Cp4.1LG01g16040 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCATGTGACGGCTTCTTCAGGTTCGTCGATCAACGGGCCACCTTCTAGGGCTCCTTCCTCCCTTTCATCTACGGCTTTTACGAATTTCCCTCTCATTTCTGCTCTCATTTCCTTCGCGGTTGCCCAGTTCATCAAGTTCTTCACCTCCTGGTATTTTCTCATTTCCTTCGGATCTGATTCAATTCTTAGGTTTTCACTGCATATGAATATCGTACGAGCGTTCTTGTTTGTTAGTGATAACCGATGTTCCCATGAAATCTGGATTCTGTTTTTCTTCCTCAAGACTTGATCACGGCATTGAAGAACCAATCAATTTCTTGTTACATTTCAGGTATAAGGAACGACGATGGGATTTTAAGAGACTAATTGGATCGGGGGGAATGCCTTCATCTCATTCTTCCACTGTTTCTGCTCTTGCTGTAGCCATTGGCCTCCAAGAAGGCTTTGGAGCATCAGTCTTTGCTGTTGCATTGATCTTAGCATGTATTGTATGGTCTCCTTATTCATTTTATGCCTACCATTCTGATTCAAGTTGTTGTAAATTTCCTGGAACGATTCTAAGAAAAAAAAAATGGTGGCAGGTAATGTACGATGCAACTGGTGTGAGATTACATGCTGGACGCCAAGCAGAGGTTATATGCTTCTTTGTTCTATACCTGTAACAGCTTGCCCAACCCGCCCACAGCTAAAAGATATTGTCCTCTTTTGGCTTTTACTTTTGGGCTCTCCTCAGTATTTTTAAAATGACATTATAAACAATGTTCGTTCCCCTCTCCAACCGACGTAGGATCTCACAATCCACTCCCCCTTTGAGGCCCAGTGTCCTCACTTATACTCGTTTCCCTCTCCAATCAATGTGGGATCTCACAATACACCCCCTTCAAGGCCCCCTTCAAGGCCCAGTGTTCTTGTTGGCACTCGTTCCCTTCTCCAATCGATGTGGGGTTCTCACAATACACCCATCTTCGAGGCCCAGTATCCTTGCTGACACTTGTTTCCCTCGCCAATCGACGTTGGATCTCACGATACTCCCAAGAAAATGACTCTTCCTCCTTTTCTTTTTCCTTTTCTACTCAATTGCTTTTATTTGGACATTACTGTTATATCTTAAAGCTTTATCTTTTCTATTGACTGTTTAATATACTCTAACTAGTTTTATTTTTTTAGGTTTTGAATCAAATAGTTTATGAACTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTTCCATTATGATGACACTGTACAGTAATTGATTCTTGTCTATGAAAGTGACATGTTAATGAAATATCATTTTTATTTCACTGCAAATTCAGGCTTCCATGACCTTCATATGCATGTTGAAGACTATGAAATTAGCTTTGTGATAAAATGGGAGATTGTTAGTTTTTACTATCACTTTTGGTATATTGTGGAACTGGAAATGATGTGGACACATGGAGTGCCCTTTGAATAACTGATTTTTTGAATGCTTTCTCAATGTGTTGGCACCTTCTGGTTTCAAAGAGCAGCTAAAACAAGTAAAGGATATTCATTTGTAGCTTTTTTACGTTATCTACAAAAGAAGTCAGGATTCCAATGAATTGCCTTAAAGTATAGTATGAGAATAGCATATTCAGGATTCACTTTCATTGAAGAAAGATTTGAGGCCATTCTTTCTAACGTTGTGGCTACATTCTATTTGATTCCAACAGGTTGTAGCTGGAGGATTGCTTGGTATTGTCACCTCTTCAATTGGCCATTTGATGATCATAATGACTAGGCCTTGATCATTGTGCTGAAGAAGATCGAGCGGATAAACCAGGTGTTGCTCTGATCTCATCATTTTAATGAAGGCTGTTTGATGGAAACTTGAGTATGAAATTATTCTTGTGAATATGGTCTGCACATAACCTTTGATCAATGAGATATTTCAGAATCATTGTTTGATTGATTGATTGATTGCCGTATTTAGTGCAATAGGAAGGACCAATAAGCTGCAGCGACATCTGCAGTATATCAGAAAACAAACATATAGCTCTTAGCACTTAAGTTTTAGATAACTCTAATACCATTTGCTTCGACTCAATTCTGATTCATGTAGTCTTCCAACTTTGTGGTTACTACTCAACTAATTCTGGATAACATAATGCATGATTATATTATTACTTTATTGATAGAAAGTCCATTTATGACTAGCTAATTTTCTCCGACTTCACTTGTCGAGTCGTACAAATCTTGTATAGTGCCCCCT ATGGGTCATGTGACGGCTTCTTCAGGTTCGTCGATCAACGGGCCACCTTCTAGGGCTCCTTCCTCCCTTTCATCTACGGCTTTTACGAATTTCCCTCTCATTTCTGCTCTCATTTCCTTCGCGGTTGCCCAGTTCATCAAGTTCTTCACCTCCTGGTATTTTCTCATTTCCTTCGGATCTGATTCAATTCTTAGGTATAAGGAACGACGATGGGATTTTAAGAGACTAATTGGATCGGGGGGAATGCCTTCATCTCATTCTTCCACTGTTTCTGCTCTTGCTGTAGCCATTGGCCTCCAAGAAGGCTTTGGAGCATCAGTCTTTGCTGTTGCATTGATCTTAGCATGTATTGTATGGTCTCCTTATTCATTTTATGCCTACCATTCTGATTCAAGTTGTTGTAAATTTCCTGGAACGATTCTAAGAAAAAAAAAATGGTGGCAGGTTTTGAATCAAATAGTTTATGAACTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTGTAGCTGGAGGATTGCTTGGTATTGTCACCTCTTCAATTGGCCATTTGATGATCATAATGACTAGGCCTTGATCATTGTGCTGAAGAAGATCGAGCGGATAAACCAGGTGTTGCTCTGATCTCATCATTTTAATGAAGGCTGTTTGATGGAAACTTGAGTATGAAATTATTCTTGTGAATATGGTCTGCACATAACCTTTGATCAATGAGATATTTCAGAATCATTGTTTGATTGATTGATTGATTGCCGTATTTAGTGCAATAGGAAGGACCAATAAGCTGCAGCGACATCTGCAGTATATCAGAAAACAAACATATAGCTCTTAGCACTTAAGTTTTAGATAACTCTAATACCATTTGCTTCGACTCAATTCTGATTCATGTAGTCTTCCAACTTTGTGGTTACTACTCAACTAATTCTGGATAACATAATGCATGATTATATTATTACTTTATTGATAGAAAGTCCATTTATGACTAGCTAATTTTCTCCGACTTCACTTGTCGAGTCGTACAAATCTTGTATAGTGCCCCCT ATGGGTCATGTGACGGCTTCTTCAGGTTCGTCGATCAACGGGCCACCTTCTAGGGCTCCTTCCTCCCTTTCATCTACGGCTTTTACGAATTTCCCTCTCATTTCTGCTCTCATTTCCTTCGCGGTTGCCCAGTTCATCAAGTTCTTCACCTCCTGGTATTTTCTCATTTCCTTCGGATCTGATTCAATTCTTAGGTATAAGGAACGACGATGGGATTTTAAGAGACTAATTGGATCGGGGGGAATGCCTTCATCTCATTCTTCCACTGTTTCTGCTCTTGCTGTAGCCATTGGCCTCCAAGAAGGCTTTGGAGCATCAGTCTTTGCTGTTGCATTGATCTTAGCATGTATTGTATGGTCTCCTTATTCATTTTATGCCTACCATTCTGATTCAAGTTGTTGTAAATTTCCTGGAACGATTCTAAGAAAAAAAAAATGGTGGCAGGTTTTGAATCAAATAGTTTATGAACTTCCTGCTGAACATCCTTTGGCTGAGAGCAGACCATTGCGAGAACTTCTTGGCCACACCCCTCCCCAGGTTGTAGCTGGAGGATTGCTTGGTATTGTCACCTCTTCAATTGGCCATTTGATGATCATAATGACTAGGCCTTGA MGHVTASSGSSINGPPSRAPSSLSSTAFTNFPLISALISFAVAQFIKFFTSWYFLISFGSDSILRYKERRWDFKRLIGSGGMPSSHSSTVSALAVAIGLQEGFGASVFAVALILACIVWSPYSFYAYHSDSSCCKFPGTILRKKKWWQVLNQIVYELPAEHPLAESRPLRELLGHTPPQVVAGGLLGIVTSSIGHLMIIMTRP Homology
BLAST of Cp4.1LG01g16040 vs. ExPASy Swiss-Prot
Match: O32107 (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) OX=224308 GN=yuiD PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11 Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. NCBI nr
Match: XP_023554720.1 (uncharacterized protein LOC111811897 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 285 bits (730), Expect = 1.64e-95 Identity = 163/203 (80.30%), Postives = 167/203 (82.27%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. NCBI nr
Match: XP_022998709.1 (uncharacterized protein LOC111493291 isoform X1 [Cucurbita maxima]) HSP 1 Score: 283 bits (725), Expect = 9.48e-95 Identity = 161/203 (79.31%), Postives = 166/203 (81.77%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. NCBI nr
Match: KAG6601582.1 (hypothetical protein SDJN03_06815, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 281 bits (718), Expect = 1.10e-93 Identity = 159/203 (78.33%), Postives = 166/203 (81.77%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. NCBI nr
Match: XP_022956625.1 (uncharacterized protein LOC111458301 isoform X2 [Cucurbita moschata]) HSP 1 Score: 278 bits (711), Expect = 1.28e-92 Identity = 158/203 (77.83%), Postives = 165/203 (81.28%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. NCBI nr
Match: KAG7032346.1 (yuiD [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 273 bits (698), Expect = 6.85e-91 Identity = 155/203 (76.35%), Postives = 158/203 (77.83%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. ExPASy TrEMBL
Match: A0A6J1KF17 (uncharacterized protein LOC111493291 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493291 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 4.59e-95 Identity = 161/203 (79.31%), Postives = 166/203 (81.77%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. ExPASy TrEMBL
Match: A0A6J1GYA4 (uncharacterized protein LOC111458301 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458301 PE=4 SV=1) HSP 1 Score: 278 bits (711), Expect = 6.22e-93 Identity = 158/203 (77.83%), Postives = 165/203 (81.28%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. ExPASy TrEMBL
Match: A0A0A0KS18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G590110 PE=4 SV=1) HSP 1 Score: 258 bits (660), Expect = 3.61e-85 Identity = 146/202 (72.28%), Postives = 159/202 (78.71%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. ExPASy TrEMBL
Match: A0A1S3BEW6 (uncharacterized membrane protein YuiD isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488911 PE=4 SV=1) HSP 1 Score: 258 bits (659), Expect = 5.12e-85 Identity = 145/202 (71.78%), Postives = 159/202 (78.71%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. ExPASy TrEMBL
Match: A0A5A7SSY2 (Putative membrane protein YuiD isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002070 PE=4 SV=1) HSP 1 Score: 256 bits (653), Expect = 1.61e-83 Identity = 144/201 (71.64%), Postives = 158/201 (78.61%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. TAIR 10
Match: AT1G67600.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 193.4 bits (490), Expect = 1.8e-49 Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. TAIR 10
Match: AT1G24350.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 188.0 bits (476), Expect = 7.7e-48 Identity = 105/169 (62.13%), Postives = 120/169 (71.01%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. TAIR 10
Match: AT1G24350.3 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44 Identity = 105/187 (56.15%), Postives = 120/187 (64.17%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. TAIR 10
Match: AT1G24350.2 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 169.9 bits (429), Expect = 2.2e-42 Identity = 95/153 (62.09%), Postives = 108/153 (70.59%), Query Frame = 0
BLAST of Cp4.1LG01g16040 vs. TAIR 10
Match: AT3G21610.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein ) HSP 1 Score: 151.8 bits (382), Expect = 6.1e-37 Identity = 84/162 (51.85%), Postives = 105/162 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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