Cp4.1LG01g17210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g17210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	survival of motor neuron-related-splicing factor 30
Location	Cp4.1LG01: 11492913 .. 11500266 (-)
RNA-Seq Expression	Cp4.1LG01g17210
Synteny	Cp4.1LG01g17210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGCCGACCCGGATTTGAAAGCCCGAACACTGAACCTTGAAAGGGCTTCTTCGTTCTAAATCGCGGCGGAGGCGGTGTTGTGTGTGCCTTATTCTTCGTCCAGATTTTCCCAATTTCACGCTCTTTTTCTTCCTTCTCCTCCTCTCTTCATCCCTGCAACATATTCTCTCACACCATTCTCTAGTTTCAACTTCTCAATTCATCTTCTACCAAAATGCAAGGAGGAGAAGATGTAAGCATGGAAGAGTTGGCTACTAATCTCTCTACCTACAAAGACCAGCTTCAGCAGGTCACCCTCTTGCCCAATCCTTTCTGCCTATGAATTGCTTTTTCTTTTTCTTTTTTTTTTTTTCGTTAAATTTTCTTCATTTTGTTTCACTAACTGGGGTTCTCTTTCTTTAAATTTATTCCAAGCAAATTTGGATATCTATGATCATTTGAACCTTTGCCGTCGTCATTCTTCAGTTCTTTCTAGTACTTTGTATCTGAATTAGGGTTTTTCTCAACTCCTTCGAGTGTTGCGGTGCTAAGTTGCAGCGAATACCGAGGAAATGAAACCTGTGTTGGATAATTGCATTAAACCTAGGAAGTTAGAACTTAATTCAGATATAGTATCAACATTTCTTTTTACGACTTTTCAGTTTAATGAGGTATTATCTGTCCTGGTTCTTTGGATTTTATTATTATTATTACTATAATTTTTTTTTTTATTATTTTTTTTTTATGTATTCAGAATTCTGAAATTTTTTTATCAGGGTTTAAGCAACTGAAGAATTTTACATTTGCATGATGAATCTTTAATTATCAATCAGTCACTTCCTTCCCATAACTAAATGAGTTCTTGGCTTCCTCACTTCGTTACATTTTTTGTGTACGTTTTTCAGTAAAATAACTATTTCTATTCTGATCCAGGTCAGGGAGCTGTTAGATGATGATCCTGGCAACTCTGAGTACATAGATATGGAAAAGGAGCTTGAAGAGGTAGTTTATTTTTGTCCACCTAGTACGCCCATCCTTCCTTGTGAACTCGTCACATGTTTATGGTTTAGCACTCTTCATATTCCCATTGAATGTATTTTAGGGTCATCTTCTGCGGTAGACTAAGTATCCGAGAACGCTCAGAACTATTTTTTTTATTATGTGGATTTCCAGTCAAGTTTGCTTTGTTTCTTTTGTCTGTCTTCTTTCTTCCTTTTAAAGGAAACATGTTGTGGAAATACAAAAGAGTTATGGTCCCTGTGGAGATTGTCATTCTCGTATTTGGGAGGAAAAGGTGAGGGCCGTGTATCTTTCATTTATGTGCTCCAGAGCTCTAATCTCTGGTCATAAATGATGATTATTGGATATGTGTGAAAATTTTGAACTTCCTCAAGATGCACATCACTTCTACCTTGGTTCCCTTGCAGGTGTGCTAATATTCGTTGGCAAGTCTGCTCTCCACTGACCTCCTTTCAGATGCTGATCCTGAGATTTAAGTTCTTGTGTTTTTTTCTTTTTCTTTTTCTTTCCCTTCTTGGGACAAATACCTGCTCTTTATGAAATTTAAGTTGAAGAGTATATTTTAACAGCAACATGGACTTGGACTAAAGTTGCAGTAATGCAGGTTATCGCCTTGACGGAAGAGCTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACTGGTGATGACAGTGCATCAATTAGTTTCCAGCAGACTAAAGGAAATAAGATGGTAAGTTCACATTTGTTCTTGTTTTGAGCATTACATCTCTGCTGGAAGCAACATTATATAATAAATGGTTATGGCTTTAGATTTAATGTGCACTGCTTGGATCTCTGTATTGTTTATTGTATATGTTGGTATTGTTTCTTTGCCTTATTTGGAAGCATCCCTCCTAAATGGTTACTGACATGTAGTTTTATTGTTATGTGCTTTAATGATTCTTTGTGGTGCATATTTTTGGCCTAGGATTCTCTGTGTGCTTCTGCTTGGAAGCGATTTATTTATGGTTTCAACCATTGTTAACAATTAGAGGTTCTTTCGCATTTGAACTTGTTTGTGGGATTTATAAAGGAAACTTGTTTGTTTCTCTTAATTTATAGGTTATGTGATTTTTGGAGAAATTAATTATTAGGTTTTAAATAACCCAAGGATAGACAAATATGATGCAATACAAATAGAAAGCATTGAAACTGATTAGGAAAGGAAAATATTAACTATTAATAATAAAAAAAAAAAGACTAATATCTAATTTGAAAAATAGTAGCCTATATAAATGATACAAATCTATACTTCTCCTCAAGTTGGGTGGAATACTGAATACAAGCCAAGCCTGAAAATAAATTCATCAAAATAAGTAAACTTGTCCATGGTAATGATTTGGTTGCGGTGTCAACAATTTGATGGTAAGATGGAGCACATTTTAGTTTTGCTATACTATTATTTACCTTTTTAGACTTGAAGTAGTGATCTATCTATAGGTATTGACCTTCTAAGGGGTTCTCTTGTTCACACTTTCATTTGCTTTGTTTCCCTTCTATTCAAGGAGCCTCCGTCTTTTTCCTTTCTTTGGAAGATTAAAATTCCTGAGAAAGTGATTTTTTTGCTTGTAAAATCTAGCATTAGAGAGAGCTAGACCATCCATGATTATACCCGACATTCCTCCTTTGTGTTTGCGGCCACAATAGTTTGTTATTTGCAAATGTCGTATGGAGAATCCAGATCATCTCTTGTGGGGTTGTCATGATTTTGAAACCAAAAATTTTCTAGAATTGGGGTAGGTGCTCACTCTCCTTGGATTTGATGATATAGTTAGTTTGGGATTGTTGCTCTTTGATTAGGAGATTCTAATGAACTCCCCCTTTCATGATTAGGGAACAGTTTTATGGTGGACATGTTTCACAATTTTGTGGGAGATTGGCTTAGGAGGAGAAACAGCAGGATCTCTAAAAGGGTTGAGAGGTATCAAGGGGAGAGGTGGGAGGTTGTGAGGTTTAATACCTCTTTATGGGCTTCCATGAATTTGTTATTTTTTTGTTATTATCAATTAGGTCTTACTCTTTCAGATTATAATCTGTTCTTGTAGGTTGTGGTGGATTCCTTTTGAGGCTTGGTATTTTTGTATGTCCTTGTACATTCTTTCATTTTTCTCAATGAAAGCACGATCTCTTATTAAGGAGATCTCGTTGTCACTCAATATTTCGATTTCCTAACCCACCATTGGCAATAATTAGATATGTATGAGACTTATGCATGAAAATGTGTTGAAATCTTATCTTTTTATCAGAAGATAATTGAACAAAAGAGACCTTGAAGTTTTCTCCTCGTCTTAACAAGGAGTCAAATGATGTTAGAGGAATAATAATGGGTGCAGAACCCCTTCATTCTATCCAGGAAATTGTTGCTGCCACGCAAAGTGAGGAGTGCAGAAAATGACTGATTTCTGGCAAGCAACAGTTTTGTTGCTGCCATACATTTAATTCGCACTTTACAATCCCCAAATTCATGTCAAATATTACTAATAATTTTTTTCTACTTCCTTTTCTTCTAGCAAGCAACTTCATCTATTGATCTCCCTTTTCTCTACCATGTTTTCCCCTCCCTCATCATCATCTTCTTCTCTTTTCTTCCCAAGGGAGAGTAGGAATCTCTTCTTCTTGGCCACCATTTTTTTACCTCCAAAAACACCATCTTCATCTTTTTCTTATCTTCTTCCTCGTCATGTTGCATGAAGAAAACACCTCATTTGGTTCCACCATTTTTCACTTTTGGCTTTCACCATTTTCACTCCACCATACTCACCTTCAAATAGCCTCCACTTGACAATCTCTTTCCCTCAAGCAGCAACCAAAATTAAGTTGTTCTATTCTTCTCGGTTTGCCACACATAAGCTATGGAAGGAAGTCAACACTCTTATTTTTAAGACATACTGCAAAAAACAATTTGAATGGTTTGATATGGAAGCAGTACCACTCAAGAGACGTCATAAATTGCTAGGCAGTTGAATCAACCTTCCTTTGAATTGTATTTCAATATTGTATTCCATCCATGTACATAATATTTACATGGAAGTATGCGTTGAGATGTTTGGTGTTCTAATATTCTATATGTTTTTTGTATGCAGGAAGCTGAAAGCATGTCTGACTATCACGAAAAATTTCCTATTGGAACAAAAGTTCAAGCTGTTTGGAGCGAGGATGGGGAGTGGTGAGTAAAAAAAGAAAAAAGGAGAAAACTTTACAGACTTAAACAAATTCTGTTTCTCTAGGTAGTACACTGTGTCATTGAATTCCAAAACAGAAGAAAGTTTATTTGCCAACTTATTCCCTTTTGAGTTGGAAAAGAGACATTGTTGAAGAAAAGGGATATGTGCTTGAAAGGTTACAAATTACTTGAACACGTACTAGAGAATATTGAAAGTACTCTTTATTCACTGTTTCAAATTGACTGCCCCAGGAAATGCCAAAATAGTAAGGGTCGGTCTTCATTTGTGGGCATGGAGGATAATTTTTTCTTGAAAATTTAGACTCTATCCAATTTAATGAACTTCTACATTTCCATAAGTTTTTTTTTTTTTTTTTTTTTTTTTACAAAATGGTTGTTAATGAAAACCAGGCTCTTGTGCTATTTTTCATCATGTCATTCGGTGAAGAGGGTTGGTCCCTAGTCAGGTTTAAAGCGTCTCTTTGGGCTTCAATTGCTAAAGAGTTTCATAATCCTTCACTAGGTCATATTTTTTTTTTTATTTAAGAGCCCTTTTCTGTATAGCTTGTTGTTGAGGCTATCATTTTCAGGCTATCATTTTGTCCACCCGTTTTCTTTCATGTTTCTCAGTGTAGGTATTTTTTCTTGTTAAAAAAAATTCTGTTCAGCTATTTTGATTTGAGCCTTTGAAGTAACATTTCACTTGGTCTCTGGTCAAAAGGAGTGATAAGTCTATGAGAATAATTAGTCCGTTGAAGCTGATTTTACTTTCTAGATCTCTAGGCATATTCTAATTTTGTTGCTGGACGCATCTAAACTTCTCACAACCTCATTGTTCTTTGCCTCCTTTTCCGTTGACTGTTGTTTTTAATAGAAACAAAAAAATTTCCATTGACTGTGTTCAATTGTATAAATATTCAGGTACGATGCTACAATTGAAGCCCATACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTAAGGTTTCTACTGCTGCAGTTTGCATGACTTTTGATTATTTCTAAAGAGTATTATAGTACTTCTTCAGAAAGATCTGGGTCTGATTTTCTCTAAATTAACTAGAACTGTGAAGAATTGGATCATGGTGAGTAAATACGGGAAATTTCCCTTTGGGTGGGTCTAATTTGTGGGACTAAAAACATTTGTAAGAATTCTTGGAAGGCCATCTTCGTTTTAGTTCCTTTGTTTGTTGGATTAGTTGGTATAAATGCCAAGGTTTCCTCTTTGTAAGACTTGATTGAACATATAAAATTCTAGCATTTTGGTTTACACCAGGCTGTCCAGAAAACTGGAAGGTATCTTGAACTCATTCTCTCTAAAGCCCATTTGTTATGTATATATTGGCTTTGATTACCACCAAGCCCTTAAAGAATTGTTTCCTTTTAAATGTAAAAATGCACGTTATTGAGAGATAATGGGAAGAGACTACTGCTAGTACAAGGAGAGTAAGCATGAGGGAGAACTCGAAGTTTAGGAGTTCGAATCATAGAACCTGTTAAATGGAATTGTTCACCTTTTACCTAAGTAGACAGTAAAAACATCTGCACCCATTGTCAACACTAACGATATCTACTAATTGTAGGTGGACCCTGCTAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAACAGGCTATCAAGCGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCACGAAATTTACCATCAAGGCTTCGAATTGAACCTGATGATCCTGAGGATGTAGTAAGTGGTTGATAATCTTAATATTTCATGACAACTAATTTATTAATCTAGTAATTAAGACAAATTTAGTAGTGCATTTGTTTGTACCTGTGGTGCTTGAAGTTCATTTTTATTTTTATTATCAGAGTACAACCCCCCGCCCAAAACTTGCTCTGATGTAGTAATTTTTCTTGTATAGAAAGCCACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAGAATAAACGGCAGAATGCTTGGCAGCAGTTTCAGTCAGCAAAAGGCAAGTCTAAGAAGGTAAGTTTTGTGAATTTTAGAATTTTGTGGAACATTCATGCGTTTTAGACCGAGGCCCAACAGGTATGAGGTAAAACCCCAAGGCCAAAGGAATAAGTATTTCAATTAGCATTAATCAAAACAGAATCATAATTGTAAGAAGGTTTCAAGAGGGGATGCCAGGTTGTATTTGTATCTGAGTATCTTCCCAACCCTTAAAATAACTTCCCTTGTTATCACATTTTCCCCTTTTAGCACCTTTGTGGCTGTCCAATGATAATTTATACATGCACATTCTCAGATTGGCTTCTTCTCTGGGCGCAAGAAGGAGAGCATTTTCAAGTCTCCTGATGATCCAAATGGCAAGGTTGGTGTGACTGGAAGTGGCAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCATCAGTGGAGATGGATGATTAAGGGCAGGTCAGATTTTGTAGGTTGCTGCTTTCTTTGTATGTATCTTCATTTAGTATCCATTTGGGGCCATCTGTCTGGTTAGATTCATATAAATGGTTATACCTGTACTAAAAGCTTAGGTTGGGGGATGATTCCCTCTGGGTAACATAGTTTTCTTATAAGAATGGTTACGAAGCCTAGCCATGACAGGATCTCTTTTCTTCGACGTTTTATTTTACGTTCTGTTTCCTTATTATGTGAAAAACCCAGCAATTGTGTTCAAATTTCCTCTCCCGCTAATCACCCCTTCATTAGCAATGAAGAGTGAGTTCTATCCTAAGATGTTTAAGGGAGCTTAATTTATAACATAGCATTTGCTTATGTGGAGGGAAGAATTTCAATATTCAATAATTTTAGTTCCATCCATTTGAAATGCATTTGCTAAGCTTATATTTATTATAGTTTATTATAATTTCATTTTTACTTTTACTTTTACTATTAATATTGCTATATAATTGGTAGTGTAACGGAGGATGTGCTAATACAAAAAATTCAGCTTTAGTTTGAGTGGGGCTGTGGCTCCATTGTTCTTCTAGTTTTACACTTGGATTTGCATTTATAA

mRNA sequence

TGGGCCGACCCGGATTTGAAAGCCCGAACACTGAACCTTGAAAGGGCTTCTTCGTTCTAAATCGCGGCGGAGGCGGTGTTGTGTGTGCCTTATTCTTCGTCCAGATTTTCCCAATTTCACGCTCTTTTTCTTCCTTCTCCTCCTCTCTTCATCCCTGCAACATATTCTCTCACACCATTCTCTAGTTTCAACTTCTCAATTCATCTTCTACCAAAATGCAAGGAGGAGAAGATGTAAGCATGGAAGAGTTGGCTACTAATCTCTCTACCTACAAAGACCAGCTTCAGCAGGTCAGGGAGCTGTTAGATGATGATCCTGGCAACTCTGAGTACATAGATATGGAAAAGGAGCTTGAAGAGGTTATCGCCTTGACGGAAGAGCTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACTGGTGATGACAGTGCATCAATTAGTTTCCAGCAGACTAAAGGAAATAAGATGGAAGCTGAAAGCATGTCTGACTATCACGAAAAATTTCCTATTGGAACAAAAGTTCAAGCTGTTTGGAGCGAGGATGGGGAGTGGTACGATGCTACAATTGAAGCCCATACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCTAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAACAGGCTATCAAGCGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCACGAAATTTACCATCAAGGCTTCGAATTGAACCTGATGATCCTGAGGATGTAAAAGCCACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAGAATAAACGGCAGAATGCTTGGCAGCAGTTTCAGTCAGCAAAAGGCAAGTCTAAGAAGATTGGCTTCTTCTCTGGGCGCAAGAAGGAGAGCATTTTCAAGTCTCCTGATGATCCAAATGGCAAGGTTGGTGTGACTGGAAGTGGCAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCATCAGTGGAGATGGATGATTAAGGGCAGGTCAGATTTTGTAGGTTGCTGCTTTCTTTGTATGTATCTTCATTTAGTATCCATTTGGGGCCATCTGTCTGGTTAGATTCATATAAATGGTTATACCTGTACTAAAAGCTTAGGTTGGGGGATGATTCCCTCTGGGTAACATAGTTTTCTTATAAGAATGGTTACGAAGCCTAGCCATGACAGGATCTCTTTTCTTCGACGTTTTATTTTACGTTCTGTTTCCTTATTATGTGAAAAACCCAGCAATTGTGTTCAAATTTCCTCTCCCGCTAATCACCCCTTCATTAGCAATGAAGAGTGAGTTCTATCCTAAGATGTTTAAGGGAGCTTAATTTATAACATAGCATTTGCTTATGTGGAGGGAAGAATTTCAATATTCAATAATTTTAGTTCCATCCATTTGAAATGCATTTGCTAAGCTTATATTTATTATAGTTTATTATAATTTCATTTTTACTTTTACTTTTACTATTAATATTGCTATATAATTGGTAGTGTAACGGAGGATGTGCTAATACAAAAAATTCAGCTTTAGTTTGAGTGGGGCTGTGGCTCCATTGTTCTTCTAGTTTTACACTTGGATTTGCATTTATAA

Coding sequence (CDS)

ATGCAAGGAGGAGAAGATGTAAGCATGGAAGAGTTGGCTACTAATCTCTCTACCTACAAAGACCAGCTTCAGCAGGTCAGGGAGCTGTTAGATGATGATCCTGGCAACTCTGAGTACATAGATATGGAAAAGGAGCTTGAAGAGGTTATCGCCTTGACGGAAGAGCTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTAGAAACTGGTGATGACAGTGCATCAATTAGTTTCCAGCAGACTAAAGGAAATAAGATGGAAGCTGAAAGCATGTCTGACTATCACGAAAAATTTCCTATTGGAACAAAAGTTCAAGCTGTTTGGAGCGAGGATGGGGAGTGGTACGATGCTACAATTGAAGCCCATACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCTAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAACAGGCTATCAAGCGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCACGAAATTTACCATCAAGGCTTCGAATTGAACCTGATGATCCTGAGGATGTAAAAGCCACCAAACGCAAGAAAATACATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACCCAGAATAAACGGCAGAATGCTTGGCAGCAGTTTCAGTCAGCAAAAGGCAAGTCTAAGAAGATTGGCTTCTTCTCTGGGCGCAAGAAGGAGAGCATTTTCAAGTCTCCTGATGATCCAAATGGCAAGGTTGGTGTGACTGGAAGTGGCAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCATCAGTGGAGATGGATGATTAA

Protein sequence

MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD

Homology

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy Swiss-Prot
Match: Q6DEY1 (Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=8364 GN=smndc1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.0e-18
Identity = 89/285 (31.23%), Postives = 134/285 (47.02%), Query Frame = 0


Query: 10  EELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L+ YK QLQQV   L  +  N + + ++K+L+EVI LT++LLS+          
Sbjct: 3   EDLAKQLAGYKAQLQQVESALTANGENEDLLKLKKDLQEVIELTKDLLSSQPS------- 62

Query: 70  VETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
            ET DD+               +  +   + + +G K  AVWS+DG+WY+A I E    N
Sbjct: 63  -ETADDACD-------------DMSASGSQSWKVGEKCMAVWSDDGQWYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N+R ++       E  +  E                   S 
Sbjct: 123 GTAAITFAGYGNAEVTSLLNLRPVE-------EGRKAKE------------------DSG 182

Query: 190 NLPSRLRIEPDDPEDVKATKR-KKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSK 249
           NLP   +      E + A +  KK  A K   RI++LE  +  ++  WQQF + A  K+K
Sbjct: 183 NLPMSKK------EMIAAQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNKAYSKNK 230

Query: 250 KIGFFSGRKKESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
           K     G+ K SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 K-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy Swiss-Prot
Match: O75940 (Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=SMNDC1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16
Identity = 85/284 (29.93%), Postives = 134/284 (47.18%), Query Frame = 0


Query: 10  EELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+EVI LT++LLST     ++ S+
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSD 62

Query: 70  VETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
                     SF  T+               + +G K  AVWSEDG+ Y+A I E    N
Sbjct: 63  ----------SFASTQPT-----------HSWKVGDKCMAVWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N++ ++    A  ++     + K+ I ++            
Sbjct: 123 GTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ------------ 182

Query: 190 NLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
                           +  K+KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 ----------------REYKKKK--ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKKESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ K SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy Swiss-Prot
Match: Q5R591 (Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-16
Identity = 84/284 (29.58%), Postives = 134/284 (47.18%), Query Frame = 0


Query: 10  EELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+EVI LT++LLST     ++ S+
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSD 62

Query: 70  VETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
                     SF  T+               + +G K  A+WSEDG+ Y+A I E    N
Sbjct: 63  ----------SFASTQPT-----------HSWKVGDKCMAIWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N++ ++    A  ++     + K+ I ++            
Sbjct: 123 GTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ------------ 182

Query: 190 NLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
                           +  K+KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 ----------------REYKKKK--ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKKESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ K SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy Swiss-Prot
Match: Q3T045 (Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.0e-16
Identity = 83/284 (29.23%), Postives = 134/284 (47.18%), Query Frame = 0


Query: 10  EELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+EVI LT++LLST     ++ S+
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSD 62

Query: 70  VETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
                     +F  T+               + +G K  A+WSEDG+ Y+A I E    N
Sbjct: 63  ----------NFASTQPT-----------HSWKVGDKCMAIWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N++ ++    A  ++     + K+ I ++            
Sbjct: 123 GTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ------------ 182

Query: 190 NLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
                           +  K+KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 ----------------REYKKKK--ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKKESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ K SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy Swiss-Prot
Match: Q8BGT7 (Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=Smndc1 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-15
Identity = 84/284 (29.58%), Postives = 133/284 (46.83%), Query Frame = 0


Query: 10  EELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+EVI LT++LLST     ++ S+
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSD 62

Query: 70  VETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDATI-EAHTVN 129
                     SF  T+               + +G K  AVWSEDG+ Y+A I E    N
Sbjct: 63  ----------SFASTQPT-----------HSWKVGDKCMAVWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAASVDFQSR 189
           G   +++  +GN E     N++ ++    A  ++     + K+ I ++            
Sbjct: 123 GTAAITFAVYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQ------------ 182

Query: 190 NLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
                           +  K+KK  A K   RI++LE  +  ++  WQQF + A  K+KK
Sbjct: 183 ----------------REYKKKK--ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKKESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ K SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cp4.1LG01g17210 vs. NCBI nr
Match: XP_022933076.1 (survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022998367.1 survival of motor neuron-related-splicing factor 30 [Cucurbita maxima] >XP_023530530.1 survival of motor neuron-related-splicing factor 30 [Cucurbita pepo subsp. pepo] >KAG6601669.1 Survival of motor neuron-related-splicing factor 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 575 bits (1483), Expect = 1.14e-206
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299
           KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Cp4.1LG01g17210 vs. NCBI nr
Match: KAG7032438.1 (Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 560 bits (1443), Expect = 3.46e-200
Identity = 298/323 (92.26%), Postives = 298/323 (92.26%), Query Frame = 0


Query: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEV----------- 60
           MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEV           
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVVYFCPPRYILT 60

Query: 61  -------------IALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMSD 120
                        IALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESM D
Sbjct: 61  ATWTWAKVAVMQVIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMCD 120

Query: 121 YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN 180
           YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN
Sbjct: 121 YHEKFPIGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN 180

Query: 181 ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKS 240
           ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKS
Sbjct: 181 ALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKS 240

Query: 241 KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGK 299
           KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGK
Sbjct: 241 KMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGK 300

[Close]

BLAST of Cp4.1LG01g17210 vs. NCBI nr
Match: XP_004142808.1 (survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus] >KGN51867.2 hypothetical protein Csa_008126 [Cucumis sativus])

HSP 1 Score: 548 bits (1413), Expect = 5.34e-196
Identity = 282/299 (94.31%), Postives = 293/299 (97.99%), Query Frame = 0


Query: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQL QVR+LLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNE+SGSNVETGDDSASI FQQ+K N+MEA SMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEVSGSNVETGDDSASIGFQQSKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN LLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNPLLEAERVAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQ+A
Sbjct: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQTA 240

Query: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMD+
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of Cp4.1LG01g17210 vs. NCBI nr
Match: XP_038876515.1 (survival of motor neuron-related-splicing factor 30 [Benincasa hispida])

HSP 1 Score: 547 bits (1410), Expect = 1.53e-195
Identity = 283/299 (94.65%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEI GSNVETGDDSASISF Q K N+MEA SMSDYHEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEIPGSNVETGDDSASISFHQPKENEMEAGSMSDYHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVR IQLEVNALLEAER+AEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRAIQLEVNALLEAERVAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMD+
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of Cp4.1LG01g17210 vs. NCBI nr
Match: XP_022155149.1 (survival of motor neuron-related-splicing factor 30 [Momordica charantia])

HSP 1 Score: 538 bits (1386), Expect = 6.95e-192
Identity = 278/299 (92.98%), Postives = 291/299 (97.32%), Query Frame = 0


Query: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA+NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEEVI+LTEELL+TA
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGD+SASISF Q+K  KMEAES+SD+HEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAERMAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLP +LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMDD
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy TrEMBL
Match: A0A6J1K7R2 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 GN=LOC111493029 PE=4 SV=1)

HSP 1 Score: 575 bits (1483), Expect = 5.54e-207
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299
           KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy TrEMBL
Match: A0A6J1EY48 (survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=3662 GN=LOC111439780 PE=4 SV=1)

HSP 1 Score: 575 bits (1483), Expect = 5.54e-207
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299
           KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy TrEMBL
Match: A0A6J1DPE2 (survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=3673 GN=LOC111022290 PE=4 SV=1)

HSP 1 Score: 538 bits (1386), Expect = 3.37e-192
Identity = 278/299 (92.98%), Postives = 291/299 (97.32%), Query Frame = 0


Query: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA+NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEEVI+LTEELL+TA
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGD+SASISF Q+K  KMEAES+SD+HEKFPIG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180
           TIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAERMAEATKQAIKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLP +LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMDD
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy TrEMBL
Match: A0A1S3CE07 (survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 479 bits (1233), Expect = 2.30e-169
Identity = 246/256 (96.09%), Postives = 252/256 (98.44%), Query Frame = 0


Query: 44  KELEEVIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPI 103
           KELEEVIALTEELLSTAKQNE+SGSNVETGDDSASI FQQ K N+MEA SMSDYHEKFPI
Sbjct: 14  KELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPI 73

Query: 104 GTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER 163
           GTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER
Sbjct: 74  GTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAER 133

Query: 164 MAEATKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQL 223
           MAEATKQAIKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQL
Sbjct: 134 MAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQL 193

Query: 224 EVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQK 283
           EVTQNKRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQK
Sbjct: 194 EVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQK 253

Query: 284 REKHLHLKGASVEMDD 299
           REKHLHLKGA+VEMD+
Sbjct: 254 REKHLHLKGATVEMDE 269

[Close]

BLAST of Cp4.1LG01g17210 vs. ExPASy TrEMBL
Match: A0A1S3CD96 (survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 471 bits (1213), Expect = 3.07e-166
Identity = 241/252 (95.63%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 48  EVIALTEELLSTAKQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKV 107
           +VIALTEELLSTAKQNE+SGSNVETGDDSASI FQQ K N+MEA SMSDYHEKFPIGTKV
Sbjct: 23  QVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKV 82

Query: 108 QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA 167
           QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA
Sbjct: 83  QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA 142

Query: 168 TKQAIKRKIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 227
           TKQAIKRKIAQAASVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ
Sbjct: 143 TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 202

Query: 228 NKRQNAWQQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 287
           NKRQNAWQQFQSAKGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH
Sbjct: 203 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 262

Query: 288 LHLKGASVEMDD 299
           LHLKGA+VEMD+
Sbjct: 263 LHLKGATVEMDE 274

[Close]

BLAST of Cp4.1LG01g17210 vs. TAIR 10
Match: AT2G02570.1 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-105
Identity = 199/305 (65.25%), Postives = 247/305 (80.98%), Query Frame = 0


Query: 3   GGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++S+E+LA+++STYK+QL+QVR+LL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSASISFQQTKGN--------KMEAESMSDYHEKFPIGTKVQAVWSED 122
           NEIS S+       A +S + T G+        K    +   +  KFP+GTKVQAV+S+D
Sbjct: 64  NEISLSD-------AGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDD 123

Query: 123 GEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKR 182
           GEWYDATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KR
Sbjct: 124 GEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKR 183

Query: 183 KIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW 242
           KI +AAS D+Q++ LP++L+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN W
Sbjct: 184 KIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDW 243

Query: 243 QQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAS 300
           QQFQ+ K K+KK+GFF+GRKKESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK  +
Sbjct: 244 QQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGN 299

[Close]

BLAST of Cp4.1LG01g17210 vs. TAIR 10
Match: AT2G02570.2 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-105
Identity = 199/305 (65.25%), Postives = 247/305 (80.98%), Query Frame = 0


Query: 3   GGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++S+E+LA+++STYK+QL+QVR+LL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSASISFQQTKGN--------KMEAESMSDYHEKFPIGTKVQAVWSED 122
           NEIS S+       A +S + T G+        K    +   +  KFP+GTKVQAV+S+D
Sbjct: 64  NEISLSD-------AGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDD 123

Query: 123 GEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKR 182
           GEWYDATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KR
Sbjct: 124 GEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKR 183

Query: 183 KIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW 242
           KI +AAS D+Q++ LP++L+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN W
Sbjct: 184 KIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDW 243

Query: 243 QQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAS 300
           QQFQ+ K K+KK+GFF+GRKKESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK  +
Sbjct: 244 QQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGN 299

[Close]

BLAST of Cp4.1LG01g17210 vs. TAIR 10
Match: AT2G02570.4 (nucleic acid binding;RNA binding )

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-105
Identity = 199/305 (65.25%), Postives = 247/305 (80.98%), Query Frame = 0


Query: 3   GGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++S+E+LA+++STYK+QL+QVR+LL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSASISFQQTKGN--------KMEAESMSDYHEKFPIGTKVQAVWSED 122
           NEIS S+       A +S + T G+        K    +   +  KFP+GTKVQAV+S+D
Sbjct: 64  NEISLSD-------AGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDD 123

Query: 123 GEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKR 182
           GEWYDATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KR
Sbjct: 124 GEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKR 183

Query: 183 KIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW 242
           KI +AAS D+Q++ LP++L+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN W
Sbjct: 184 KIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDW 243

Query: 243 QQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAS 300
           QQFQ+ K K+KK+GFF+GRKKESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK  +
Sbjct: 244 QQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGN 299

[Close]

BLAST of Cp4.1LG01g17210 vs. TAIR 10
Match: AT2G02570.3 (nucleic acid binding;RNA binding )

HSP 1 Score: 353.2 bits (905), Expect = 2.0e-97
Identity = 189/305 (61.97%), Postives = 237/305 (77.70%), Query Frame = 0


Query: 3   GGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++S+E+LA+++STYK+QL+QVR+LL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSASISFQQTKGN--------KMEAESMSDYHEKFPIGTKVQAVWSED 122
           NEIS S+       A +S + T G+        K    +   +  KFP+GTKVQAV+S+D
Sbjct: 64  NEISLSD-------AGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDD 123

Query: 123 GEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKR 182
           GEWYDATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK A+KR
Sbjct: 124 GEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKR 183

Query: 183 KIAQAASVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAW 242
           KI +AAS D+Q++ LP++L+I+P+DPEDVK  KRKKIH            V QNK+QN W
Sbjct: 184 KIEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIH------------VVQNKKQNDW 243

Query: 243 QQFQSAKGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGAS 300
           QQFQ+ K K+KK+GFF+GRKKESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK  +
Sbjct: 244 QQFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGN 287

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DEY1	7.0e-18	31.23	Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=836...	[more]
O75940	1.7e-16	29.93	Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=S...	[more]
Q5R591	2.2e-16	29.58	Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=S...	[more]
Q3T045	5.0e-16	29.23	Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMN...	[more]
Q8BGT7	1.9e-15	29.58	Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=...	[more]

BLAST of Cp4.1LG01g17210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933076.1	1.14e-206	100.00	survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022...	[more]
KAG7032438.1	3.46e-200	92.26	Survival of motor neuron-related-splicing factor 30 [Cucurbita argyrosperma subs...	[more]
XP_004142808.1	5.34e-196	94.31	survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus]...	[more]
XP_038876515.1	1.53e-195	94.65	survival of motor neuron-related-splicing factor 30 [Benincasa hispida]	[more]
XP_022155149.1	6.95e-192	92.98	survival of motor neuron-related-splicing factor 30 [Momordica charantia]	[more]

BLAST of Cp4.1LG01g17210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7R2	5.54e-207	100.00	survival of motor neuron-related-splicing factor 30 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EY48	5.54e-207	100.00	survival of motor neuron-related-splicing factor 30 OS=Cucurbita moschata OX=366...	[more]
A0A6J1DPE2	3.37e-192	92.98	survival of motor neuron-related-splicing factor 30 OS=Momordica charantia OX=36...	[more]
A0A1S3CE07	2.30e-169	96.09	survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo O...	[more]
A0A1S3CD96	3.07e-166	95.63	survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo O...	[more]

BLAST of Cp4.1LG01g17210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02570.1	3.5e-105	65.25	nucleic acid binding;RNA binding	[more]
AT2G02570.2	3.5e-105	65.25	nucleic acid binding;RNA binding	[more]
AT2G02570.4	3.5e-105	65.25	nucleic acid binding;RNA binding	[more]
AT2G02570.3	2.0e-97	61.97	nucleic acid binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..178
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	GENE3D	2.30.30.140		coord: 95..152 e-value: 5.4E-11 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..276
None	No IPR available	PANTHER	PTHR13681	SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED	coord: 1..292
None	No IPR available	PANTHER	PTHR13681:SF32	BNAA06G34090D PROTEIN	coord: 1..292
None	No IPR available	SUPERFAMILY	63748	Tudor/PWWP/MBT	coord: 100..151
IPR002999	Tudor domain	SMART	SM00333	TUDOR_7	coord: 99..156 e-value: 1.7E-11 score: 54.2
IPR002999	Tudor domain	PROSITE	PS50304	TUDOR	coord: 100..158 score: 13.444279
IPR002999	Tudor domain	CDD	cd04508	TUDOR	coord: 104..149 e-value: 9.30718E-11 score: 54.1411
IPR010304	Survival motor neuron	PFAM	PF06003	SMN	coord: 62..157 e-value: 1.2E-7 score: 31.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17210.1	Cp4.1LG01g17210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding