Cp4.1LG01g15140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g15140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionserine/arginine-rich splicing factor RSZ21-like
LocationCp4.1LG01: 9104661 .. 9109036 (+)
RNA-Seq ExpressionCp4.1LG01g15140
SyntenyCp4.1LG01g15140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCACATATCACTTGACTGACAACTTCTGTAGACTTCCGAGCATCGGAGCTCCGCGACTACGGGCAGCACCGTTTTCCAACCTTATCGTCGGCTGATCTGTTCGTACTTTTTGACGATTCCGAGAGATCTTTTTCTTGGTAGGCTTCAGCTTCGCGATCAATACGTGAATAACCCTAATTCTTCCTCATTTTTTGTTTATTAATCCTTGAACTAGCGGTTCGATTTTGTTTTTCTCCCTCCATTTTTGATGATCTACTGCAAATGTTTCGTTTGTGAACTTTGTGTGTGTGGATTTTTACCCCATGTAGACTTATATAGGTGTTGCAGCTTTCGCATCCTGGGGTTGTGAGGGTTGTTTTTCCATTCCAGTTTGTTGTTTAGATTACATTCTAACTCCTGTTCTGTACGTATTTTCTTGTTTATTTAGGAATGATTCGTTTTCTCAAACTAACATATTTTCCTGGGATTGCTTACTCTTACTATTTTCAGGAGCTTCTGGGCTCCTTCGATACAATGACTCGAGTTTACATTGGTAATCTGGATCCACGTGTTACGGAGAGGGAGCTTGAAGATGAATTCCGAATGTTCGGTGTTCTGAGGAGGTGATTTGAGTTTGAAATTTTTGTATTGAGGCATTCTTTTCATGTATTTCTTAAATTAACATATTTTAGATGCATGATATGGTATCTACCGAATGGTCCGAAATGTGGAATTTTAGGCTCCTGGGTTCTTTCAGTGGCAGTGTGTTGGGTTCCTTCAGTATATGCCCTAGATTTTTTACAGCACATAAATATCTATCCATCCCGTTGTACCTAGCCGAAGCTAGATATTTCAGCACTCTGCAGGGGAAGAAAAAAGAAACAGAACAGAAAAAACCCTTACTTAGCAATGAGTGCTCGCTAGTTGGACTCTGCTTTATGCATAAGTCCATATCTTCCTTATCGTTAACTTTTTGTTTAAGAACTGAACCCAATGCACAGACTCTCTTAGATATGTCCTCTGACGTTTTCTGATGTCTATCCTTGAGATTAGTTGGCTCAATGTGCATGGCTCATATCTTAGACTCGTTTGTACCTCGACTGAAAGCCAGAGTAGTATTTCTGTGGTCTAGATTTTGCTTCAAGGACGTTTATGCCTCAATTGCATATCAGTTATTAAGATGAGATCGCTTACACCATGCATCCTCCATTTGCAATAATTTGAAACAATATATCTGTTTCTTTGTTCCTTTGTATTAAAATGCGTTCTGAATATTTGTATTTGAACAAAACAATACAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTGGATGGTCAGTTTTAAATAAAAGATCTTTTTTTTTTGTCTTGTAGGTATCAAATTTTGCATTGCATTACATTCCTTCTATAAAATGTTAATTTCTTTTGTATATGTGTGTGTGTGTGCATGCTTTTCTCGACTACTAGTGAGTTTGACATGTGCGGGAGCACTCTCCTTGCCTTTATCTGTAATCTAGTTTTCATTACTGCAGTCAATCAGAAATTTATTATTGCTCTAGCTTAATATCATCTTTGGTCTGCTAAATTGAACTAAATCGTGGAAATTTACCTTATTCTTTAAGACCACCTTATTGAAAAAGAGGGTAATGAATGGCCCAATCCTCTTCAATATGCTTCAAAGATGTGATTTTGGGAATTATCATGATTCTAAGATATAGAAACTTTGAGGGCTATTGGAAGCCATTTTTATCAACCATATTCTTATGCCCTCTTTGATGTTGATTCTATCTTGAACCAGCATCTAATCTCTTTGTCTGTGGAAGGCTAAAGTGCCTAAGAAGACTTAACAGCTTCAGTCTTCATGTGGAGTTTATTCCATAATGAGCTCAATACTTGCAATAAGCGTTAAAACCACTTCCATGATCCTAGCCTCTCATCTAGCTCCTATTGTGCATTATATGCCAGCATGATGAAGAGAATCAATTTAATCTCTTTTTCTAGACGTTCAGCTCCCTTTTTTCAATTTTTTTTTTCTCCATAAATTGTTCACTGTTTTTGGCATCTCTTGGTGCTTGCCCAAGTGTCACAAGTTGGTAGTCTAGTCTTACAACTCCGTTGTGATCATCCTTTCATAGGTAAAATAAAGAGCTGTGGAATAATTCAGATATTTCCATGTAATGGATAATGGTTTGAGAGAAGTCAAATGAATTTTCATGATGCTTTCTCTATGGTGGTCTTGTTGGACCTTGTGAACTTTTTTCCTATATGGTGCACTAGATCAATATTTTGGCTTTGCAATTAAAGTCTATCCTTAATCCGGGATCCTTTTCTATAACTTCCTAGGGCTAATAGGTTGATTCCTCATCCCCCTATTCTTAGTTTCATTGCCTTAAGTTTATCTTATCTTTTATGTGTGATTTTATTGGGTTCTTTTCATAGGGAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGCGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAACCTGGTCATTTTGCTCGTGAGTGTCGTTCACGTGGGGGCTCACGAGGTGCAGGAGGTGGTTTGCGCCGTAGTCCTTCTCCTCGGCGCCGTAGGAGTCCAAGCTATGAAAGATATGGTCGCAGGTGTGTCAAAGCTGTGTGTGTGTTTTTCTTTTAAAACACACCAAGTTATCTAATAGATGTCAATTCAACAGGTGGTTTGGTTTCATATGAACTGAAGAATTTGATGTTCTATCACTCTTTTCCTTTTTCTTGTGTAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACCAAGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGGAGCTACAGCAGATCCCCTCCACCCCGCCATGCTCGTCGTGCTTCACCTTATGCTAATGGGTATGCCTTCTTAGTCATGAGAACTATTCACTACATCTATTAGTTAGTGAAAGGCGAGGGAACTTAATTGCCTTACATAGGTTGTTTTGTGCAACATGGGGTTTGGGGAATCATTGTAGTGCAGTAGAACAAGGTTATCTTGAACAGCAAGATTCCAGGCCGTCGCTAGTATTCTCTCCCATAACTAACTAGGAATTTCTTAATTGTTTTACACCCTCCTGGCGTATGTTTGCTTTAAATTATTTTCTACTACAAATTCTTGTCAATACATACTTGACTGAGCTACATATTCCATAACTTAATACTTTTAGATACAAGTACATCGATCTGATGTTGCATGTTAATCATTATTGCAGAGATTGATGTTGGACTCAAGGCTGGATGCTGTGCTGGTAGAACTTAGATGATGGTGTTTCTGCTATGCTGTAGTTCTAATAGGAATTGTGGAGTGAACCAGAATCATGTAGTTAAGTTCGTCTCTGACAATTGGTTCTCTTTGAAACCTGGATTTGGATGGGTGTCTACGAAGTGTTTTGAGCCACAAAATGGGGTTCGGTCGGGCACCATTTTGTGTTGGCTCCCTTCTGCCCGCTGAAACTCGGAGGTCTCTTTCTTGCTTTTAAAATTATATCTACTACCTAGAGTTTTATATATATATCTATATACCTTTCTATCTATTCATCAATATTTCTTTTTCATTGGATGCCCCTAAAGATCTATCTGTTGGCTGTTTTTTTCCTCTTATGTGTTTGAGGTGTGATTTTCGGCTATATATGGCATCGTTACTCAGCTAACTGCATCTTAGTGCATCACGGTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTTACTACAACTGGTTGCATGCTGTTTGTATTGCACTCAAGGCTGCCCATATAGTGTTAATCCTTTTTAGGTGGTTGAAGAAGATGAAGCTGTTTTTATGCGATTTTTCTGCTAATCATCTTCTCGTCTATCAACGCTTTTCGAGCTTCTATTACATCTGCAAAACTATTGTGAGAGTTTTATAACATCGGCATCTTGTGAGCTTCAACTTGTTTATCGCTCTCCCCAACTACTGCCTTGCCTTGCTCCACCAACCTTCCCTCTTTCACCATTATGCTTCCTTCAATAGCACTTCTCCTTAAGTGAGGCAGCTACTTTCTTGGTCATGGCTCATTAGTTTGTGTGTATTAGCTAGCTAGCTAGGGTCAAGGATGTTGGAACTTTGAATGCTTATTTATATTCCCACTCTTTGATGTTTGTTGTTTGTTCTTTGCATAGGGAAATACATTTAAGGCCCTCCCAATTTCAATTAAGGAACCTTCATTAATCGATTTTATTGTGAGGACGTTTTATCTTCGATTCTCACAAATAATATTC

mRNA sequence

AACTCACATATCACTTGACTGACAACTTCTGTAGACTTCCGAGCATCGGAGCTCCGCGACTACGGGCAGCACCGTTTTCCAACCTTATCGTCGGCTGATCTGTTCGTACTTTTTGACGATTCCGAGAGATCTTTTTCTTGTTTGTTGTTTAGATTACATTCTAACTCCTGTTCTGAGCTTCTGGGCTCCTTCGATACAATGACTCGAGTTTACATTGGTAATCTGGATCCACGTGTTACGGAGAGGGAGCTTGAAGATGAATTCCGAATGTTCGGTGTTCTGAGGAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTGGATGGGAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGCGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAACCTGGTCATTTTGCTCGTGAGTGTCGTTCACGTGGGGGCTCACGAGGTGCAGGAGGTGGTTTGCGCCGTAGTCCTTCTCCTCGGCGCCGTAGGAGTCCAAGCTATGAAAGATATGGTCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACCAAGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGGAGCTACAGCAGATCCCCTCCACCCCGCCATGCTCGTCGTGCTTCACCTTATGCTAATGGGTTGTTTTGTGCAACATGGGGTTTGGGGAATCATTGTAGTGCAGTAGAACAAGAGATTGATGTTGGACTCAAGGCTGGATGCTGTGCTGGTAGAACTTAGATGATGGTGTTTCTGCTATGCTGTAGTTCTAATAGGAATTGTGGAGTGAACCAGAATCATGTAGTTAAGTTCGTCTCTGACAATTGGTTCTCTTTGAAACCTGGATTTGGATGGGTGTCTACGAAGTGTTTTGAGCCACAAAATGGGGTTCGGTCGGGCACCATTTTGTGTTGGCTCCCTTCTGCCCGCTGAAACTCGGAGGTCTCTTTCTTGCTTTTAAAATTATATCTACTACCTAGAGTTTTATATATATATCTATATACCTTTCTATCTATTCATCAATATTTCTTTTTCATTGGATGCCCCTAAAGATCTATCTGTTGGCTGTTTTTTTCCTCTTATGTGTTTGAGCTAACTGCATCTTAGTGCATCACGGTTCTCAATATCTGCTCTGCTCCTCAATCATCTTCTTGTTACTACAACTGGTTGCATGCTGTTTGTATTGCACTCAAGGCTGCCCATATAGTGTTAATCCTTTTTAGGTGGTTGAAGAAGATGAAGCTGTTTTTATGCGATTTTTCTGCTAATCATCTTCTCGTCTATCAACGCTTTTCGAGCTTCTATTACATCTGCAAAACTATTGTGAGAGTTTTATAACATCGGCATCTTGTGAGCTTCAACTTGTTTATCGCTCTCCCCAACTACTGCCTTGCCTTGCTCCACCAACCTTCCCTCTTTCACCATTATGCTTCCTTCAATAGCACTTCTCCTTAAGTGAGGCAGCTACTTTCTTGGTCATGGCTCATTAGTTTGTGTGTATTAGCTAGCTAGCTAGGGTCAAGGATGTTGGAACTTTGAATGCTTATTTATATTCCCACTCTTTGATGTTTGTTGTTTGTTCTTTGCATAGGGAAATACATTTAAGGCCCTCCCAATTTCAATTAAGGAACCTTCATTAATCGATTTTATTGTGAGGACGTTTTATCTTCGATTCTCACAAATAATATTC

Coding sequence (CDS)

ATGACTCGAGTTTACATTGGTAATCTGGATCCACGTGTTACGGAGAGGGAGCTTGAAGATGAATTCCGAATGTTCGGTGTTCTGAGGAGTGTTTGGGTTGCTAGAAGGCCTCCAGGATATGCATTTATTGAGTTTGATGATCGCAGGGATGCTCTAGATGCAATACAAGCATTGGATGGGAAAAATGGTTGGCGTGTGGAGCTTTCTCACAACTCTAAAGGCGGTGGAGGAGGTGGTGGTCGTCGTGGCCGTGGTGGTGGTGGTGGTGGTGGTGATGATTTGAAATGTTATGAATGTGGTGAACCTGGTCATTTTGCTCGTGAGTGTCGTTCACGTGGGGGCTCACGAGGTGCAGGAGGTGGTTTGCGCCGTAGTCCTTCTCCTCGGCGCCGTAGGAGTCCAAGCTATGAAAGATATGGTCGCAGGAGTAACAGTCCTCGTGGTAAAAGATCCCCACCAAGACGTCGCAGCATTACACCTCCTAAGCGTGGTCGGAGCTACAGCAGATCCCCTCCACCCCGCCATGCTCGTCGTGCTTCACCTTATGCTAATGGGTTGTTTTGTGCAACATGGGGTTTGGGGAATCATTGTAGTGCAGTAGAACAAGAGATTGATGTTGGACTCAAGGCTGGATGCTGTGCTGGTAGAACTTAG

Protein sequence

MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGKNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARRASPYANGLFCATWGLGNHCSAVEQEIDVGLKAGCCAGRT
Homology
[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy Swiss-Prot
Match: O81127 (Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RSZ21 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.8e-66
Identity = 144/199 (72.36%), Postives = 154/199 (77.39%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTERELEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAG 120
           KNGWRVELSH  KGG GGGGGRR      GG +D KCYECGE GHFARECR     RG G
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR------GGIEDSKCYECGELGHFARECR-----RGRG 120

Query: 121 GGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHAR-- 180
              RRSPSPRRRRSP Y  Y RRS SPRG+RSPPRRRS+TPP+RGRSYSRSPP R +R  
Sbjct: 121 SVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRD 180

Query: 181 ----------RASPYANGL 187
                     R SPYANG+
Sbjct: 181 SPRRRDSPYGRRSPYANGV 187

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy Swiss-Prot
Match: O81126 (Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RSZ22 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.3e-60
Identity = 136/192 (70.83%), Postives = 148/192 (77.08%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTERELEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SKGGGGGGGRRGRGG---GGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVE SHN   +GGGG GG RG GG   GG GG DLKCYECGE GHFARECR+RGG+
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120

Query: 121 RGAGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKR-SPPRRRSIT-PPKRGRSYSRSPPP 180
                  R    PR RRSPS   YGRRS SPR +   PPRRRS + PP RGRSYSRSPPP
Sbjct: 121 GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSPPP 180

Query: 181 RHARRASPYANG 186
             AR   PYANG
Sbjct: 181 YRAREEVPYANG 189

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy Swiss-Prot
Match: Q9SJA6 (Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=RSZ22A PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.0e-58
Identity = 132/188 (70.21%), Postives = 145/188 (77.13%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTERELEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ +DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGG--GGGGDDLKCYECGEPGHFARECRSRGGSRGA 120
           KNGWRVE SHN  GGGG GG RG G G  G GG DLKCYECGE GHFARECRSRGGS G 
Sbjct: 61  KNGWRVEQSHNRGGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFARECRSRGGSGGR 120

Query: 121 GGGLRRSPS-PRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHAR 180
                RS S PR R+SP+Y   GRRS SPR +  PP RR  +P  RGR+YSRSPPP  AR
Sbjct: 121 RRSRSRSRSPPRYRKSPTYG--GRRSYSPRARSPPPPRRR-SPSPRGRNYSRSPPPYRAR 180

Query: 181 RASPYANG 186
              PYANG
Sbjct: 181 DEVPYANG 185

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy Swiss-Prot
Match: Q69KL9 (Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ21A PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-52
Identity = 123/189 (65.08%), Postives = 135/189 (71.43%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M RVY+GNLDPRVT RELEDEFR+FGVLRSVWVAR+PPG+AFI+FDDRRDA DAI+ +DG
Sbjct: 1   MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG 120
           KNGWRVELS N+  G GG  R        G  + KCYECGE GHFARECR R GS G G 
Sbjct: 61  KNGWRVELSRNASSGRGGRDRY-------GSSESKCYECGETGHFARECRLRIGSGGLGS 120

Query: 121 GLRRSPSPRRRRSPSYER---YGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHAR 180
           G RRS S  R RSP Y R   YGRRS SP G+   PRRRS++ P R RSYSRSP     R
Sbjct: 121 GRRRSRSRSRSRSPRYRRSPSYGRRSYSPAGR--SPRRRSVS-PARARSYSRSPQYNRGR 179

Query: 181 RASP-YANG 186
             SP Y NG
Sbjct: 181 DESPAYDNG 179

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy Swiss-Prot
Match: Q6K4N0 (Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZP21 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-51
Identity = 121/188 (64.36%), Postives = 137/188 (72.87%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M R+Y+GNLDPRVT  ELEDEFR+FGVLRSVWVAR+PPG+AFI+FDD+RDA DA++ LDG
Sbjct: 1   MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG 120
           KNGWRVELS NS   GG    R R     GG ++KCYECGE GHFARECR R G  G G 
Sbjct: 61  KNGWRVELSRNSSSRGG----RDR----HGGSEMKCYECGETGHFARECRLRIGPGGLGS 120

Query: 121 GLRRSPSPRRRRSPSYER---YGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHAR 180
           G RRS S  R RSP Y +   YGRRS SPR +   PRRRS++ P RGRSYSRSP     R
Sbjct: 121 GKRRSRSRSRSRSPQYRKSPTYGRRSYSPRDR--SPRRRSVS-PVRGRSYSRSP---RGR 174

Query: 181 RASPYANG 186
             SPYA+G
Sbjct: 181 GGSPYADG 174

[Close]
BLAST of Cp4.1LG01g15140 vs. NCBI nr
Match: XP_022956661.1 (serine/arginine-rich splicing factor RSZ21-like [Cucurbita moschata] >XP_023526643.1 serine/arginine-rich splicing factor RSZ21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363 bits (931), Expect = 9.60e-126
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG 120

Query: 121 GLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARRAS 180
           GLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARRAS
Sbjct: 121 GLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARRAS 180

Query: 181 PYANG 185
           PYANG
Sbjct: 181 PYANG 185

[Close]
BLAST of Cp4.1LG01g15140 vs. NCBI nr
Match: TYK15593.1 (serine/arginine-rich splicing factor RSZ21 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 362 bits (930), Expect = 2.77e-125
Identity = 194/219 (88.58%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRG--GGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120
           KNGWRVELSHNSKGGGGGGGRRGRG  GGGGGGDDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPYRHARR 180

Query: 181 ASPYANGLFCATWGLGNHCSAVEQEIDVGLKAGCCAGRT 217
           ASPYANG             A+  +ID G KAGCCAGRT
Sbjct: 181 ASPYANGY------------ALLPKIDAGNKAGCCAGRT 206

[Close]
BLAST of Cp4.1LG01g15140 vs. NCBI nr
Match: XP_023004543.1 (serine/arginine-rich splicing factor RSZ21-like [Cucurbita maxima])

HSP 1 Score: 358 bits (918), Expect = 9.87e-124
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG--DDLKCYECGEPGHFARECRSRGGSRGA 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG  DDLKCYECGEPGHFARECRSRGGSRGA
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180

Query: 181 ASPYANG 185
           ASPYANG
Sbjct: 181 ASPYANG 187

[Close]
BLAST of Cp4.1LG01g15140 vs. NCBI nr
Match: XP_008446226.1 (PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo] >XP_008446227.1 PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo])

HSP 1 Score: 344 bits (883), Expect = 2.06e-118
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRG--GGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120
           KNGWRVELSHNSKGGGGGGGRRGRG  GGGGGGDDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPYRHARR 180

Query: 181 ASPYANG 185
           ASPYANG
Sbjct: 181 ASPYANG 186

[Close]
BLAST of Cp4.1LG01g15140 vs. NCBI nr
Match: XP_011655636.1 (serine/arginine-rich splicing factor RSZ21 [Cucumis sativus] >KAE8648723.1 hypothetical protein Csa_008378 [Cucumis sativus])

HSP 1 Score: 344 bits (882), Expect = 3.03e-118
Identity = 181/188 (96.28%), Postives = 182/188 (96.81%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG---DDLKCYECGEPGHFARECRSRGGSRG 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG   DDLKCYECGEPGHFARECRSRGGSRG
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRG 120

Query: 121 AGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHAR 180
            GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RHAR
Sbjct: 121 VGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPYRHAR 180

Query: 181 RASPYANG 185
           RASPYANG
Sbjct: 181 RASPYANG 187

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy TrEMBL
Match: A0A6J1GX57 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita moschata OX=3662 GN=LOC111458322 PE=4 SV=1)

HSP 1 Score: 363 bits (931), Expect = 4.65e-126
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAGG 120

Query: 121 GLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARRAS 180
           GLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARRAS
Sbjct: 121 GLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARRAS 180

Query: 181 PYANG 185
           PYANG
Sbjct: 181 PYANG 185

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy TrEMBL
Match: A0A5D3CUM7 (Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00890 PE=4 SV=1)

HSP 1 Score: 362 bits (930), Expect = 1.34e-125
Identity = 194/219 (88.58%), Postives = 197/219 (89.95%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRG--GGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120
           KNGWRVELSHNSKGGGGGGGRRGRG  GGGGGGDDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPYRHARR 180

Query: 181 ASPYANGLFCATWGLGNHCSAVEQEIDVGLKAGCCAGRT 217
           ASPYANG             A+  +ID G KAGCCAGRT
Sbjct: 181 ASPYANGY------------ALLPKIDAGNKAGCCAGRT 206

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy TrEMBL
Match: A0A6J1KZV2 (serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=LOC111497790 PE=4 SV=1)

HSP 1 Score: 358 bits (918), Expect = 4.78e-124
Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG--DDLKCYECGEPGHFARECRSRGGSRGA 120
           KNGWRVELSHNSKGGGGGGGRRGRGGGGGGG  DDLKCYECGEPGHFARECRSRGGSRGA
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180

Query: 181 ASPYANG 185
           ASPYANG
Sbjct: 181 ASPYANG 187

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy TrEMBL
Match: A0A1S3BEJ4 (serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC103489020 PE=4 SV=1)

HSP 1 Score: 344 bits (883), Expect = 9.96e-119
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRVTER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRRGRG--GGGGGGDDLKCYECGEPGHFARECRSRGGSRGA 120
           KNGWRVELSHNSKGGGGGGGRRGRG  GGGGGGDDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGRRGRGAGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGV 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RHARR
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPYRHARR 180

Query: 181 ASPYANG 185
           ASPYANG
Sbjct: 181 ASPYANG 186

[Close]
BLAST of Cp4.1LG01g15140 vs. ExPASy TrEMBL
Match: A0A6J1G1N9 (serine/arginine-rich splicing factor RSZ21-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449845 PE=4 SV=1)

HSP 1 Score: 333 bits (855), Expect = 1.84e-114
Identity = 178/187 (95.19%), Postives = 180/187 (96.26%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVYIGNLDPRV+ER+LEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG
Sbjct: 1   MTRVYIGNLDPRVSERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 61  KNGWRVELSHNSKGGGGGGGRR-GRGGGGGGG-DDLKCYECGEPGHFARECRSRGGSRGA 120
           KNGWRVELSHNSKGGGGGGG R GRGGGGGGG DDLKCYECGEPGHFARECRSRGGSRG 
Sbjct: 61  KNGWRVELSHNSKGGGGGGGGRCGRGGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGI 120

Query: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHARR 180
           GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP RRRSITPPKRGRSYSRSPP RHAR 
Sbjct: 121 GGGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSP-RRRSITPPKRGRSYSRSPPLRHARH 180

Query: 181 ASPYANG 185
           ASPYANG
Sbjct: 181 ASPYANG 186

[Close]
BLAST of Cp4.1LG01g15140 vs. TAIR 10
Match: AT1G23860.1 (RS-containing zinc finger protein 21 )

HSP 1 Score: 252.7 bits (644), Expect = 2.7e-67
Identity = 144/199 (72.36%), Postives = 154/199 (77.39%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTERELEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAG 120
           KNGWRVELSH  KGG GGGGGRR      GG +D KCYECGE GHFARECR     RG G
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR------GGIEDSKCYECGELGHFARECR-----RGRG 120

Query: 121 GGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHAR-- 180
              RRSPSPRRRRSP Y  Y RRS SPRG+RSPPRRRS+TPP+RGRSYSRSPP R +R  
Sbjct: 121 SVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRD 180

Query: 181 ----------RASPYANGL 187
                     R SPYANG+
Sbjct: 181 SPRRRDSPYGRRSPYANGV 187

[Close]
BLAST of Cp4.1LG01g15140 vs. TAIR 10
Match: AT1G23860.2 (RS-containing zinc finger protein 21 )

HSP 1 Score: 252.7 bits (644), Expect = 2.7e-67
Identity = 144/199 (72.36%), Postives = 154/199 (77.39%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTERELEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAG 120
           KNGWRVELSH  KGG GGGGGRR      GG +D KCYECGE GHFARECR     RG G
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR------GGIEDSKCYECGELGHFARECR-----RGRG 120

Query: 121 GGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHAR-- 180
              RRSPSPRRRRSP Y  Y RRS SPRG+RSPPRRRS+TPP+RGRSYSRSPP R +R  
Sbjct: 121 SVRRRSPSPRRRRSPDY-GYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRD 180

Query: 181 ----------RASPYANGL 187
                     R SPYANG+
Sbjct: 181 SPRRRDSPYGRRSPYANGV 187

[Close]
BLAST of Cp4.1LG01g15140 vs. TAIR 10
Match: AT1G23860.4 (RS-containing zinc finger protein 21 )

HSP 1 Score: 245.7 bits (626), Expect = 3.3e-65
Identity = 141/199 (70.85%), Postives = 151/199 (75.88%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           MTRVY+GNLDPRVTERELEDEF+ FGVLR+VWVARRPPGYAF+EFDD RDALDAI ALD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSKGG-GGGGGRRGRGGGGGGGDDLKCYECGEPGHFARECRSRGGSRGAG 120
           KNGWRVELSH  KGG GGGGGRR      GG +D KCYECGE GHFARECR     RG G
Sbjct: 61  KNGWRVELSHKDKGGRGGGGGRR------GGIEDSKCYECGELGHFARECR-----RGRG 120

Query: 121 GGLRRSPSPRRRRSPSYERYGRRSNSPRGKRSPPRRRSITPPKRGRSYSRSPPPRHAR-- 180
              RRSPSPRRRRSP Y      S SPRG+RSPPRRRS+TPP+RGRSYSRSPP R +R  
Sbjct: 121 SVRRRSPSPRRRRSPDY-----GSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRD 180

Query: 181 ----------RASPYANGL 187
                     R SPYANG+
Sbjct: 181 SPRRRDSPYGRRSPYANGV 183

[Close]
BLAST of Cp4.1LG01g15140 vs. TAIR 10
Match: AT4G31580.1 (serine/arginine-rich 22 )

HSP 1 Score: 232.3 bits (591), Expect = 3.8e-61
Identity = 136/192 (70.83%), Postives = 148/192 (77.08%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTERELEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SKGGGGGGGRRGRGG---GGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVE SHN   +GGGG GG RG GG   GG GG DLKCYECGE GHFARECR+RGG+
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120

Query: 121 RGAGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKR-SPPRRRSIT-PPKRGRSYSRSPPP 180
                  R    PR RRSPS   YGRRS SPR +   PPRRRS + PP RGRSYSRSPPP
Sbjct: 121 GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSPPP 180

Query: 181 RHARRASPYANG 186
             AR   PYANG
Sbjct: 181 YRAREEVPYANG 189

[Close]
BLAST of Cp4.1LG01g15140 vs. TAIR 10
Match: AT4G31580.2 (serine/arginine-rich 22 )

HSP 1 Score: 232.3 bits (591), Expect = 3.8e-61
Identity = 136/192 (70.83%), Postives = 148/192 (77.08%), Query Frame = 0 

Query: 1   MTRVYIGNLDPRVTERELEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60
           M+RVY+GNLDPRVTERELEDEFR FGV+RSVWVARRPPGYAF++F+D RDA DAI+ALDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SKGGGGGGGRRGRGG---GGGGGDDLKCYECGEPGHFARECRSRGGS 120
           KNGWRVE SHN   +GGGG GG RG GG   GG GG DLKCYECGE GHFARECR+RGG+
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNRGGT 120

Query: 121 RGAGGGLRRSPSPRRRRSPSYERYGRRSNSPRGKR-SPPRRRSIT-PPKRGRSYSRSPPP 180
                  R    PR RRSPS   YGRRS SPR +   PPRRRS + PP RGRSYSRSPPP
Sbjct: 121 GRRRSKSRSRTPPRYRRSPS---YGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSPPP 180

Query: 181 RHARRASPYANG 186
             AR   PYANG
Sbjct: 181 YRAREEVPYANG 189

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g15140 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O811273.8e-6672.36Serine/arginine-rich splicing factor RSZ21 OS=Arabidopsis thaliana OX=3702 GN=RS... [more]
O811265.3e-6070.83Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RS... [more]
Q9SJA61.0e-5870.21Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q69KL94.1e-5265.08Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=3... [more]
Q6K4N01.2e-5164.36Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39... [more]
BLAST of Cp4.1LG01g15140 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956661.19.60e-126100.00serine/arginine-rich splicing factor RSZ21-like [Cucurbita moschata] >XP_0235266... [more]
TYK15593.12.77e-12588.58serine/arginine-rich splicing factor RSZ21 isoform X1 [Cucumis melo var. makuwa][more]
XP_023004543.19.87e-12498.93serine/arginine-rich splicing factor RSZ21-like [Cucurbita maxima][more]
XP_008446226.12.06e-11896.79PREDICTED: serine/arginine-rich splicing factor RSZ21 [Cucumis melo] >XP_0084462... [more]
XP_011655636.13.03e-11896.28serine/arginine-rich splicing factor RSZ21 [Cucumis sativus] >KAE8648723.1 hypot... [more]
BLAST of Cp4.1LG01g15140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GX574.65e-126100.00serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A5D3CUM71.34e-12588.58Serine/arginine-rich splicing factor RSZ21 isoform X1 OS=Cucumis melo var. makuw... [more]
A0A6J1KZV24.78e-12498.93serine/arginine-rich splicing factor RSZ21-like OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3BEJ49.96e-11996.79serine/arginine-rich splicing factor RSZ21 OS=Cucumis melo OX=3656 GN=LOC1034890... [more]
A0A6J1G1N91.84e-11495.19serine/arginine-rich splicing factor RSZ21-like isoform X1 OS=Cucurbita moschata... [more]
BLAST of Cp4.1LG01g15140 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G23860.12.7e-6772.36RS-containing zinc finger protein 21 [more]
AT1G23860.22.7e-6772.36RS-containing zinc finger protein 21 [more]
AT1G23860.43.3e-6570.85RS-containing zinc finger protein 21 [more]
AT4G31580.13.8e-6170.83serine/arginine-rich 22 [more]
AT4G31580.23.8e-6170.83serine/arginine-rich 22 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 3..69
e-value: 9.9E-18
score: 74.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 4..61
e-value: 3.5E-16
score: 58.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 2..73
score: 16.124914
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 95..111
e-value: 1.9E-5
score: 34.1
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 95..110
e-value: 9.7E-8
score: 31.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 95..111
score: 11.037273
NoneNo IPR availableGENE3D4.10.60.10coord: 91..138
e-value: 1.4E-7
score: 33.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..144
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 2..184
NoneNo IPR availablePANTHERPTHR23147:SF164SERINE/ARGININE-RICH SPLICING FACTOR RSZ21A-LIKE ISOFORM X1coord: 2..184
NoneNo IPR availableCDDcd12373RRM_SRSF3_likecoord: 3..71
e-value: 6.68177E-36
score: 119.262
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..90
e-value: 2.5E-19
score: 71.6
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 85..112
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 2..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g15140.1Cp4.1LG01g15140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding