Cp4.1LG01g16180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g16180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	F-box protein At1g67340
Location	Cp4.1LG01: 9882985 .. 9884961 (-)
RNA-Seq Expression	Cp4.1LG01g16180
Synteny	Cp4.1LG01g16180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTACACATACAAAAAGCGAGAGAGGCGTGGATATCACCCCAACAACAATCCTCCATGAGAACTCGAAGAGGCCTCTGTTATCCTCGTCTTCAATCCCCCTTCTTTTCCGACAACCGTGTTCGAAAAAGAACACACGATGCCGCCGCCGCCGCCGCCGACCACCACTTCTGCCGTAAGAGGAACAAGCCCTCTCCCGGCATCAAAACACCCACTTCCGATTTGTTCGATTCCTTGCCGGACGACCTCGTCATTTCTATTCTCTCTAAACTCAGCTCCGCCGCTTCCTCTCCCTCCGAGTTCATCAANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAATTTTGGGTTCAGATGCAAAAGATTAAACAGTTTAGGACTTAATCCCGTTGTATTATCAAGAGCTTCACTGAAGATTTTTGCAATTAGCGGTCGGAACTGGACGGAATCGGCTCACCGGTTTCTGAAACAGTGCTCCGACGCCGGCAACGTCGAGGCCTGTTATACTCTCGGCATGGTTAGTTCTAATTTTGTTGTTTTTTTTTTTTTAAAAAAAATTTATTTATTCTAATCCTATTTTGAAAGTTATAAACATTCCCCTTTTTTTTTTTTTTTGTGTGTGTGTATTTTAAAACCAATTAGTAATTCGGGCATTGATTTATTTATTCTTATGTGACACAGATTCGTTTCTACTGTTTGCAAAATCGAGGAAGTGGGGCTTCTCTAATGGCCAAGGCGGCGATTTATTCCCACGCGCCGGCGCTTTACTCACTCGCCGTCATTCAGTTCAACGGCAGTGGTGGCTCCAAAAATGACAAGAATCTCCGTGCCGGAGTTGCTCTTTGCGCACGTGCCGCTTTCCTCGGCCACATCGATGCCCTTAGGGAACTTGGTCATTGTCTCCAAGACGGTTACGGTGTTCGTCAGAACATAACGGAGGGTCGTCGGTTTCTTGTTCAGGCTAACGCGCGTGAACTCGCCGCCGTGCTTTCGTCGGAGGCGGGGTCGTCCGTTACCGCATCGCGTACGTGTCTGACGTGGAATCCTCATCCTCACCACCGTCACGTGACGGGTTCGGCATGTCCGTTGTTAAGCGATTTTGGTTGTAATATTCCGGCGCCTGAGGCTCATCCAGCGAGTCAGTTTTTGGCGGAGTGGTTCGCGGCACGTGGGGGGTCGCCGGGGGATGGTTTGAGACTATGTTCGCACGTGGGGTGTGGACGACCAGAGACGAGACGGCATGAGTTTCGTCGATGTTCCGTTTGTGGTGCCGTTAACTACTGCTCACGTGCGTGTCAAGCGTTGGATTGGAAACTCCGCCACAAGATGGATTGCGTTCCTGTGGAACGTTGGCTTGATGATAACGGTGACGGTGGGGCCGATGGGGTTGATGATATGATGGACGAAAGTTAAAAAAAAACAAAAAAACAAAAAAACAAAATTTAAACTAAAACGAGAAATGACAGTGACGGTAGCCGTTTCTTAACGTCGGCGGCTTCTCGTAATTTCAGCCGGAGAGACGTGAAAGTAAAGGGAGAGAATAAAGAAAAGGAAAAGAACGACGAAAGGCCATGTTTTTATTTTTATTTTTTGGTTTAATTATCTTGTAACCATGGCCGCCGTATCGGCGCGGCGCTGCGCGGCGGGGCTTTTGTTGTCCTTCAGTGTACAGGGCGGCGGTGCCTTTTTTTTTTCTTTTTTTAATATTTTTGAAGGTTCGGGGCCTAATTTTGTACTATAGAGCAATCAGTAATTTACCACCGGTCCCTCTTATTTAGGTAATTATAATTTCAGATTAAAATATCCATTTTTTTAATTTCTTTTCCGTTTTTTTTTTCGAATTAAAATTATTCCTAGGCTCGTTTCCTACTGAACATTGAAACGGCACCGTTTCGATTTCAAATATGGATTGCTAAAACCGGATTAAATAATTACCTCTTATTTAGGTAATTATA

mRNA sequence

TTTTACACATACAAAAAGCGAGAGAGGCGTGGATATCACCCCAACAACAATCCTCCATGAGAACTCGAAGAGGCCTCTGTTATCCTCGTCTTCAATCCCCCTTCTTTTCCGACAACCGTGTTCGAAAAAGAACACACGATGCCGCCGCCGCCGCCGCCGACCACCACTTCTGCCGTAAGAGGAACAAGCCCTCTCCCGGCATCAAAACACCCACTTCCGATTTGTTCGATTCCTTGCCGGACGACCTCGTCATTTCTATTCTCTCTAAACTCAGCTCCGCCGCTTCCTCTCCCTCCGAATGCAAAAGATTAAACAGTTTAGGACTTAATCCCGTTGTATTATCAAGAGCTTCACTGAAGATTTTTGCAATTAGCGGTCGGAACTGGACGGAATCGGCTCACCGGTTTCTGAAACAGTGCTCCGACGCCGGCAACGTCGAGGCCTGTTATACTCTCGGCATGATTCGTTTCTACTGTTTGCAAAATCGAGGAAGTGGGGCTTCTCTAATGGCCAAGGCGGCGATTTATTCCCACGCGCCGGCGCTTTACTCACTCGCCGTCATTCAGTTCAACGGCAGTGGTGGCTCCAAAAATGACAAGAATCTCCGTGCCGGAGTTGCTCTTTGCGCACGTGCCGCTTTCCTCGGCCACATCGATGCCCTTAGGGAACTTGGTCATTGTCTCCAAGACGGTTACGGTGTTCGTCAGAACATAACGGAGGGTCGTCGGTTTCTTGTTCAGGCTAACGCGCGTGAACTCGCCGCCGTGCTTTCGTCGGAGGCGGGGTCGTCCGTTACCGCATCGCGTACGTGTCTGACGTGGAATCCTCATCCTCACCACCGTCACGTGACGGGTTCGGCATGTCCGTTGTTAAGCGATTTTGGTTGTAATATTCCGGCGCCTGAGGCTCATCCAGCGAGTCAGTTTTTGGCGGAGTGGTTCGCGGCACGTGGGGGGTCGCCGGGGGATGGTTTGAGACTATGTTCGCACGTGGGGTGTGGACGACCAGAGACGAGACGGCATGAGTTTCGTCGATGTTCCGTTTGTGGTGCCGTTAACTACTGCTCACGTGCGTGTCAAGCGTTGGATTGGAAACTCCGCCACAAGATGGATTGCGTTCCTGTGGAACGTTGGCTTGATGATAACGGTGACGGTGGGGCCGATGGGGTTGATGATATGATGGACGAAAGTTAAAAAAAAACAAAAAAACAAAAAAACAAAATTTAAACTAAAACGAGAAATGACAGTGACGGTAGCCGTTTCTTAACGTCGGCGGCTTCTCGTAATTTCAGCCGGAGAGACGTGAAAGTAAAGGGAGAGAATAAAGAAAAGGAAAAGAACGACGAAAGGCCATGTTTTTATTTTTATTTTTTGGTTTAATTATCTTGTAACCATGGCCGCCGTATCGGCGCGGCGCTGCGCGGCGGGGCTTTTGTTGTCCTTCAGTGTACAGGGCGGCGGTGCCTTTTTTTTTTCTTTTTTTAATATTTTTGAAGGTTCGGGGCCTAATTTTGTACTATAGAGCAATCAGTAATTTACCACCGGTCCCTCTTATTTAGGTAATTATAATTTCAGATTAAAATATCCATTTTTTTAATTTCTTTTCCGTTTTTTTTTTCGAATTAAAATTATTCCTAGGCTCGTTTCCTACTGAACATTGAAACGGCACCGTTTCGATTTCAAATATGGATTGCTAAAACCGGATTAAATAATTACCTCTTATTTAGGTAATTATA

Coding sequence (CDS)

ATGAGAACTCGAAGAGGCCTCTGTTATCCTCGTCTTCAATCCCCCTTCTTTTCCGACAACCGTGTTCGAAAAAGAACACACGATGCCGCCGCCGCCGCCGCCGACCACCACTTCTGCCGTAAGAGGAACAAGCCCTCTCCCGGCATCAAAACACCCACTTCCGATTTGTTCGATTCCTTGCCGGACGACCTCGTCATTTCTATTCTCTCTAAACTCAGCTCCGCCGCTTCCTCTCCCTCCGAATGCAAAAGATTAAACAGTTTAGGACTTAATCCCGTTGTATTATCAAGAGCTTCACTGAAGATTTTTGCAATTAGCGGTCGGAACTGGACGGAATCGGCTCACCGGTTTCTGAAACAGTGCTCCGACGCCGGCAACGTCGAGGCCTGTTATACTCTCGGCATGATTCGTTTCTACTGTTTGCAAAATCGAGGAAGTGGGGCTTCTCTAATGGCCAAGGCGGCGATTTATTCCCACGCGCCGGCGCTTTACTCACTCGCCGTCATTCAGTTCAACGGCAGTGGTGGCTCCAAAAATGACAAGAATCTCCGTGCCGGAGTTGCTCTTTGCGCACGTGCCGCTTTCCTCGGCCACATCGATGCCCTTAGGGAACTTGGTCATTGTCTCCAAGACGGTTACGGTGTTCGTCAGAACATAACGGAGGGTCGTCGGTTTCTTGTTCAGGCTAACGCGCGTGAACTCGCCGCCGTGCTTTCGTCGGAGGCGGGGTCGTCCGTTACCGCATCGCGTACGTGTCTGACGTGGAATCCTCATCCTCACCACCGTCACGTGACGGGTTCGGCATGTCCGTTGTTAAGCGATTTTGGTTGTAATATTCCGGCGCCTGAGGCTCATCCAGCGAGTCAGTTTTTGGCGGAGTGGTTCGCGGCACGTGGGGGGTCGCCGGGGGATGGTTTGAGACTATGTTCGCACGTGGGGTGTGGACGACCAGAGACGAGACGGCATGAGTTTCGTCGATGTTCCGTTTGTGGTGCCGTTAACTACTGCTCACGTGCGTGTCAAGCGTTGGATTGGAAACTCCGCCACAAGATGGATTGCGTTCCTGTGGAACGTTGGCTTGATGATAACGGTGACGGTGGGGCCGATGGGGTTGATGATATGATGGACGAAAGTTAA

Protein sequence

MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSLPDDLVISILSKLSSAASSPSECKRLNSLGLNPVVLSRASLKIFAISGRNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNGSGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARELAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCVPVERWLDDNGDGGADGVDDMMDES

Homology

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.8e-135
Identity = 239/329 (72.64%), Postives = 269/329 (81.76%), Query Frame = 0


Query: 51  TPTSDLFDSLPDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIF 110
           T  +DL DS+PDDLVISIL KL S +  P++       CKRL  L +NP+VLSR S K  
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 111 AISGRNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPAL 170
           A+   NW+E +HRFLK+C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 171 YSLAVIQFNGSGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGR 230
           YSLAVIQFNGSGGSKNDK+LRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN++EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 231 RFLVQANARELAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPE 290
           RFLVQANARELAAVLSS  G    ++   L+  P P   +     CPLLSDFGCN+PAPE
Sbjct: 218 RFLVQANARELAAVLSS--GIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPE 277

Query: 291 AHPASQFLAEWFAARGGS-PGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQA 350
            HPA++FLA+WFA RGG  PGDGLRLCSH GCGRPETR+HEFRRCSVCG VNYCSRACQA
Sbjct: 278 THPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQA 337

Query: 351 LDWKLRHKMDCVPVERWLDDNGDGGADGV 372
           LDWKLRHKMDC PV+RWL++ GDGG   V
Sbjct: 338 LDWKLRHKMDCAPVQRWLEE-GDGGEGNV 363

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.4e-103
Identity = 190/330 (57.58%), Postives = 238/330 (72.12%), Query Frame = 0


Query: 57  FDSLPDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRN 116
           F+ L DDL+ISIL KL+++ASSPS+       CKRLN LGL+P+VLS+A  +  A++   
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 117 WTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVI 176
           W++S+H+FLK C +AGN++A Y+LGMIRFYCLQN  SGASLMAKAAI SHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 177 QFNGSGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQA 236
           QFNGSGGSK DKNLRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++++EGRR L+QA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 237 NARELAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQ 296
           NARELA  L S                        +G     L+D    +P  E HP ++
Sbjct: 202 NARELACSLRSYLSLK-------------------SGDENETLTDLSV-VPVQEIHPVNR 261

Query: 297 FLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRH 356
           FL EWF++      +GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +H
Sbjct: 262 FLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKH 321

Query: 357 KMDCVPVERW------LDDNGDGGADGVDD 374
           K++C P++ W      + D+G+  A  +DD
Sbjct: 322 KVECTPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy Swiss-Prot
Match: Q9FPS9 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.5e-04
Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 0


Query: 326 RCSVCGAVNYCSRACQALDWKLRHKMDCVPVE 358
           RCS C +V YCS  CQ + W++ HK +CVPVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.3e-04
Identity = 21/53 (39.62%), Postives = 27/53 (50.94%), Query Frame = 0


Query: 305 GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCVPVE 358
           G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  C   +
Sbjct: 131 GAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTD 176

[Close]

BLAST of Cp4.1LG01g16180 vs. NCBI nr
Match: XP_023516587.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 764 bits (1972), Expect = 4.13e-278
Identity = 378/404 (93.56%), Postives = 378/404 (93.56%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL
Sbjct: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE--------------------------CKRLNSLGLNPVV 120
           PDDLVISILSKLSSAASSPSE                          CKRLNSLGLNPVV
Sbjct: 61  PDDLVISILSKLSSAASSPSEFIXFFFFFFFFFFFFFFFFFSNFGFRCKRLNSLGLNPVV 120

Query: 121 LSRASLKIFAISGRNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKA 180
           LSRASLKIFAISGRNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKA
Sbjct: 121 LSRASLKIFAISGRNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKA 180

Query: 181 AIYSHAPALYSLAVIQFNGSGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYG 240
           AIYSHAPALYSLAVIQFNGSGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYG
Sbjct: 181 AIYSHAPALYSLAVIQFNGSGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYG 240

Query: 241 VRQNITEGRRFLVQANARELAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSD 300
           VRQNITEGRRFLVQANARELAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSD
Sbjct: 241 VRQNITEGRRFLVQANARELAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSD 300

Query: 301 FGCNIPAPEAHPASQFLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVN 360
           FGCNIPAPEAHPASQFLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVN
Sbjct: 301 FGCNIPAPEAHPASQFLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVN 360

Query: 361 YCSRACQALDWKLRHKMDCVPVERWLDDNGDGGADGVDDMMDES 378
           YCSRACQALDWKLRHKMDCVPVERWLDDNGDGGADGVDDMMDES
Sbjct: 361 YCSRACQALDWKLRHKMDCVPVERWLDDNGDGGADGVDDMMDES 404

[Close]

BLAST of Cp4.1LG01g16180 vs. NCBI nr
Match: KAG6601598.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 758 bits (1958), Expect = 2.75e-276
Identity = 373/385 (96.88%), Postives = 374/385 (97.14%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTRRGLCYPRLQSPFFSDNRVRKRTH+AAAAAAD  FCRKRNKPSP IKTPTSDLFDSL
Sbjct: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHEAAAAAADRQFCRKRNKPSPDIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVISILSKLSSAASSPSE       CKRLNSLGLNPVVLSRASLKIFAIS RNWTES
Sbjct: 61  PDDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE
Sbjct: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300

Query: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 VPVERWLDDNGDGGADGVDDMMDES 378
           VPVERWLDDNGDGGADGVDDMMDES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 385

[Close]

BLAST of Cp4.1LG01g16180 vs. NCBI nr
Match: KAG7034708.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 756 bits (1952), Expect = 2.26e-275
Identity = 372/385 (96.62%), Postives = 373/385 (96.88%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTRRGLCYPRLQSPFFSDNRVRKRTH+A AAAAD  FCRKRNKPSP IKTPTSDLFDSL
Sbjct: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHEADAAAADRQFCRKRNKPSPDIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVISILSKLSSAASSPSE       CKRLNSLGLNPVVLSRASLKIFAIS RNWTES
Sbjct: 61  PDDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE
Sbjct: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300

Query: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 VPVERWLDDNGDGGADGVDDMMDES 378
           VPVERWLDDNGDGGADGVDDMMDES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 385

[Close]

BLAST of Cp4.1LG01g16180 vs. NCBI nr
Match: XP_022957417.1 (F-box protein At1g67340 [Cucurbita moschata])

HSP 1 Score: 743 bits (1919), Expect = 2.33e-270
Identity = 368/385 (95.58%), Postives = 368/385 (95.58%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTRRGLCYPRLQ PFFSDNRVRKRTHDAAA A D  FCRKRNKPSP IKTPTSDLFDSL
Sbjct: 1   MRTRRGLCYPRLQPPFFSDNRVRKRTHDAAADA-DRQFCRKRNKPSPDIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVISILSKLSSAASSPSE       CKRLNSLGLNPVVLSRASLKIFAIS RNWTES
Sbjct: 61  PDDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDKNL AGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKNLGAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSSEAGSSV ASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPE HPASQFLAE
Sbjct: 241 LAAVLSSEAGSSVAASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEVHPASQFLAE 300

Query: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 VPVERWLDDNGDGGADGVDDMMDES 378
           VPVERWLDDNGDGGADGVDDMMDES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 384

[Close]

BLAST of Cp4.1LG01g16180 vs. NCBI nr
Match: XP_022998094.1 (F-box protein At1g67340 [Cucurbita maxima])

HSP 1 Score: 720 bits (1858), Expect = 4.28e-261
Identity = 358/385 (92.99%), Postives = 363/385 (94.29%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTRRGLCYPRL + FFSDNRVRKRTHDA+A   D HFCRKRNK SP IKTPTSDLFDSL
Sbjct: 1   MRTRRGLCYPRLDAAFFSDNRVRKRTHDASA---DRHFCRKRNKLSPDIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVISILSKL +AASS SE       CKRLNSLGLNP+VLSRASLKIFAIS RNWTES
Sbjct: 61  PDDLVISILSKLGAAASSSSEFINILLTCKRLNSLGLNPIVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQC+DAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDK LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKILRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSSEAGSSVTASRT LTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE
Sbjct: 241 LAAVLSSEAGSSVTASRTFLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300

Query: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 VPVERWLDDNGDGGADGVDDMMDES 378
           VPVERWLDDNGDGGADGV DMMDES
Sbjct: 361 VPVERWLDDNGDGGADGVVDMMDES 382

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy TrEMBL
Match: A0A6J1GZ25 (F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1)

HSP 1 Score: 743 bits (1919), Expect = 1.13e-270
Identity = 368/385 (95.58%), Postives = 368/385 (95.58%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTRRGLCYPRLQ PFFSDNRVRKRTHDAAA A D  FCRKRNKPSP IKTPTSDLFDSL
Sbjct: 1   MRTRRGLCYPRLQPPFFSDNRVRKRTHDAAADA-DRQFCRKRNKPSPDIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVISILSKLSSAASSPSE       CKRLNSLGLNPVVLSRASLKIFAIS RNWTES
Sbjct: 61  PDDLVISILSKLSSAASSPSEFINILLTCKRLNSLGLNPVVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDKNL AGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKNLGAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSSEAGSSV ASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPE HPASQFLAE
Sbjct: 241 LAAVLSSEAGSSVAASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEVHPASQFLAE 300

Query: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 VPVERWLDDNGDGGADGVDDMMDES 378
           VPVERWLDDNGDGGADGVDDMMDES
Sbjct: 361 VPVERWLDDNGDGGADGVDDMMDES 384

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy TrEMBL
Match: A0A6J1KDE5 (F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 2.07e-261
Identity = 358/385 (92.99%), Postives = 363/385 (94.29%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTRRGLCYPRL + FFSDNRVRKRTHDA+A   D HFCRKRNK SP IKTPTSDLFDSL
Sbjct: 1   MRTRRGLCYPRLDAAFFSDNRVRKRTHDASA---DRHFCRKRNKLSPDIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVISILSKL +AASS SE       CKRLNSLGLNP+VLSRASLKIFAIS RNWTES
Sbjct: 61  PDDLVISILSKLGAAASSSSEFINILLTCKRLNSLGLNPIVLSRASLKIFAISARNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQC+DAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDK LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKILRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300
           LAAVLSSEAGSSVTASRT LTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE
Sbjct: 241 LAAVLSSEAGSSVTASRTFLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQFLAE 300

Query: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360
           WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
Sbjct: 301 WFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 360

Query: 361 VPVERWLDDNGDGGADGVDDMMDES 378
           VPVERWLDDNGDGGADGV DMMDES
Sbjct: 361 VPVERWLDDNGDGGADGVVDMMDES 382

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy TrEMBL
Match: A0A0A0KTC5 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 PE=4 SV=1)

HSP 1 Score: 647 bits (1668), Expect = 1.84e-232
Identity = 329/386 (85.23%), Postives = 340/386 (88.08%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTR GL YP LQ   F+    RKR H  AA   D  FCRKRNK S  IKTPTSDLFDSL
Sbjct: 1   MRTRTGLSYPPLQPTAFASGN-RKRKHHVAA---DRPFCRKRNKLSYHIKTPTSDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVI+ILS LSSAASSPS+       CKRLN+LGLNP+VLSRAS K FAI  +NWTES
Sbjct: 61  PDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDK+LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHP-HHRHVTGSACPLLSDFGCNIPAPEAHPASQFLA 300
           LAAVLSSEA SSV ASR+CLTWN  P HHRHVTGS CPLLSDFGCNIPAPEAHPASQFLA
Sbjct: 241 LAAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLA 300

Query: 301 EWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD 360
           EWF ARGGSPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+D
Sbjct: 301 EWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKID 360

Query: 361 CVPVERWLDDNGDGGADGVDDMMDES 378
           C PVERWLDDNGDG  D  DD+MDES
Sbjct: 361 CAPVERWLDDNGDGMDDVADDIMDES 382

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy TrEMBL
Match: A0A5A7SUQ1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002260 PE=4 SV=1)

HSP 1 Score: 646 bits (1667), Expect = 2.62e-232
Identity = 325/386 (84.20%), Postives = 338/386 (87.56%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTR GL YP LQ   FS    +++ H     AAD  FCRKRNK S  IKTP SDLFDSL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLH----VAADRPFCRKRNKHSSDIKTPISDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVI+ILS L SAASSPS+       CKRLN+LGLNP+VLSRAS K FAI  +NWTES
Sbjct: 61  PDDLVITILSNLCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDK+LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHP-HHRHVTGSACPLLSDFGCNIPAPEAHPASQFLA 300
           LAAVLSSEA SSV ASR+CLTWN HP HHRHVTGS CPLLSDFGCNIPAPEAHPASQFLA
Sbjct: 241 LAAVLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLA 300

Query: 301 EWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD 360
           EWF ARGGSPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD
Sbjct: 301 EWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD 360

Query: 361 CVPVERWLDDNGDGGADGVDDMMDES 378
           C PVERWLDDNGD   D  DD+M+ES
Sbjct: 361 CAPVERWLDDNGDVADDVADDIMEES 382

[Close]

BLAST of Cp4.1LG01g16180 vs. ExPASy TrEMBL
Match: A0A1S3BE37 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103488887 PE=4 SV=1)

HSP 1 Score: 645 bits (1663), Expect = 1.07e-231
Identity = 324/386 (83.94%), Postives = 337/386 (87.31%), Query Frame = 0


Query: 1   MRTRRGLCYPRLQSPFFSDNRVRKRTHDAAAAAADHHFCRKRNKPSPGIKTPTSDLFDSL 60
           MRTR GL YP LQ   FS    +++ H     AAD  FCRKRNK S  IKTP SDLFDSL
Sbjct: 1   MRTRTGLSYPPLQPTTFSSGNRKRKLH----VAADRPFCRKRNKHSSDIKTPISDLFDSL 60

Query: 61  PDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRNWTES 120
           PDDLVI+ILS   SAASSPS+       CKRLN+LGLNP+VLSRAS K FAI  +NWTES
Sbjct: 61  PDDLVITILSNFCSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRAKNWTES 120

Query: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVIQFNG 180
           AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNG
Sbjct: 121 AHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLAVIQFNG 180

Query: 181 SGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240
           SGGSKNDK+LRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE
Sbjct: 181 SGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQANARE 240

Query: 241 LAAVLSSEAGSSVTASRTCLTWNPHP-HHRHVTGSACPLLSDFGCNIPAPEAHPASQFLA 300
           LAAVLSSEA SSV ASR+CLTWN HP HHRHVTGS CPLLSDFGCNIPAPEAHPASQFLA
Sbjct: 241 LAAVLSSEAASSVAASRSCLTWNTHPPHHRHVTGSGCPLLSDFGCNIPAPEAHPASQFLA 300

Query: 301 EWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD 360
           EWF ARGGSPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD
Sbjct: 301 EWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMD 360

Query: 361 CVPVERWLDDNGDGGADGVDDMMDES 378
           C PVERWLDDNGD   D  DD+M+ES
Sbjct: 361 CAPVERWLDDNGDVADDVADDIMEES 382

[Close]

BLAST of Cp4.1LG01g16180 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 483.8 bits (1244), Expect = 1.3e-136
Identity = 239/329 (72.64%), Postives = 269/329 (81.76%), Query Frame = 0


Query: 51  TPTSDLFDSLPDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIF 110
           T  +DL DS+PDDLVISIL KL S +  P++       CKRL  L +NP+VLSR S K  
Sbjct: 38  TTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAI 97

Query: 111 AISGRNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPAL 170
           A+   NW+E +HRFLK+C DAG++EACYTLGMIRFYCLQNRG+GASLMAKAAI SHAPAL
Sbjct: 98  AVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPAL 157

Query: 171 YSLAVIQFNGSGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGR 230
           YSLAVIQFNGSGGSKNDK+LRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN++EGR
Sbjct: 158 YSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGR 217

Query: 231 RFLVQANARELAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPE 290
           RFLVQANARELAAVLSS  G    ++   L+  P P   +     CPLLSDFGCN+PAPE
Sbjct: 218 RFLVQANARELAAVLSS--GIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPE 277

Query: 291 AHPASQFLAEWFAARGGS-PGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQA 350
            HPA++FLA+WFA RGG  PGDGLRLCSH GCGRPETR+HEFRRCSVCG VNYCSRACQA
Sbjct: 278 THPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQA 337

Query: 351 LDWKLRHKMDCVPVERWLDDNGDGGADGV 372
           LDWKLRHKMDC PV+RWL++ GDGG   V
Sbjct: 338 LDWKLRHKMDCAPVQRWLEE-GDGGEGNV 363

[Close]

BLAST of Cp4.1LG01g16180 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 377.9 bits (969), Expect = 9.8e-105
Identity = 190/330 (57.58%), Postives = 238/330 (72.12%), Query Frame = 0


Query: 57  FDSLPDDLVISILSKLSSAASSPSE-------CKRLNSLGLNPVVLSRASLKIFAISGRN 116
           F+ L DDL+ISIL KL+++ASSPS+       CKRLN LGL+P+VLS+A  +  A++   
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 117 WTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAIYSHAPALYSLAVI 176
           W++S+H+FLK C +AGN++A Y+LGMIRFYCLQN  SGASLMAKAAI SHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 177 QFNGSGGSKNDKNLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQA 236
           QFNGSGGSK DKNLRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++++EGRR L+QA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 237 NARELAAVLSSEAGSSVTASRTCLTWNPHPHHRHVTGSACPLLSDFGCNIPAPEAHPASQ 296
           NARELA  L S                        +G     L+D    +P  E HP ++
Sbjct: 202 NARELACSLRSYLSLK-------------------SGDENETLTDLSV-VPVQEIHPVNR 261

Query: 297 FLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRH 356
           FL EWF++      +GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +H
Sbjct: 262 FLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKH 321

Query: 357 KMDCVPVERW------LDDNGDGGADGVDD 374
           K++C P++ W      + D+G+  A  +DD
Sbjct: 322 KVECTPLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of Cp4.1LG01g16180 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05
Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 0


Query: 326 RCSVCGAVNYCSRACQALDWKLRHKMDCVPVE 358
           RCS C +V YCS  CQ + W++ HK +CVPVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Cp4.1LG01g16180 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05
Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 0


Query: 326 RCSVCGAVNYCSRACQALDWKLRHKMDCVPVE 358
           RCS C +V YCS  CQ + W++ HK +CVPVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Cp4.1LG01g16180 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 45.8 bits (107), Expect = 8.8e-05
Identity = 19/40 (47.50%), Postives = 24/40 (60.00%), Query Frame = 0


Query: 314 CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 354
           CG+  T     ++CS C +V YCS ACQ  DWK  HK+ C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g16180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	1.8e-135	72.64	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.4e-103	57.58	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q9FPS9	1.5e-04	56.25	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]
Q2YDC9	3.3e-04	39.62	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g16180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516587.1	4.13e-278	93.56	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]
KAG6601598.1	2.75e-276	96.88	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7034708.1	2.26e-275	96.62	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957417.1	2.33e-270	95.58	F-box protein At1g67340 [Cucurbita moschata]	[more]
XP_022998094.1	4.28e-261	92.99	F-box protein At1g67340 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g16180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ25	1.13e-270	95.58	F-box protein At1g67340 OS=Cucurbita moschata OX=3662 GN=LOC111458825 PE=4 SV=1	[more]
A0A6J1KDE5	2.07e-261	92.99	F-box protein At1g67340 OS=Cucurbita maxima OX=3661 GN=LOC111492842 PE=4 SV=1	[more]
A0A0A0KTC5	1.84e-232	85.23	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 P...	[more]
A0A5A7SUQ1	2.62e-232	84.20	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002260 ...	[more]
A0A1S3BE37	1.07e-231	83.94	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103488887 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g16180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	1.3e-136	72.64	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	9.8e-105	57.58	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT1G17110.1	1.0e-05	56.25	ubiquitin-specific protease 15	[more]
AT1G17110.2	1.0e-05	56.25	ubiquitin-specific protease 15	[more]
AT2G24640.1	8.8e-05	47.50	ubiquitin-specific protease 19	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 314..353 e-value: 8.8E-8 score: 32.1
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 311..353 score: 10.859447
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 94..248 e-value: 5.9E-18 score: 67.6
None	No IPR available	GENE3D	6.10.140.2220		coord: 302..357 e-value: 1.3E-10 score: 42.7
None	No IPR available	PANTHER	PTHR46758:SF2	OSJNBA0044M19.1 PROTEIN	coord: 1..369
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 308..358
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 110..229
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g16180.1	Cp4.1LG01g16180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006414	translational elongation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003746	translation elongation factor activity