Cp4.1LG01g13750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g13750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	Cp4.1LG01: 8119732 .. 8121180 (+)
RNA-Seq Expression	Cp4.1LG01g13750
Synteny	Cp4.1LG01g13750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATGAGTATCAGTATGAGAGTATCAGAATCAGATAAGATACATCCCACATGGGGAAATATTTGAATTAAAAAAATATGTTATAAAAGATGGAGAGAGAATTGAGGGAAATTTCAGGGGGGATGAACTACTAAAGGGAAAACACGGTCCAGGGTCTCATGTGAACCCCATCAACTTGTTCGCCCCCACTTCTCCCTTCCCCCTACAGTTGACCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGTCCACCCTATAAATCCACCCTTCCCCCCAACGCCCCATTCCACTTCATTCCCATTCTCCCCTTTTACTTTTCTCTCCTTCAGTTTCCCATGGACGGGATTTGCATTGACCGAACCACTTCCACTGAATCCCAATCCACAAATTTCCCCCTCCTCAAATCTCCACCGCCGGAGACTAGTCTCTGCCGCGTCGGGAGTGGCTTCACTAGTGTCGTTCTCGACTCTGACTCATGCGGCGTGGAGGCAGAGTCACGCAAATTGCCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAACGGCCGCTGGGGCGCACAGATTTACGAGAAGCATCAAAGAGTATGGTTGGGGACTTTCAACGAAGAGGAAGAAGCAGCACGTGCATACGATGTCGCTGCCCAACGCTTCCGCGGCCGTGACGCTGTCACCAATTTTAAAGATGAAGACAACGACGACGACGTATCGGCCTTCCTCAACTCCCATTCCAAAGCAGAGATCGTGGACATGCTACGTAAGCACACTTACCTACACGAGCTCCATCAAAGCAAACGAAACGCCGGGTTATCCGGTTTAGATCGCAAACATAACCGTTCCTTATCCGGGTTGGATTCGGAGGCTCGCGAACTTCTATTCGAAAAAGCCGTAACCCCAAGCGATGTAGGAAAATTGAACCGTCTCGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCAAAAGGTCTGTTGTTGAACTTCGAGGACGGAGGAGGCAAAGTGTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAAAGCTACGTGCTAACCAAAGGGTGGAGCCGGTTCGTGAAAGAAAAGAATCTGAAACCCGGTGACATTGTGAGCTTCCTCAAATCTCCCGGACAGGACAAACAGCTGTACATCGAATGGAAGTCCAGAAAGGCGTCGCCCACAACCGACCCCAACATCAACCCGGTTCACATCGTCCGACTCTTCGGAGTTGACATCGTCAAAGCTTCTTCGCCAAACACTGGGTGCGGCGAGAAGAGGAGAGAATTGGAATTTCTCGCTTTTCAATGTACCAAAAAACAAAGGATAGTCGGAGCATTGTAA

mRNA sequence

ATGAATGGAGAGAGAATTGAGGGAAATTTCAGGGGGGATGAACTACTAAAGGGAAAACACGGTCCAGGGTCTCATACTAGTCTCTGCCGCGTCGGGAGTGGCTTCACTAGTGTCGTTCTCGACTCTGACTCATGCGGCGTGGAGGCAGAGTCACGCAAATTGCCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAACGGCCGCTGGGGCGCACAGATTTACGAGAAGCATCAAAGAGTATGGTTGGGGACTTTCAACGAAGAGGAAGAAGCAGCACGTGCATACGATGTCGCTGCCCAACGCTTCCGCGGCCGTGACGCTGTCACCAATTTTAAAGATGAAGACAACGACGACGACGTATCGGCCTTCCTCAACTCCCATTCCAAAGCAGAGATCGTGGACATGCTACGTAAGCACACTTACCTACACGAGCTCCATCAAAGCAAACGAAACGCCGGGTTATCCGGTTTAGATCGCAAACATAACCGTTCCTTATCCGGGTTGGATTCGGAGGCTCGCGAACTTCTATTCGAAAAAGCCGTAACCCCAAGCGATGTAGGAAAATTGAACCGTCTCGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCAAAAGGTCTGTTGTTGAACTTCGAGGACGGAGGAGGCAAAGTGTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAAAGCTACGTGCTAACCAAAGGGTGGAGCCGGTTCGTGAAAGAAAAGAATCTGAAACCCGGTGACATTGTGAGCTTCCTCAAATCTCCCGGACAGGACAAACAGCTGTACATCGAATGGAAGTCCAGAAAGGCGTCGCCCACAACCGACCCCAACATCAACCCGGTTCACATCGTCCGACTCTTCGGAGTTGACATCGTCAAAGCTTCTTCGCCAAACACTGGGTGCGGCGAGAAGAGGAGAGAATTGGAATTTCTCGCTTTTCAATGTACCAAAAAACAAAGGATAGTCGGAGCATTGTAA

Coding sequence (CDS)

ATGAATGGAGAGAGAATTGAGGGAAATTTCAGGGGGGATGAACTACTAAAGGGAAAACACGGTCCAGGGTCTCATACTAGTCTCTGCCGCGTCGGGAGTGGCTTCACTAGTGTCGTTCTCGACTCTGACTCATGCGGCGTGGAGGCAGAGTCACGCAAATTGCCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAACGGCCGCTGGGGCGCACAGATTTACGAGAAGCATCAAAGAGTATGGTTGGGGACTTTCAACGAAGAGGAAGAAGCAGCACGTGCATACGATGTCGCTGCCCAACGCTTCCGCGGCCGTGACGCTGTCACCAATTTTAAAGATGAAGACAACGACGACGACGTATCGGCCTTCCTCAACTCCCATTCCAAAGCAGAGATCGTGGACATGCTACGTAAGCACACTTACCTACACGAGCTCCATCAAAGCAAACGAAACGCCGGGTTATCCGGTTTAGATCGCAAACATAACCGTTCCTTATCCGGGTTGGATTCGGAGGCTCGCGAACTTCTATTCGAAAAAGCCGTAACCCCAAGCGATGTAGGAAAATTGAACCGTCTCGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCAAAAGGTCTGTTGTTGAACTTCGAGGACGGAGGAGGCAAAGTGTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAAAGCTACGTGCTAACCAAAGGGTGGAGCCGGTTCGTGAAAGAAAAGAATCTGAAACCCGGTGACATTGTGAGCTTCCTCAAATCTCCCGGACAGGACAAACAGCTGTACATCGAATGGAAGTCCAGAAAGGCGTCGCCCACAACCGACCCCAACATCAACCCGGTTCACATCGTCCGACTCTTCGGAGTTGACATCGTCAAAGCTTCTTCGCCAAACACTGGGTGCGGCGAGAAGAGGAGAGAATTGGAATTTCTCGCTTTTCAATGTACCAAAAAACAAAGGATAGTCGGAGCATTGTAA

Protein sequence

MNGERIEGNFRGDELLKGKHGPGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRRELEFLAFQCTKKQRIVGAL

Homology

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-108
Identity = 214/321 (66.67%), Postives = 245/321 (76.32%), Query Frame = 0


Query: 27  SLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF 86
           +L R+GSG +SVVLDS++ GVEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTF
Sbjct: 32  NLYRMGSG-SSVVLDSEN-GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF 91

Query: 87  NEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLHEL 146
           NEE+EAARAYDVA  RFR RDAVTNFKD   D+D   FLNSHSK+EIVDMLRKHTY  EL
Sbjct: 92  NEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDEDEVDFLNSHSKSEIVDMLRKHTYNEEL 151

Query: 147 HQSKRNAGLSGLDRKHNRSLSGLDSE--------ARELLFEKAVTPSDVGKLNRLVIPKQ 206
            QSKR    +G +       SGL ++        + E LFEKAVTPSDVGKLNRLVIPK 
Sbjct: 152 EQSKRRRNGNG-NMTRTLLTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKH 211

Query: 207 HAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK 266
           HAEK+FPL + S  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+
Sbjct: 212 HAEKHFPLPS-SNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLR 271

Query: 267 PGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEK 326
            GD+VSF +S GQD+QLYI WKSR  S     +++   ++RLFGV+I   SS N   G K
Sbjct: 272 AGDVVSFSRSNGQDQQLYIGWKSRSGS-----DLDAGRVLRLFGVNISPESSRNDVVGNK 331

Query: 327 R-RELEFLAFQCTKKQRIVGA 339
           R  + E L+  C+KKQRI  A
Sbjct: 332 RVNDTEMLSLVCSKKQRIFHA 343

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.6e-106
Identity = 208/331 (62.84%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLD ++ G+E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 29  PAAALRLYRMGSGGSSVVLDPEN-GLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 88

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 141
           WLGTFNE+EEAAR+YD+AA RFRGRDAV NFK+   D D+ AFL +HSKAEIVDMLRKHT
Sbjct: 89  WLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNVLEDGDL-AFLEAHSKAEIVDMLRKHT 148

Query: 142 YLHELHQSKRNAGLSGLDRKHNRSLSGLDS-----EARELLFEKAVTPSDVGKLNRLVIP 201
           Y  EL Q+ +      +D    R+ S         + RE+LFEKAVTPSDVGKLNRLVIP
Sbjct: 149 YADELEQNNKRQLFLSVDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 208

Query: 202 KQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 261
           KQHAEK+FPL + S A +KG+L+NFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN
Sbjct: 209 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 268

Query: 262 LKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVH-IVRLFGVDI-----VKASS 321
           L+ GD+V+F +S G ++QLYI+WK R     + P  NPV  +VRLFGVDI     VK + 
Sbjct: 269 LRAGDVVTFERSTGLERQLYIDWKVR-----SGPRENPVQVVVRLFGVDIFNVTTVKPND 328

Query: 322 PNTGCGEKR-REL-EFLAFQCTKKQRIVGAL 340
               CG KR R++ +  A +C+KKQ I+ AL
Sbjct: 329 VVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.1e-103
Identity = 210/339 (61.95%), Postives = 248/339 (73.16%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLDS++ GVE ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 36  PATSMRLYRMGSGGSSVVLDSEN-GVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 95

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDE-DNDDDVSAFLNSHSKAEIVDMLRKH 141
           WLGTFNEEEEAA +YD+A +RFRGRDAVTNFK + D +D  SAFL++HSKAEIVDMLRKH
Sbjct: 96  WLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDGNDAESAFLDAHSKAEIVDMLRKH 155

Query: 142 TYLHELHQSKR-----NAGLSGLDRKHNRSLSGLDS--EARELLFEKAVTPSDVGKLNRL 201
           TY  E  QS+R     +   SGL+     +  G D+   ARE+LFEK VTPSDVGKLNRL
Sbjct: 156 TYADEFEQSRRKFVNGDGKRSGLE----TATYGNDAVLRAREVLFEKTVTPSDVGKLNRL 215

Query: 202 VIPKQHAEKNFPLQTGSTA------SSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKG 261
           VIPKQHAEK+FPL   +TA       +KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKG
Sbjct: 216 VIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKG 275

Query: 262 WSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVK 321
           WSRFVKEKNL+ GD+V F +S G D+QLYI WK R +   T        +VRLFGV+I  
Sbjct: 276 WSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQT--------VVRLFGVNIFN 335

Query: 322 ASS--PN---TGC-GEKR-RELEFLAFQCTKKQRIVGAL 340
            S+  PN     C G+KR RE +  +  C+KKQ I+  L
Sbjct: 336 VSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.5e-96
Identity = 198/316 (62.66%), Postives = 232/316 (73.42%), Query Frame = 0


Query: 28  LCRVGSGFTSVVLDSDS---CGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG 87
           L R+GSG TSVVLDS++     VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG
Sbjct: 29  LYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG 88

Query: 88  TFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLH 147
           TFNEE+EAARAYDVAA RFRGRDAVTNFKD   +++V  FLN+HSK+EIVDMLRKHTY  
Sbjct: 89  TFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTFEEEVE-FLNAHSKSEIVDMLRKHTYKE 148

Query: 148 ELHQSKRNAGLSGLDRKHNRSLSGL---DSEARELLFEKAVTPSDVGKLNRLVIPKQHAE 207
           EL Q KRN   +G +       S +     +  ELLFEK VTPSDVGKLNRLVIPK  AE
Sbjct: 149 ELDQRKRNRDGNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAE 208

Query: 208 KNFPLQTG-STASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPG 267
           K+FPL  G +  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L  G
Sbjct: 209 KHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAG 268

Query: 268 DIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRR 327
           D++SF +S  QD++ +I WKS+        ++    ++RLFGVDI   S       ++  
Sbjct: 269 DLISFKRSNDQDQKFFIGWKSKSGL-----DLETGRVMRLFGVDI---SLNAVVVVKETT 328

Query: 328 ELEFLAFQCTKKQRIV 337
           E+   + +C KKQR++
Sbjct: 329 EVLMSSLRC-KKQRVL 333

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy Swiss-Prot
Match: Q6L4H4 (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0549800 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.9e-89
Identity = 192/329 (58.36%), Postives = 221/329 (67.17%), Query Frame = 0


Query: 27  SLCRVGSGFTSVVLDSDSCGVEAES---------RKLPSSRFKGVVPQPNGRWGAQIYEK 86
           +L RVGSG  S V+D+   G EA+S          KLPSS++KGVVPQPNGRWGAQIYE+
Sbjct: 29  ALQRVGSG-ASAVMDAAEPGAEADSGGERRGGGGGKLPSSKYKGVVPQPNGRWGAQIYER 88

Query: 87  HQRVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSA----FLNSHSKAEI 146
           HQRVWLGTF  E EAARAYDVAAQRFRGRDAVTNF+     D  +A    FL S SKAE+
Sbjct: 89  HQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAESDPEAAVELRFLASRSKAEV 148

Query: 147 VDMLRKHTYLHELHQSKRN-AGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNR 206
           VDMLRKHTYL EL Q+KR  A +S    KH  S     S ARE LF+K VTPSDVGKLNR
Sbjct: 149 VDMLRKHTYLEELTQNKRAFAAISPPPPKHPASSPTSSSAAREHLFDKTVTPSDVGKLNR 208

Query: 207 LVIPKQHAEKNFPLQ------TGSTASS----------KGLLLNFEDGGGKVWRFRYSYW 266
           LVIPKQHAEK+FPLQ      T S A++          KG+LLNFED  GKVW+FRYSYW
Sbjct: 209 LVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFRYSYW 268

Query: 267 NSSQSYVLTKGWSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNI---- 312
           NSSQSYVLTKGWSRFVKEK L  GD V F ++ G++ QL+I+ K R A PTT        
Sbjct: 269 NSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRAAGKNAQLFIDCKVR-AKPTTAAAAAAFL 328

[Close]

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: XP_023529437.1 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 643 bits (1659), Expect = 4.24e-232
Identity = 315/318 (99.06%), Postives = 315/318 (99.06%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P   TSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV
Sbjct: 25  PPPETSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 84

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 141
           WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT
Sbjct: 85  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 144

Query: 142 YLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQHAE 201
           YLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQHAE
Sbjct: 145 YLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQHAE 204

Query: 202 KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPGD 261
           KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPGD
Sbjct: 205 KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPGD 264

Query: 262 IVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRRE 321
           IVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRRE
Sbjct: 265 IVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRRE 324

Query: 322 LEFLAFQCTKKQRIVGAL 339
           LEFLAFQCTKKQRIVGAL
Sbjct: 325 LEFLAFQCTKKQRIVGAL 342

[Close]

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: XP_022957101.1 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita moschata])

HSP 1 Score: 636 bits (1640), Expect = 3.34e-229
Identity = 311/318 (97.80%), Postives = 314/318 (98.74%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P   TSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV
Sbjct: 25  PPPETSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 84

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 141
           WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDED+DDDVSAFLNSHSKAEIVDMLRKHT
Sbjct: 85  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDDDDDVSAFLNSHSKAEIVDMLRKHT 144

Query: 142 YLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQHAE 201
           YLHELHQSKRNAGLSGLDRKHNRSLSGLDS+ARELLFEKAVTPSDVGKLNRLVIPKQHAE
Sbjct: 145 YLHELHQSKRNAGLSGLDRKHNRSLSGLDSDARELLFEKAVTPSDVGKLNRLVIPKQHAE 204

Query: 202 KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPGD 261
           KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK GD
Sbjct: 205 KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGD 264

Query: 262 IVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRRE 321
           IVSFLKSPGQDKQLYIEWKSRKASPTTDPN+NPVHIVRLFGVDIVKASSPNTGCGEKRRE
Sbjct: 265 IVSFLKSPGQDKQLYIEWKSRKASPTTDPNMNPVHIVRLFGVDIVKASSPNTGCGEKRRE 324

Query: 322 LEFLAFQCTKKQRIVGAL 339
           LEFLAFQCTKKQRIVGAL
Sbjct: 325 LEFLAFQCTKKQRIVGAL 342

[Close]

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: KAG7032087.1 (AP2/ERF and B3 domain-containing transcription repressor RAV2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 634 bits (1634), Expect = 2.95e-228
Identity = 312/320 (97.50%), Postives = 314/320 (98.12%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P   TSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV
Sbjct: 25  PPPETSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 84

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDD--VSAFLNSHSKAEIVDMLRK 141
           WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDED+DDD  VSAFLNSHSKAEIVDMLRK
Sbjct: 85  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDDDDDDDVSAFLNSHSKAEIVDMLRK 144

Query: 142 HTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQH 201
           HTYLHELHQSKRNAGLSGLDRKHNRSLSGLDS+ARELLFEKAVTPSDVGKLNRLVIPKQH
Sbjct: 145 HTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSDARELLFEKAVTPSDVGKLNRLVIPKQH 204

Query: 202 AEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKP 261
           AEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKP
Sbjct: 205 AEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKP 264

Query: 262 GDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKR 321
           GDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKR
Sbjct: 265 GDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKR 324

Query: 322 RELEFLAFQCTKKQRIVGAL 339
           RELEF AFQCTKKQRIVGAL
Sbjct: 325 RELEFFAFQCTKKQRIVGAL 344

[Close]

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: KAG6601301.1 (AP2/ERF and B3 domain-containing transcription factor RAV1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 632 bits (1629), Expect = 1.77e-227
Identity = 312/321 (97.20%), Postives = 314/321 (97.82%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P   TSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV
Sbjct: 25  PPPETSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 84

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDD---VSAFLNSHSKAEIVDMLR 141
           WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDED+DDD   VSAFLNSHSKAEIVDMLR
Sbjct: 85  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDDDDDDDDVSAFLNSHSKAEIVDMLR 144

Query: 142 KHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQ 201
           KHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDS+ARELLFEKAVTPSDVGKLNRLVIPKQ
Sbjct: 145 KHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSDARELLFEKAVTPSDVGKLNRLVIPKQ 204

Query: 202 HAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK 261
           HAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK
Sbjct: 205 HAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK 264

Query: 262 PGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEK 321
            GDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEK
Sbjct: 265 AGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEK 324

Query: 322 RRELEFLAFQCTKKQRIVGAL 339
           RRELEFLAFQCTKKQRIVGAL
Sbjct: 325 RRELEFLAFQCTKKQRIVGAL 345

[Close]

BLAST of Cp4.1LG01g13750 vs. NCBI nr
Match: XP_022982809.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxima])

HSP 1 Score: 622 bits (1605), Expect = 7.76e-224
Identity = 308/325 (94.77%), Postives = 312/325 (96.00%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P   TSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV
Sbjct: 20  PPPETSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 79

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFK-------DEDNDDDVSAFLNSHSKAEIV 141
           WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFK       D+D+DDDVSAFLNSHSKAEIV
Sbjct: 80  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKEEEEEEDDDDDDDDVSAFLNSHSKAEIV 139

Query: 142 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLV 201
           DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSG DS+ARELLFEKAVTPSDVGKLNRLV
Sbjct: 140 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGSDSDARELLFEKAVTPSDVGKLNRLV 199

Query: 202 IPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKE 261
           IPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKE
Sbjct: 200 IPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKE 259

Query: 262 KNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTG 321
           KNLK GDIVSFLKSPGQDKQLYIEWKSRKASPTTD N+NPVHIVRLFGVDIVKASSPNTG
Sbjct: 260 KNLKAGDIVSFLKSPGQDKQLYIEWKSRKASPTTDSNMNPVHIVRLFGVDIVKASSPNTG 319

Query: 322 CGEKRRELEFLAFQCTKKQRIVGAL 339
           CGEKRRELEFLAFQCTKKQRIVGAL
Sbjct: 320 CGEKRRELEFLAFQCTKKQRIVGAL 344

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy TrEMBL
Match: A0A6J1GYA6 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita moschata OX=3662 GN=LOC111458585 PE=3 SV=1)

HSP 1 Score: 636 bits (1640), Expect = 1.62e-229
Identity = 311/318 (97.80%), Postives = 314/318 (98.74%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P   TSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV
Sbjct: 25  PPPETSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 84

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 141
           WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDED+DDDVSAFLNSHSKAEIVDMLRKHT
Sbjct: 85  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDDDDDVSAFLNSHSKAEIVDMLRKHT 144

Query: 142 YLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLVIPKQHAE 201
           YLHELHQSKRNAGLSGLDRKHNRSLSGLDS+ARELLFEKAVTPSDVGKLNRLVIPKQHAE
Sbjct: 145 YLHELHQSKRNAGLSGLDRKHNRSLSGLDSDARELLFEKAVTPSDVGKLNRLVIPKQHAE 204

Query: 202 KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPGD 261
           KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK GD
Sbjct: 205 KNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGD 264

Query: 262 IVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRRE 321
           IVSFLKSPGQDKQLYIEWKSRKASPTTDPN+NPVHIVRLFGVDIVKASSPNTGCGEKRRE
Sbjct: 265 IVSFLKSPGQDKQLYIEWKSRKASPTTDPNMNPVHIVRLFGVDIVKASSPNTGCGEKRRE 324

Query: 322 LEFLAFQCTKKQRIVGAL 339
           LEFLAFQCTKKQRIVGAL
Sbjct: 325 LEFLAFQCTKKQRIVGAL 342

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy TrEMBL
Match: A0A6J1J5K4 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111481531 PE=3 SV=1)

HSP 1 Score: 622 bits (1605), Expect = 3.75e-224
Identity = 308/325 (94.77%), Postives = 312/325 (96.00%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P   TSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV
Sbjct: 20  PPPETSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 79

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFK-------DEDNDDDVSAFLNSHSKAEIV 141
           WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFK       D+D+DDDVSAFLNSHSKAEIV
Sbjct: 80  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKEEEEEEDDDDDDDDVSAFLNSHSKAEIV 139

Query: 142 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSEARELLFEKAVTPSDVGKLNRLV 201
           DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSG DS+ARELLFEKAVTPSDVGKLNRLV
Sbjct: 140 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGSDSDARELLFEKAVTPSDVGKLNRLV 199

Query: 202 IPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKE 261
           IPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKE
Sbjct: 200 IPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKE 259

Query: 262 KNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTG 321
           KNLK GDIVSFLKSPGQDKQLYIEWKSRKASPTTD N+NPVHIVRLFGVDIVKASSPNTG
Sbjct: 260 KNLKAGDIVSFLKSPGQDKQLYIEWKSRKASPTTDSNMNPVHIVRLFGVDIVKASSPNTG 319

Query: 322 CGEKRRELEFLAFQCTKKQRIVGAL 339
           CGEKRRELEFLAFQCTKKQRIVGAL
Sbjct: 320 CGEKRRELEFLAFQCTKKQRIVGAL 344

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy TrEMBL
Match: A0A5A7SZL8 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00730 PE=3 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 1.28e-192
Identity = 283/329 (86.02%), Postives = 289/329 (87.84%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCG--VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQ 81
           P    SLCRVGSG TSVVLDSDS G  VEAESRKLPSSR+KGVVPQPNGRWGAQIYEKHQ
Sbjct: 17  PPPDNSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSRYKGVVPQPNGRWGAQIYEKHQ 76

Query: 82  RVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKD-----EDNDDDVSAFLNSHSKAEIV 141
           RVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK       + DD VSAFLNSHSKAEIV
Sbjct: 77  RVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAFLNSHSKAEIV 136

Query: 142 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSE---ARELLFEKAVTPSDVGKLN 201
           DMLRKHTYL ELHQSKRNAGLSG DRK NR LSG D E   ARELLFEKAVTPSDVGKLN
Sbjct: 137 DMLRKHTYLDELHQSKRNAGLSGSDRKRNRLLSGSDDEPETARELLFEKAVTPSDVGKLN 196

Query: 202 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 261
           RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 197 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 256

Query: 262 VKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSP 321
           VKEKNLK GDIVSFLKS GQDKQLYIEWK+RKAS TT   INPV   RLFGVDI+KAS P
Sbjct: 257 VKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKASTTTGSAINPVQTFRLFGVDIIKAS-P 316

Query: 322 NTGCGEKRR-ELEFLAFQCTKKQRIVGAL 339
           N+GC EKRR ELEFL  QCTKKQRIVGAL
Sbjct: 317 NSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy TrEMBL
Match: A0A1S3BG02 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis melo OX=3656 GN=LOC103489254 PE=3 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 1.28e-192
Identity = 283/329 (86.02%), Postives = 289/329 (87.84%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCG--VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQ 81
           P    SLCRVGSG TSVVLDSDS G  VEAESRKLPSSR+KGVVPQPNGRWGAQIYEKHQ
Sbjct: 17  PPPDNSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSRYKGVVPQPNGRWGAQIYEKHQ 76

Query: 82  RVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKD-----EDNDDDVSAFLNSHSKAEIV 141
           RVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK       + DD VSAFLNSHSKAEIV
Sbjct: 77  RVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAFLNSHSKAEIV 136

Query: 142 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSE---ARELLFEKAVTPSDVGKLN 201
           DMLRKHTYL ELHQSKRNAGLSG DRK NR LSG D E   ARELLFEKAVTPSDVGKLN
Sbjct: 137 DMLRKHTYLDELHQSKRNAGLSGSDRKRNRLLSGSDDEPETARELLFEKAVTPSDVGKLN 196

Query: 202 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 261
           RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 197 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 256

Query: 262 VKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSP 321
           VKEKNLK GDIVSFLKS GQDKQLYIEWK+RKAS TT   INPV   RLFGVDI+KAS P
Sbjct: 257 VKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKASTTTGSAINPVQTFRLFGVDIIKAS-P 316

Query: 322 NTGCGEKRR-ELEFLAFQCTKKQRIVGAL 339
           N+GC EKRR ELEFL  QCTKKQRIVGAL
Sbjct: 317 NSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of Cp4.1LG01g13750 vs. ExPASy TrEMBL
Match: A0A0A0KR17 (DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_5G608380 PE=3 SV=1)

HSP 1 Score: 540 bits (1390), Expect = 2.11e-191
Identity = 280/329 (85.11%), Postives = 288/329 (87.54%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCG--VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQ 81
           P   TSLCRVGSG TSVVLDSDS G  VEAESRKLPSSR+KGVVPQPNGRWGAQIYEKHQ
Sbjct: 17  PPPDTSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSRYKGVVPQPNGRWGAQIYEKHQ 76

Query: 82  RVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKD-----EDNDDDVSAFLNSHSKAEIV 141
           RVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK       + DD VSAFLNSHSKAEIV
Sbjct: 77  RVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAFLNSHSKAEIV 136

Query: 142 DMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDSE---ARELLFEKAVTPSDVGKLN 201
           DMLRKHTYL ELHQSKRNAGLSG DRK NR LSG D +   ARELLFEKAVTPSDVGKLN
Sbjct: 137 DMLRKHTYLDELHQSKRNAGLSGSDRKQNRFLSGSDDDPETARELLFEKAVTPSDVGKLN 196

Query: 202 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 261
           RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF
Sbjct: 197 RLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRF 256

Query: 262 VKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSP 321
           VKEKNLK GDIVSFLKS GQDKQLYIEWK+RK S TT   INPV   RLFGVDI+K S P
Sbjct: 257 VKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKPSTTTGSAINPVQTFRLFGVDIIKVS-P 316

Query: 322 NTGCGEKRR-ELEFLAFQCTKKQRIVGAL 339
           N+GC EKRR ELEFL  QCTKKQR+VGAL
Sbjct: 317 NSGCSEKRRRELEFLTLQCTKKQRVVGAL 344

[Close]

BLAST of Cp4.1LG01g13750 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 394.4 bits (1012), Expect = 9.0e-110
Identity = 214/321 (66.67%), Postives = 245/321 (76.32%), Query Frame = 0


Query: 27  SLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTF 86
           +L R+GSG +SVVLDS++ GVEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTF
Sbjct: 32  NLYRMGSG-SSVVLDSEN-GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTF 91

Query: 87  NEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLHEL 146
           NEE+EAARAYDVA  RFR RDAVTNFKD   D+D   FLNSHSK+EIVDMLRKHTY  EL
Sbjct: 92  NEEDEAARAYDVAVHRFRRRDAVTNFKDVKMDEDEVDFLNSHSKSEIVDMLRKHTYNEEL 151

Query: 147 HQSKRNAGLSGLDRKHNRSLSGLDSE--------ARELLFEKAVTPSDVGKLNRLVIPKQ 206
            QSKR    +G +       SGL ++        + E LFEKAVTPSDVGKLNRLVIPK 
Sbjct: 152 EQSKRRRNGNG-NMTRTLLTSGLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKH 211

Query: 207 HAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLK 266
           HAEK+FPL + S  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+
Sbjct: 212 HAEKHFPLPS-SNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLR 271

Query: 267 PGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEK 326
            GD+VSF +S GQD+QLYI WKSR  S     +++   ++RLFGV+I   SS N   G K
Sbjct: 272 AGDVVSFSRSNGQDQQLYIGWKSRSGS-----DLDAGRVLRLFGVNISPESSRNDVVGNK 331

Query: 327 R-RELEFLAFQCTKKQRIVGA 339
           R  + E L+  C+KKQRI  A
Sbjct: 332 RVNDTEMLSLVCSKKQRIFHA 343

[Close]

BLAST of Cp4.1LG01g13750 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 387.5 bits (994), Expect = 1.1e-107
Identity = 208/331 (62.84%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLD ++ G+E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 29  PAAALRLYRMGSGGSSVVLDPEN-GLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 88

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 141
           WLGTFNE+EEAAR+YD+AA RFRGRDAV NFK+   D D+ AFL +HSKAEIVDMLRKHT
Sbjct: 89  WLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNVLEDGDL-AFLEAHSKAEIVDMLRKHT 148

Query: 142 YLHELHQSKRNAGLSGLDRKHNRSLSGLDS-----EARELLFEKAVTPSDVGKLNRLVIP 201
           Y  EL Q+ +      +D    R+ S         + RE+LFEKAVTPSDVGKLNRLVIP
Sbjct: 149 YADELEQNNKRQLFLSVDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 208

Query: 202 KQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 261
           KQHAEK+FPL + S A +KG+L+NFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN
Sbjct: 209 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 268

Query: 262 LKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVH-IVRLFGVDI-----VKASS 321
           L+ GD+V+F +S G ++QLYI+WK R     + P  NPV  +VRLFGVDI     VK + 
Sbjct: 269 LRAGDVVTFERSTGLERQLYIDWKVR-----SGPRENPVQVVVRLFGVDIFNVTTVKPND 328

Query: 322 PNTGCGEKR-REL-EFLAFQCTKKQRIVGAL 340
               CG KR R++ +  A +C+KKQ I+ AL
Sbjct: 329 VVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Cp4.1LG01g13750 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 387.5 bits (994), Expect = 1.1e-107
Identity = 208/331 (62.84%), Postives = 249/331 (75.23%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLD ++ G+E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 29  PAAALRLYRMGSGGSSVVLDPEN-GLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 88

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHT 141
           WLGTFNE+EEAAR+YD+AA RFRGRDAV NFK+   D D+ AFL +HSKAEIVDMLRKHT
Sbjct: 89  WLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNVLEDGDL-AFLEAHSKAEIVDMLRKHT 148

Query: 142 YLHELHQSKRNAGLSGLDRKHNRSLSGLDS-----EARELLFEKAVTPSDVGKLNRLVIP 201
           Y  EL Q+ +      +D    R+ S         + RE+LFEKAVTPSDVGKLNRLVIP
Sbjct: 149 YADELEQNNKRQLFLSVDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIP 208

Query: 202 KQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 261
           KQHAEK+FPL + S A +KG+L+NFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN
Sbjct: 209 KQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKN 268

Query: 262 LKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVH-IVRLFGVDI-----VKASS 321
           L+ GD+V+F +S G ++QLYI+WK R     + P  NPV  +VRLFGVDI     VK + 
Sbjct: 269 LRAGDVVTFERSTGLERQLYIDWKVR-----SGPRENPVQVVVRLFGVDIFNVTTVKPND 328

Query: 322 PNTGCGEKR-REL-EFLAFQCTKKQRIVGAL 340
               CG KR R++ +  A +C+KKQ I+ AL
Sbjct: 329 VVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Cp4.1LG01g13750 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 377.1 bits (967), Expect = 1.5e-104
Identity = 210/339 (61.95%), Postives = 248/339 (73.16%), Query Frame = 0


Query: 22  PGSHTSLCRVGSGFTSVVLDSDSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRV 81
           P +   L R+GSG +SVVLDS++ GVE ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRV
Sbjct: 36  PATSMRLYRMGSGGSSVVLDSEN-GVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRV 95

Query: 82  WLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKDE-DNDDDVSAFLNSHSKAEIVDMLRKH 141
           WLGTFNEEEEAA +YD+A +RFRGRDAVTNFK + D +D  SAFL++HSKAEIVDMLRKH
Sbjct: 96  WLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDGNDAESAFLDAHSKAEIVDMLRKH 155

Query: 142 TYLHELHQSKR-----NAGLSGLDRKHNRSLSGLDS--EARELLFEKAVTPSDVGKLNRL 201
           TY  E  QS+R     +   SGL+     +  G D+   ARE+LFEK VTPSDVGKLNRL
Sbjct: 156 TYADEFEQSRRKFVNGDGKRSGLE----TATYGNDAVLRAREVLFEKTVTPSDVGKLNRL 215

Query: 202 VIPKQHAEKNFPLQTGSTA------SSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKG 261
           VIPKQHAEK+FPL   +TA       +KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKG
Sbjct: 216 VIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKG 275

Query: 262 WSRFVKEKNLKPGDIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVK 321
           WSRFVKEKNL+ GD+V F +S G D+QLYI WK R +   T        +VRLFGV+I  
Sbjct: 276 WSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQT--------VVRLFGVNIFN 335

Query: 322 ASS--PN---TGC-GEKR-RELEFLAFQCTKKQRIVGAL 340
            S+  PN     C G+KR RE +  +  C+KKQ I+  L
Sbjct: 336 VSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

[Close]

BLAST of Cp4.1LG01g13750 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 354.4 bits (908), Expect = 1.0e-97
Identity = 198/316 (62.66%), Postives = 232/316 (73.42%), Query Frame = 0


Query: 28  LCRVGSGFTSVVLDSDS---CGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG 87
           L R+GSG TSVVLDS++     VEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG
Sbjct: 29  LYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLG 88

Query: 88  TFNEEEEAARAYDVAAQRFRGRDAVTNFKDEDNDDDVSAFLNSHSKAEIVDMLRKHTYLH 147
           TFNEE+EAARAYDVAA RFRGRDAVTNFKD   +++V  FLN+HSK+EIVDMLRKHTY  
Sbjct: 89  TFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTFEEEVE-FLNAHSKSEIVDMLRKHTYKE 148

Query: 148 ELHQSKRNAGLSGLDRKHNRSLSGL---DSEARELLFEKAVTPSDVGKLNRLVIPKQHAE 207
           EL Q KRN   +G +       S +     +  ELLFEK VTPSDVGKLNRLVIPK  AE
Sbjct: 149 ELDQRKRNRDGNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAE 208

Query: 208 KNFPLQTG-STASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKPG 267
           K+FPL  G +  S KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L  G
Sbjct: 209 KHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAG 268

Query: 268 DIVSFLKSPGQDKQLYIEWKSRKASPTTDPNINPVHIVRLFGVDIVKASSPNTGCGEKRR 327
           D++SF +S  QD++ +I WKS+        ++    ++RLFGVDI   S       ++  
Sbjct: 269 DLISFKRSNDQDQKFFIGWKSKSGL-----DLETGRVMRLFGVDI---SLNAVVVVKETT 328

Query: 328 ELEFLAFQCTKKQRIV 337
           E+   + +C KKQR++
Sbjct: 329 EVLMSSLRC-KKQRVL 333

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g13750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZWM9	1.3e-108	66.67	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
P82280	1.6e-106	62.84	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q9C6M5	2.1e-103	61.95	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
Q9LS06	1.5e-96	62.66	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
Q6L4H4	2.9e-89	58.36	AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. jap...	[more]

BLAST of Cp4.1LG01g13750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529437.1	4.24e-232	99.06	AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita pe...	[more]
XP_022957101.1	3.34e-229	97.80	AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita mo...	[more]
KAG7032087.1	2.95e-228	97.50	AP2/ERF and B3 domain-containing transcription repressor RAV2, partial [Cucurbit...	[more]
KAG6601301.1	1.77e-227	97.20	AP2/ERF and B3 domain-containing transcription factor RAV1, partial [Cucurbita a...	[more]
XP_022982809.1	7.76e-224	94.77	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita maxim...	[more]

BLAST of Cp4.1LG01g13750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYA6	1.62e-229	97.80	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita ...	[more]
A0A6J1J5K4	3.75e-224	94.77	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A5A7SZL8	1.28e-192	86.02	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis me...	[more]
A0A1S3BG02	1.28e-192	86.02	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis me...	[more]
A0A0A0KR17	2.11e-191	85.11	DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_5G608380 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g13750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13260.1	9.0e-110	66.67	related to ABI3/VP1 1	[more]
AT1G68840.1	1.1e-107	62.84	related to ABI3/VP1 2	[more]
AT1G68840.2	1.1e-107	62.84	related to ABI3/VP1 2	[more]
AT1G25560.1	1.5e-104	61.95	AP2/B3 transcription factor family protein	[more]
AT3G25730.1	1.0e-97	62.66	ethylene response DNA binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 178..283 e-value: 4.4E-22 score: 89.4
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 178..282 e-value: 2.4E-27 score: 94.8
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 178..283 score: 13.986517
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 177..265 e-value: 6.89242E-27 score: 100.095
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 58..119 e-value: 3.6E-30 score: 116.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 57..105 e-value: 5.1E-10 score: 39.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 58..113 score: 20.362789
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 57..114 e-value: 5.4087E-27 score: 99.2682
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 57..114 e-value: 1.3E-20 score: 75.3
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 167..291 e-value: 2.5E-45 score: 155.0
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 176..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31140:SF115	PROTEIN RAV1, PUTATIVE-RELATED	coord: 25..339
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 25..339
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 57..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g13750.1	Cp4.1LG01g13750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity