ++ +       D 
Sbjct: 183 EKSPKTKSKSSRKTPKEGNSAQEILKTEDKDTDTTIAEQDFSKGTQRFLYHADKDKDTDT 242

Query: 242 E-IIEKDALDDCNERPV--SSSRLPLVLSDKVQRLKALVECEGNSIDLSGDMGAVGRIVV 301
           + II ++   D   +P   SSSRLPLVLS+KV R K LVECEG+SIDLSGDMGAVGR+VV
Sbjct: 243 DTIIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVV 302

Query: 302 SDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEA 361
           SD++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMNDFIQL   SNV EA
Sbjct: 303 SDTT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMNDFIQLIPQSNVYEA 362

Query: 362 ETMVEGTLDGFLFDSEDEGEKISKV---PTDQN-----EPAEALNKKSKNKDEKSSGRKR 386
           ETMVEGTL+GF F+S+DE  K +K    P DQ+     E       K+K K E   G+KR
Sbjct: 363 ETMVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPKAKAKGETVIGKKR 422

[Close]

BLAST of Cp4.1LG01g17320 vs. TAIR 10
Match: AT5G24630.5 (double-stranded DNA binding )

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-43
Identity = 174/457 (38.07%), Postives = 238/457 (52.08%), Query Frame = 0


Query: 2   SSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI- 61
           SSSRE SPDW+RS++AP + +L S S S  +      + I     SSL    D DGD I 
Sbjct: 3   SSSREGSPDWLRSYEAPMTTSLLSLSSSDDDSPYRESEVI-----SSL-PLPDDDGDDIV 62

Query: 62  -----------QGDSDNHNLAKEVKLEE-----------------RTGNEI--------- 121
                      + +S+   + K+V +E+                   GN +         
Sbjct: 63  VLETESVELLTRKNSETKVVTKQVSIEQVFSRKKKADASLNLEGKENGNNVDCEKLSSKH 122

Query: 122 -----SKQSVLMLSSDSE-LSPVNSFI----KEDYGHHEELSELTTSHFQGRGKDENAGG 181
                   SV ++SSDSE  SP+   +    ++D     E +E   +    R K+++   
Sbjct: 123 KDAQGGADSVWLVSSDSEPSSPIKQEVTVSTEKDADFVLEATEEEPAVKTVR-KEKSPKT 182

Query: 182 KSKSRKISDK------KLSKKQVKSEVCTSPE----EKIVISDTNKERLTLEGSEC---- 241
           KSKS + + K      ++ K + K    T  E    EK   + +   R T +   C    
Sbjct: 183 KSKSSRKTPKEGNSAQEILKTEDKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENCAQEI 242

Query: 242 YVSNGGDVE-IIEKDALDDCNERPV--SSSRLPLVLSDKVQRLKALVECEGNSIDLSGDM 301
             +   D + II ++   D   +P   SSSRLPLVLS+KV R K LVECEG+SIDLSGDM
Sbjct: 243 LKTEDTDTDTIIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDM 302

Query: 302 GAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLK 361
           GAVGR+VVSD++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMNDFIQL 
Sbjct: 303 GAVGRVVVSDTT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMNDFIQLI 362

Query: 362 ALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQN-----EPAEALNKKSKNKD 386
             SNV EAETMVEGTL+GF F+S+DE  K +K    P DQ+     E       K+K K 
Sbjct: 363 PQSNVYEAETMVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPKAKAKG 422

[Close]

BLAST of Cp4.1LG01g17320 vs. TAIR 10
Match: AT5G24630.3 (double-stranded DNA binding )

HSP 1 Score: 172.6 bits (436), Expect = 6.3e-43
Identity = 174/461 (37.74%), Postives = 237/461 (51.41%), Query Frame = 0


Query: 2   SSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI- 61
           SSSRE SPDW+RS++AP + +L S S S  +      + I     SSL    D DGD I 
Sbjct: 3   SSSREGSPDWLRSYEAPMTTSLLSLSSSDDDSPYRESEVI-----SSL-PLPDDDGDDIV 62

Query: 62  -----------QGDSDNHNLAKEVKLEE-----------------RTGNEI--------- 121
                      + +S+   + K+V +E+                   GN +         
Sbjct: 63  VLETESVELLTRKNSETKVVTKQVSIEQVFSRKKKADASLNLEGKENGNNVDCEKLSSKH 122

