Cp4.1LG01g16130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g16130
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	REF/SRPP-like protein At1g67360
Location	Cp4.1LG01: 9872358 .. 9879355 (+)
RNA-Seq Expression	Cp4.1LG01g16130
Synteny	Cp4.1LG01g16130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGGTCTTAAGAGAGCAAAATAGAAATGGTTCACCCGCGAGAGCAATAGAATGAGAAAGAGAGAACCCTTAGTCTCATAATCTCATTTCAGTTGCGGTGATTCGGATGATAAGCGTCGGAGAAGAGAACTGAGGGTTGGAGGAATCGGAGAATTACAAGATTATTCGGCGCTGAGATGAGCTTAGTCAACACTCACAGAAGCTGCGCGCCAATTCGTTCACTCTCTCCTGCTTCATCCTCCATTTCCCGCTGCGCTCACACTTCCTCCTCTGGTAATGCTCTCTCCATCCTTCTCGCATCGTCTCTTCTCTTTTTGCTGTTGTTTTCCTTTGTCATCGTCCCATCTTTAGCCGTTACTGCAAGCAGTTGTGCTAGAATAGAATGCAAACATTTGCTGTCGTTTCTCAAATCGCCTAATTACAACTCATGAAGCACTTTATCGAACGGATGTGTAAAGTTGATTCAAATTGTATTTCATTCTTCGTATTTTTCGAGTCTTTCAGGAATACTGTAGTTTAGTGGCTAATTTGTAACTTAATTAGAGAAATCAAGATCATACTACATCGCGCTGAAGAACAAAAGAATAAAGGACTCGGGTTTGATAATAATGTGATGAACTGAGATTTCTGAGTTATTCAGTGATATTTCATAATGATAAGAGGAACAGACATCTATATATCTTTACATTAGTATGATGATATCTACTTTGGTATAAACCCTAGTACTGTTGCTTTTTGAACCACCCAAAATGTCTCGTACTAATGAAGATAATTTTTCTCACTTATAGTGTGACAGTCCAAACCCACCGCTAGTAGATTTGTCCGCTTTGGCCCGTTACGTATTGTTGTCCGCCTCACAATATTAATAAGTGTTTTAAGAGGTTGACGTACGTAACAGGCCAAAGCGGACAATATCTGCTAGCGATAGGCTTGGGCTATTACAAATGGTATCAGAGCGAGTCACCAGGCGGTTTGCGAGTGAGAACGCTAGGCCCCCAAGCGGTGGATTGTGAGATCCCATGTCGATTAGAGAGGGGAGCGAAACATTTATTATAAAGGTATGAAAACCTCTCCCTAGCAGACGTATTTTAAAACCGTGAGGCTGACAGCAATATGTAACGGGCCAAAGCGGACAATATCTGTGAGCGGTGGGCTTGGGCTGTTAGGGTATCAAAGCCAGTCGCCGGGTGGTGTGCCAGCGAGGACGTTGGGCCCCCAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGTGAACAAAACATTGCTTTTAAAGGTGTGGAAACCTTTATCTAGCAGACGCGTTTTAAAACCGTGAGGCTGACGACAATACGTAACGGGCCAAAGCGGACAACATCTGCGAGTAGTGGGCTTGAGCGGTTACATATATACTACTATGAATCTCTCTTTTCCCTGACCAACCCCTTGGCTCTCTACACTGGCGTCAATTGTGCCAGAAATGGAACCAATAGGAGAAGGTTCATTATCTATTTAGGGTGGAATCAACATGTTCATTTAACAATTGCTATTTTGGATCCTTTAGGAATATACTTACATGTATGCCATTCTAAACGATCCCTTCTCATTCTTAAATGTATGTTCCCTGGTTAACTCGTTTTAAGAAGCATTAAAATCAGCCTTCTTTGGGAATTACTGCAAGTTTCAGTCAGATGCACGCAACACAACCATAACTGATATAGTGGTTTTTTCTCTATAAGACTGGTTGCTAATATAATTTTTTACTGCCTTGGGAATTACCGTATTGTTGTCATGGCATATAACCTTGATAAATAAGAAGTCATCCTCCACGAGCATAGTAAAATCATCAGGAGTGGTTCCTACTTAAGCTGCTGTTATATATGGCTTTTCTCAAGTGTGATTCACAAGTCAAGTTATTTTATGGTTTGTTTCAGTCAGGATTAAAGGACATCAAGCATGTATTGGCTGATATAGTGACAATAGTTTCATGACTGAGGTTAAATTTGAATCTCGATGGTTTAACGTGCAGATCATGTGACGTGTGGAACACCAACTTGGATTGGGAAGGGAATCACTTGCATTTGTTTCAAGCGGAAGGGAACTTTTGAACGAATTTGTATCAACCTGACTCCAGTACAGGCAAGTAAATAAAAAAATAAACTTCCAAATTGATTGGAGTAAGAAGGGGAAATAGTTGAGAAATAAATCATAAAGTTACCACTTCCATTGTGGGCGTAATTCTTGGTGAATTTATATTGATCCTTGACATTCTGGCTCTTGTTTGTACTGTGAGTCCCTTAACTTGATGAAAATCATTGTATTGCTAATATCCTTAGAATAACATTTACATTCATGATCTCAGGAAGATAGGCTAAGAAGATTAAAGCAGCGCATGAAGGTCTACTTTGATGGTTCAAGAATCGACCACCAGGTTAGTTTAGTACTCAGATGATTCCTCAAAGCACACCAACTTGAGTTCATATGTGGAATAGTTTCTAAACTATTAATAACATTTGCTTCTAGTGTCATTTTACAAAATCATTATGTTATTACTTTTACGTGTACACCTTGCTTTCTAGAATACTTATTATGAAAATTTCACCAAGAACAGGAGGCTTTAAGAGCTCTGTGGTATGCAGCATACCCTGATCAAGAGCTTCAGGCGTTGGTATCAGATCAATGGAAAGAAATGGGATGGCAGGGAAGAGACCCATCAACTGATTTTAGGTTGTTATCTCATGTATTACCTTTTGTCATGTTATCTCCTTTTCATTGCTCTGAAAAGCTTTTACCTAACCCAGAGGAGCTGGATTTATCTCTTTGGAGAATTTGTTGTTCTTTGCAAAGACGTTCTCAGTAAGATCTCAAACTTCATTTCACTCATTTAAATTTGTAGTTTATTTTCACCTGAAAGAGTTTATGAACTTGGTAAAAAACTCTCCAGTTGGGAGATCCCACGTTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGAAAACCTCTCACTAGCAGACGCGTTGTAAAAACCTTGAGGGAAAACCCGAAAGGAAAATCCCAAAGAGGATAATATCTGCTAGCGGTGGGCTTGAATTGTTACAAATCAGAGTCAGTCACCGAAAGGTGCGAAACACTGATCGTAGTACGGCTAGACCCTCTCCATAGTAGACGCGTTTTAAAACCTTGAGGGAAAGCCCGAAAAGAAAAGCTCAAAGAGAACAATATCTGCTAGCACGAGTGTAACATTTTATAATGCTTTCACTAATCCTACTTTTCCCTTTACATTTCAGACATCTTTCCAACGTCTATTGAGAAAACAAGGAGGAAAGCCAGCAGTTTGGGAATATCCCTTTGCTGTTGCTGGTGTAAACATCACATTTATGCTAATGCAAATGCTTGATCTTGATGTTTGTGAGTATCAAATCCATTTATGCACACTCGTCCAAAGCTCGAGTGACCTCACAATCTTTATACGATACATACGTTACTCCTCTCATTTCTAATCAATTTAATGCAGCAAAACCAAGGACCTTTATCAGATCAGTTTTCCTACAGATGTTATCAGGTAAATCTCAAAACTTAATCCTGCAACATATCAAGTTTGAATTTACTTATCATATGGTATTTTCTGCTAAACAGAGAATGAATGGGCATTTGACCTGCTTTACTGCGTGGCCTTCGTTGTTATGGACAAACAATGGCTGGAAAGAAATGCTACCTACATGGAGTTCAATGTAAGAATAAATATGATATCCTTCAAGATTTAAAAATTTTCACTCTGCAAACAGAGGTTAGCAAAAATGAGATAAATAATCAAATTATCTGTTTGTGGTAGGATGTGTTGAAGTCCACCAGAGCTCAGTTGGAGAAAGAACTTTTAATGGATGATGTGTTACGGATTGAAGATATGCCTTCTTACAACCTTCTTCTAACACTGGATTACAGGTAGAATAATCTGTCACACTAATTATTATTTGTTTATTTTGATGATATTAGCATCGAGGGAACAAAATTAAAAAAAAGATAGAAAAAAAAAAAAAAAACTGTAGAACCCTAAGAAATACTAGTGCCTAAGTTACTTGATGTTCTTTGGATTGTTACAAATTTCAGTATAGGTAGATGATGATATGTTGTGGCCATGCCACTGATTATGCTGATGCTATTGTTATTATTATTAATTTTCGTCTTGGTATTGCCATGAATCTTTTTCATAGTAGTTTTCACTTCGACACTTTTGTCATCATGTTCGATGATTTGAGCCGGTTGGAAGTCTCTTCTCAACGAGGGACTTGATATCCTATGAAAGGGTCTTTGGAATAGTGATCGAAGATTTCTCTAGACTAGCCTGAATGAGCATAGAGACCGTTTTAGAAAGGATTTAAGGACTTTTGTCATTATGTTCGATCATTTGAGCCGATTGAAAGTCTCTTCTCAACGAGTGTTGAGAAGAACTCGCATATTCAAGATTTCAGGTGAAATTCTTGATAATTTGATCCCATGAAAGGGTATTTTCAAACTGCTATCGAAGATTTCACAATAGATCGTTTTTAAAGAACATGTGGATGCAACAGAGTAGCCCAAAACGTAAATGGGCCTGGCCCAGATAGGTATGATGGGCTTTTAATAGCCCAAATATACTTTATTGAATAAAGAGGTCGGAGATTTGGAGTTATAATATTATAATATTTTTCAAAATATGTCACGTTTATTCTTAAAGAATATTCATTCATAAAAGAATATTTAATATATAAAGAATAAATGTGGGATCCTCTTAATTTTATAATCTTGGTTAAGTAATTTAAAATACTGTGGTCCTTCTGGACCGTGAATCTCATCTGTCGCCACGTGTCCTTCTGGAAACATCTACTGGAATATGGAATCACGGCAAAATTACCTCTTCCCATCCCTGTCTGCTTTCTCCAACTCCATCAAATCCTTAGCCAAGAATAAGATTCTCCTAAAACCATGCGATCATGGGCCCCACCATTGGCGTATTCTTACCTTAACCGTTGGATGAGCGGCCGACGAAAAATCCAACGAACAGAACGCGGCAAATTACGCTGACGAATGGTGATTGTATAAAATATAAATTCAAGCCGTTTTGATCTTCGTTTTCTTTCCAGCGAAGGAATAGTGGAGTAGCAAATTTCCGGAGCACATCACCGTAAGGCTGTTGAATCTCTTTGTGTGTGCGGATAAAATTTTGTTATCATTTGTTTTTTCTTTTTGTCTACGCAAGCAATTGCGGTGTTGATCGATCGGAATTAACAGATGGAGAACGAAAGGCAGAATCTAGAGCTGAAACATCTAGGTTTTGTTAGGATCGCTGTGATTCAGACGATTGTATGTGTTACGAATCTGTATGATTACGCGAAGCAGAACTCCGGACCTCTGAGATCTGCGGTTGAAAGTGTGGAGAGCGCTGTTAACACAGTTGTAGCTCCTGCCTACGAGAAGCTCCGAATCGCACCTGATGATGTTCTTGTTTTTCTTGACGAGAAGGTATTCTTTGTTTTCTTTAATCGTTTGGACTCTTTAGATGACTTTCTTGGATCAGTATGTATATTAATTTTTAGATTGTTTTCTGCGATTCAATCGATTGTCGGACGAAGATCGTTCTGGCTGGTGATTGATTAGATTGAGATGTTTTGCATTCCATATTTTTTTTCACTAAATCCAACTCTGAAATCTTGATTACTACGATGAATTTAGTTCTCCAACCTTCTCTATATGATGAGAATCATCGGGAAATCATTTTACCCTGAAATAAAATTAATTAAACTCCAGTGTCTCCGATTGGCCGACTGAAGTACAATTCATATATGATCATACCTGGTAGATACGGTTGAAATTTGAGTTTCAACGATCTATTCAGGAAAAAAAGATGCGTTTAAATCTATTTCAGACTAGTGTAGAATGAATATGAGTTTATGGCCGACCTTACGGAGTGTGCGTTTTTTTTTGCCCGTCCTTTCCACGGAAGAAGATCAGTGAAAGATGAAATGGTGAATTCGTTCGTAATTTATAAGAGGGACTAATAGAAAACATTATGTGTTCTCTGGGATAATGATCCCTGGCTGAAATGAACATTTCTAATCGTGGTGTGAAGTTTGTTGCAGGTTGACAAAGCGACAAATGAATTTGATAAGCGTGCCCCTCCTCTGGCGAAACAAGCCGTTCAAATTACGCAGCATTGTATCCAAAAAGCTGCTGGAACTGGGCAAGAACTTGTGAATGAGTTTCAAACGAGCGGACCACGCGCAGCGTTTTACTATGCAGCGAACGGGTACAAGCAGTTGGTTCTAACCCAAGGAGTGAAGGTTTGGGCATGTCTCAACCGGCTTCCATCGTTCCACAAGTTCGCAGACATGGCAGTGCCAACTGCGGCTCAGTGGTTGGAGAGGTACAACTGCAAGGTGAAAGATATGAGGCAGAAGGGCTACCACGTCTTTGACTATTGTCCTGAAGTTCCTCTGAGTGAGATAGCTGAGGCATTTAAGCAGGGCGAGGCCAAGAAGAAAGAAGCACCTCCAACTACTCCTGAACAAGCTCCACCGAAGAACAATCCGGGTTCAGATTCCGATTCTGAATCCGAATCCGAATCCGAGTCGGTTTCGGTTCCAAACTAGAAAAGGGTTTTTAGTTTCAACACCTAGTCACCTGGTTTGCAAGAGTATATGGTTCATATTAGATGTTGATATGGGACTAGCTCAATGTTTGTATATAGTTTGGACAAATAACTGAAGTTTTAGTTTCCATGTGCGTGGAGGAAGGATAATAAATTCAGTCCTGTCTAGCTAAAACGGGGAGACAAGAGTGATGGACACACCACAATGCTGGCCTCAAGAACTAGTGAACAAAGGGATTCAACCGTATCTGCTTTATTTATAAATTGAAGTTTCTGGCCTTTCAGGAACGACAGTACCTCTAGTTCCCTCCCAACAAAAAGCTATATTATAGTTTGTTCTTAATAATTAAAATTTTTCATGACTTGTCGACTCATTTTCAAAAT

mRNA sequence

AACGGTCTTAAGAGAGCAAAATAGAAATGGTTCACCCGCGAGAGCAATAGAATGAGAAAGAGAGAACCCTTAGTCTCATAATCTCATTTCAGTTGCGGTGATTCGGATGATAAGCGTCGGAGAAGAGAACTGAGGGTTGGAGGAATCGGAGAATTACAAGATTATTCGGCGCTGAGATGAGCTTAGTCAACACTCACAGAAGCTGCGCGCCAATTCGTTCACTCTCTCCTGCTTCATCCTCCATTTCCCGCTGCGCTCACACTTCCTCCTCTGATCATGTGACGTGTGGAACACCAACTTGGATTGGGAAGGGAATCACTTGCATTTGTTTCAAGCGGAAGGGAACTTTTGAACGAATTTGTATCAACCTGACTCCAGTACAGGAAGATAGGCTAAGAAGATTAAAGCAGCGCATGAAGGTCTACTTTGATGGTTCAAGAATCGACCACCAGGAGGCTTTAAGAGCTCTGTGGTATGCAGCATACCCTGATCAAGAGCTTCAGGCGTTGGTATCAGATCAATGGAAAGAAATGGGATGGCAGGGAAGAGACCCATCAACTGATTTTAGAGGAGCTGGATTTATCTCTTTGGAGAATTTGTTGTTCTTTGCAAAGACGTTCTCAACATCTTTCCAACGTCTATTGAGAAAACAAGGAGGAAAGCCAGCAGTTTGGGAATATCCCTTTGCTGTTGCTGGTGTAAACATCACATTTATGCTAATGCAAATGCTTGATCTTGATGTTTCAAAACCAAGGACCTTTATCAGATCAGTTTTCCTACAGATGTTATCAGAGAATGAATGGGCATTTGACCTGCTTTACTGCGTGGCCTTCGTTGTTATGGACAAACAATGGCTGGAAAGAAATGCTACCTACATGGAGTTCAATGATGTGTTGAAGTCCACCAGAGCTCAGTTGGAGAAAGAACTTTTAATGGATGATGTGTTACGGATTGAAGATATGCCTTCTTACAACCTTCTTCTAACACTGGATTACAGGTAGAATAATCTGTCACACTAATTATTATTTGTTTATTTTGATGATATTAGCATCGAGGGAACAAAATTAAAAAAAAGATAGAAAAAAAAAAAAAAAACTGTAGAACCCTAAGAAATACTAGTGCCTAAGTTACTTGATGTTCTTTGGATTGTTACAAATTTCAGTATAGGTAGATGATGATATGTTGTGGCCATGCCACTGATTATGCTGATGCTATTGTTATTATTATTAATTTTCGTCTTGGTATTGCCATGAATCTTTTTCATAGTAGTTTTCACTTCGACACTTTTGTCATCATGTTCGATGATTTGAGCCGGTTGGAAGTCTCTTCTCAACGAGGGACTTGATATCCTATGAAAGGGTCTTTGGAATAGTGATCGAAGATTTCTCTAGACTAGCCTGAATGAGCATAGAGACCGTTTTAGAAAGGATTTAAGGACTTTTGTCATTATGTTCGATCATTTGAGCCGATTGAAAGTCTCTTCTCAACGAGTGTTGAGAAGAACTCGCATATTCAAGATTTCAGGTGAAATTCTTGATAATTTGATCCCATGAAAGGGTATTTTCAAACTGCTATCGAAGATTTCACAATAGATCGTTTTTAAAGAACATGTGGATGCAACAGAGTAGCCCAAAACGTAAATGGGCCTGGCCCAGATAGGTATGATGGGCTTTTAATAGCCCAAATATACTTTATTGAATAAAGAGGTCGGAGATTTGGAGTTATAATATTATAATATTTTTCAAAATATGTCACGTTTATTCTTAAAGAATATTCATTCATAAAAGAATATTTAATATATAAAGAATAAATGTGGGATCCTCTTAATTTTATAATCTTGGTTAAGTAATTTAAAATACTGTGGTCCTTCTGGACCGTGAATCTCATCTGTCGCCACGTGTCCTTCTGGAAACATCTACTGGAATATGGAATCACGGCAAAATTACCTCTTCCCATCCCTGTCTGCTTTCTCCAACTCCATCAAATCCTTAGCCAAGAATAAGATTCTCCTAAAACCATGCGATCATGGGCCCCACCATTGGCGTATTCTTACCTTAACCGTTGGATGAGCGGCCGACGAAAAATCCAACGAACAGAACGCGGCAAATTACGCTGACGAATGGTGATTGTATAAAATATAAATTCAAGCCGTTTTGATCTTCGTTTTCTTTCCAGCGAAGGAATAGTGGAGTAGCAAATTTCCGGAGCACATCACCATGGAGAACGAAAGGCAGAATCTAGAGCTGAAACATCTAGGTTTTGTTAGGATCGCTGTGATTCAGACGATTGTATGTGTTACGAATCTGTATGATTACGCGAAGCAGAACTCCGGACCTCTGAGATCTGCGGTTGAAAGTGTGGAGAGCGCTGTTAACACAGTTGTAGCTCCTGCCTACGAGAAGCTCCGAATCGCACCTGATGATGTTCTTGTTTTTCTTGACGAGAAGGTTGACAAAGCGACAAATGAATTTGATAAGCGTGCCCCTCCTCTGGCGAAACAAGCCGTTCAAATTACGCAGCATTGTATCCAAAAAGCTGCTGGAACTGGGCAAGAACTTGTGAATGAGTTTCAAACGAGCGGACCACGCGCAGCGTTTTACTATGCAGCGAACGGGTACAAGCAGTTGGTTCTAACCCAAGGAGTGAAGGTTTGGGCATGTCTCAACCGGCTTCCATCGTTCCACAAGTTCGCAGACATGGCAGTGCCAACTGCGGCTCAGTGGTTGGAGAGGTACAACTGCAAGGTGAAAGATATGAGGCAGAAGGGCTACCACGTCTTTGACTATTGTCCTGAAGTTCCTCTGAGTGAGATAGCTGAGGCATTTAAGCAGGGCGAGGCCAAGAAGAAAGAAGCACCTCCAACTACTCCTGAACAAGCTCCACCGAAGAACAATCCGGGTTCAGATTCCGATTCTGAATCCGAATCCGAATCCGAGTCGGTTTCGGTTCCAAACTAGAAAAGGGTTTTTAGTTTCAACACCTAGTCACCTGGTTTGCAAGAGTATATGGTTCATATTAGATGTTGATATGGGACTAGCTCAATGTTTGTATATAGTTTGGACAAATAACTGAAGTTTTAGTTTCCATGTGCGTGGAGGAAGGATAATAAATTCAGTCCTGTCTAGCTAAAACGGGGAGACAAGAGTGATGGACACACCACAATGCTGGCCTCAAGAACTAGTGAACAAAGGGATTCAACCGTATCTGCTTTATTTATAAATTGAAGTTTCTGGCCTTTCAGGAACGACAGTACCTCTAGTTCCCTCCCAACAAAAAGCTATATTATAGTTTGTTCTTAATAATTAAAATTTTTCATGACTTGTCGACTCATTTTCAAAAT

Coding sequence (CDS)

ATGGAGAACGAAAGGCAGAATCTAGAGCTGAAACATCTAGGTTTTGTTAGGATCGCTGTGATTCAGACGATTGTATGTGTTACGAATCTGTATGATTACGCGAAGCAGAACTCCGGACCTCTGAGATCTGCGGTTGAAAGTGTGGAGAGCGCTGTTAACACAGTTGTAGCTCCTGCCTACGAGAAGCTCCGAATCGCACCTGATGATGTTCTTGTTTTTCTTGACGAGAAGGTTGACAAAGCGACAAATGAATTTGATAAGCGTGCCCCTCCTCTGGCGAAACAAGCCGTTCAAATTACGCAGCATTGTATCCAAAAAGCTGCTGGAACTGGGCAAGAACTTGTGAATGAGTTTCAAACGAGCGGACCACGCGCAGCGTTTTACTATGCAGCGAACGGGTACAAGCAGTTGGTTCTAACCCAAGGAGTGAAGGTTTGGGCATGTCTCAACCGGCTTCCATCGTTCCACAAGTTCGCAGACATGGCAGTGCCAACTGCGGCTCAGTGGTTGGAGAGGTACAACTGCAAGGTGAAAGATATGAGGCAGAAGGGCTACCACGTCTTTGACTATTGTCCTGAAGTTCCTCTGAGTGAGATAGCTGAGGCATTTAAGCAGGGCGAGGCCAAGAAGAAAGAAGCACCTCCAACTACTCCTGAACAAGCTCCACCGAAGAACAATCCGGGTTCAGATTCCGATTCTGAATCCGAATCCGAATCCGAGTCGGTTTCGGTTCCAAACTAG

Protein sequence

MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAYEKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQTSGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDMRQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESESVSVPN

Homology

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy Swiss-Prot
Match: Q9FYF7 (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana OX=3702 GN=At1g67360 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.9e-51
Identity = 113/243 (46.50%), Postives = 152/243 (62.55%), Query Frame = 0


Query: 1   MENERQN---LELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVA 60
           ME E++N   + LKHL FVRIA I  +  V+NLY+YAKQNSGPL+SAVE VE AV TVV 
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNE 120
           P Y+K +  PD +LVFLD KV + + +FD+ APP+AK+ V      I KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTSGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKV 180
            +T GP+AAF YAA  YK  V+T  VKVWA LN+    H   D A+P AA +  RYN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KDMRQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESES 240
            DM   GY +  Y P VP+ +I +A+++ +A++K+   T  ++   +    +D D +S S
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKKGGDTAGKKG--ETTDAADGD-KSSS 240

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 8.3e-33
Identity = 79/216 (36.57%), Postives = 114/216 (52.78%), Query Frame = 0


Query: 10  LKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAYEKLRIAPDD 69
           LK+L FV++A I  IVC ++LY+YAK+NSGPL+  V++VE  V TV+ P YEK    P +
Sbjct: 20  LKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFE 79

Query: 70  VLVFLDEKVDKATNEFDKRAPPLAK----QAVQITQHCIQKAAGTGQEL----------- 129
           +L+F+D KV+ +  E ++  P L K    QA+ + Q   + A     E+           
Sbjct: 80  LLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKN 139

Query: 130 --VNEFQTSGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLER 189
              N +    P A      + Y+ +     V  W  LNRLP F + A + VPTAA W E+
Sbjct: 140 ITKNVYSKCEPTAK--ELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEK 199

Query: 190 YNCKVKDMRQKGYHVFDYCPEVPLSEIAEAFKQGEA 209
           YN  V    ++GY V  Y P +P   IA+ F+ G A
Sbjct: 200 YNQSVSYTAERGYTVALYLPLIPTERIAKVFQDGSA 233

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29
Identity = 80/217 (36.87%), Postives = 110/217 (50.69%), Query Frame = 0


Query: 10  LKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAYEKLRIAPDD 69
           LK+L FV+ A ++ ++    +Y  AK  SGPL+  VESVE AV TVV P YEK    P +
Sbjct: 22  LKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVE 81

Query: 70  VLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQTSG------- 129
           VL ++D+KVD +  E D+R PP+ KQ         Q A    + L +E + +G       
Sbjct: 82  VLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASG 141

Query: 130 ----------PRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLER 189
                     P A   YA   Y+       V  W  LN+LP F + A +AVPTAA   E+
Sbjct: 142 MAKSVYSKYEPAAKELYA--NYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEK 201

Query: 190 YNCKVKDMRQKGYHVFDYCPEVPLSEIAEAFKQGEAK 210
           YN  V    +KGY V  Y P VP   I++ F + +A+
Sbjct: 202 YNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAE 236

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy Swiss-Prot
Match: O82246 (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana OX=3702 GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27
Identity = 67/207 (32.37%), Postives = 107/207 (51.69%), Query Frame = 0


Query: 8   LELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAYEKLRIAP 67
           ++LKHL F+++A +    C + LY+ AK N+GPL+  VE++E  V TV+AP YEK    P
Sbjct: 39  MKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVP 98

Query: 68  DDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTG-----QELVNEFQTSG 127
             +L+F+D KVD    + +   P L KQA         +   TG     + +    +   
Sbjct: 99  FKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKY 158

Query: 128 PRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDMRQ 187
             AA YYAA             +W  LN+LP F + A + +PTA  W E+YN  V+ +  
Sbjct: 159 EPAAEYYAAT------------LWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGD 218

Query: 188 KGYHVFDYCPEVPLSEIAEAFKQGEAK 210
           + Y   +Y P +P+ +I++  +Q + +
Sbjct: 219 RDYFGAEYLPMIPIEKISDILEQDQCR 233

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.7e-25
Identity = 76/228 (33.33%), Postives = 106/228 (46.49%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           ME   +   L++L FV+ A  Q +V     Y YAKQ +GPLR  V+ VE  V  VV P Y
Sbjct: 26  MEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVY 85

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKA-----AGTGQELV 120
           ++    P D+L FLD KV ++  E D+R PP+ K+A  + +    +       GT   L 
Sbjct: 86  DRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLA 145

Query: 121 -NEFQTSGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYN 180
            +    + PRA   Y    Y+ +   +  + WA LNRLP         +P AA    RYN
Sbjct: 146 KSAIARAEPRARDLYTR--YEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYN 205

Query: 181 CKVKDMRQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAP 223
             V D  ++G  V  Y P VP   ++  F    A    +P   PE  P
Sbjct: 206 TAVADGAKRGSAVATYLPLVPTERLSRVFGYPLADAAASP--APEMQP 249

[Close]

BLAST of Cp4.1LG01g16130 vs. NCBI nr
Match: XP_023541052.1 (REF/SRPP-like protein At1g67360 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 489 bits (1259), Expect = 2.67e-174
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
           SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE 240
           RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE 240

Query: 241 SVSVPN 246
           SVSVPN
Sbjct: 241 SVSVPN 246

[Close]

BLAST of Cp4.1LG01g16130 vs. NCBI nr
Match: XP_022956720.1 (REF/SRPP-like protein At1g67360 [Cucurbita moschata])

HSP 1 Score: 476 bits (1226), Expect = 2.87e-169
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLDEKVDKAT+EFDKRAPPLAKQAVQITQHCIQKAA TGQE VNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQEFVNEFQT 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
           SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE 240
           RQKGYHVFDYCPEVPLSEIAEAFKQG+AKKKEAPPTTPEQAPPKN PGSDSDSESESESE
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGKAKKKEAPPTTPEQAPPKNKPGSDSDSESESESE 240

Query: 241 SVSVPN 246
            VSVPN
Sbjct: 241 LVSVPN 246

[Close]

BLAST of Cp4.1LG01g16130 vs. NCBI nr
Match: XP_022998565.1 (REF/SRPP-like protein At1g67360 [Cucurbita maxima])

HSP 1 Score: 476 bits (1225), Expect = 4.07e-169
Identity = 241/246 (97.97%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLDEKVDKAT+EFDKRAPPLAKQAVQITQHCIQKAA TGQELVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQELVNEFQT 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
           SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLE YNCKVK M
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLEWYNCKVKGM 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE 240
           RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKN PGSDSDSESESESE
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNKPGSDSDSESESESE 240

Query: 241 SVSVPN 246
           SVSVPN
Sbjct: 241 SVSVPN 246

[Close]

BLAST of Cp4.1LG01g16130 vs. NCBI nr
Match: KAG7034710.1 (REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 465 bits (1196), Expect = 9.98e-165
Identity = 237/246 (96.34%), Postives = 238/246 (96.75%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAV SVESAVNTVVAPAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVGSVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLDEKVDKAT+EFDKRAPPLAKQAVQITQHCIQKAA TGQE VNEFQ 
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQEFVNEFQM 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
           SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE 240
           RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKN PGS SDSESESES 
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNKPGSGSDSESESES- 240

Query: 241 SVSVPN 246
            VSVPN
Sbjct: 241 -VSVPN 244

[Close]

BLAST of Cp4.1LG01g16130 vs. NCBI nr
Match: KAG6601596.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 467 bits (1202), Expect = 2.29e-161
Identity = 238/246 (96.75%), Postives = 239/246 (97.15%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAV SVESAVNTVVAPAY
Sbjct: 282 MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVGSVESAVNTVVAPAY 341

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLDEKVDKAT+EFDKRAPPLAKQAVQITQHCIQKAA TGQE VNEFQT
Sbjct: 342 EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQEFVNEFQT 401

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
           SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM
Sbjct: 402 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 461

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE 240
           RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKN PGS SDSESESES 
Sbjct: 462 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNKPGSGSDSESESES- 521

Query: 241 SVSVPN 246
            VSVPN
Sbjct: 522 -VSVPN 525

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy TrEMBL
Match: A0A6J1GYJ5 (REF/SRPP-like protein At1g67360 OS=Cucurbita moschata OX=3662 GN=LOC111458353 PE=3 SV=1)

HSP 1 Score: 476 bits (1226), Expect = 1.39e-169
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLDEKVDKAT+EFDKRAPPLAKQAVQITQHCIQKAA TGQE VNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQEFVNEFQT 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
           SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE 240
           RQKGYHVFDYCPEVPLSEIAEAFKQG+AKKKEAPPTTPEQAPPKN PGSDSDSESESESE
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGKAKKKEAPPTTPEQAPPKNKPGSDSDSESESESE 240

Query: 241 SVSVPN 246
            VSVPN
Sbjct: 241 LVSVPN 246

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy TrEMBL
Match: A0A6J1KCW0 (REF/SRPP-like protein At1g67360 OS=Cucurbita maxima OX=3661 GN=LOC111493158 PE=3 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 1.97e-169
Identity = 241/246 (97.97%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY
Sbjct: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLDEKVDKAT+EFDKRAPPLAKQAVQITQHCIQKAA TGQELVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDEKVDKATHEFDKRAPPLAKQAVQITQHCIQKAARTGQELVNEFQT 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
           SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLE YNCKVK M
Sbjct: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLEWYNCKVKGM 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESESESE 240
           RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKN PGSDSDSESESESE
Sbjct: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNKPGSDSDSESESESE 240

Query: 241 SVSVPN 246
           SVSVPN
Sbjct: 241 SVSVPN 246

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy TrEMBL
Match: A0A5D3CW84 (REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002240 PE=3 SV=1)

HSP 1 Score: 404 bits (1038), Expect = 6.00e-141
Identity = 210/247 (85.02%), Postives = 225/247 (91.09%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           ME+E QNLELKHLGFVRIA+IQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVV PAY
Sbjct: 1   MESESQNLELKHLGFVRIALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLD KVDKAT+EFDKRAPPLAKQA QITQH IQKAA TG+ELVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGKELVNEFQT 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
            GPRAAF+YAAN YKQLVL QGVK+WA LNRLPSFHKFADMAVPTAAQWLE YN KVK++
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKMWAGLNRLPSFHKFADMAVPTAAQWLESYNSKVKEL 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKE-APPTTPEQAPPKNNPGSDSDSESESES 240
           RQKGYHVFDYCPEVP+S+IA+AFKQGEAK+KE   PTTPEQAP KN  GSDSDS+S+S S
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQGEAKEKEETSPTTPEQAPSKNEAGSDSDSDSDSAS 240

Query: 241 ESVSVPN 246
             V+ PN
Sbjct: 241 --VAGPN 245

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy TrEMBL
Match: A0A1S3BEY9 (REF/SRPP-like protein At1g67360 OS=Cucumis melo OX=3656 GN=LOC103488889 PE=3 SV=1)

HSP 1 Score: 404 bits (1038), Expect = 6.00e-141
Identity = 210/247 (85.02%), Postives = 225/247 (91.09%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           ME+E QNLELKHLGFVRIA+IQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVV PAY
Sbjct: 1   MESESQNLELKHLGFVRIALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLD KVDKAT+EFDKRAPPLAKQA QITQH IQKAA TG+ELVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGKELVNEFQT 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
            GPRAAF+YAAN YKQLVL QGVK+WA LNRLPSFHKFADMAVPTAAQWLE YN KVK++
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKMWAGLNRLPSFHKFADMAVPTAAQWLESYNSKVKEL 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKE-APPTTPEQAPPKNNPGSDSDSESESES 240
           RQKGYHVFDYCPEVP+S+IA+AFKQGEAK+KE   PTTPEQAP KN  GSDSDS+S+S S
Sbjct: 181 RQKGYHVFDYCPEVPVSKIAKAFKQGEAKEKEETSPTTPEQAPSKNEAGSDSDSDSDSAS 240

Query: 241 ESVSVPN 246
             V+ PN
Sbjct: 241 --VAGPN 245

[Close]

BLAST of Cp4.1LG01g16130 vs. ExPASy TrEMBL
Match: A0A0A0KS04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589910 PE=3 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 1.20e-138
Identity = 203/240 (84.58%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MENERQNLELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAY 60
           ME+E QNLELKHLGFVR+A+IQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVV PAY
Sbjct: 1   MESESQNLELKHLGFVRVALIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVTPAY 60

Query: 61  EKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQT 120
           EKLRIAPDDVLVFLD KVDKAT+EFDKRAPPLAKQA QITQH IQKAA TGQ+LVNEFQT
Sbjct: 61  EKLRIAPDDVLVFLDGKVDKATHEFDKRAPPLAKQAAQITQHFIQKAARTGQQLVNEFQT 120

Query: 121 SGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDM 180
            GPRAAF+YAAN YKQLVL QGVK+WA LNRLPSFHKFADMAVPT AQWLE YN KVK++
Sbjct: 121 GGPRAAFHYAANEYKQLVLDQGVKIWAGLNRLPSFHKFADMAVPTTAQWLESYNSKVKEL 180

Query: 181 RQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKE-APPTTPEQAPPKNNPGSDSDSESESES 239
           RQKGYHVFDYCPEVP+SEIA+AFKQ E+KKKE   P TPEQAP K+  GSDSDS+S+S S
Sbjct: 181 RQKGYHVFDYCPEVPVSEIAKAFKQDESKKKEETSPNTPEQAPSKHEAGSDSDSDSDSAS 240

[Close]

BLAST of Cp4.1LG01g16130 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-52
Identity = 113/243 (46.50%), Postives = 152/243 (62.55%), Query Frame = 0


Query: 1   MENERQN---LELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVA 60
           ME E++N   + LKHL FVRIA I  +  V+NLY+YAKQNSGPL+SAVE VE AV TVV 
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNE 120
           P Y+K +  PD +LVFLD KV + + +FD+ APP+AK+ V      I KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTSGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKV 180
            +T GP+AAF YAA  YK  V+T  VKVWA LN+    H   D A+P AA +  RYN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KDMRQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESES 240
            DM   GY +  Y P VP+ +I +A+++ +A++K+   T  ++   +    +D D +S S
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKKGGDTAGKKG--ETTDAADGD-KSSS 240

[Close]

BLAST of Cp4.1LG01g16130 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-52
Identity = 113/243 (46.50%), Postives = 152/243 (62.55%), Query Frame = 0


Query: 1   MENERQN---LELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVA 60
           ME E++N   + LKHL FVRIA I  +  V+NLY+YAKQNSGPL+SAVE VE AV TVV 
Sbjct: 1   METEKKNSKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVT 60

Query: 61  PAYEKLRIAPDDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNE 120
           P Y+K +  PD +LVFLD KV + + +FD+ APP+AK+ V      I KA    Q  V E
Sbjct: 61  PVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKE 120

Query: 121 FQTSGPRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKV 180
            +T GP+AAF YAA  YK  V+T  VKVWA LN+    H   D A+P AA +  RYN  V
Sbjct: 121 ARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLV 180

Query: 181 KDMRQKGYHVFDYCPEVPLSEIAEAFKQGEAKKKEAPPTTPEQAPPKNNPGSDSDSESES 240
            DM   GY +  Y P VP+ +I +A+++ +A++K+   T  ++   +    +D D +S S
Sbjct: 181 TDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRKKGGDTAGKKG--ETTDAADGD-KSSS 240

[Close]

BLAST of Cp4.1LG01g16130 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 80/217 (36.87%), Postives = 110/217 (50.69%), Query Frame = 0


Query: 10  LKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAYEKLRIAPDD 69
           LK+L FV+ A ++ ++    +Y  AK  SGPL+  VESVE AV TVV P YEK    P +
Sbjct: 22  LKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVE 81

Query: 70  VLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTGQELVNEFQTSG------- 129
           VL ++D+KVD +  E D+R PP+ KQ         Q A    + L +E + +G       
Sbjct: 82  VLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASG 141

Query: 130 ----------PRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLER 189
                     P A   YA   Y+       V  W  LN+LP F + A +AVPTAA   E+
Sbjct: 142 MAKSVYSKYEPAAKELYA--NYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEK 201

Query: 190 YNCKVKDMRQKGYHVFDYCPEVPLSEIAEAFKQGEAK 210
           YN  V    +KGY V  Y P VP   I++ F + +A+
Sbjct: 202 YNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAE 236

[Close]

BLAST of Cp4.1LG01g16130 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 67/207 (32.37%), Postives = 107/207 (51.69%), Query Frame = 0


Query: 8   LELKHLGFVRIAVIQTIVCVTNLYDYAKQNSGPLRSAVESVESAVNTVVAPAYEKLRIAP 67
           ++LKHL F+++A +    C + LY+ AK N+GPL+  VE++E  V TV+AP YEK    P
Sbjct: 39  MKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVP 98

Query: 68  DDVLVFLDEKVDKATNEFDKRAPPLAKQAVQITQHCIQKAAGTG-----QELVNEFQTSG 127
             +L+F+D KVD    + +   P L KQA         +   TG     + +    +   
Sbjct: 99  FKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKY 158

Query: 128 PRAAFYYAANGYKQLVLTQGVKVWACLNRLPSFHKFADMAVPTAAQWLERYNCKVKDMRQ 187
             AA YYAA             +W  LN+LP F + A + +PTA  W E+YN  V+ +  
Sbjct: 159 EPAAEYYAAT------------LWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGD 218

Query: 188 KGYHVFDYCPEVPLSEIAEAFKQGEAK 210
           + Y   +Y P +P+ +I++  +Q + +
Sbjct: 219 RDYFGAEYLPMIPIEKISDILEQDQCR 233

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g16130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF7	3.9e-51	46.50	REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana OX=3702 GN=At1g67360 PE=...	[more]
Q9SW70	8.3e-33	36.57	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
Q9MA63	1.9e-29	36.87	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
O82246	1.8e-27	32.37	REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana OX=3702 GN=At2g47780 PE=...	[more]
A2Y0H2	3.7e-25	33.33	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0...	[more]

BLAST of Cp4.1LG01g16130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541052.1	2.67e-174	100.00	REF/SRPP-like protein At1g67360 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022956720.1	2.87e-169	97.56	REF/SRPP-like protein At1g67360 [Cucurbita moschata]	[more]
XP_022998565.1	4.07e-169	97.97	REF/SRPP-like protein At1g67360 [Cucurbita maxima]	[more]
KAG7034710.1	9.98e-165	96.34	REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601596.1	2.29e-161	96.75	REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG01g16130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYJ5	1.39e-169	97.56	REF/SRPP-like protein At1g67360 OS=Cucurbita moschata OX=3662 GN=LOC111458353 PE...	[more]
A0A6J1KCW0	1.97e-169	97.97	REF/SRPP-like protein At1g67360 OS=Cucurbita maxima OX=3661 GN=LOC111493158 PE=3...	[more]
A0A5D3CW84	6.00e-141	85.02	REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35...	[more]
A0A1S3BEY9	6.00e-141	85.02	REF/SRPP-like protein At1g67360 OS=Cucumis melo OX=3656 GN=LOC103488889 PE=3 SV=...	[more]
A0A0A0KS04	1.20e-138	84.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589910 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g16130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67360.2	2.8e-52	46.50	Rubber elongation factor protein (REF)	[more]
AT1G67360.1	2.8e-52	46.50	Rubber elongation factor protein (REF)	[more]
AT3G05500.1	1.4e-30	36.87	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	1.3e-28	32.37	Rubber elongation factor protein (REF)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 5..205 e-value: 1.3E-73 score: 247.3
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 1..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..246
None	No IPR available	PANTHER	PTHR33732:SF2	RUBBER ELONGATION FACTOR PROTEIN	coord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g16130.1	Cp4.1LG01g16130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid droplet organization
biological_process	GO:0009555	pollen development
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet