Cp4.1LG01g16750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g16750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Cytochrome c
Location	Cp4.1LG01: 10568345 .. 10571688 (+)
RNA-Seq Expression	Cp4.1LG01g16750
Synteny	Cp4.1LG01g16750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCTTTGACGAAGCCCCCCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCACAAGCAAGGTCCTTCTTTCTCTTACTCCATTAGGCTCTTCTTATTCATATGTAAGAATTTCTTTGCGATTGGAGATCATTTGGTCTCTGTTGGTAATATGAACGTATCCAACCGTCTTCGGGGATCGTGACGCTGATTTGAGCTAGCTTCAACCGATCTGATTGTTCTCTCTCTCTTTCTCTCCCCCCTCCCCAGCGCACTAGGTTTATAATAGTTAGTATCGGCCTTGATAAACACTTTTCGTGGAATCTCACTTGTCCTTGTCCGAGAAGGAAACCCCGAAGGCATATATATTTTGGTTATTTGATTTGATGAAACGAATTTTAACATTTAGAAACGTATACTATTATAGAAGCTATTACTAATATATCATATTTATATCTTTTTAAATTCTGGTTTTTTAGAAATTGTTATCATCTATTAACTTGGTATGATAAGGTGGTATGTTTTTGTTTGATGTGATAGACATTGTTCAATATAAATTCTGATCGAGGTTAACGATTTAATCTACATTTATCTGTGTCCATTTTTTGTATATTTTCTATTGTGGTTCTAGCTGCTATTCTTGTTATCTTATTTGTTATGATGATCAAGTTTTAACATCTCAACCTGGATGAAAATGTTGGGGTCTTAATTTAACAGAGATAAATGACCATTGAAGTATCGATTAAATGTCGGATGTAAATTTCTGGCTAAGTTACAAACAATGAATTCTAAACAAAAAAACATCGTGTAAATCAACATTTTTTAACTTTTAAAACAAGTTAAAATGACTATTTGACATTTTTTTTCCTCTTTTCTCTTTTTTTATTATTATAAATTTTTATGTTTCATGTTTTTTTTTTTAAATTGTATAATGGAAATGATGAATCACCCCTTTTGTTGATGTCAAATCCATGGATGTGGAAATATCGATGGAAATGTTGAGTCGATGGAAATTTAATTTACTGATAATGATTATATTTGACACTTTTAATTGGAGTAGAATTTGATCTCACCCCCCCGCTGGGTCATGGGGGAAAATCAGCTCTTCTTTGTTAGTATTTAAGTCGACACTAAAACTAGCAACGTCACTTGGATCTTGCAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGGTAGATACTCTCTATTTCTTAACACTTCTTAACGTATGGCATTTGATTTAGAGTTGGTTTATTTCCCTGAGTTTTCCAGATGTCTTACTTGCCGATTAAGTGAAAATAATTGTGAACACACACCTAAATAAGCGTTGCCATGTTCTGTACTTGCTATCGGTAGCCTTGTTCTTCATAATACTTGTCCAACTGAGCAACAACTGATGAAATATTTTGGGCTCTTCGATCAACATGTCCCACCTTTTACCATCTTCTCCCTGGAGCTTTGTTAAAGTACTTTTTTTAAACATTTCAAATAGCTTCAATTAAAAGTTATCCATGGAATCTTGCACCTTTTCTACTTTAATATAGTCAAAACAAAGCCTCCCCCCACTTGGAGTTTCAATCTTGATTTAAGCTAGAATCAAAATCACCCTTAAAATTTCTCTCTTATATCTGAATATGCTTCAGACAATCTAGCATGTTAATATTTTTTTTAGCACATTGAATTTCATGATTTTCTCCAATGGCGTCTTAAGTCTCCATTAATAGAAAACACACTGGTCTCAACATAACCTAATGGTGAACCTGCACATTTGGGCATTAGTTGCGTTCCCCCCCTTGATCTTTCTTGTCCTCCTTTTGTGGCTGGGTTTGTCCCGAGTCCTGTTCTCTTATTGGAAATCCTTGTTCACCCATAAGTTTCAATGGCTTTGGTTGGTGGAAAATTTGGTCTCTTCTTTTGCCACTCTTATTTCATGGACATAATTACGAAGGGAGCAAAAATTTCTTCTCTGCTCTCAGTTTGGCATGAAAGATACTCAAAAGCTTCCAAAGAAAGTGAAATAATCTTGGTGGTAACTTTTGAGTGGAAGTATCAACTCTTGCTACATCATTTATAAAATGTGTCTTCAGAGCTGTATTTCACCAGGTTGGTCTTCTGTGTCGGAGTCCCTAGGCAATCTCCCTTTTTTTGGAAACTTGTAATGGCACTACTACTCAGATGTGGTTGGTTCTTGACCTCCTTCCCTTAAAGACACTAAAGTCCTTTCTCTTTGTTCCTTGAAGGTCATTCTTTCAAAAGTGAAAAGGTTTTGTGCATCAATGAATTGTGGGTTATTTTTGGCTTTTATGGCTCAAAGGGAAAGGAACACCACCGTTGTTTATAACAACGGAAAACCCATGTTTGGCTCATGGCTTTTAATTGAATCACCGCTGTATATTATCCATTTAATATGTTAAAAGTAAAATTATACATAAAACTTTGTTGAATATATCATAATATTTCTGTTTTGTAATAGATAAGTAATTTCTAAGTAAAATAATACCATTGTCAGGCCTTAATCTTTTTGAATAATTATTTTGAAATATAAATATTTAGTAACTTCTCAAATTGTTGGTATGAGTTTTTTAGCATATGAATCTTTGTTTAATAGTGTTCTAAACTCTTATGCTTGCTATGGTTTTGAGGAATGCGAAGTTGTCAATTTTGAGTGCTCTCAACTCCATGAATTTTGTAGACGTTCTAACAAAAATTTTGCTGTCTATTATCACACAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGCTTCCGCCTGTCTAGAATTTGTTCACACCCTTTTTACTCCCTTCATTAAATAAGAACATTGAGGTTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTTGTGAAAATCACAAGAGTTCCCTTTTTTTCATTAAATTCTTATTTCCCTTCGCTATTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACGTTGTTGGTTTGTGAACATAACTGCTAAACTTTTTGGCAAAGCCGGTTATGGCAATCTTTTTTTCATAATAAATAGCACGCTTGTAAGAACCTATCAATTCATTCATCAATGCTTTATTAGAAAGAATACGCTTATGGTGGATATAATTTTGGTATTTTTGCAA

mRNA sequence

ATGGCGAGCTTTGACGAAGCCCCCCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCACAAGCAAGGTCCTTCTTTCTCTTACTCCATTAGGCTCTTCTTATTCATATGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAATGATACGGTGCTTCCGCCTGTCTAGAATTTGTTCACACCCTTTTTACTCCCTTCATTAAATAAGAACATTGAGGTTAGATGGAAATTTGGAGGTCACGTACAAAGTAATTCTCTGTCAGACAGATTTGTCTTGTGAAAATCACAAGAGTTCCCTTTTTTTCATTAAATTCTTATTTCCCTTCGCTATTATACATCATTTGCAGAGTTCATCCATTTGTAGCTTACGTTGTTGGTTTGTGAACATAACTGCTAAACTTTTTGGCAAAGCCGGTTATGGCAATCTTTTTTTCATAATAAATAGCACGCTTGTAAGAACCTATCAATTCATTCATCAATGCTTTATTAGAAAGAATACGCTTATGGTGGATATAATTTTGGTATTTTTGCAA

Coding sequence (CDS)

ATGGCGAGCTTTGACGAAGCCCCCCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGAGCTGGTCACAAGCAAGGTCCTTCTTTCTCTTACTCCATTAGGCTCTTCTTATTCATATGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGTACAACTCCTGGATACTCTTACTCCGCTGCCAACAAGAATATGGCTGTGATATGGGAAGAGAAGACATTGTATGATTACTTGCTTAACCCCAAGAAGTATATACCCGGAACGAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAA

Protein sequence

MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKESTA

Homology

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BLAST of Cp4.1LG01g16750 vs. ExPASy Swiss-Prot
Match: P00051 (Cytochrome c OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 8.5e-58
Identity = 109/125 (87.20%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGR 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQG              PNLNGLFGR
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQG--------------PNLNGLFGR 60

Query: 62  QSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 121
           QSGTTPGYSYSAANKN AVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL
Sbjct: 61  QSGTTPGYSYSAANKNRAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 111

Query: 122 KESTA 127
           KE+TA
Sbjct: 121 KEATA 111

[Close]

BLAST of Cp4.1LG01g16750 vs. ExPASy Swiss-Prot
Match: P00052 (Cytochrome c OS=Vigna radiata var. radiata OX=3916 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.2e-57
Identity = 108/125 (86.40%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGR 61
           ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQG              PNLNGLFGR
Sbjct: 1   ASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQG--------------PNLNGLFGR 60

Query: 62  QSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 121
           QSGTT GYSYS ANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL
Sbjct: 61  QSGTTAGYSYSTANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 111

Query: 122 KESTA 127
           KESTA
Sbjct: 121 KESTA 111

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BLAST of Cp4.1LG01g16750 vs. ExPASy Swiss-Prot
Match: Q9T0G2 (Cytochrome c-2 OS=Arabidopsis thaliana OX=3702 GN=CYTC-2 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.7e-56
Identity = 106/126 (84.13%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQG              PNLNGLFG
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQG--------------PNLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKE TA
Sbjct: 121 LKEGTA 112

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BLAST of Cp4.1LG01g16750 vs. ExPASy Swiss-Prot
Match: P62772 (Cytochrome c OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.6e-56
Identity = 107/125 (85.60%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGR 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQG              PNLNGLFGR
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQG--------------PNLNGLFGR 60

Query: 62  QSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 121
           QSGTT GYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL
Sbjct: 61  QSGTTAGYSYSAANKNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 111

Query: 122 KESTA 127
           KE+TA
Sbjct: 121 KEATA 111

[Close]

BLAST of Cp4.1LG01g16750 vs. ExPASy Swiss-Prot
Match: P62773 (Cytochrome c OS=Brassica oleracea OX=3712 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.6e-56
Identity = 107/125 (85.60%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 2   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFGR 61
           ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQG              PNLNGLFGR
Sbjct: 1   ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQG--------------PNLNGLFGR 60

Query: 62  QSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 121
           QSGTT GYSYSAANKN AV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL
Sbjct: 61  QSGTTAGYSYSAANKNKAVEWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYL 111

Query: 122 KESTA 127
           KE+TA
Sbjct: 121 KEATA 111

[Close]

BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: XP_022930036.1 (cytochrome c [Cucurbita moschata] >XP_022994612.1 cytochrome c [Cucurbita maxima] >XP_023530772.1 cytochrome c [Cucurbita pepo subsp. pepo] >KAG6601704.1 hypothetical protein SDJN03_06937, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032456.1 hypothetical protein SDJN02_06504 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230 bits (587), Expect = 5.47e-76
Identity = 112/126 (88.89%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 126
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: XP_038893188.1 (cytochrome c [Benincasa hispida])

HSP 1 Score: 229 bits (583), Expect = 5.08e-75
Identity = 111/126 (88.10%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 26  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 85

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAY
Sbjct: 86  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAY 137

Query: 121 LKESTA 126
           LKESTA
Sbjct: 146 LKESTA 137

[Close]

BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: XP_008452381.1 (PREDICTED: cytochrome c [Cucumis melo] >KAA0058379.1 cytochrome c [Cucumis melo var. makuwa] >TYK26882.1 cytochrome c [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (579), Expect = 9.08e-75
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAY 112

Query: 121 LKESTA 126
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: XP_020218493.1 (cytochrome c [Cajanus cajan] >KYP64139.1 putative cytochrome c At4g10040 family [Cajanus cajan])

HSP 1 Score: 227 bits (579), Expect = 9.08e-75
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 126
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. NCBI nr
Match: XP_004146423.1 (cytochrome c [Cucumis sativus] >KGN50769.1 hypothetical protein Csa_005882 [Cucumis sativus])

HSP 1 Score: 227 bits (579), Expect = 9.70e-75
Identity = 110/125 (88.00%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 111

Query: 121 LKEST 125
           LKEST
Sbjct: 121 LKEST 111

[Close]

BLAST of Cp4.1LG01g16750 vs. ExPASy TrEMBL
Match: A0A6J1JWC5 (cytochrome c OS=Cucurbita maxima OX=3661 GN=LOC111490272 PE=3 SV=1)

HSP 1 Score: 230 bits (587), Expect = 2.65e-76
Identity = 112/126 (88.89%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 126
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. ExPASy TrEMBL
Match: A0A6J1EPS9 (cytochrome c OS=Cucurbita moschata OX=3662 GN=LOC111436470 PE=3 SV=1)

HSP 1 Score: 230 bits (587), Expect = 2.65e-76
Identity = 112/126 (88.89%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 126
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. ExPASy TrEMBL
Match: A0A5D3DTP9 (Cytochrome c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2133G00240 PE=3 SV=1)

HSP 1 Score: 227 bits (579), Expect = 4.40e-75
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAY 112

Query: 121 LKESTA 126
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. ExPASy TrEMBL
Match: A0A151TAR6 (Putative cytochrome c At4g10040 family OS=Cajanus cajan OX=3821 GN=KK1_018728 PE=3 SV=1)

HSP 1 Score: 227 bits (579), Expect = 4.40e-75
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 126
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. ExPASy TrEMBL
Match: A0A1S3BUU3 (cytochrome c OS=Cucumis melo OX=3656 GN=LOC103493436 PE=3 SV=1)

HSP 1 Score: 227 bits (579), Expect = 4.40e-75
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGNSK GEKIFKTKCAQCHTVDKGAGHKQGP              NLNGLFG
Sbjct: 1   MASFDEAPPGNSKTGEKIFKTKCAQCHTVDKGAGHKQGP--------------NLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQ+RADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAY 112

Query: 121 LKESTA 126
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. TAIR 10
Match: AT4G10040.1 (cytochrome c-2 )

HSP 1 Score: 219.2 bits (557), Expect = 1.9e-57
Identity = 106/126 (84.13%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQG              PNLNGLFG
Sbjct: 1   MASFDEAPPGNPKAGEKIFRTKCAQCHTVEKGAGHKQG--------------PNLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTPGYSYSAANKSMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKE TA
Sbjct: 121 LKEGTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. TAIR 10
Match: AT1G22840.1 (CYTOCHROME C-1 )

HSP 1 Score: 213.8 bits (543), Expect = 8.1e-56
Identity = 104/126 (82.54%), Postives = 107/126 (84.92%), Query Frame = 0


Query: 1   MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
           MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQG              PNLNGLFG
Sbjct: 1   MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQG--------------PNLNGLFG 60

Query: 61  RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 120
           RQSGTT GYSYSAANKN AV WEEK LYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY
Sbjct: 61  RQSGTTAGYSYSAANKNKAVEWEEKALYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAY 112

Query: 121 LKESTA 127
           LKESTA
Sbjct: 121 LKESTA 112

[Close]

BLAST of Cp4.1LG01g16750 vs. TAIR 10
Match: AT1G22840.2 (CYTOCHROME C-1 )

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-37
Identity = 74/98 (75.51%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 1  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPSFSYSIRLFLFICPNLNGLFG 60
          MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQG              PNLNGLFG
Sbjct: 1  MASFDEAPPGNAKAGEKIFRTKCAQCHTVEAGAGHKQG--------------PNLNGLFG 60

Query: 61 RQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKYI 99
          RQSGTT GYSYSAANKN AV WEEK LYDYLLNPKK +
Sbjct: 61 RQSGTTAGYSYSAANKNKAVEWEEKALYDYLLNPKKVL 84

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g16750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P00051	8.5e-58	87.20	Cytochrome c OS=Cucurbita maxima OX=3661 PE=1 SV=1	[more]
P00052	4.2e-57	86.40	Cytochrome c OS=Vigna radiata var. radiata OX=3916 PE=1 SV=1	[more]
Q9T0G2	2.7e-56	84.13	Cytochrome c-2 OS=Arabidopsis thaliana OX=3702 GN=CYTC-2 PE=1 SV=1	[more]
P62772	4.6e-56	85.60	Cytochrome c OS=Brassica napus OX=3708 PE=1 SV=1	[more]
P62773	4.6e-56	85.60	Cytochrome c OS=Brassica oleracea OX=3712 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g16750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930036.1	5.47e-76	88.89	cytochrome c [Cucurbita moschata] >XP_022994612.1 cytochrome c [Cucurbita maxima...	[more]
XP_038893188.1	5.08e-75	88.10	cytochrome c [Benincasa hispida]	[more]
XP_008452381.1	9.08e-75	87.30	PREDICTED: cytochrome c [Cucumis melo] >KAA0058379.1 cytochrome c [Cucumis melo ...	[more]
XP_020218493.1	9.08e-75	87.30	cytochrome c [Cajanus cajan] >KYP64139.1 putative cytochrome c At4g10040 family ...	[more]
XP_004146423.1	9.70e-75	88.00	cytochrome c [Cucumis sativus] >KGN50769.1 hypothetical protein Csa_005882 [Cucu...	[more]

BLAST of Cp4.1LG01g16750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWC5	2.65e-76	88.89	cytochrome c OS=Cucurbita maxima OX=3661 GN=LOC111490272 PE=3 SV=1	[more]
A0A6J1EPS9	2.65e-76	88.89	cytochrome c OS=Cucurbita moschata OX=3662 GN=LOC111436470 PE=3 SV=1	[more]
A0A5D3DTP9	4.40e-75	87.30	Cytochrome c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2133G00240 ...	[more]
A0A151TAR6	4.40e-75	87.30	Putative cytochrome c At4g10040 family OS=Cajanus cajan OX=3821 GN=KK1_018728 PE...	[more]
A0A1S3BUU3	4.40e-75	87.30	cytochrome c OS=Cucumis melo OX=3656 GN=LOC103493436 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g16750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10040.1	1.9e-57	84.13	cytochrome c-2	[more]
AT1G22840.1	8.1e-56	82.54	CYTOCHROME C-1	[more]
AT1G22840.2	1.3e-37	75.51	CYTOCHROME C-1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002327	Cytochrome c, class IA/ IB	PRINTS	PR00604	CYTCHRMECIAB	coord: 98..108 score: 81.56 coord: 115..123 score: 78.4 coord: 22..29 score: 83.53
IPR002327	Cytochrome c, class IA/ IB	PANTHER	PTHR11961	CYTOCHROME C	coord: 52..126
IPR002327	Cytochrome c, class IA/ IB	PANTHER	PTHR11961	CYTOCHROME C	coord: 1..41
IPR009056	Cytochrome c-like domain	PFAM	PF00034	Cytochrom_C	coord: 13..123 e-value: 2.3E-12 score: 47.8
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 10..125 score: 13.964895
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 1..126 e-value: 3.7E-42 score: 145.3
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 9..122
None	No IPR available	PANTHER	PTHR11961:SF41	BNAA07G10260D PROTEIN	coord: 52..126
None	No IPR available	PANTHER	PTHR11961:SF41	BNAA07G10260D PROTEIN	coord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g16750.1	Cp4.1LG01g16750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010336	gibberellic acid homeostasis
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0070469	respirasome
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0046872	metal ion binding