Cp4.1LG01g16670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g16670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cp4.1LG01: 10362629 .. 10367304 (-)
RNA-Seq Expression	Cp4.1LG01g16670
Synteny	Cp4.1LG01g16670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCAGCGCTTCTTTAGCCTTCCTCGAATCTTCTCCCGTCTCGCAGGACCTTTACTTGAAATGGGGCACCATGTTTCTTATTCCACATATGCTTCCCAGCCCCCACTCTCCGACCTCGATCAAACCATGGCTTCAGTACAGTTTATTTCCTTACATTCCTGCTTTTATTTCATGGGACTTTGCAGGAACATTGATACTCTCATCAAGTTCCATGGGTTGCTCATAGTTCACGGCCTTGTCGGTAATCTTCTTTGTGATACTAAGTTAGTCGGTGTTTATGGCGCACTTGGGGATGTGGGTTCTGCTCGCATGGTGTTCGATCAAATGCGCGACCCAGACTTTTATGCGTGGAAGGTAATGATCAGGTGGTATTTCTTGAATGACATGTTTGCGAGTATTATTCCGTTCTATAATCGCATGCGAATGTCATTTAAGGAATGTGATAACATTATTTTTTCAATTATTTTGAAAGCGTGTAGCGAATTGCGTGAAATTGATGAAGGGAGGAAGGTCCATTGCCAGATTGTGAAGGTGGGGGGTCCGGATAGTTTTGTATTGACTGGTTTGATAGATATGTATGGTAAATGTGGGCAGATTGAGTGGTCAAGCGCTGTGTTTGAAGGAATTATCGATAAGAATGTGGTTTCTTGGACTACAATGATTGCGGGATATGTACAAAATGATTGTGCAGAAGAGGGTCTGGTTTTATTCAATCGGATGAGAGAATCATTGGTCGAAAGCAACCAATTTACTTTAGGGAGCATAATAACTGCTTGTACAAGATTAAGAGCTTTGCATCAGGGGAAATGGGTACATGGCTATGCCATTAAGAACGTTATTATTGAACTTAACTCTTTTTTGGCGACAGCTTTCTTGGACATGTATGTTAAATGTGGGCAAACAAGAGATGCTCACATGATATTTGACGAGCTACCTAGTATTGATCTCGTTTCATGGACTGCAATGATCGTTGGATATTCCCAAGCTGGCCAACCCAACGAGGCATTGAGGCTTTTCACTGATAAAATAAGGTCTGGTCTCTTACCTAATTCGGTCACTGCTGCAAGTATTCTTTCGGCATGTTCGGTGTCTGGTAATTTAAGTATCGGAATGTTAGTTCATGGACTTGGGATTAAACTTGGGCTGGAAGAGTGTGCAGTGAAGAATGCTCTTATTGACATGTATGCTAAATGCCATATGATTGACGATGCTTATGTTGTATTTCTTGGGGTTTTGGAAAAAGATGTGATTACTTGGAACTCAATGATATCTGGGTATGCTCAGAGTGGATCTGCATATGATGCCCTCCGTCTCTTTAATCAAATGAGATCGGACTCCCTTGCACCTGACGCAATAACTCTGGTGAGCGCCCTTTCAGCATCTGCCATCCTAGGTGCTGTACAGGTTGGTTCATCACTTCATGCTTACTCGATTAAAGAAGGCTTGTTTTCATCAAATCTTTACATTGGCACTGCACTTTTGAACTTGTATGCCAAATGTGGCGATGCTAAATCAGCACGTATGGTGTTCGACAGTATGGGAGATAAGAATATTATCACATGGAGTGCAATGATAGGTGGTTATGGAGTGCAGGGTGATGGAAGTGGATCCCTTGCCATTTTCTCCGACATGTTGAAGGAGGATTTAAAACCTAATGACGTAATTTTCACGACGGTATTATCTGCTTGTAGCTATTCCGGGATGGTTGAAGAGGGATGGAGATATTTCAAATCTATGAGTCAGGATTATAACTATGCGCCTTCCATGAAACACTATGCCTGTATGGTTGATCTTTTATCCCGATCTGGTAGACTGGAGGAAGCATTGGACTTTATTAAGAAAATGCCAGTTCAACCAGATATTAGTTTGTATGGAGCTTTTCTTCATGGATGTGGATTATACTCGAGGTTTGATCTTGGAGAAGTCATAGTCAGAGAAATGCTAGAGCTTCATCCAAATGAAGCTAGCCTTTATGTGCTTTTATCTAACCTGTATGCTTCAGATGGGAGATGGGGCCAAGTTAATGAGGTGAGAGATTTGATGCTACGGAGAGGATTGAAAAAGGTTCCAGGGTATAGCCTAGTAGAAACTAATGCAGGTGTGCCATTTCATTAGTTGAAGTGACTTGTGTGGTTCCTATCTTCATGTTTTCGTTGAGATAATCAAGATACTTTACCCAGTGAGGCTCTATTATATGGATCTATGACATTTTCTTAATGTCCTTGTCCTCTCCTTCACTGGAGTTTCGACAAGCCTTGTCGAATGGGGAAACGTTGGATACTATCAATCTTCTATCCTTGCGTGGAGAGTTTTGGTGGATGGAAAGAAGGATGTTCGTATCTAGAATCCTGTCCTTTTGAATGGTTCTCATGTAAATCCTTTTTTTCTTTTGAATGGCTCTCATGATTCTCATGCACTCTAATAAAATCACGGTGGTGACTTTGTGATGTTTTGTCGTGAATGGATGTCTTGGAGGGCAAGGAGTTGCATACTCAATAATTGTCTAGGATTGTAGCAGTGAAGTACACAATTATCTTCTCATTGACAAGATTCTTCTGCAAACACAACTTACACTTAAGCTGATTGTACACATCTTGCAAAGGACTTGAGTTAAAGGGAATTCGATTCATTACATCGAGCTAACTAGAGCGGCATCCACCAGGACTAATTGGCCAGACATACTACAGTGACATCGTCAATTCTAAAAGTGAGATTTCATTTTCGTAATTTTTCCTTTTCGAATATTAAGCATGTTCTGATGAGCTGAATAAAATTTCAAAACTCATACTAGGCTTGGCCGCTTGTCCAATTTTCAGTAGAAAGATCTTATTTCCTGCTGACTTCTGATTGGATATTTCTTGTTCTAATTGGTAGCGTTGAAGTGCCTGTTTGGGCATTATTTAAATATTTCTCTGAATTTTCAATATGGAGATTTTTTAAAATTCATCGTCATAGCTTAGAGATTTGAGCTTTTGGAATTAGTAGTAGTTTAACAAACGTGGCACCATCTGGTACATTCTTAGCATTCTATTGTATGATCGAGGATTGTTGGGAGGGAGTCCCACATTGACTAATTTAGGGAATGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCCTTTCAGAGAAGCCCAAAGCAAAGCTATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAAAGAGTCGTTATTCCTAACACTCTTCTGTCTCTAAATCACCAACTTATTATGTATCTACTAATCTGGGATTGCTGAATAAAGTTTTCCTTTGCCAATTTTGATGTGCTTGATCGGGCCAGTGACATTTTTACTTGTATATCTTCATTATGAGCTCATACAGGCCGACTTTTGACCTCTTTTAGACTTTGGCAACCTTTCTCTTTGCAGGCAAAGTGTTTTGCTTGATTCTTTTGCTTCTTGATCAGAACGTGAAATTGACTGCAATTTACTAAAAGCCTTGCACTGTGGAGGACTAATGTTTTACAACTCTGAGTGGCAGAGACTTCCTTTTACCTCTCTAACAGTATTGCAAACAGTGAAATAATGCTTACAAAACAACAACTTGAGTTCCTTTGTGGGATCAATTCATCAGGTACTATTGACTCTGTTAACATCTCTAACGGAAAAGACCAATCGGTTAAGGTTCTTAATAGATTTAGCTCAATTTATAAGGATCATTGAAACTTTTTGTAGTTTGAATTTGAAAATCGTATCCCAGTTCTTAAAATATATATACTTGTGCTTGATGCAAACATTAGTGACAACTTTTCTTCTATTGCTGACAGTGGTCGAGCCAAGGAAGATATGAAACCTATCCTTAAGTATTCATATAATTTCTTGCAGAGTGGACCAGAGAACTCCGAAAGATCATACGGAAGGCAACGGTGATGAGCAACCTTCAATCATTCAAGTATTTTACTATTTTTAAACTTGATTTGTATTGAAGTGCAAAATTCCTGTATGACCACTTTATGAACTATGATAATTTATTGATTGATGCTATGCCATCTCCTTTTCAGCTCAGAATACAAATGATTCAAGTGTAGGAAGCTGTCCATCATCTCAAGTTTCAAGCATTCTGTACACTAGGAATAAAGCTCAAGACGTGGCTCATTTGGCTCAGGAAACAGATCTCCACATTCTTCTGATTTAAGGTTAGCACTCTACCTAGATACCATGGAAGAGAAGATATACTTTCTGAACTTACACTTGGAGAACCATACTCCATCAATTGTAGTTATAAAACTACTACGAAAGCTGAAGAACAATGCCGTGTGGAGGTAGGAGGAGGCCTACAGGCCGTGAGCCGCCTATCCCGAAAGAAAATGGGATAATAGAAAATACGGGATTCTTCATTACACTTGGATTGAAGCTAACAACAATCATAATTCAGGACTTCTAGGTAAACCCTTTTAGAGGAAATTGAAAGGTTGTGTATGTTGGGAATCGCGAACCTACATAATGACAAAGCATAAACTCTCATAGTTTTATCTTTAGTTTTTCCAAAATACTTCGTACCAATGAAGATGTATTTCCTTACTTATAAACTTATGATCAACCCCTTAATTAGCCGATGTGGGACTTCTCTCCCAACAATCTTTAACCGTGTAAAGTACAAAGAAATTCACACTCTGTCTGGGTTTCTTTGCAGTAC

