Cp4.1LG01g16830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g16830
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionsuccinate dehydrogenase assembly factor 2, mitochondrial
LocationCp4.1LG01: 10574696 .. 10579637 (-)
RNA-Seq ExpressionCp4.1LG01g16830
SyntenyCp4.1LG01g16830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAATGATTTAGTAGATTAACGTAATATAGTTGTCCTCTTTATGTGTCTTATATTTGTCCTCTTGATGTTCCTTTCAGATGGAAACCCAGCTTCATGAACAAATTCTCATGAATTGGTTTCTATTGGTCAGGGTTTCGAGCTCAGGAGGGGGAGGAAGGGAACGTTTGAAGGTGAAGAAAGGCGAGATATGGTCTCATATAAAAAGGAAACAAGAAGAACCTACTGACCTTACTCCAAAGTTGTTATTACGACCTTTGGTTAAAAGAGGATTTCAAAACTAGATAAGAGGAAGAATTTTGAATGTGAATGGAACATCAAACCACATTCATCTCACTTCTCCTTTTTAAACTTTGAATTTTGAACTTATTTTTAGAGCTTACAAAAACATTTTATTTGAATTTTGAACTTATTTTTAGACCTTATTTGAACTTATTTTTAGTCTCAACCAGAAATTAAATATCTGATTTTTTTTTTTCTTATTAAGTTTGGAAGAAAAATGTTTTAAATTTTTTTCATATTAAAAAGAAAAAATTAAAAAATTGAGTCAAAATCACTCAAAGGGGTAAAATGGTCATATTGAGTAGGCTGGACAAAACCCCAATCACTAGGTCTCTAGACTCTCTACGCGTTCCCCCCTCTGGCCATAACCCGTTTCGTGTATTGGGCAGACATAGGCCACAACAACCACTGCTTCGATTCTCTCCTGTTCCTGCAACCACCACACACAACGTCTCCCTTCTCCACTTTCTCTCTTCCACACCTTTCATTCTTCCTCCGGATTCCTTCTCCCTTCTCTCCCGCCAACGCCAACGCCAACGCCAACGCCAACGCCAACGCCAACCACGCCAACCACCTCTTCTTCCGGATACGACGTTTGCTTCTCTTCTGCCCTTTAATTTTCTTCTTCTTTTCCCAATCCTCTTATTATAGTTTTCAAAACACGAATGGCGACGTTCAGAAGGGCTGTACTCAAAGCTCATCAAGTTCTGTACCTGAAACCCTCCTCCACCGTTTTCAGAAGCAAATCGATGACCCTTTTGCCTACCGCTTATATATTGTTGGAGAATCTACAAGGGCGATTACCAAATCGCAATCAGAATCAACATGGTTCTTTCTTTCGTTTTCGTTGCTCTTCCACGACTGTAAATCCTTTTTTCACAGATATCGATCTCTCAAATGAAGAGAGCAAGAGGCGTTTGTTCAATAGGTTCAATCTCACTTCCTTTGCATCATTAACTTTCATACCCCCCTTGCTTTCTTTCTCTTAATTTTTTTGGCAATTTTGTTTCGATTGACAAGGTTTTTTGGTTGTTGGATTCAACAGGTTGCTGTACCGGAGCAAACAACGGGGGTTTTTGGAACTGGATTTGGTACTTGGAAAATGGGTAGAAGATCACATCAATTCCTTGGATGCAGATGGTATTAGAGCTCTAATTAAAGTTCTTGACCTGGTAATCTAGTCTTATGCCCATATTTTATAGTTATTTTCTATGTTTTGTGTTCTAGCCCTAGTTAGTTTTAATCCATAGCTGGGTGGAGGCCTTAGTGCCACATGGAATGTTTCGTCTTTTTTCGTCATGTATTTGCCCAAATTTTGCACCATGATTTTCTATGTCACCTTCTCATCAATGAGGGCAGATTGATAGTGATGGTTCTGGTCAATCTGGTCAATCTTCATCCCATTCTTATCCCTCCCTCGTGGGGCGGCATTCCGAGCTTGAATGTAGCTCTGAGAAATGAGAGAAGAAAGAAAACATTAAAGAATCCACTTTTGTTATTATGGAGTTGATTTGCACCTGCATAAAAATTTCAGGCCAAGACAAGTTCAAGGTTTTTATGAGCCACATTTGGACACAATTGTTCAAACGATGAGTCACTGAATGGCAGAAAAGCACAGCATATGATGCAAACATGCAAAAAACCGGAGGAGGATGTGTTGTGGCATATCTTTACCGCTGAAAAGATGATGACAAGGGCACGTTGGGTTTCTCAAGCCAAATTTTTGTATAATATGGGAGGGTACTAGTGAGGAATATATTGGAAATATTAGTAAGATAATAGTAAGGGGTTAAGTGGTAATTAGTTTGATGAAGGGGGGTTTGGGTTATAAATTAAGAGGACTCGAAGTTTCTGGGAGGGTAAATCATTTTGGGGAGTGTCCATTTTGGGACTTGGGAAAGAGACGGCCCTCTGAAATATTTTCATTGATATTGCAACATAGTTATAGCTATATTTCTATTTTCTGTTGTGATCTTGTGTTCAGGTACCTAATGAATTGGTATTAGAGCACGTTCATCTTGGAGTTGAAAAATATGACTAAAAAGGGATTAGAAGAGAGGGTGGAAGCTACTGGAAGGACATTGCCGAGCTTAAAGGCATGCTGCAAACAATGACTCAAGACTGAGTAGTTGGCAATGGATATACATGAGAGTTCAAGTTCGACATGGGTGATTGTGGTGATTATGTCGGTTCCCCACAAAAGTAGTAAATGCTAGAGGAATGATGAATTTAAAATCTCTATAGTACCGGAGGGAAGGGAATCTATTAAGACAAGAAGTTATTGGTGGAATCGGAGATGATGGGGACGAGTGTAACACTTGAGTAAATGAGGGGTATGAATGACTGATACCACATCCAAAGGAGAACAATCTTGAGAATAGGATGGTTAAGGAAAGCTTAAAAAACTGAAAGTAACTTCATAATTAAGCATGGTTTGCTTGGAGCAATTCTATATTGGGTGATCTACTAGGACTTTTCGTACATGTAAGTGAGGACAAGCATGTTGGAAGGGCTTTTGTTAGTTTGTAGGGATAGCCTTCACTCTTAAAAGTGAGGAGCAAGTAACATGATCATGTCGCAGAGGATGTAAGGGAATATGCTAGAGCCATCATGTGCCAAATCCGGATTCCAAATCTTAATCCGATTGTTGACTGTCTCTTGGTTAGAAAGGTGATATGGACGACGTCAACGAAGTAAATGCCATATGAAAAGTGGAGAGAAGAAGTGACAATGATAGAATCTAAAGAGTTTGGCAAGTTTATGGTCTGAGAAGACATGATCATGTCGCAGAGGATGTAAGGGAATATGCTAGAGCCATCATGTGCCAAATCCGGATTCCAAATCTTAATCCGATTGTTGACTGTCTCTTGGTTAGAAAGGTGATATGGACGACGTCAACGAAGTAAATGCCATATGAAAAAAGTGGAGAGAAGAAGTGACAATGATAGAATCCAAGTTTATGGTCTGAGAAGTAATAAGGTAGGCGATCAAGAAGCAATGGAGGAAAGAAGAAAGATATAGCCGATGAGAAGGTGAGGTGGCTAACAGATGAAGAAACGATGAAGTAAGGACAAACATTGTGGAGATGTTGAGTTTGACCAACTATCTGTTTCATAAACCTCCAATTCCATAAACATTGTCGTGAGTTTGTCAAAACTTTGGGCGTGGAGTATTGATAAACCTCAAATTCCACCAACTATCCATTATTTATTTATTTATTCAAGAAGGAAAAAAGACAACAACATCATCAATCTTGAAGGAAGTTGAATGGAGAAGTTGGGGTTTCTGTCATGTGGGGTCAAAGGCGGTTATTAGAAGTTATATGTTTGTGTGTTGTTGGCTATGTTTTGTGTGGGGAGAGTCCCCATCTCTTGAATGTTTAGGTTGTATACAACTTTATCTTGAATGTCTACAAATAATCCTCACTTCACTATTCAACTGTCAACACCCATTCTTAGGAAGGTTGACAGATAGTTGGAGATCCACTACAAAAACGAATAATAGTAAACTCACCGATTATGGAGAGAGTTGGATTAGATTGTGAAGTTTATTCGGGTCATCATTTTTGGGTTGGTCAAATAATTTTTCCCAACCCAACCTTACCCGTCCACACTCCTACTCATTTCTATCCCCTTGGCCAGCTATTCTAGGGCCTTCATGGCACTAGTCCACTAACTATTAAAATCAAGGGTAACCGCCAATGCCTGGTGACAAAGGGAATGGTGGAGGAGATAGTTTCAATAAGTGTGAAAGTTACATCAATGGGTAGTAAAATCGTGGGGAAGGGTTTGAGTTAGTGTTCCTTACCAACAAAATAGGTGATTTCAGTTCAGTCCATCTGCAGAAACTGGGTATTGGTGATTTCAGTTTCTCATTTTTTTTTTTTCATTCTTTTAAATCTATTGTAAATGATTTTGAGGACTACTTTTTTGGATACTGCTTATTTCTTTTGCAAGTATCTGTATGTGTGTTCTTCTGTTGTTCAGGAAAATCCAGATCTATGGAAGTGGTTAACTGGCCAAGAGCAACCCCCTGAAGCCGTGAAGACAAATCCTGTGAGCATCCAAACTAGTGTTTCCCTTTTTATGTTTGGACTAAAAAATATGTGATGTTAGAATTAGAGCATCTATTTGTAGGTATTTACTGATGTGCAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCCGAGACACGAACACCGCCTGGGCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAGAGGTCGGGATGGCCCCATAACAGGAAACCAGTAGCTCTGTCTTCCATTAAAGAATTTTATGTTATAAGTACTGCAGTTTCTCAAACTTGTTTGTTACGAATGGTCGGCTGTGAATAAGTTTCCCATCAAGTCTCTCCCCTCTAAACCCTTGGGATCTATAGTGAAATAATGGCTGTTTTTTTTCTTTCACATACATTCACCAAATAATTCATCATTTCCAAGTGCTTGCCACCATGGCTAGCTTGCATTTCTTTATAGTTTGTACTTGATGTAATAAGCTTTGTATTAATTTTATAGTTTGCATTAGTGTTACGACCTTCAATGATCTACCTCATAAACTATTGGGTCATAAACCATCCGTAGTATGAGTGAGTATAAAATATTCAATGTAGAATTATTCATGTTATGG

mRNA sequence

ATGGGTTTCGAGCTCAGGAGGGGGAGGAAGGGAACGTTTGAAGTTTTCAAAACACGAATGGCGACGTTCAGAAGGGCTGTACTCAAAGCTCATCAAGTTCTGTACCTGAAACCCTCCTCCACCGTTTTCAGAAGCAAATCGATGACCCTTTTGCCTACCGCTTATATATTGTTGGAGAATCTACAAGGGCGATTACCAAATCGCAATCAGAATCAACATGGTTCTTTCTTTCGTTTTCGTTGCTCTTCCACGACTGTAAATCCTTTTTTCACAGATATCGATCTCTCAAATGAAGAGAGCAAGAGGCGTTTGTTCAATAGGTTGCTGTACCGGAGCAAACAACGGGGGTTTTTGGAACTGGATTTGGTACTTGGAAAATGGGTAGAAGATCACATCAATTCCTTGGATGCAGATGGTATTAGAGCTCTAATTAAAGTTCTTGACCTGGAAAATCCAGATCTATGGAAGTGGTTAACTGGCCAAGAGCAACCCCCTGAAGCCGTGAAGACAAATCCTGTATTTACTGATGTGCAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCCGAGACACGAACACCGCCTGGGCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAGAGGTCGGGATGGCCCCATAACAGGAAACCAGTAGCTCTGTCTTCCATTAAAGAATTTTATGTTATAAGTACTGCAGTTTCTCAAACTTGTTTGTTACGAATGGTCGGCTGTGAATAAGTTTCCCATCAAGTCTCTCCCCTCTAAACCCTTGGGATCTATAGTGAAATAATGGCTGTTTTTTTTCTTTCACATACATTCACCAAATAATTCATCATTTCCAAGTGCTTGCCACCATGGCTAGCTTGCATTTCTTTATAGTTTGTACTTGATGTAATAAGCTTTGTATTAATTTTATAGTTTGCATTAGTGTTACGACCTTCAATGATCTACCTCATAAACTATTGGGTCATAAACCATCCGTAGTATGAGTGAGTATAAAATATTCAATGTAGAATTATTCATGTTATGG

Coding sequence (CDS)

ATGGGTTTCGAGCTCAGGAGGGGGAGGAAGGGAACGTTTGAAGTTTTCAAAACACGAATGGCGACGTTCAGAAGGGCTGTACTCAAAGCTCATCAAGTTCTGTACCTGAAACCCTCCTCCACCGTTTTCAGAAGCAAATCGATGACCCTTTTGCCTACCGCTTATATATTGTTGGAGAATCTACAAGGGCGATTACCAAATCGCAATCAGAATCAACATGGTTCTTTCTTTCGTTTTCGTTGCTCTTCCACGACTGTAAATCCTTTTTTCACAGATATCGATCTCTCAAATGAAGAGAGCAAGAGGCGTTTGTTCAATAGGTTGCTGTACCGGAGCAAACAACGGGGGTTTTTGGAACTGGATTTGGTACTTGGAAAATGGGTAGAAGATCACATCAATTCCTTGGATGCAGATGGTATTAGAGCTCTAATTAAAGTTCTTGACCTGGAAAATCCAGATCTATGGAAGTGGTTAACTGGCCAAGAGCAACCCCCTGAAGCCGTGAAGACAAATCCTGTATTTACTGATGTGCAAGAGAAGGTGATGAACAATCTCAACAAACATGCCTCACCCGAGACACGAACACCGCCTGGGCAACAATGGGTAAGGGGTTGGGATGATTTCAAGAGAGGTCGGGATGGCCCCATAACAGGAAACCAGTAG

Protein sequence

MGFELRRGRKGTFEVFKTRMATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRFRCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQQWVRGWDDFKRGRDGPITGNQ
Homology
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BLAST of Cp4.1LG01g16830 vs. ExPASy Swiss-Prot
Match: Q9FI44 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDHAF2 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.5e-57
Identity = 119/201 (59.20%), Postives = 149/201 (74.13%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MAT R+A++  H++  ++ ++ V RS   +++P A     N    +  RN    G+  RF
Sbjct: 1   MAT-RKALINVHRI--IRSTAVVGRS---SIIPAA----ANRSYPIIFRNGVDLGA--RF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
            C +T     F DIDLSNEE+KRR  NRLLYRSKQRGFLELDLVLG WVE+++NS+D +G
Sbjct: 61  FCENTASAQNF-DIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           +++LI VL+LENPDLWKWLT QEQPPEAV +NPVF+ + EKVM NLNKHA+PETR   GQ
Sbjct: 121 VKSLIHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 221
            WVRGWDDFKRGRD PI+GNQ
Sbjct: 181 PWVRGWDDFKRGRDAPISGNQ 188

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy Swiss-Prot
Match: P0CR33 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=CNBA4490 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 25/85 (29.41%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 99  ESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALIKVLDLENPDLWKWL 158
           E ++ L  RL+Y++++RG LE DL+L  +  D + ++D + ++   K+LD  + D++ W 
Sbjct: 73  EDEKTLRARLIYQTRKRGTLETDLILSTFARDELPNMDFEEMKQFDKLLDEPDWDIFYWS 132

Query: 159 TGQEQPPEAVKTNPVFTDVQEKVMN 184
             +  PP   K  P+   +Q+   N
Sbjct: 133 VKKRDPPARWKGTPLLEKLQKHAKN 157

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy Swiss-Prot
Match: P0CR32 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=CNA04680 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 25/85 (29.41%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 99  ESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALIKVLDLENPDLWKWL 158
           E ++ L  RL+Y++++RG LE DL+L  +  D + ++D + ++   K+LD  + D++ W 
Sbjct: 73  EDEKTLRARLIYQTRKRGTLETDLILSTFARDELPNMDFEEMKQFDKLLDEPDWDIFYWS 132

Query: 159 TGQEQPPEAVKTNPVFTDVQEKVMN 184
             +  PP   K  P+   +Q+   N
Sbjct: 133 VKKRDPPARWKGTPLLEKLQKHAKN 157

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy Swiss-Prot
Match: Q10440 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=emi5 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 26/88 (29.55%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 99  ESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALIKVLDLENPDLWKWL 158
           E++  +  RL Y+S++RG LE DL+L  + +D I+      +R   ++LD  + D+  W 
Sbjct: 43  ETRDAMLARLKYQSRKRGILETDLLLSNFAKDQIDKYPVSLLREYDQLLDEPDWDILYWC 102

Query: 159 TGQEQPPEAVKTNPVFTDVQEKVMNNLN 187
           +G+ + PE  K++ VF ++ +   +  N
Sbjct: 103 SGEREAPEKWKSSQVFKELSKYCRSQRN 130

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy Swiss-Prot
Match: B6JZ70 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=SJAG_01895 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 24/83 (28.92%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 97  NEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALIKVLDLENPDLWK 156
           ++E+++ L +RL+Y+S++RG LE DL+L  + +++++  + + ++    +L+  + D+  
Sbjct: 46  SKETEKLLRSRLVYQSRKRGILETDLILSGFAKEYLSKYNVELLKEYDNLLNEADWDILY 105

Query: 157 WLTGQEQPPEAVKTNPVFTDVQE 180
           W TG+ Q PE    + V  D++E
Sbjct: 106 WCTGERQAPEHWLNSRVLRDLKE 128

[Close]
BLAST of Cp4.1LG01g16830 vs. NCBI nr
Match: XP_023530673.1 (succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418 bits (1074), Expect = 2.92e-147
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF
Sbjct: 1   MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
           RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ
Sbjct: 121 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 220
           QWVRGWDDFKRGRDGPITGNQ
Sbjct: 181 QWVRGWDDFKRGRDGPITGNQ 201

[Close]
BLAST of Cp4.1LG01g16830 vs. NCBI nr
Match: XP_022930034.1 (succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita moschata])

HSP 1 Score: 405 bits (1041), Expect = 3.15e-142
Identity = 195/201 (97.01%), Postives = 196/201 (97.51%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MATFRRAVLKAHQVLYLKPSSTVFRSKSM LLPTAYILLENLQGRLPN NQNQHG FF F
Sbjct: 1   MATFRRAVLKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
           RCSSTTVNP FTDIDLS+EESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTTVNPLFTDIDLSDEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ
Sbjct: 121 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 220
           QWVRGWDDFKRGRDGPITGNQ
Sbjct: 181 QWVRGWDDFKRGRDGPITGNQ 201

[Close]
BLAST of Cp4.1LG01g16830 vs. NCBI nr
Match: KAG7032455.1 (Succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404 bits (1037), Expect = 1.28e-141
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MATFRRAV+KAHQVLYLKPSSTVFRSKSM LLPTAYILLENLQGRLPN NQNQHG FF F
Sbjct: 1   MATFRRAVVKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
           RCSSTTVNP F DIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTTVNPLFPDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ
Sbjct: 121 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 220
           QWVRGWDDFKRGRDGPITGNQ
Sbjct: 181 QWVRGWDDFKRGRDGPITGNQ 201

[Close]
BLAST of Cp4.1LG01g16830 vs. NCBI nr
Match: XP_022994486.1 (succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 397 bits (1019), Expect = 7.11e-139
Identity = 189/201 (94.03%), Postives = 195/201 (97.01%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MATFRRA++KAH+VLYLKPSSTVFRSKSM LLP+AYILLENLQGRLPN NQNQHG FF F
Sbjct: 1   MATFRRALVKAHEVLYLKPSSTVFRSKSMPLLPSAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
           RCSST+VNP FTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTSVNPLFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           I ALIKVLDLENPDLWKWLTGQEQPP+AVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ
Sbjct: 121 ISALIKVLDLENPDLWKWLTGQEQPPKAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 220
           QWVRGWDDFKRGRDGPITGNQ
Sbjct: 181 QWVRGWDDFKRGRDGPITGNQ 201

[Close]
BLAST of Cp4.1LG01g16830 vs. NCBI nr
Match: KAG6601703.1 (Succinate dehydrogenase assembly factor 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391 bits (1004), Expect = 1.74e-132
Identity = 188/196 (95.92%), Postives = 189/196 (96.43%), Query Frame = 0 

Query: 25  RAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRFRCSST 84
           RAV+KAHQVLYLKPSSTVFRSKSM LLPTAYILLENLQGRLPN  QNQHG FF FRCSST
Sbjct: 281 RAVVKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHIQNQHGCFFSFRCSST 340

Query: 85  TVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALI 144
           TVNP F DIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALI
Sbjct: 341 TVNPLFPDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALI 400

Query: 145 KVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQQWVRG 204
           KVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQQWVRG
Sbjct: 401 KVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQQWVRG 460

Query: 205 WDDFKRGRDGPITGNQ 220
           WDDFKRGRDGPITGNQ
Sbjct: 461 WDDFKRGRDGPITGNQ 476

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy TrEMBL
Match: A0A6J1EQG7 (succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111436468 PE=4 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 1.52e-142
Identity = 195/201 (97.01%), Postives = 196/201 (97.51%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MATFRRAVLKAHQVLYLKPSSTVFRSKSM LLPTAYILLENLQGRLPN NQNQHG FF F
Sbjct: 1   MATFRRAVLKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
           RCSSTTVNP FTDIDLS+EESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTTVNPLFTDIDLSDEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ
Sbjct: 121 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 220
           QWVRGWDDFKRGRDGPITGNQ
Sbjct: 181 QWVRGWDDFKRGRDGPITGNQ 201

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy TrEMBL
Match: A0A6J1JZA0 (succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111490192 PE=4 SV=1)

HSP 1 Score: 397 bits (1019), Expect = 3.44e-139
Identity = 189/201 (94.03%), Postives = 195/201 (97.01%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MATFRRA++KAH+VLYLKPSSTVFRSKSM LLP+AYILLENLQGRLPN NQNQHG FF F
Sbjct: 1   MATFRRALVKAHEVLYLKPSSTVFRSKSMPLLPSAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
           RCSST+VNP FTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTSVNPLFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           I ALIKVLDLENPDLWKWLTGQEQPP+AVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ
Sbjct: 121 ISALIKVLDLENPDLWKWLTGQEQPPKAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 220
           QWVRGWDDFKRGRDGPITGNQ
Sbjct: 181 QWVRGWDDFKRGRDGPITGNQ 201

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy TrEMBL
Match: A0A0A0LKF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072460 PE=4 SV=1)

HSP 1 Score: 339 bits (869), Expect = 2.33e-115
Identity = 165/205 (80.49%), Postives = 181/205 (88.29%), Query Frame = 0 

Query: 16  FKTRMATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGS 75
           F+ +MATF RA+ KAHQVLYLK S T+ RSKSM LLPTA+I L+NLQ  L NRNQN HG 
Sbjct: 64  FERQMATFIRALNKAHQVLYLKASPTILRSKSMPLLPTAFIGLKNLQRELTNRNQNHHGC 123

Query: 76  FFRFRCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSL 135
           F     SST+ NP   DIDLSNE+SKR+LFNRLLYRSKQRGFLELDL+LGKWVEDHI+SL
Sbjct: 124 FSSVHFSSTSTNP---DIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSL 183

Query: 136 DADGIRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRT 195
           DADGIRALI VLDLENPDLWKWLTGQEQPPEA+KTNPVFT V+EKV++NLNKHASPETRT
Sbjct: 184 DADGIRALINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVIDNLNKHASPETRT 243

Query: 196 PPGQQWVRGWDDFKRGRDGPITGNQ 220
           PPGQQWVRGWDDFK+GRDGPITGNQ
Sbjct: 244 PPGQQWVRGWDDFKKGRDGPITGNQ 265

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy TrEMBL
Match: A0A5D3C9Y9 (Succinate dehydrogenase assembly factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001200 PE=4 SV=1)

HSP 1 Score: 334 bits (857), Expect = 1.62e-114
Identity = 162/201 (80.60%), Postives = 175/201 (87.06%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MATF RA+ KAHQVLYLK S T+ RSK M  LP+ +I LENLQ +L NRNQN HG  F  
Sbjct: 3   MATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFSL 62

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
             SST+ NP   DIDLSNE+SKR+LFNRLLYRSKQRGFLELDL+LGKWVEDHI+SLDADG
Sbjct: 63  HFSSTSTNP---DIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADG 122

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           IR LI VLDLENPDLWKWLTGQEQPPEA+KTNPVFT V+EKVMNNLNKHASPETRTPPGQ
Sbjct: 123 IRDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQ 182

Query: 200 QWVRGWDDFKRGRDGPITGNQ 220
           QWVRGWDDFK+GRDGPITGNQ
Sbjct: 183 QWVRGWDDFKKGRDGPITGNQ 200

[Close]
BLAST of Cp4.1LG01g16830 vs. ExPASy TrEMBL
Match: A0A1S3B413 (succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485912 PE=4 SV=1)

HSP 1 Score: 334 bits (857), Expect = 1.62e-114
Identity = 162/201 (80.60%), Postives = 175/201 (87.06%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MATF RA+ KAHQVLYLK S T+ RSK M  LP+ +I LENLQ +L NRNQN HG  F  
Sbjct: 3   MATFIRALSKAHQVLYLKASPTILRSKLMPFLPSVFIGLENLQSQLTNRNQNHHGCSFSL 62

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
             SST+ NP   DIDLSNE+SKR+LFNRLLYRSKQRGFLELDL+LGKWVEDHI+SLDADG
Sbjct: 63  HFSSTSTNP---DIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDADG 122

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           IR LI VLDLENPDLWKWLTGQEQPPEA+KTNPVFT V+EKVMNNLNKHASPETRTPPGQ
Sbjct: 123 IRDLINVLDLENPDLWKWLTGQEQPPEALKTNPVFTGVKEKVMNNLNKHASPETRTPPGQ 182

Query: 200 QWVRGWDDFKRGRDGPITGNQ 220
           QWVRGWDDFK+GRDGPITGNQ
Sbjct: 183 QWVRGWDDFKKGRDGPITGNQ 200

[Close]
BLAST of Cp4.1LG01g16830 vs. TAIR 10
Match: AT5G51040.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631); Has 532 Blast hits to 532 proteins in 207 species: Archae - 0; Bacteria - 285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). )

HSP 1 Score: 223.4 bits (568), Expect = 1.8e-58
Identity = 119/201 (59.20%), Postives = 149/201 (74.13%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MAT R+A++  H++  ++ ++ V RS   +++P A     N    +  RN    G+  RF
Sbjct: 1   MAT-RKALINVHRI--IRSTAVVGRS---SIIPAA----ANRSYPIIFRNGVDLGA--RF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
            C +T     F DIDLSNEE+KRR  NRLLYRSKQRGFLELDLVLG WVE+++NS+D +G
Sbjct: 61  FCENTASAQNF-DIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           +++LI VL+LENPDLWKWLT QEQPPEAV +NPVF+ + EKVM NLNKHA+PETR   GQ
Sbjct: 121 VKSLIHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 221
            WVRGWDDFKRGRD PI+GNQ
Sbjct: 181 PWVRGWDDFKRGRDAPISGNQ 188

[Close]
BLAST of Cp4.1LG01g16830 vs. TAIR 10
Match: AT5G51040.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631). )

HSP 1 Score: 215.7 bits (548), Expect = 3.7e-56
Identity = 119/210 (56.67%), Postives = 149/210 (70.95%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MAT R+A++  H++  ++ ++ V RS   +++P A     N    +  RN    G+  RF
Sbjct: 1   MAT-RKALINVHRI--IRSTAVVGRS---SIIPAA----ANRSYPIIFRNGVDLGA--RF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
            C +T     F DIDLSNEE+KRR  NRLLYRSKQRGFLELDLVLG WVE+++NS+D +G
Sbjct: 61  FCENTASAQNF-DIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVNSMDENG 120

Query: 140 IRALIKVLD---------LENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHAS 199
           +++LI VL+         LENPDLWKWLT QEQPPEAV +NPVF+ + EKVM NLNKHA+
Sbjct: 121 VKSLIHVLNLVESEATKLLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAA 180

Query: 200 PETRTPPGQQWVRGWDDFKRGRDGPITGNQ 221
           PETR   GQ WVRGWDDFKRGRD PI+GNQ
Sbjct: 181 PETRAAAGQPWVRGWDDFKRGRDAPISGNQ 197

[Close]
BLAST of Cp4.1LG01g16830 vs. TAIR 10
Match: AT5G51040.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631); Has 368 Blast hits to 368 proteins in 141 species: Archae - 0; Bacteria - 216; Metazoa - 8; Fungi - 13; Plants - 40; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). )

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-54
Identity = 115/201 (57.21%), Postives = 145/201 (72.14%), Query Frame = 0 

Query: 20  MATFRRAVLKAHQVLYLKPSSTVFRSKSMTLLPTAYILLENLQGRLPNRNQNQHGSFFRF 79
           MAT R+A++  H++  ++ ++ V RS   +++P A     N    +  RN    G+  RF
Sbjct: 1   MAT-RKALINVHRI--IRSTAVVGRS---SIIPAA----ANRSYPIIFRNGVDLGA--RF 60

Query: 80  RCSSTTVNPFFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 139
            C +T     F DIDLSNEE+KRR  N    RSKQRGFLELDLVLG WVE+++NS+D +G
Sbjct: 61  FCENTASAQNF-DIDLSNEENKRRTIN----RSKQRGFLELDLVLGNWVEENVNSMDENG 120

Query: 140 IRALIKVLDLENPDLWKWLTGQEQPPEAVKTNPVFTDVQEKVMNNLNKHASPETRTPPGQ 199
           +++LI VL+LENPDLWKWLT QEQPPEAV +NPVF+ + EKVM NLNKHA+PETR   GQ
Sbjct: 121 VKSLIHVLNLENPDLWKWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQ 180

Query: 200 QWVRGWDDFKRGRDGPITGNQ 221
            WVRGWDDFKRGRD PI+GNQ
Sbjct: 181 PWVRGWDDFKRGRDAPISGNQ 184

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16830 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FI442.5e-5759.20Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana... [more]
P0CR331.5e-0629.41Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoform... [more]
P0CR321.5e-0629.41Succinate dehydrogenase assembly factor 2, mitochondrial OS=Cryptococcus neoform... [more]
Q104402.0e-0629.55Succinate dehydrogenase assembly factor 2, mitochondrial OS=Schizosaccharomyces ... [more]
B6JZ702.6e-0628.92Succinate dehydrogenase assembly factor 2, mitochondrial OS=Schizosaccharomyces ... [more]
BLAST of Cp4.1LG01g16830 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023530673.12.92e-147100.00succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita pepo subsp. ... [more]
XP_022930034.13.15e-14297.01succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita moschata][more]
KAG7032455.11.28e-14196.52Succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita argyrosperma... [more]
XP_022994486.17.11e-13994.03succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita maxima][more]
KAG6601703.11.74e-13295.92Succinate dehydrogenase assembly factor 2, mitochondrial, partial [Cucurbita arg... [more]
BLAST of Cp4.1LG01g16830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EQG71.52e-14297.01succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita moschata O... [more]
A0A6J1JZA03.44e-13994.03succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita maxima OX=... [more]
A0A0A0LKF92.33e-11580.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072460 PE=4 SV=1[more]
A0A5D3C9Y91.62e-11480.60Succinate dehydrogenase assembly factor 2 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3B4131.62e-11480.60succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucumis melo OX=3656... [more]
BLAST of Cp4.1LG01g16830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G51040.11.8e-5859.20unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 ... [more]
AT5G51040.33.7e-5656.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G51040.21.6e-5457.21unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005631Flavinator of succinate dehydrogenasePFAMPF03937Sdh5coord: 106..175
e-value: 1.3E-21
score: 76.3
IPR036714Flavinator of succinate dehydrogenase superfamilyGENE3D1.10.150.250Flavinator of succinate dehydrogenasecoord: 91..187
e-value: 2.1E-22
score: 80.5
IPR036714Flavinator of succinate dehydrogenase superfamilySUPERFAMILY109910YgfY-likecoord: 106..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..207
NoneNo IPR availablePANTHERPTHR12469:SF5FLAVINATOR OF SUCCINATE DEHYDROGENASEcoord: 78..220
NoneNo IPR availablePANTHERPTHR12469PROTEIN EMI5 HOMOLOG, MITOCHONDRIALcoord: 78..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16830.1Cp4.1LG01g16830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006121 mitochondrial electron transport, succinate to ubiquinone
biological_process GO:0034553 mitochondrial respiratory chain complex II assembly
biological_process GO:0018293 protein-FAD linkage
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0005739 mitochondrion