Cp4.1LG01g15110 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g15110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionAnnexin
LocationCp4.1LG01: 7260508 .. 7261741 (+)
RNA-Seq ExpressionCp4.1LG01g15110
SyntenyCp4.1LG01g15110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATCTCATGTATGCATATACTCATAAAGGTCAGGAAATACCGAAACAAATGCCTTCTTTTTTCGACAGTATGAAAGCAACGAACGTCCCGAAAATGAAAGCAACGAACGTCCCGAAAGGGTAAGTAAATGGTCGTTAAAAGTATAGGTGGTAGCTACTAATACATATCCTAAGCAGAAAAAGGTGGTGAGATTACCTACTCACTCCCAAACGCCCTTAGCCACCTGAGAGGTCAAAAAACCATGAATTTTAGTTAGCAATCACGCAGCTTTAGGCACTATAAAATGGGATGAGTATGGGCAACACTGAGTAACTCATCCTAAAAGCCTTCTTCACCAAAATTCTCTCCTCTTGCAATGAAGACTGTTTCCATGCTCCTCTGCTTCCTTTTGCTTGCCAACCTCTGCTATGCAGCAGAGCAAGAAATGGGTAAGTTGGAGGCCGCCCAAGGTACCTTCACCAACTTTTTAGGCTCATTTTGGGTCATTTTCAGGCTAAAAAATGCTTGTTGTTTTGATCATGTCTGTCTTCATTTTATGCAGGCACCAAAGGAGAAGAAGGGGAAGAGACCGAAGCAGAGAAATTGAAGCTTATTCCACACCACATACCATTCTACAAGAAGCCGCTTTTGAAGGCAGCTCCAAAGAAGCCAATTCCGCATCACCCAATCCTCAAGAAGCCATTTCCAAAGCCTCGTTATCCGCCAGTGTTCCCCACCCATCCTTGAAACAAACTATGCTCATGAGCCCTTATAATGCCATGGAATAATAAGCTTTACTGCATAGTTAAGTTTTAGAAACCAAGAGTTTATTTTGGAGTCAGCTTCCTTTGCTACTACTACTCTTCACTGTTCTTGTTCTTGTTGTGTTCAATCAAATAATAAACTATCGCTTTTTGTTTCATCATGTATGCCTTTTCATCTGTTCCCTAACCCTATAAGTTAACATGAAATAGGCTAAATTTCCGACCAACCCAACTCCCAATCACTCCAAAAATTTGGTTGGACTACGAGCTTATTTGGATTGAGTTTGATTCAAATAAATGAAGATTCTGTAGATTGGGTTGATTCCTGTCCGCTCTCCTAAAACTAGATTGGGCTGAACAGAACCAACTCGAATTTATTGTTAATTTTAAAAGATCTATTGAGTTGTATACATTGACATTGAGTTGTACTTCTGACCCGAACAACTCGAACCAACCCAACACAAAAATGTTATGGTTGGGTTCATTATTT

mRNA sequence

GAATCTCATGTATGCATATACTCATAAAGGTCAGGAAATACCGAAACAAATGCCTTCTTTTTTCGACAGTATGAAAGCAACGAACGTCCCGAAAATGAAAGCAACGAACGTCCCGAAAGGGTAAGTAAATGGTCGTTAAAAGTATAGGTGGTAGCTACTAATACATATCCTAAGCAGAAAAAGGTGGTGAGATTACCTACTCACTCCCAAACGCCCTTAGCCACCTGAGAGGTCAAAAAACCATGAATTTTAGTTAGCAATCACGCAGCTTTAGGCACTATAAAATGGGATGAGTATGGGCAACACTGAGTAACTCATCCTAAAAGCCTTCTTCACCAAAATTCTCTCCTCTTGCAATGAAGACTGTTTCCATGCTCCTCTGCTTCCTTTTGCTTGCCAACCTCTGCTATGCAGCAGAGCAAGAAATGGGTAAGTTGGAGGCCGCCCAAGGCACCAAAGGAGAAGAAGGGGAAGAGACCGAAGCAGAGAAATTGAAGCTTATTCCACACCACATACCATTCTACAAGAAGCCGCTTTTGAAGGCAGCTCCAAAGAAGCCAATTCCGCATCACCCAATCCTCAAGAAGCCATTTCCAAAGCCTCGTTATCCGCCAGTGTTCCCCACCCATCCTTGAAACAAACTATGCTCATGAGCCCTTATAATGCCATGGAATAATAAGCTTTACTGCATAGTTAAGTTTTAGAAACCAAGAGTTTATTTTGGAGTCAGCTTCCTTTGCTACTACTACTCTTCACTGTTCTTGTTCTTGTTGTGTTCAATCAAATAATAAACTATCGCTTTTTGTTTCATCATGTATGCCTTTTCATCTGTTCCCTAACCCTATAAGTTAACATGAAATAGGCTAAATTTCCGACCAACCCAACTCCCAATCACTCCAAAAATTTGGTTGGACTACGAGCTTATTTGGATTGAGTTTGATTCAAATAAATGAAGATTCTGTAGATTGGGTTGATTCCTGTCCGCTCTCCTAAAACTAGATTGGGCTGAACAGAACCAACTCGAATTTATTGTTAATTTTAAAAGATCTATTGAGTTGTATACATTGACATTGAGTTGTACTTCTGACCCGAACAACTCGAACCAACCCAACACAAAAATGTTATGGTTGGGTTCATTATTT

Coding sequence (CDS)

ATGAAGACTGTTTCCATGCTCCTCTGCTTCCTTTTGCTTGCCAACCTCTGCTATGCAGCAGAGCAAGAAATGGGTAAGTTGGAGGCCGCCCAAGGCACCAAAGGAGAAGAAGGGGAAGAGACCGAAGCAGAGAAATTGAAGCTTATTCCACACCACATACCATTCTACAAGAAGCCGCTTTTGAAGGCAGCTCCAAAGAAGCCAATTCCGCATCACCCAATCCTCAAGAAGCCATTTCCAAAGCCTCGTTATCCGCCAGTGTTCCCCACCCATCCTTGA

Protein sequence

MKTVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKGEEGEETEAEKLKLIPHHIPFYKKPLLKAAPKKPIPHHPILKKPFPKPRYPPVFPTHP
Homology
BLAST of Cp4.1LG01g15110 vs. NCBI nr
Match: KAG6601142.1 (hypothetical protein SDJN03_06375, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031941.1 hypothetical protein SDJN02_05983 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181 bits (460), Expect = 1.69e-57
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MKTVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKGEEGEETEAEKLKLIPHHIPFYKKPL 60
          MKTVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKGEEGEETEAEKLKLIPHHIPFYKKPL
Sbjct: 1  MKTVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKGEEGEETEAEKLKLIPHHIPFYKKPL 60

Query: 61 LKAAPKKPIPHHPILKKPFPKPRYPPVFPTHP 92
          LKAAPKKPIPHHPILKKPFPKPRYPPVFPTHP
Sbjct: 61 LKAAPKKPIPHHPILKKPFPKPRYPPVFPTHP 92

BLAST of Cp4.1LG01g15110 vs. NCBI nr
Match: XP_022138883.1 (uncharacterized protein LOC111009954 [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 1.18e-16
Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 0

Query: 3   TVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKG--EEGEETEAEKLKLIPHHI-PFYKKP 62
           ++ +LL  LLL N+C AAE+ + + +  Q      + GE  + EK + + HH  P YKKP
Sbjct: 37  SLGILLSLLLLVNVCNAAEKNVAEFQPGQDADDITKNGEAVQGEKFRFLSHHNKPHYKKP 96

Query: 63  LLKAAP----KKPIPHHPILKKPFPKPRYPPVFPTHP 92
             +  P    KKPIPHHPILKKP PKP +PP FPTHP
Sbjct: 97  FFQQIPHPIVKKPIPHHPILKKPLPKPHFPPFFPTHP 133

BLAST of Cp4.1LG01g15110 vs. NCBI nr
Match: KAG6601141.1 (hypothetical protein SDJN03_06374, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031940.1 hypothetical protein SDJN02_05982, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.4 bits (189), Expect = 6.19e-16
Identity = 51/116 (43.97%), Postives = 62/116 (53.45%), Query Frame = 0

Query: 1   MKTVSM----LLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHI 60
           MKT S+    +L  LL  N C+A E+ + +L +AQG  G   + GEE + EK   + HH 
Sbjct: 1   MKTASIFLGIILSLLLFVNFCFAEEENVAELHSAQGAAGVAAKNGEEDQEEKFMFLHHHK 60

Query: 61  PFYKKPLLKAAP-----------------KKPIPHHPILKKPFPKPRYPPVFPTHP 92
           P+ KKP LK  P                 KKPIP HP LKKP PKP  PPVF THP
Sbjct: 61  PYLKKPFLKPIPYKHPFLKKPIPVHHPFLKKPIPIHPFLKKPVPKPLNPPVFATHP 116

BLAST of Cp4.1LG01g15110 vs. NCBI nr
Match: KAE8648861.1 (hypothetical protein Csa_008879 [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 2.17e-15
Identity = 45/84 (53.57%), Postives = 53/84 (63.10%), Query Frame = 0

Query: 12  LLANLCYAAEQEMGKLEAAQG---TKGEEGEETEAEKLKLIPHHIPFYKKPLLKAAPKKP 71
           LL N CYAAE+       AQG   TK   GEE + EK K +P HIPFYKKP+ K  P++P
Sbjct: 77  LLLNFCYAAEENEDAFLPAQGAGITKN--GEEAKEEKFKFLPDHIPFYKKPIFKTIPRQP 136

Query: 72  IPHHPILKKPFPKPRYPPVFPTHP 92
                I+KKPFPKP  PPV P+HP
Sbjct: 137 -----IIKKPFPKPYRPPVLPSHP 153

BLAST of Cp4.1LG01g15110 vs. NCBI nr
Match: XP_038893221.1 (uncharacterized protein LOC120082072 [Benincasa hispida])

HSP 1 Score: 73.6 bits (179), Expect = 2.52e-14
Identity = 46/115 (40.00%), Postives = 59/115 (51.30%), Query Frame = 0

Query: 7   LLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHIPFYKKPLLKA 66
           +L  LL  N CYAAE+ + + ++ +G  G   + G E + EK K + HH P++KKP LK 
Sbjct: 11  ILSLLLFVNFCYAAEESVTEFQSGKGAAGVTAKNGGEEQEEKFKFLHHHKPYFKKPFLKP 70

Query: 67  AP--------------------------KKPIPHHPILKKPFPKPRYPPVFPTHP 92
            P                          KKPIP HP LKKPFPKP  PPVF +HP
Sbjct: 71  VPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPFPKPIKPPVFHSHP 125

BLAST of Cp4.1LG01g15110 vs. ExPASy TrEMBL
Match: A0A6J1CED0 (uncharacterized protein LOC111009954 OS=Momordica charantia OX=3673 GN=LOC111009954 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.72e-17
Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 0

Query: 3   TVSMLLCFLLLANLCYAAEQEMGKLEAAQGTKG--EEGEETEAEKLKLIPHHI-PFYKKP 62
           ++ +LL  LLL N+C AAE+ + + +  Q      + GE  + EK + + HH  P YKKP
Sbjct: 37  SLGILLSLLLLVNVCNAAEKNVAEFQPGQDADDITKNGEAVQGEKFRFLSHHNKPHYKKP 96

Query: 63  LLKAAP----KKPIPHHPILKKPFPKPRYPPVFPTHP 92
             +  P    KKPIPHHPILKKP PKP +PP FPTHP
Sbjct: 97  FFQQIPHPIVKKPIPHHPILKKPLPKPHFPPFFPTHP 133

BLAST of Cp4.1LG01g15110 vs. ExPASy TrEMBL
Match: A0A0A0KRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.88e-16
Identity = 45/84 (53.57%), Postives = 53/84 (63.10%), Query Frame = 0

Query: 12 LLANLCYAAEQEMGKLEAAQG---TKGEEGEETEAEKLKLIPHHIPFYKKPLLKAAPKKP 71
          LL N CYAAE+       AQG   TK   GEE + EK K +P HIPFYKKP+ K  P++P
Sbjct: 9  LLLNFCYAAEENEDAFLPAQGAGITKN--GEEAKEEKFKFLPDHIPFYKKPIFKTIPRQP 68

Query: 72 IPHHPILKKPFPKPRYPPVFPTHP 92
               I+KKPFPKP  PPV P+HP
Sbjct: 69 -----IIKKPFPKPYRPPVLPSHP 85

BLAST of Cp4.1LG01g15110 vs. ExPASy TrEMBL
Match: A0A5D3CG71 (Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002960 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.05e-13
Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 0

Query: 7  LLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHIPFYKKPLLKA 66
          LL FLLL N CYAAE+ + + +  +G  G   + GEE + EK K + HH P+YKKP LK 
Sbjct: 11 LLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPYYKKPFLKP 70

Query: 67 AP------KKPIPHHPILKKPFP 80
           P      KKPIP HP  KKP P
Sbjct: 71 IPYKHPFLKKPIPVHPFHKKPIP 93

BLAST of Cp4.1LG01g15110 vs. ExPASy TrEMBL
Match: A0A1S3BG81 (proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC103489493 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.05e-13
Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 0

Query: 7  LLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHIPFYKKPLLKA 66
          LL FLLL N CYAAE+ + + +  +G  G   + GEE + EK K + HH P+YKKP LK 
Sbjct: 11 LLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPYYKKPFLKP 70

Query: 67 AP------KKPIPHHPILKKPFP 80
           P      KKPIP HP  KKP P
Sbjct: 71 IPYKHPFLKKPIPVHPFHKKPIP 93

BLAST of Cp4.1LG01g15110 vs. ExPASy TrEMBL
Match: A0A0A0KWW0 (ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.31e-13
Identity = 51/109 (46.79%), Postives = 61/109 (55.96%), Query Frame = 0

Query: 7   LLCFLLLANLCYAAEQEMGKLEAAQGTKG---EEGEETEAEKLKLIPHHIPFYKKPLLKA 66
           LL FLLL N CYAAE+ + + ++ +G  G   + GEE E EK K + HH P+YKKP LK 
Sbjct: 11  LLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEE-EDEKFKFLLHHKPYYKKPFLKP 70

Query: 67  AP------KKPIPHHPILKKP-------------FPKP-RYPPVFPTHP 92
            P      KKPIP HP  KKP             F KP  +PPVF THP
Sbjct: 71  IPYKHPFLKKPIPVHPFHKKPIVFEKKPLPVHPFFKKPIDHPPVFHTHP 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6601142.11.69e-57100.00hypothetical protein SDJN03_06375, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022138883.11.18e-1647.42uncharacterized protein LOC111009954 [Momordica charantia][more]
KAG6601141.16.19e-1643.97hypothetical protein SDJN03_06374, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8648861.12.17e-1553.57hypothetical protein Csa_008879 [Cucumis sativus][more]
XP_038893221.12.52e-1440.00uncharacterized protein LOC120082072 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1CED05.72e-1747.42uncharacterized protein LOC111009954 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A0A0KRM71.88e-1653.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1[more]
A0A5D3CG711.05e-1349.40Annexin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002960 PE=4 ... [more]
A0A1S3BG811.05e-1349.40proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A0A0KWW03.31e-1346.79ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g15110.1Cp4.1LG01g15110.1mRNA