Query: 122 -----SKQSVLMLSSDSE-LSPVNSFI----KEDYGHHEELSELTTSHFQGRGKDENAGG 181
                   SV ++SSDSE  SP+   +    ++D     E +E   +    R K+++   
Sbjct: 123 KDAQGGADSVWLVSSDSEPSSPIKQEVTVSTEKDADFVLEATEEEPAVKTVR-KEKSPKT 182

Query: 182 KSKSRKISDK------KLSKKQVKSEVCTSPE----EKIVISDTNKERLTLEGSECY--- 241
           KSKS + + K      ++ K + K    T  E    EK   + +   R T +   C    
Sbjct: 183 KSKSSRKTPKEGNSAQEILKTEDKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENCAQEI 242

Query: 242 -----VSNGGDVE-IIEKDALDDCNERPV--SSSRLPLVLSDKVQRLKALVECEGNSIDL 301
                     D + II ++   D   +P   SSSRLPLVLS+KV R K LVECEG+SIDL
Sbjct: 243 LKTEDKDKDTDTDTIIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDL 302

Query: 302 SGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDF 361
           SGDMGAVGR+VVSD++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMNDF
Sbjct: 303 SGDMGAVGRVVVSDTT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMNDF 362

Query: 362 IQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQN-----EPAEALNKKS 386
           IQL   SNV EAETMVEGTL+GF F+S+DE  K +K    P DQ+     E       K+
Sbjct: 363 IQLIPQSNVYEAETMVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPKA 422

[Close]

BLAST of Cp4.1LG01g17320 vs. TAIR 10
Match: AT5G24630.4 (double-stranded DNA binding )

HSP 1 Score: 172.6 bits (436), Expect = 6.3e-43
Identity = 174/461 (37.74%), Postives = 237/461 (51.41%), Query Frame = 0


Query: 2   SSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI- 61
           SSSRE SPDW+RS++AP + +L S S S  +      + I     SSL    D DGD I 
Sbjct: 3   SSSREGSPDWLRSYEAPMTTSLLSLSSSDDDSPYRESEVI-----SSL-PLPDDDGDDIV 62

Query: 62  -----------QGDSDNHNLAKEVKLEE-----------------RTGNEI--------- 121
                      + +S+   + K+V +E+                   GN +         
Sbjct: 63  VLETESVELLTRKNSETKVVTKQVSIEQVFSRKKKADASLNLEGKENGNNVDCEKLSSKH 122

Query: 122 -----SKQSVLMLSSDSE-LSPVNSFI----KEDYGHHEELSELTTSHFQGRGKDENAGG 181
                   SV ++SSDSE  SP+   +    ++D     E +E   +    R K+++   
Sbjct: 123 KDAQGGADSVWLVSSDSEPSSPIKQEVTVSTEKDADFVLEATEEEPAVKTVR-KEKSPKT 182

Query: 182 KSKSRKISDK------KLSKKQVKSEVCTSPE----EKIVISDTNKERLTLEGSECY--- 241
           KSKS + + K      ++ K + K    T  E    EK   + +   R T +   C    
Sbjct: 183 KSKSSRKTPKEGNSAQEILKTEDKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENCAQEI 242

Query: 242 -----VSNGGDVE-IIEKDALDDCNERPV--SSSRLPLVLSDKVQRLKALVECEGNSIDL 301
                     D + II ++   D   +P   SSSRLPLVLS+KV R K LVECEG+SIDL
Sbjct: 243 LKTEDKDKDTDTDTIIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDL 302

Query: 302 SGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDF 361
           SGDMGAVGR+VVSD++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMNDF
Sbjct: 303 SGDMGAVGRVVVSDTT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMNDF 362

Query: 362 IQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQN-----EPAEALNKKS 386
           IQL   SNV EAETMVEGTL+GF F+S+DE  K +K    P DQ+     E       K+
Sbjct: 363 IQLIPQSNVYEAETMVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPKA 422

[Close]

BLAST of Cp4.1LG01g17320 vs. TAIR 10
Match: AT5G24630.1 (double-stranded DNA binding )

HSP 1 Score: 172.2 bits (435), Expect = 8.3e-43
Identity = 174/462 (37.66%), Postives = 237/462 (51.30%), Query Frame = 0


Query: 2   SSSREQSPDWMRSFQAPTSAALSSHSESSTNGSLSMGDSIDQKGPSSLKTTQDSDGDQI- 61
           SSSRE SPDW+RS++AP + +L S S S  +      + I     SSL    D DGD I 
Sbjct: 3   SSSREGSPDWLRSYEAPMTTSLLSLSSSDDDSPYRESEVI-----SSL-PLPDDDGDDIV 62

Query: 62  -----------QGDSDNHNLAKEVKLEE-----------------RTGNEI--------- 121
                      + +S+   + K+V +E+                   GN +         
Sbjct: 63  VLETESVELLTRKNSETKVVTKQVSIEQVFSRKKKADASLNLEGKENGNNVDCEKLSSKH 122

Query: 122 ------SKQSVLMLSSDSE-LSPVNSFI----KEDYGHHEELSELTTSHFQGRGKDENAG 181
                    SV ++SSDSE  SP+   +    ++D     E +E   +    R K+++  
Sbjct: 123 KDAQQGGADSVWLVSSDSEPSSPIKQEVTVSTEKDADFVLEATEEEPAVKTVR-KEKSPK 182

Query: 182 GKSKSRKISDK------KLSKKQVKSEVCTSPE----EKIVISDTNKERLTLEGSECY-- 241
            KSKS + + K      ++ K + K    T  E    EK   + +   R T +   C   
Sbjct: 183 TKSKSSRKTPKEGNSAQEILKTEDKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENCAQE 242

Query: 242 ------VSNGGDVE-IIEKDALDDCNERPV--SSSRLPLVLSDKVQRLKALVECEGNSID 301
                      D + II ++   D   +P   SSSRLPLVLS+KV R K LVECEG+SID
Sbjct: 243 ILKTEDKDKDTDTDTIIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSID 302

Query: 302 LSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMND 361
           LSGDMGAVGR+VVSD++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMND
Sbjct: 303 LSGDMGAVGRVVVSDTT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMND 362

Query: 362 FIQLKALSNVDEAETMVEGTLDGFLFDSEDEGEKISKV---PTDQN-----EPAEALNKK 386
           FIQL   SNV EAETMVEGTL+GF F+S+DE  K +K    P DQ+     E       K
Sbjct: 363 FIQLIPQSNVYEAETMVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPK 422

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLU1	2.6e-41	37.42	DNA-binding protein BIN4 OS=Arabidopsis thaliana OX=3702 GN=BIN4 PE=1 SV=2	[more]

BLAST of Cp4.1LG01g17320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515821.1	1.01e-257	100.00	DNA-binding protein BIN4 [Cucurbita pepo subsp. pepo] >XP_023515829.1 DNA-bindin...	[more]
XP_022932993.1	3.08e-252	98.70	DNA-binding protein BIN4 [Cucurbita moschata]	[more]
XP_022967815.1	5.95e-250	97.66	DNA-binding protein BIN4 [Cucurbita maxima]	[more]
KAG6603412.1	2.08e-245	98.93	DNA-binding protein BIN4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7033609.1	2.74e-192	98.99	DNA-binding protein BIN4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG01g17320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3E0	1.49e-252	98.70	DNA-binding protein BIN4 OS=Cucurbita moschata OX=3662 GN=LOC111439628 PE=4 SV=1	[more]
A0A6J1HVH1	2.88e-250	97.66	DNA-binding protein BIN4 OS=Cucurbita maxima OX=3661 GN=LOC111467219 PE=4 SV=1	[more]
A0A1S3CDA8	2.65e-185	77.10	DNA-binding protein BIN4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4...	[more]
A0A6J1CI66	1.50e-182	76.59	DNA-binding protein BIN4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110114...	[more]
A0A1S3CDB0	4.06e-181	74.26	DNA-binding protein BIN4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4...	[more]

BLAST of Cp4.1LG01g17320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24630.2	2.0e-44	37.64	double-stranded DNA binding	[more]
AT5G24630.5	1.3e-43	38.07	double-stranded DNA binding	[more]
AT5G24630.3	6.3e-43	37.74	double-stranded DNA binding	[more]
AT5G24630.4	6.3e-43	37.74	double-stranded DNA binding	[more]
AT5G24630.1	8.3e-43	37.66	double-stranded DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..356
IPR033246	DNA-binding protein BIN4	PANTHER	PTHR34810	DNA-BINDING PROTEIN BIN4	coord: 1..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17320.1	Cp4.1LG01g17320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042023	DNA endoreduplication
cellular_component	GO:0009330	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
molecular_function	GO:0003690	double-stranded DNA binding