mRNA sequence

ATGTTGCAGCGCTTCTTTAGCCTTCCTCGAATCTTCTCCCGTCTCGCAGGACCTTTACTTGAAATGGGGCACCATGTTTCTTATTCCACATATGCTTCCCAGCCCCCACTCTCCGACCTCGATCAAACCATGGCTTCAGTACAGTTTATTTCCTTACATTCCTGCTTTTATTTCATGGGACTTTGCAGGAACATTGATACTCTCATCAAGTTCCATGGGTTGCTCATAGTTCACGGCCTTGTCGGTAATCTTCTTTGTGATACTAAGTTAGTCGGTGTTTATGGCGCACTTGGGGATGTGGGTTCTGCTCGCATGGTGTTCGATCAAATGCGCGACCCAGACTTTTATGCGTGGAAGGTAATGATCAGGTGGTATTTCTTGAATGACATGTTTGCGAGTATTATTCCGTTCTATAATCGCATGCGAATGTCATTTAAGGAATGTGATAACATTATTTTTTCAATTATTTTGAAAGCGTGTAGCGAATTGCGTGAAATTGATGAAGGGAGGAAGGTCCATTGCCAGATTGTGAAGGTGGGGGGTCCGGATAGTTTTGTATTGACTGGTTTGATAGATATGTATGGTAAATGTGGGCAGATTGAGTGGTCAAGCGCTGTGTTTGAAGGAATTATCGATAAGAATGTGGTTTCTTGGACTACAATGATTGCGGGATATGTACAAAATGATTGTGCAGAAGAGGGTCTGGTTTTATTCAATCGGATGAGAGAATCATTGGTCGAAAGCAACCAATTTACTTTAGGGAGCATAATAACTGCTTGTACAAGATTAAGAGCTTTGCATCAGGGGAAATGGGTACATGGCTATGCCATTAAGAACGTTATTATTGAACTTAACTCTTTTTTGGCGACAGCTTTCTTGGACATGTATGTTAAATGTGGGCAAACAAGAGATGCTCACATGATATTTGACGAGCTACCTAGTATTGATCTCGTTTCATGGACTGCAATGATCGTTGGATATTCCCAAGCTGGCCAACCCAACGAGGCATTGAGGCTTTTCACTGATAAAATAAGGTCTGGTCTCTTACCTAATTCGGTCACTGCTGCAAGTATTCTTTCGGCATGTTCGGTGTCTGGTAATTTAAGTATCGGAATGTTAGTTCATGGACTTGGGATTAAACTTGGGCTGGAAGAGTGTGCAGTGAAGAATGCTCTTATTGACATGTATGCTAAATGCCATATGATTGACGATGCTTATGTTGTATTTCTTGGGGTTTTGGAAAAAGATGTGATTACTTGGAACTCAATGATATCTGGGTATGCTCAGAGTGGATCTGCATATGATGCCCTCCGTCTCTTTAATCAAATGAGATCGGACTCCCTTGCACCTGACGCAATAACTCTGGTGAGCGCCCTTTCAGCATCTGCCATCCTAGAGACTTCCTTTTACCTCTCTAACAGTATTGCAAACAGTGAAATAATGCTTACAAAACAACAACTTGAGTTCCTTTGTGGGATCAATTCATCAGCTCAGAATACAAATGATTCAAGTGTAGGAAGCTGTCCATCATCTCAAGTTTCAAGCATTCTGTACACTAGGAATAAAGCTCAAGACGTGGCTCATTTGGCTCAGGAAACAGATCTCCACATTCTTCTGATTTAAGGTTAGCACTCTACCTAGATACCATGGAAGAGAAGATATACTTTCTGAACTTACACTTGGAGAACCATACTCCATCAATTGTAGTTATAAAACTACTACGAAAGCTGAAGAACAATGCCGTGTGGAGGTAGGAGGAGGCCTACAGGCCGTGAGCCGCCTATCCCGAAAGAAAATGGGATAATAGAAAATACGGGATTCTTCATTACACTTGGATTGAAGCTAACAACAATCATAATTCAGGACTTCTAGGTAAACCCTTTTAGAGGAAATTGAAAGGTTGTGTATGTTGGGAATCGCGAACCTACATAATGACAAAGCATAAACTCTCATAGTTTTATCTTTAGTTTTTCCAAAATACTTCGTACCAATGAAGATGTATTTCCTTACTTATAAACTTATGATCAACCCCTTAATTAGCCGATGTGGGACTTCTCTCCCAACAATCTTTAACCGTGTAAAGTACAAAGAAATTCACACTCTGTCTGGGTTTCTTTGCAGTAC

Coding sequence (CDS)

ATGTTGCAGCGCTTCTTTAGCCTTCCTCGAATCTTCTCCCGTCTCGCAGGACCTTTACTTGAAATGGGGCACCATGTTTCTTATTCCACATATGCTTCCCAGCCCCCACTCTCCGACCTCGATCAAACCATGGCTTCAGTACAGTTTATTTCCTTACATTCCTGCTTTTATTTCATGGGACTTTGCAGGAACATTGATACTCTCATCAAGTTCCATGGGTTGCTCATAGTTCACGGCCTTGTCGGTAATCTTCTTTGTGATACTAAGTTAGTCGGTGTTTATGGCGCACTTGGGGATGTGGGTTCTGCTCGCATGGTGTTCGATCAAATGCGCGACCCAGACTTTTATGCGTGGAAGGTAATGATCAGGTGGTATTTCTTGAATGACATGTTTGCGAGTATTATTCCGTTCTATAATCGCATGCGAATGTCATTTAAGGAATGTGATAACATTATTTTTTCAATTATTTTGAAAGCGTGTAGCGAATTGCGTGAAATTGATGAAGGGAGGAAGGTCCATTGCCAGATTGTGAAGGTGGGGGGTCCGGATAGTTTTGTATTGACTGGTTTGATAGATATGTATGGTAAATGTGGGCAGATTGAGTGGTCAAGCGCTGTGTTTGAAGGAATTATCGATAAGAATGTGGTTTCTTGGACTACAATGATTGCGGGATATGTACAAAATGATTGTGCAGAAGAGGGTCTGGTTTTATTCAATCGGATGAGAGAATCATTGGTCGAAAGCAACCAATTTACTTTAGGGAGCATAATAACTGCTTGTACAAGATTAAGAGCTTTGCATCAGGGGAAATGGGTACATGGCTATGCCATTAAGAACGTTATTATTGAACTTAACTCTTTTTTGGCGACAGCTTTCTTGGACATGTATGTTAAATGTGGGCAAACAAGAGATGCTCACATGATATTTGACGAGCTACCTAGTATTGATCTCGTTTCATGGACTGCAATGATCGTTGGATATTCCCAAGCTGGCCAACCCAACGAGGCATTGAGGCTTTTCACTGATAAAATAAGGTCTGGTCTCTTACCTAATTCGGTCACTGCTGCAAGTATTCTTTCGGCATGTTCGGTGTCTGGTAATTTAAGTATCGGAATGTTAGTTCATGGACTTGGGATTAAACTTGGGCTGGAAGAGTGTGCAGTGAAGAATGCTCTTATTGACATGTATGCTAAATGCCATATGATTGACGATGCTTATGTTGTATTTCTTGGGGTTTTGGAAAAAGATGTGATTACTTGGAACTCAATGATATCTGGGTATGCTCAGAGTGGATCTGCATATGATGCCCTCCGTCTCTTTAATCAAATGAGATCGGACTCCCTTGCACCTGACGCAATAACTCTGGTGAGCGCCCTTTCAGCATCTGCCATCCTAGAGACTTCCTTTTACCTCTCTAACAGTATTGCAAACAGTGAAATAATGCTTACAAAACAACAACTTGAGTTCCTTTGTGGGATCAATTCATCAGCTCAGAATACAAATGATTCAAGTGTAGGAAGCTGTCCATCATCTCAAGTTTCAAGCATTCTGTACACTAGGAATAAAGCTCAAGACGTGGCTCATTTGGCTCAGGAAACAGATCTCCACATTCTTCTGATTTAA

Protein sequence

MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVGGPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCGQTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILSACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILETSFYLSNSIANSEIMLTKQQLEFLCGINSSAQNTNDSSVGSCPSSQVSSILYTRNKAQDVAHLAQETDLHILLI

Homology

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy Swiss-Prot
Match: Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.4e-117
Identity = 212/421 (50.36%), Postives = 289/421 (68.65%), Query Frame = 0


Query: 45  ASVQFISLHSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR 104
           +S+ + +   CF  +  C NID+L + HG+L  +GL+G++   TKLV +YG  G    AR
Sbjct: 37  SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96

Query: 105 MVFDQMRDPDFYAWKVMIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELR 164
           +VFDQ+ +PDFY WKVM+R Y LN     ++  Y+ +       D+I+FS  LKAC+EL+
Sbjct: 97  LVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ 156

Query: 165 EIDEGRKVHCQIVKVGGPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAG 224
           ++D G+K+HCQ+VKV   D+ VLTGL+DMY KCG+I+ +  VF  I  +NVV WT+MIAG
Sbjct: 157 DLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216

Query: 225 YVQNDCAEEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIEL 284
           YV+ND  EEGLVLFNRMRE+ V  N++T G++I ACT+L ALHQGKW HG  +K+  IEL
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG-IEL 276

Query: 285 NSFLATAFLDMYVKCGQTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKI 344
           +S L T+ LDMYVKCG   +A  +F+E   +DLV WTAMIVGY+  G  NEAL LF    
Sbjct: 277 SSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 336

Query: 345 RSGLLPNSVTAASILSACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDD 404
              + PN VT AS+LS C +  NL +G  VHGL IK+G+ +  V NAL+ MYAKC+   D
Sbjct: 337 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRD 396

Query: 405 AYVVFLGVLEKDVITWNSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAI 464
           A  VF    EKD++ WNS+ISG++Q+GS ++AL LF++M S+S+ P+ +T+ S  SA A 
Sbjct: 397 AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACAS 456

Query: 465 L 466
           L
Sbjct: 457 L 456

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.8e-64
Identity = 143/434 (32.95%), Postives = 242/434 (55.76%), Query Frame = 0


Query: 68  LIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFL 127
           L + H  L+V GL  +    TKL+    + GD+  AR VFD +  P  + W  +IR Y  
Sbjct: 37  LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96

Query: 128 NDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG-GPDSFV 187
           N+ F   +  Y+ M+++    D+  F  +LKACS L  +  GR VH Q+ ++G   D FV
Sbjct: 97  NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 188 LTGLIDMYGKCGQIEWSSAVFEG--IIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRES 247
             GLI +Y KC ++  +  VFEG  + ++ +VSWT +++ Y QN    E L +F++MR+ 
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216

Query: 248 LVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCGQTRD 307
            V+ +   L S++ A T L+ L QG+ +H   +K + +E+   L  +   MY KCGQ   
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEIEPDLLISLNTMYAKCGQVAT 276

Query: 308 AHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILSACSV 367
           A ++FD++ S +L+ W AMI GY++ G   EA+ +F + I   + P++++  S +SAC+ 
Sbjct: 277 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 336

Query: 368 SGNLSIGMLVHG-LGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSM 427
            G+L     ++  +G     ++  + +ALIDM+AKC  ++ A +VF   L++DV+ W++M
Sbjct: 337 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 396

Query: 428 ISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSA---SAILETSFYLSNSIANSEI 487
           I GY   G A +A+ L+  M    + P+ +T +  L A   S ++   ++  N +A+ +I
Sbjct: 397 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 456

Query: 488 MLTKQQLEFLCGIN 495
               QQ  + C I+
Sbjct: 457 --NPQQQHYACVID 467

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy Swiss-Prot
Match: Q0WNP3 (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-63
Identity = 146/397 (36.78%), Postives = 221/397 (55.67%), Query Frame = 0


Query: 72  HGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFLNDMF 131
           HG ++  G VGNL+ ++ LV  Y   G++ SA   FD M + D  +W  +I         
Sbjct: 207 HGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHG 266

Query: 132 ASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVK-VGGPDSFVLTGL 191
              I  +  M   +   +      ILKACSE + +  GR+VH  +VK +   D FV T L
Sbjct: 267 IKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSL 326

Query: 192 IDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRESLVESNQ 251
           +DMY KCG+I     VF+G+ ++N V+WT++IA + +    EE + LF  M+   + +N 
Sbjct: 327 MDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANN 386

Query: 252 FTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCGQTRDAHMIFD 311
            T+ SI+ AC  + AL  GK +H   IKN  IE N ++ +  + +Y KCG++RDA  +  
Sbjct: 387 LTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQ 446

Query: 312 ELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILSACSVSGNLSI 371
           +LPS D+VSWTAMI G S  G  +EAL    + I+ G+ PN  T +S L AC+ S +L I
Sbjct: 447 QLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLI 506

Query: 372 GMLVHGLGIK-LGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSMISGYAQ 431
           G  +H +  K   L    V +ALI MYAKC  + +A+ VF  + EK++++W +MI GYA+
Sbjct: 507 GRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYAR 566

Query: 432 SGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILE 467
           +G   +AL+L  +M ++    D     + LS    +E
Sbjct: 567 NGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.2e-62
Identity = 139/420 (33.10%), Postives = 227/420 (54.05%), Query Frame = 0


Query: 53  HSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRD 112
           H     +  C ++  L +   L+  +GL       TKLV ++   G V  A  VF+ +  
Sbjct: 38  HPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97

Query: 113 PDFYAWKVMIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKV 172
                +  M++ +         + F+ RMR    E     F+ +LK C +  E+  G+++
Sbjct: 98  KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157

Query: 173 HCQIVKVG-GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCA 232
           H  +VK G   D F +TGL +MY KC Q+  +  VF+ + ++++VSW T++AGY QN  A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217

Query: 233 EEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATA 292
              L +   M E  ++ +  T+ S++ A + LR +  GK +HGYA+++    L + ++TA
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN-ISTA 277

Query: 293 FLDMYVKCGQTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPN 352
            +DMY KCG    A  +FD +   ++VSW +MI  Y Q   P EA+ +F   +  G+ P 
Sbjct: 278 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 337

Query: 353 SVTAASILSACSVSGNLSIGMLVHGLGIKLGLE-ECAVKNALIDMYAKCHMIDDAYVVFL 412
            V+    L AC+  G+L  G  +H L ++LGL+   +V N+LI MY KC  +D A  +F 
Sbjct: 338 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 397

Query: 413 GVLEKDVITWNSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILETSFY 471
            +  + +++WN+MI G+AQ+G   DAL  F+QMRS ++ PD  T VS ++A A L  + +
Sbjct: 398 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.4e-62
Identity = 150/460 (32.61%), Postives = 232/460 (50.43%), Query Frame = 0


Query: 72  HGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMI----RWYFL 131
           H  +I  G    +    +L+  Y   G +   R VFD+M   + Y W  ++    +  FL
Sbjct: 43  HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102

Query: 132 ND---MFASIIP----FYNRMRMSFKE---CDNII-----------------FSIILKAC 191
           ++   +F S+       +N M   F +   C+  +                 F+ +L AC
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162

Query: 192 SELREIDEGRKVHCQIVKVGG-PDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWT 251
           S L ++++G +VH  I K     D ++ + L+DMY KCG +  +  VF+ + D+NVVSW 
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222

Query: 252 TMIAGYVQNDCAEEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKN 311
           ++I  + QN  A E L +F  M ES VE ++ TL S+I+AC  L A+  G+ VHG  +KN
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282

Query: 312 VIIELNSFLATAFLDMYVKCGQTRDAHMIFDELP-------------------------- 371
             +  +  L+ AF+DMY KC + ++A  IFD +P                          
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342

Query: 372 -----SIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILSACSVSGNL 431
                  ++VSW A+I GY+Q G+  EAL LF    R  + P   + A+IL AC+    L
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402

Query: 432 SIGM------LVHGLGIKLGLE-ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 462
            +GM      L HG   + G E +  V N+LIDMY KC  +++ Y+VF  ++E+D ++WN
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462

[Close]

BLAST of Cp4.1LG01g16670 vs. NCBI nr
Match: XP_023540052.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540134.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540211.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023540287.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 932 bits (2410), Expect = 0.0
Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465

[Close]

BLAST of Cp4.1LG01g16670 vs. NCBI nr
Match: XP_022957571.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957572.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957573.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957574.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957575.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957577.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957578.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata])

HSP 1 Score: 921 bits (2381), Expect = 0.0
Identity = 460/465 (98.92%), Postives = 462/465 (99.35%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPRIFSRLAGPLLEMGHH+SYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMYGKCGQIE SSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI ELNSFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465

[Close]

BLAST of Cp4.1LG01g16670 vs. NCBI nr
Match: KAG7032406.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 920 bits (2379), Expect = 0.0
Identity = 459/465 (98.71%), Postives = 463/465 (99.57%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPRIFSRLAGPLLEMGHH+SYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMYGKCGQIE SSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MIFDELPSIDLVSWTAMIVGYSQAGQPN+ALRLFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNDALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGYAQSGSAYDALRLFNQM+SDSLAPDAITLVSALSASAIL
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMKSDSLAPDAITLVSALSASAIL 465

[Close]

BLAST of Cp4.1LG01g16670 vs. NCBI nr
Match: KAG6601646.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 918 bits (2373), Expect = 0.0
Identity = 458/465 (98.49%), Postives = 462/465 (99.35%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPRIFSRLAGPLLEMGHH+ YSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHIFYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMYGKCGQIE SSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MIFDELPSIDLVSWTAMIVGYSQAGQPN+ALRLFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNDALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGYAQSGSAYDALRLFNQM+SDSLAPDAITLVSALSASAIL
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMKSDSLAPDAITLVSALSASAIL 465

[Close]

BLAST of Cp4.1LG01g16670 vs. NCBI nr
Match: XP_022997487.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997497.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997504.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997514.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997519.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997526.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997533.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima])

HSP 1 Score: 898 bits (2321), Expect = 0.0
Identity = 449/465 (96.56%), Postives = 456/465 (98.06%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPRIFSRLAGPLLEMGHH+SYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSF+ECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMYGKCGQIE SSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI EL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI-ELSSFLATAFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MIFDELP+IDLVSWTAMIVGY+QAGQPNEAL LFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNLSIGM VHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGY Q+GSAYDALRLFNQMRSDSLAPDAITLVS LSASAIL
Sbjct: 421 NSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAIL 464

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy TrEMBL
Match: A0A6J1GZK8 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458927 PE=4 SV=1)

HSP 1 Score: 921 bits (2381), Expect = 0.0
Identity = 460/465 (98.92%), Postives = 462/465 (99.35%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPRIFSRLAGPLLEMGHH+SYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMYGKCGQIE SSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI ELNSFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy TrEMBL
Match: A0A6J1KBI2 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492392 PE=4 SV=1)

HSP 1 Score: 898 bits (2321), Expect = 0.0
Identity = 449/465 (96.56%), Postives = 456/465 (98.06%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPRIFSRLAGPLLEMGHH+SYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLNDMFA+IIPFYNRMRMSF+ECDNIIFSIILKAC ELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFVLTGLIDMYGKCGQIE SSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI EL+SFLATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVI-ELSSFLATAFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MIFDELP+IDLVSWTAMIVGY+QAGQPNEAL LFTDKIRSGLLPNSVTAASILS
Sbjct: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNLSIGM VHGLGIKLGL ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGY Q+GSAYDALRLFNQMRSDSLAPDAITLVS LSASAIL
Sbjct: 421 NSMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAIL 464

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy TrEMBL
Match: A0A1S4E1F1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496696 PE=4 SV=1)

HSP 1 Score: 814 bits (2102), Expect = 1.26e-290
Identity = 404/465 (86.88%), Postives = 429/465 (92.26%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPR FS L G LL+MGH +SYSTYAS PPLSDL QTM SVQFISLHSC Y MG
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SARMVFDQM DPDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLND+F  +IPFYN MRMSF+ECDNIIFSIILKACSELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFV+TGLIDMYGKC Q+E SSAVFE I+DKNVVSWT+MIAGYVQN+CAEEGLVLFNR
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MR++LVESN FTLGSII ACT+LRALHQGKWVHGYAIKN I+E +SFLAT FLDMYVKCG
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKN-IVEFSSFLATTFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MIFDELP+IDLVSWTAMIVGY+QA QPN+ LRLF D+IRS LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNL++GM VHGLGIKLGLEECAVKNALIDMYAKCH I DAYV+F GVLEKDVITW
Sbjct: 361 ACSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGYAQ+GSAYDALRLFNQMRS SLAPDAITLVS LSASA L
Sbjct: 421 NSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATL 464

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy TrEMBL
Match: A0A5D3DQT2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001190 PE=4 SV=1)

HSP 1 Score: 814 bits (2102), Expect = 3.85e-289
Identity = 404/465 (86.88%), Postives = 429/465 (92.26%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRFFSLPR FS L G LL+MGH +SYSTYAS PPLSDL QTM SVQFISLHSC Y MG
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SARMVFDQM DPDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLND+F  +IPFYN MRMSF+ECDNIIFSIILKACSELREIDEGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFV+TGLIDMYGKC Q+E SSAVFE I+DKNVVSWT+MIAGYVQN+CAEEGLVLFNR
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MR++LVESN FTLGSII ACT+LRALHQGKWVHGYAIKN I+E +SFLAT FLDMYVKCG
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKN-IVEFSSFLATTFLDMYVKCG 300

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MIFDELP+IDLVSWTAMIVGY+QA QPN+ LRLF D+IRS LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLS 360

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNL++GM VHGLGIKLGLEECAVKNALIDMYAKCH I DAYV+F GVLEKDVITW
Sbjct: 361 ACSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITW 420

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGYAQ+GSAYDALRLFNQMRS SLAPDAITLVS LSASA L
Sbjct: 421 NSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATL 464

[Close]

BLAST of Cp4.1LG01g16670 vs. ExPASy TrEMBL
Match: A0A0A0KLZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189930 PE=4 SV=1)

HSP 1 Score: 786 bits (2030), Expect = 2.69e-283
Identity = 393/465 (84.52%), Postives = 420/465 (90.32%), Query Frame = 0


Query: 1   MLQRFFSLPRIFSRLAGPLLEMGHHVSYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60
           MLQRF   PR F RLA PLL+MGH +SYSTYAS PPLSDL QTM SVQFISL  C Y MG
Sbjct: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72

Query: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120
           L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SARMVFDQM +PDFYAWKV
Sbjct: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132

Query: 121 MIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180
           MIRWYFLND+F  +IPFYNRMRMSF+ECDNIIFSIILKACSELREI EGRKVHCQIVKVG
Sbjct: 133 MIRWYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVG 192

Query: 181 GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240
           GPDSFV+TGLIDMYGKCGQ+E SSAVFE I+DKNVVSWT+MIAGYVQN+CAEEGLVLFNR
Sbjct: 193 GPDSFVMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 252

Query: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300
           MR++LVESN FTLGSII ACT+LRALHQGKWVHGYAIKN I EL+SFLAT FLDMYVKCG
Sbjct: 253 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKN-IAELSSFLATTFLDMYVKCG 312

Query: 301 QTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360
           QTRDA MI+DELP+IDLVSWTAMIVGY+QA QPN+ LRLF D+IRS LLPNSVTAAS+LS
Sbjct: 313 QTRDARMIYDELPTIDLVSWTAMIVGYTQARQPNDGLRLFADEIRSDLLPNSVTAASVLS 372

Query: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420
           ACSVSGNL++GM VHGLGIK+GLEEC VKNALIDMYAKCH I DAY +F GVLEKDVITW
Sbjct: 373 ACSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITW 432

Query: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAIL 465
           NSMISGYAQ+GSAYDALRLFNQMR   LAPD ITLVS LSA A L
Sbjct: 433 NSMISGYAQNGSAYDALRLFNQMRLYFLAPDVITLVSTLSACATL 473

[Close]

BLAST of Cp4.1LG01g16670 vs. TAIR 10
Match: AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-118
Identity = 212/421 (50.36%), Postives = 289/421 (68.65%), Query Frame = 0


Query: 45  ASVQFISLHSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR 104
           +S+ + +   CF  +  C NID+L + HG+L  +GL+G++   TKLV +YG  G    AR
Sbjct: 37  SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96

Query: 105 MVFDQMRDPDFYAWKVMIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELR 164
           +VFDQ+ +PDFY WKVM+R Y LN     ++  Y+ +       D+I+FS  LKAC+EL+
Sbjct: 97  LVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ 156

Query: 165 EIDEGRKVHCQIVKVGGPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAG 224
           ++D G+K+HCQ+VKV   D+ VLTGL+DMY KCG+I+ +  VF  I  +NVV WT+MIAG
Sbjct: 157 DLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216

Query: 225 YVQNDCAEEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIEL 284
           YV+ND  EEGLVLFNRMRE+ V  N++T G++I ACT+L ALHQGKW HG  +K+  IEL
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG-IEL 276

Query: 285 NSFLATAFLDMYVKCGQTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKI 344
           +S L T+ LDMYVKCG   +A  +F+E   +DLV WTAMIVGY+  G  NEAL LF    
Sbjct: 277 SSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 336

Query: 345 RSGLLPNSVTAASILSACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDD 404
              + PN VT AS+LS C +  NL +G  VHGL IK+G+ +  V NAL+ MYAKC+   D
Sbjct: 337 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRD 396

Query: 405 AYVVFLGVLEKDVITWNSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAI 464
           A  VF    EKD++ WNS+ISG++Q+GS ++AL LF++M S+S+ P+ +T+ S  SA A 
Sbjct: 397 AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACAS 456

Query: 465 L 466
           L
Sbjct: 457 L 456

[Close]

BLAST of Cp4.1LG01g16670 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 246.5 bits (628), Expect = 4.8e-65
Identity = 143/434 (32.95%), Postives = 242/434 (55.76%), Query Frame = 0


Query: 68  LIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFL 127
           L + H  L+V GL  +    TKL+    + GD+  AR VFD +  P  + W  +IR Y  
Sbjct: 37  LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96

Query: 128 NDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG-GPDSFV 187
           N+ F   +  Y+ M+++    D+  F  +LKACS L  +  GR VH Q+ ++G   D FV
Sbjct: 97  NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 188 LTGLIDMYGKCGQIEWSSAVFEG--IIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRES 247
             GLI +Y KC ++  +  VFEG  + ++ +VSWT +++ Y QN    E L +F++MR+ 
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216

Query: 248 LVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCGQTRD 307
            V+ +   L S++ A T L+ L QG+ +H   +K + +E+   L  +   MY KCGQ   
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK-MGLEIEPDLLISLNTMYAKCGQVAT 276

Query: 308 AHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILSACSV 367
           A ++FD++ S +L+ W AMI GY++ G   EA+ +F + I   + P++++  S +SAC+ 
Sbjct: 277 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 336

Query: 368 SGNLSIGMLVHG-LGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSM 427
            G+L     ++  +G     ++  + +ALIDM+AKC  ++ A +VF   L++DV+ W++M
Sbjct: 337 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 396

Query: 428 ISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSA---SAILETSFYLSNSIANSEI 487
           I GY   G A +A+ L+  M    + P+ +T +  L A   S ++   ++  N +A+ +I
Sbjct: 397 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 456

Query: 488 MLTKQQLEFLCGIN 495
               QQ  + C I+
Sbjct: 457 --NPQQQHYACVID 467

[Close]

BLAST of Cp4.1LG01g16670 vs. TAIR 10
Match: AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 245.7 bits (626), Expect = 8.3e-65
Identity = 146/397 (36.78%), Postives = 221/397 (55.67%), Query Frame = 0


Query: 72  HGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMIRWYFLNDMF 131
           HG ++  G VGNL+ ++ LV  Y   G++ SA   FD M + D  +W  +I         
Sbjct: 207 HGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHG 266

Query: 132 ASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVK-VGGPDSFVLTGL 191
              I  +  M   +   +      ILKACSE + +  GR+VH  +VK +   D FV T L
Sbjct: 267 IKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSL 326

Query: 192 IDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNRMRESLVESNQ 251
           +DMY KCG+I     VF+G+ ++N V+WT++IA + +    EE + LF  M+   + +N 
Sbjct: 327 MDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANN 386

Query: 252 FTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCGQTRDAHMIFD 311
            T+ SI+ AC  + AL  GK +H   IKN  IE N ++ +  + +Y KCG++RDA  +  
Sbjct: 387 LTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQ 446

Query: 312 ELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILSACSVSGNLSI 371
           +LPS D+VSWTAMI G S  G  +EAL    + I+ G+ PN  T +S L AC+ S +L I
Sbjct: 447 QLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLI 506

Query: 372 GMLVHGLGIK-LGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWNSMISGYAQ 431
           G  +H +  K   L    V +ALI MYAKC  + +A+ VF  + EK++++W +MI GYA+
Sbjct: 507 GRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYAR 566

Query: 432 SGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILE 467
           +G   +AL+L  +M ++    D     + LS    +E
Sbjct: 567 NGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601

[Close]

BLAST of Cp4.1LG01g16670 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 241.5 bits (615), Expect = 1.6e-63
Identity = 139/420 (33.10%), Postives = 227/420 (54.05%), Query Frame = 0


Query: 53  HSCFYFMGLCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRD 112
           H     +  C ++  L +   L+  +GL       TKLV ++   G V  A  VF+ +  
Sbjct: 38  HPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97

Query: 113 PDFYAWKVMIRWYFLNDMFASIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKV 172
                +  M++ +         + F+ RMR    E     F+ +LK C +  E+  G+++
Sbjct: 98  KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157

Query: 173 HCQIVKVG-GPDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWTTMIAGYVQNDCA 232
           H  +VK G   D F +TGL +MY KC Q+  +  VF+ + ++++VSW T++AGY QN  A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217

Query: 233 EEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATA 292
              L +   M E  ++ +  T+ S++ A + LR +  GK +HGYA+++    L + ++TA
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN-ISTA 277

Query: 293 FLDMYVKCGQTRDAHMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPN 352
            +DMY KCG    A  +FD +   ++VSW +MI  Y Q   P EA+ +F   +  G+ P 
Sbjct: 278 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 337

Query: 353 SVTAASILSACSVSGNLSIGMLVHGLGIKLGLE-ECAVKNALIDMYAKCHMIDDAYVVFL 412
            V+    L AC+  G+L  G  +H L ++LGL+   +V N+LI MY KC  +D A  +F 
Sbjct: 338 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 397

Query: 413 GVLEKDVITWNSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILETSFY 471
            +  + +++WN+MI G+AQ+G   DAL  F+QMRS ++ PD  T VS ++A A L  + +
Sbjct: 398 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456

[Close]

BLAST of Cp4.1LG01g16670 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 240.0 bits (611), Expect = 4.5e-63
Identity = 150/460 (32.61%), Postives = 232/460 (50.43%), Query Frame = 0


Query: 72  HGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKVMI----RWYFL 131
           H  +I  G    +    +L+  Y   G +   R VFD+M   + Y W  ++    +  FL
Sbjct: 43  HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFL 102

Query: 132 ND---MFASIIP----FYNRMRMSFKE---CDNII-----------------FSIILKAC 191
           ++   +F S+       +N M   F +   C+  +                 F+ +L AC
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162

Query: 192 SELREIDEGRKVHCQIVKVGG-PDSFVLTGLIDMYGKCGQIEWSSAVFEGIIDKNVVSWT 251
           S L ++++G +VH  I K     D ++ + L+DMY KCG +  +  VF+ + D+NVVSW 
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWN 222

Query: 252 TMIAGYVQNDCAEEGLVLFNRMRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKN 311
           ++I  + QN  A E L +F  M ES VE ++ TL S+I+AC  L A+  G+ VHG  +KN
Sbjct: 223 SLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 282

Query: 312 VIIELNSFLATAFLDMYVKCGQTRDAHMIFDELP-------------------------- 371
             +  +  L+ AF+DMY KC + ++A  IFD +P                          
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLM 342

Query: 372 -----SIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILSACSVSGNL 431
                  ++VSW A+I GY+Q G+  EAL LF    R  + P   + A+IL AC+    L
Sbjct: 343 FTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAEL 402

Query: 432 SIGM------LVHGLGIKLGLE-ECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 462
            +GM      L HG   + G E +  V N+LIDMY KC  +++ Y+VF  ++E+D ++WN
Sbjct: 403 HLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWN 462

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g16670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ74	2.4e-117	50.36	Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop...	[more]
Q9LTV8	6.8e-64	32.95	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q0WNP3	1.2e-63	36.78	Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop...	[more]
Q3E6Q1	2.2e-62	33.10	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q9SIT7	6.4e-62	32.61	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]

BLAST of Cp4.1LG01g16670 vs. NCBI nr


Match Name	Identity	Description
XP_023540052.1	100.00	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ...	[more]
XP_022957571.1	98.92	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ...	[more]
KAG7032406.1	98.71	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6601646.1	98.49	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022997487.1	96.56	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ...	[more]

BLAST of Cp4.1LG01g16670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZK8	0.0	98.92	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit...	[more]
A0A6J1KBI2	0.0	96.56	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit...	[more]
A0A1S4E1F1	1.26e-290	86.88	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis ...	[more]
A0A5D3DQT2	3.85e-289	86.88	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KLZ1	2.69e-283	84.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189930 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g16670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03380.1	1.7e-118	50.36	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G12770.1	4.8e-65	32.95	mitochondrial editing factor 22	[more]
AT4G18520.1	8.3e-65	36.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	1.6e-63	33.10	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G13600.1	4.5e-63	32.61	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 385..470 e-value: 5.3E-19 score: 70.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 137..278 e-value: 7.7E-23 score: 83.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 279..378 e-value: 2.0E-17 score: 65.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 290..313 e-value: 0.33 score: 11.3 coord: 390..413 e-value: 0.58 score: 10.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 415..455 e-value: 1.0E-9 score: 38.5 coord: 316..362 e-value: 5.7E-8 score: 32.8 coord: 213..260 e-value: 8.8E-9 score: 35.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 318..351 e-value: 6.1E-5 score: 20.9 coord: 418..452 e-value: 1.3E-8 score: 32.5 coord: 216..244 e-value: 2.6E-5 score: 22.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 214..248 score: 9.624079
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 416..450 score: 12.912469
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 316..350 score: 11.695765
None	No IPR available	PANTHER	PTHR24015:SF1951	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 61..466
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 61..466

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g16670.1	Cp4.1LG01g16670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding