Cp4.1LG01g13650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g13650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Homocysteine S-methyltransferase family protein
Location	Cp4.1LG01: 8072804 .. 8079485 (-)
RNA-Seq Expression	Cp4.1LG01g13650
Synteny	Cp4.1LG01g13650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGTCATGTCCTTACCGTTTCTGTTTTTTTTTTTTTNTTTAAGTAATTAAAGCAAGTTGTAAGGGTTAATGTGACGTGTATGAAATTGAAGCCTATGAGATGTGATGTGGTGGTCCACAAGAAAATGTTCCCAACTTTTGACCTCCAAATTTCTGGTCCCTCTCCCATCTTGCTGTTGATTTAGGGGGAGGGATGAGTAAGTTTGGACCATCCATCAACGGCATCACGTATGATAAGTTGGTAGGCATATGATATTGGAGCAAAGTAGGGGACCACATACGAATAAGACAATCTTGAAGATAAGATGACTACAAAAATTTTAAAAGAAAGGAAAGTTATTACCCATATCAATAAAGCCATCACGTTTGAAGTGTTTTTGGTATAAGGGTAGATTAGAGATTTACCAAAACATATGCATTTATTCATAGACCAAACTGGGGTGAGTTATTTGACATTATATAACAATATTTATGAGAGTAGGTATTTTGTATTATTTGTGTGTGTGTATATATATGTTCCCAACCACCAAGGCTGAGGCGCGCGTTCCAATTGAAAAGGGCAGTGCTAGAGAGTTTAATTGCGAGGCTGGAAGAGGCAGCTATCCAGCCAACCATTGCATGTCTTTCACTGAATCTGCCCCATTTTGCCTGACGATATTCAGTTCTATATATCCCCTAATGTCTTTAATGTTCTCTCCATCTAGCTAACATGATGGTGCACAAGTTGAGGTATTCTCAAGAACACATCTTTTTTCAGTATATATATTATACTGCCCACCCAATTTAACTTTCAAACTTATTATTGATGGGTAGGGTGGGCAGTTATTCATTATTTCCTGTTCAACCCATTATTTTGTCACTCTAGTTTACTTCACCCTTGTAGGTCAGGGTTAGGTGAATCTCCTGCTTACATTTCAAACAAACGATTTAATAATTTATCTACTTATGCTTAATGAAATCAAACAAGATTTGGGTTTTATTCAGAATAGTGAATGGGCTTGAGCCCATCAATTTGAAAAATGGAAATGGATTTGGGTTTTATTCAGAATAGTGAATGGGCTTGAGCCCATCAATTTGAAAAATGGAAATGGATTTGGGTTTTATACTCCACTAACCCCGGGGGCATCGAAACGGGGATAGTGGCGCGCACCACTGGACAAACTGACTTCCGGAGAAGGAGAAGAAACACGGCGCTGGAGGTTGTGCGGTGATTGATGGAGGTTTCGCTACGCAGCTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGTCATGTCCTTACCGTTTCTGTTTTTTTTTTTTTTGTTTCGGTGCATCACGTTCTCATCGGTGCTTATTGATTGGGTTAAATGCGCAGGTCCATTTGGAGTACTTGGAGGCAGGGATAAATATTTTGGTTTCTTCGTCTTACCAGGTTTGTAATGCTAATGGACTGAGCTTTCTTTATTCTTTTTTCGACTACATACGTGAAAAACTTTTGTCCATTGCACTCTGTGACGGCTTTTGCAGTACATTGTTTTTCCTTTTTTTTAAAAAAAAATGTTTACTGTTGTTTATTTAAAACTTGGGGATTCAAAGTGGATATTTGAATGTGAATGCGGACCAAAGTGATCACTCCTCTTGAATTCAAATTTAAGTTCAAACTGAGCATTTCTATCCTGTCGTGAAACAATGAACTAAAATTGAACGGCTGTTGTACACTCACGAATGTGGAGAATTTCGATCAAGTTAATTGAATTTGATTAAAGTGCTTTCCATGGCATAGCATTTTTGGACATTCAAGGTGTTACAATTAGTGGAGTGGATCCAAATTATGCTACATGATGGATTATAACCGGTTGTTGCTAGAAGGGACATTCAATAGGCGTCAGTATTTAATATTTGGAAGGGTAATGTTTGTATGCTTACTGATTTCTAACCACATCGGCTTAGCTCAATTGTCAAAAGTGGAAGCTATGAACTAGGATATCTATTCTAAATGTATCACTACCTATCTAAGATATTAAATATTCAGAAAGTTTTCCAATGTTAAACGTTGTAGAATTAAGCGATCAGTTCATCTGATTGATTCAGTGACATTTAAACTGATATCTAGCTTGTCATGCTATATTGCCATCACAAGGTAAAAGAGATTGAAATTCAATTTTGCATAGCTTAGGATTTGTATAGGTCAATAAATTGAATCTATAAGCCCGTTTCAGTTTTCACAGCTTTATTATACCATATCAGAGTTCTCTATATTTTATTGACCCGAAATGAAATTCGACTGTGAAATATGACATAGTTTTGTGTCTTAAAATTTCTTAAGAATTCCAATAATCTTACGGAATAAGGATAGAAGTATCTTGCCTTGTTTTATTTCTTAATTTTTTTTTTATAGAAATTATTCCTTCTGTAAATCAGTATTCAAGCCAGTTAATTACTCTCTCACACATTTTATCCTATTACAGGCCACCATTCCTGGGTTTATATCATAGGAGCTGTCCATGGAAGAAGGGGAGTTGCTCTTAGAAAAGAGTGTTAAAATGGAAGCTCGTGATAGTTTTTGGGATTCTGTGAAGAGTATCCCTGGACATAATTACAATCGGGCTTTGTTGCAGCATCCATTGGAAGCTATGGTGCTTATCTGCTGATGGCTCAGAGTACAGGTGAATTATACATTTGAATATTGAAATAAATATGACTCTGACATTCTGAACTAAACATATCCCAGGTGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGGTTTGTTTTATGCCAACTCCTCTTATATCATCTAAGTTGTGGCTTCATGATAGAATCACTCTTGCTGCCTCAGTGATACCACTGTAAATTATATTGTTATGTTTTGGTATGACTTATAGAGTATTTGAGAAAACAGTCTATGGTATATTTTATAAACTGTTCATCTCAATTTATGAGTTGTTCATTTCAAGGGATCAAGGTAATTTGACTACCATCATGGCATCAATGGGGGATGCATGCATCAGTAGGTCTTAGTTTATTGTGCTTAATTCTTGATCAAAATTCTTTTATAATAAAAATTTGAATCAAATCCTATTCAAACCCCTTAATTTAAGATTTTTCCCATTTTACACTTTCAGATATTATATTTTAATTCCTAAACCAGAATCCTGATTTAGTTGGTCTTTGTTATGAAATGGAAGAAAAATGTTGAATGTTTTTTATAATTGTCATGAGCATGTCGGACAATCGTTTCAATTGATTTTGCAATTTGTTTGGGTTTCTGTCCTCTTTGTGATCTTCTTTCCAACCCCCCACTCTGGTCTTAAAAAAAAAAAAAAAAAAGAAGGCCTGTGTGGAGTTGCTCGAAGAAGAAAACGTCCAAATTCCATCTTAGATCTGCTTTAGCTCCGTAGATGGCGAGAATGCACCGTCGGGAGAGAGCTTCGAGAAGTGCCTTCATGCCATTAATAAAAGTGACAAAGTAACTGTAGTTGGCATAAACTGTACACCTCCTCACTTTATTGAAGCTCCGATTTGTAAGTTCAAAGAGGTAGGAACTAAATCTCTTAGTGTTGATTTAATATTGTTGTGTTGGTCACTTGTTTTGAAACCGAAATGTTCACTTCAGTTAACCAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGGTGAGTCAACTTAATTCTTCCCTACCCCACTCTGATATTTCATGGCTTGTGGGCCTACATTGCAATATTTCCATTACTAATTAGCGTTCTGGTTTTGGTAGCCATCAAATTGTTTTGTTGATGACAAATTTGAATCATTTAGTTCAAGATGGCGTGATTTGGGAGCAAAATTCATTGGAGGCTGTTGTCGTACGACACCGTCTACCATCCTAGCTATATCAAAGGTTTGGAAAGAAAGCTCCCATTAGTGACCGCCGTCTAATTTTTAACCTTTTTTGTTCTTTTGTAAACTACTAGATTGAGGTGTTATGGTTTGCATTCTGACATAATTTTTTCGGCTTATAGAATTTTACTGCATAAAACTCGGGTAGGCATTTTTACTTCTTCATGAAATTCAACTAAATTGAGGAAAAGAAAACTATTACATTTTCAGAACATATTTTATATTTTATTTCAAAGAATGATAAAAATCTTAGAGAATGGATCCATCAGGACAATGCAAACTTTGGATGCTGAGGCTGATCTTGGAAGTTTATAAGCAAGCAGGAACATAAAAACCAACAGAGTTCCAATCCCTTACTGGATTAGGAAATCTTCTCCTTTTTTTCTGGGAAAAGATAAAAAATGGAGGAACAGTCGTTTATCCTCAAAGTAGACTGAGAGGAAGAAGCCGAAAAGTATGGGATTAGACAGAAGGTAATGGATAATGCAATATTGGGATGGGGGCCCCTAAACAAGATCTCAACTTTTTGTCGAACCAAAAAAAGAAGTGTCCCTTTCTCAATTAGGGTGCCCCACAAATTTACGCAGCCAATCAGAGAACAACCCTTTGGATGAACTATAACCCCTCGACCAATGAAGAAGTGGATAAGACCCTTCTGTGGACCTACCCACTGCAAGTTCTTTTTCTATATTAAACAAGTGCACAAAAGTGCAATTCCTTCTCAGTCTAGACCCTTCTCTGTCGTGGATTTAGCTGGAAAAGCGCAGTCCGAGGGGCATTCCCCAGGTCCCTCCATGGTGTCTAGTTAAAATAGTTTCTCGTGAATATTTATAAAACAACAATGACGAACTAGTAGAAATTATCAGTACAGTGTCCCAATTTGAAGCCTGCAAGTTGTGTTTTTAATACAAACTCACATTTTTAACTGAGTTTCAGTGTATTGACTCTTTATCATTTCTGGTTATTTGAATTTTATGATGCCGAGGAAAAGCGTGCAGAAAACAGCAGAGGGAGGCAAGACCGCCAGACCCTGCGAAAGCTGTATCATCAAGCGGGCTCGGTGGTACTGCGCTGCCGATGATGCTTTTCTGTGCCAAGCTTGTGATGCTTCAGTTCACTCCGCCAACTCCTTGGCTCGTAGGCACGAGCGAGTTCGTCTTCCAACTGTCTCTTACAGACCCTCTTCAGACAACTCCTCTGCTGCTTCATGGCACCAAGGCTTCACCAGAAAGCCACGGTCACCTCGAATGGGAAAGACCGCTCCGATGAGGAAGCCATTTCCTCAGGTACCGGAGGTGAGTGCTAAAGAAGAAACGGAAGATCAAGAACAGCTCCTCCTTTATCGAGTTCCTGAATTGGGAACCGATTCAAAAGTTGGTAATTTGTTTAGTTTTGTTGGGGAAAAAGAAAACTCAAATGGGTATCTCTCGTACCATATGGATCCTGCTGAATTCGCGGCTGATGTTGAGAGTTTGTTGGGGAAGTCGCTTAATAATAAGTGCTTAGATATGGAAGAACTGGGGCTAGCGGCTTCCAAAGATCACTCAACGACAAAGGATGATTACTCTTTAAACAGCCACGAACTTATTAGGATTGAACAAGATGAGATAGAGAAATTGACTCCAATGCTCAGCGCAGAAGCCGATACAATGAGGGAGCCATTTGAACTGAACTTTATGGACTTCGGCAGAAATCCAACGACGTGCGGTGAGGAAAACAAGGTGATGATGGAAGTCAAGGAAGTGGTGAAGAAGGGTGAACTTGAGATGGAAGAGACAAAGATTGTTAACAACAAAAAGAAAGTATCATTGAGTTTAGATAGTGAAGCAGTGATAATGGCTTGGGGGAGCAGAGGAACTCCATGGATGTCCGATGATGGACCGAATCTCGACTTCAATTATCACTGGCTGGACTACATGGTTTGTTCCTTTACCTTCTTTTTCATGTCCAATGAAATTTTTAAGCTTATAATGTTTTGGTATTACAAAAGCTCTCTGAAAGTGAAGTATGTTTCTATGAAGGGTACGTGGGAAAGTGAATATTATTATCAGGCTTTCGGGGAGGTTAGCGGCGGAATCAGGCGACAAGCGGCAGCCGGAGTTGAAGGAGAGAGAGAAGCACGAGTGTCGAGATACAGAGAGAAGAGAAGGACGAGATTATTTGAAAAGAAAATAAGATATGAAGTCCGGAAGCTGAATGCAGAGAAGAGACCGAGAATGAAGGGGAGGTTTGTGAAGAGATCATCTTGCTTTGCGCCGCCACCTTTGCCTCTCTTTAATTAGTCATTAATCTTCAATCATTAATACAATAATCCACTTTTTCAAATTTATTTCATCAATTTTGGGCTGTTAGCGGTCCGCTAGCCCATCAATGCCCAGTAATATGGTCCACTGGTCTATCAATGGGCCTGTGGGCTAGTCCAGTAGTTCGTCAATGGGCTTATGGGCTGGTCAGTAGTCTTATCAATGGGTCAGGTACCCAAACTTTTTGTTGAATAGTTATGCTATTGTATTTAGTTTAAAAAAGAATATATATAAGGTAAGTCATACTCACACCTAACATTGTTTGGAACATAAATGGAGATGCT

mRNA sequence

CTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGAGAAGAAACACGGCGCTGGAGGTTGTGCGGTGATTGATGGAGGTTTCGCTACGCAGCTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGTCCATTTGGAGTACTTGGAGGCAGGGATAAATATTTTGGTTTCTTCGTCTTACCAGGAGCTGTCCATGGAAGAAGGGGAGTTGCTCTTAGAAAAGAGTGTTAAAATGGAAGCTCGTGATAGTTTTTGGGATTCTGTGAAGAGTGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGTTAACCAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGCCATCAAATTGTTTTGTTGATGACAAATTTGAATCATTTAGTTCAAGATGGCGTGATTTGGGAGCAAAATTCATTGGAGGCTGTTGTCGTACGACACCGTCTACCATCCTAGCTATATCAAAGGTTTGGAAAGAAAGCTCCCATTAGTGACCGCCGTCTAATTTTTAACCTTTTTTGTTCTTTTGTAAACTACTAGATTGAGGTGTTATGGTTTGCATTCTGACATAATTTTTTCGGCTTATAGAATTTTACTGCATAAAACTCGGGTAGGCATTTTTACTTCTTCATGAAATTCAACTAAATTGAGGAAAAGAAAACTATTACATTTTCAGAACATATTTTATATTTTATTTCAAAGAATGATAAAAATCTTAGAGAATGGATCCATCAGGACAATGCAAACTTTGGATGCTGAGGCTGATCTTGGAAGTTTATAAGCAAGCAGGAACATAAAAACCAACAGAGTTCCAATCCCTTACTGGATTAGGAAATCTTCTCCTTTTTTTCTGGGAAAAGATAAAAAATGGAGGAACAGTCGTTTATCCTCAAAGTAGACTGAGAGGAAGAAGCCGAAAAGTATGGGATTAGACAGAAGGTAATGGATAATGCAATATTGGGATGGGGGCCCCTAAACAAGATCTCAACTTTTTGTCGAACCAAAAAAAGAAGTGTCCCTTTCTCAATTAGGGTGCCCCACAAATTTACGCAGCCAATCAGAGAACAACCCTTTGGATGAACTATAACCCCTCGACCAATGAAGAAGTGGATAAGACCCTTCTGTGGACCTACCCACTGCAAGTTCTTTTTCTATATTAAACAAGTGCACAAAAGTGCAATTCCTTCTCAGTCTAGACCCTTCTCTGTCGTGGATTTAGCTGGAAAAGCGCAGTCCGAGGGGCATTCCCCAGGTCCCTCCATGGTGTCTAGTTAAAATAGTTTCTCGTGAATATTTATAAAACAACAATGACGAACTAGTAGAAATTATCAGTACAGTGTCCCAATTTGAAGCCTGCAAGTTGTGTTTTTAATACAAACTCACATTTTTAACTGAGTTTCAGTGTATTGACTCTTTATCATTTCTGGTTATTTGAATTTTATGATGCCGAGGAAAAGCGTGCAGAAAACAGCAGAGGGAGGCAAGACCGCCAGACCCTGCGAAAGCTGTATCATCAAGCGGGCTCGGTGGTACTGCGCTGCCGATGATGCTTTTCTGTGCCAAGCTTGTGATGCTTCAGTTCACTCCGCCAACTCCTTGGCTCGTAGGCACGAGCGAGTTCGTCTTCCAACTGTCTCTTACAGACCCTCTTCAGACAACTCCTCTGCTGCTTCATGGCACCAAGGCTTCACCAGAAAGCCACGGTCACCTCGAATGGGAAAGACCGCTCCGATGAGGAAGCCATTTCCTCAGGTACCGGAGGTGAGTGCTAAAGAAGAAACGGAAGATCAAGAACAGCTCCTCCTTTATCGAGTTCCTGAATTGGGAACCGATTCAAAAGTTGGTAATTTGTTTAGTTTTGTTGGGGAAAAAGAAAACTCAAATGGGTATCTCTCGTACCATATGGATCCTGCTGAATTCGCGGCTGATGTTGAGAGTTTGTTGGGGAAGTCGCTTAATAATAAGTGCTTAGATATGGAAGAACTGGGGCTAGCGGCTTCCAAAGATCACTCAACGACAAAGGATGATTACTCTTTAAACAGCCACGAACTTATTAGGATTGAACAAGATGAGATAGAGAAATTGACTCCAATGCTCAGCGCAGAAGCCGATACAATGAGGGAGCCATTTGAACTGAACTTTATGGACTTCGGCAGAAATCCAACGACGTGCGGTGAGGAAAACAAGGTGATGATGGAAGTCAAGGAAGTGGTGAAGAAGGGTGAACTTGAGATGGAAGAGACAAAGATTGTTAACAACAAAAAGAAAGTATCATTGAGTTTAGATAGTGAAGCAGTGATAATGGCTTGGGGGAGCAGAGGAACTCCATGGATGTCCGATGATGGACCGAATCTCGACTTCAATTATCACTGGCTGGACTACATGGGTACGTGGGAAAGTGAATATTATTATCAGGCTTTCGGGGAGGTTAGCGGCGGAATCAGGCGACAAGCGGCAGCCGGAGTTGAAGGAGAGAGAGAAGCACGAGTGTCGAGATACAGAGAGAAGAGAAGGACGAGATTATTTGAAAAGAAAATAAGATATGAAGTCCGGAAGCTGAATGCAGAGAAGAGACCGAGAATGAAGGGGAGGTTTGTGAAGAGATCATCTTGCTTTGCGCCGCCACCTTTGCCTCTCTTTAATTAGTCATTAATCTTCAATCATTAATACAATAATCCACTTTTTCAAATTTATTTCATCAATTTTGGGCTGTTAGCGGTCCGCTAGCCCATCAATGCCCAGTAATATGGTCCACTGGTCTATCAATGGGCCTGTGGGCTAGTCCAGTAGTTCGTCAATGGGCTTATGGGCTGGTCAGTAGTCTTATCAATGGGTCAGGTACCCAAACTTTTTGTTGAATAGTTATGCTATTGTATTTAGTTTAAAAAAGAATATATATAAGGTAAGTCATACTCACACCTAACATTGTTTGGAACATAAATGGAGATGCT

Coding sequence (CDS)

CTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGAGAAGAAACACGGCGCTGGAGGTTGTGCGGTGATTGATGGAGGTTTCGCTACGCAGCTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGTCCATTTGGAGTACTTGGAGGCAGGGATAAATATTTTGGTTTCTTCGTCTTACCAGGAGCTGTCCATGGAAGAAGGGGAGTTGCTCTTAGAAAAGAGTGTTAAAATGGAAGCTCGTGATAGTTTTTGGGATTCTGTGAAGAGTGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGTTAACCAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGCCATCAAATTGTTTTGTTGATGACAAATTTGAATCATTTAGTTCAAGATGGCGTGATTTGGGAGCAAAATTCATTGGAGGCTGTTGTCGTACGACACCGTCTACCATCCTAGCTATATCAAAGGTTTGGAAAGAAAGCTCCCATTAG

Protein sequence

LEKHGAVIDDPLWSAVCLISDHDLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQELSMEEGELLLEKSVKMEARDSFWDSVKSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQLTNKHIVVYPNSGEVWDGRAKKWLPSNCFVDDKFESFSSRWRDLGAKFIGGCCRTTPSTILAISKVWKESSH

Homology

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BLAST of Cp4.1LG01g13650 vs. ExPASy Swiss-Prot
Match: A4ZGQ8 (Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.1e-67
Identity = 151/315 (47.94%), Postives = 175/315 (55.56%), Query Frame = 0


Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLI+K      GGCAV+DGGFATQLE HGA I+DPLWSAV LI D +LIK+VH+EYLEAG
Sbjct: 12  DLIEK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKDPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSV------------ 142
            +++V+SSYQ          LSMEE E LL+KSVK+  EARD FWD V            
Sbjct: 72  ADVVVTSSYQATIPGFLSRGLSMEESESLLQKSVKLAVEARDRFWDKVSKTSGHSYNRAL 131

Query: 143 -----------------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLE 202
                                  + V++DKLKDFHRRR+Q+LV+ASPDLLAFETIPNKLE
Sbjct: 132 VAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLE 191

Query: 203 AQ---------------------------------------------------------- 224
           AQ                                                          
Sbjct: 192 AQACVELLEEENVQIPAWICFTSVDGENAPSGESFQECLETLNKSNNICAVGINCAPPQF 251

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BLAST of Cp4.1LG01g13650 vs. ExPASy Swiss-Prot
Match: Q9SDL7 (Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HMT-1 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.1e-66
Identity = 149/315 (47.30%), Postives = 176/315 (55.87%), Query Frame = 0


Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLIKK      GGCAV+DGGFATQLE HGA I+DPLWSAV LI + +LIK+VH+EYLEAG
Sbjct: 12  DLIKK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSV------------ 142
            +I+V+SSYQ          LS+EE E LL+KSV++  EARD FW+ V            
Sbjct: 72  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRAL 131

Query: 143 -----------------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLE 202
                                  ++V++DKLKDFHRRRLQ+LV+A PDLLAFETIPNKLE
Sbjct: 132 VAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLE 191

Query: 203 AQ---------------------------------------------------------- 224
           AQ                                                          
Sbjct: 192 AQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGINCAPPQF 251

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BLAST of Cp4.1LG01g13650 vs. ExPASy Swiss-Prot
Match: Q9FUN0 (Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-53
Identity = 124/308 (40.26%), Postives = 151/308 (49.03%), Query Frame = 0


Query: 33  AGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQ 92
           AGGCAVIDGGFATQLE  GA I+DPLWSA CLI+   L+K+VH++YLEAG ++++SSSYQ
Sbjct: 11  AGGCAVIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQ 70

Query: 93  E---------LSMEEGELLLEKSVKM--EARDSFWDSV---------------------- 152
                     +S+ E E LL  SVK+  EARD FW S                       
Sbjct: 71  ATIPGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYNRALVAASIGSYGA 130

Query: 153 -------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQL------- 212
                          +  +KLKDFHRRRLQ+L  A PDL+AFE IPN++EAQ        
Sbjct: 131 YLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQALVELLEE 190

Query: 213 ------------------------------------------------------------ 227
                                                                       
Sbjct: 191 EKVQIPSWICFSSVDGKNLCSGESFADCLKILNASEKVAVVGVNCTPPQFIEGIICEFRK 250

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BLAST of Cp4.1LG01g13650 vs. ExPASy Swiss-Prot
Match: Q8LAX0 (Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HMT3 PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 7.9e-46
Identity = 119/312 (38.14%), Postives = 151/312 (48.40%), Query Frame = 0


Query: 34  GGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQE 93
           GG AV+DGGFAT+L++HGA I+DPLWSA CLI+   L+ KVHL+YLE+G NI++++SYQ 
Sbjct: 21  GGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQA 80

Query: 94  ---------LSMEEGELLLEKSVKM--EARDSF--------WDSV--------------- 153
                    LS+ E E LL +SV++  EAR+ F        WD                 
Sbjct: 81  TIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVAAS 140

Query: 154 -------------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEA--- 213
                               SV+ + LKDFHRRR+QIL  +  DL+AFETIPNKLEA   
Sbjct: 141 VGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAY 200

Query: 214 ------------------------------------------------------------ 225
                                                                       
Sbjct: 201 ADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSCKNVVAIGINCTAPRYIHAL 260

[Close]

BLAST of Cp4.1LG01g13650 vs. ExPASy Swiss-Prot
Match: Q9M1W4 (Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42
Identity = 109/309 (35.28%), Postives = 145/309 (46.93%), Query Frame = 0


Query: 34  GGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQE 93
           GG AVIDGG AT+ E+HGA ++DPLWSA CL++   LI  VHL+YLEAG +I+ S+SYQ 
Sbjct: 17  GGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQA 76

Query: 94  ---------LSMEEGELLLEKSVKM--EARDSFWDSV----------------------- 153
                     S EE E LL+KSV++  EAR+S++D                         
Sbjct: 77  TIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPILVAASVG 136

Query: 154 -----------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ---- 213
                             S+ ++KLKDFHRRRLQ+L ++  DL+AFETIPNK+EAQ    
Sbjct: 137 SYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFAD 196

Query: 214 ------------------------------------------------------------ 224
                                                                       
Sbjct: 197 LLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPPRFIEGLVL 256

[Close]

BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: XP_038893227.1 (homocysteine S-methyltransferase 1 [Benincasa hispida])

HSP 1 Score: 312 bits (799), Expect = 2.60e-103
Identity = 182/312 (58.33%), Postives = 190/312 (60.90%), Query Frame = 0


Query: 33  AGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQ 92
           AGGCAVIDGGFATQLEKHGAVI+DPLWSAVCLI+D DLIKKVHLEYL+AG +ILVSSSYQ
Sbjct: 17  AGGCAVIDGGFATQLEKHGAVINDPLWSAVCLINDPDLIKKVHLEYLKAGADILVSSSYQ 76

Query: 93  E---------LSMEEGELLLEKSVKM--EARDSFWDSVKS-------------------- 152
                     LS+EEGELLLEKSVK+  EARD FWDSVKS                    
Sbjct: 77  ATIPGFISKGLSVEEGELLLEKSVKLAIEARDGFWDSVKSIPGHKYHRALVAASIGSYGA 136

Query: 153 ---------------VNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ-------- 212
                          VNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ        
Sbjct: 137 YLADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEE 196

Query: 213 ------------------------------------------------------------ 230
                                                                       
Sbjct: 197 ENIQIPSWICFSSIDGENAPSGESFEKCLHAINKSDKVNAVGINCTPPHFIEALITKFKE 256

[Close]

BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: XP_023550566.1 (homocysteine S-methyltransferase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303 bits (775), Expect = 1.32e-101
Identity = 153/172 (88.95%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 72  KKVHLEYLEAGINILVSSSYQELSMEEGELLLEKSVKMEARDSFWDSVKSV---NVDK-- 131
             VHLEYLEAGINILVSSSYQELSMEEGELLLEKSVKMEARDSFWDSVKS+   N ++  
Sbjct: 25  SSVHLEYLEAGINILVSSSYQELSMEEGELLLEKSVKMEARDSFWDSVKSIPGHNYNRAL 84

Query: 132 --------LKDFHRRRLQILVDASPDLLAFETIPNKLEAQLTNKHIVVYPNSGEVWDGRA 191
                   LKDFHRRRLQILVDASPDLLAFETIPNKLEAQLTNKHIVVYPNSGEVWDGRA
Sbjct: 85  LQHPLEAMLKDFHRRRLQILVDASPDLLAFETIPNKLEAQLTNKHIVVYPNSGEVWDGRA 144

Query: 192 KKWLPSNCFVDDKFESFSSRWRDLGAKFIGGCCRTTPSTILAISKVWKESSH 230
           KKWLPSNCFVDDKFESFSSRWRDLGAKFIGGCCRTTPSTILAISKVWKESSH
Sbjct: 145 KKWLPSNCFVDDKFESFSSRWRDLGAKFIGGCCRTTPSTILAISKVWKESSH 196

[Close]

BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: XP_004135092.1 (homocysteine S-methyltransferase 1 isoform X1 [Cucumis sativus] >KGN52080.1 hypothetical protein Csa_008676 [Cucumis sativus])

HSP 1 Score: 304 bits (778), Expect = 4.00e-100
Identity = 178/313 (56.87%), Postives = 186/313 (59.42%), Query Frame = 0


Query: 31  HGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSS 90
           H AGGCAVIDGGFATQLEKHGAVI+DPLWSAVCLI+D  LIKKVHLEYLEAG +ILVSSS
Sbjct: 15  HNAGGCAVIDGGFATQLEKHGAVINDPLWSAVCLINDPHLIKKVHLEYLEAGADILVSSS 74

Query: 91  YQE---------LSMEEGELLLEKSVKM--EARDSFWDSVK------------------- 150
           YQ          LS+EEGELLLEKSVK+  EARDSFWDSVK                   
Sbjct: 75  YQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGHKYNRALVAASIGSY 134

Query: 151 ----------------SVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ------ 210
                            VNVDKLKDFHRRRLQI VDASPDLLAFETIPNKLEAQ      
Sbjct: 135 GAYLADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQACVELL 194

Query: 211 ------------------------------------------------------------ 229
                                                                       
Sbjct: 195 EEENIQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGINCTPPHFIEALITKF 254

[Close]

BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: XP_008446599.1 (PREDICTED: homocysteine S-methyltransferase 1 [Cucumis melo])

HSP 1 Score: 303 bits (777), Expect = 5.67e-100
Identity = 177/314 (56.37%), Postives = 186/314 (59.24%), Query Frame = 0


Query: 31  HGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSS 90
           H AGGCAVIDGG ATQLEKHGAV +DPLWSAVCLI+D DLIKKVHLEYLEAG +ILV+SS
Sbjct: 15  HNAGGCAVIDGGLATQLEKHGAVFNDPLWSAVCLINDPDLIKKVHLEYLEAGADILVTSS 74

Query: 91  YQE---------LSMEEGELLLEKSVKM--EARDSFWDSVK------------------- 150
           YQ          LS+EEGELLLEKSVK+  EARDSFWDSVK                   
Sbjct: 75  YQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGHNYNRALVAASIGSY 134

Query: 151 ----------------SVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ------ 210
                            VNVDKLKDFHRRRL+ILVDASPDLLAFETIPNKLEAQ      
Sbjct: 135 GAYLADGSEYSGHYGPDVNVDKLKDFHRRRLRILVDASPDLLAFETIPNKLEAQACVELL 194

Query: 211 ------------------------------------------------------------ 230
                                                                       
Sbjct: 195 EEENVQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGINCTPPHFIEALITKF 254

[Close]

BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: XP_022150665.1 (homocysteine S-methyltransferase 1 [Momordica charantia])

HSP 1 Score: 300 bits (769), Expect = 9.27e-99
Identity = 177/311 (56.91%), Postives = 186/311 (59.81%), Query Frame = 0


Query: 33  AGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQ 92
           AGGCAVIDGGFATQLEKHGAVI+DPLWSAVCLI D DLIKKVHLEYLEAG +I+VSSSYQ
Sbjct: 17  AGGCAVIDGGFATQLEKHGAVINDPLWSAVCLIKDPDLIKKVHLEYLEAGADIVVSSSYQ 76

Query: 93  E---------LSMEEGELLLEKSVKM--EARDSFWDSVKS-------------------- 152
                     LS EEGELLLEKSVK+  EARDSFW+SVKS                    
Sbjct: 77  ATIPGFLSKGLSTEEGELLLEKSVKLAVEARDSFWNSVKSIPGHKYNRALVAASIGSYGA 136

Query: 153 ---------------VNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ-------- 212
                          VNVDKLKDFHRRRLQ+LV+A PDLLAFETIPNKLEAQ        
Sbjct: 137 YLADGSEYSGNYGPDVNVDKLKDFHRRRLQVLVNACPDLLAFETIPNKLEAQACVELLEE 196

Query: 213 ------------------------------------------------------------ 229
                                                                       
Sbjct: 197 ENVQIPSWICFSSVDGKNAPSGESFEECLRAINKSNKVNAVGINCTPPHFIEALICKFKE 256

[Close]

BLAST of Cp4.1LG01g13650 vs. ExPASy TrEMBL
Match: A0A0A0KR42 (Hcy-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609660 PE=4 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.94e-100
Identity = 178/313 (56.87%), Postives = 186/313 (59.42%), Query Frame = 0


Query: 31  HGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSS 90
           H AGGCAVIDGGFATQLEKHGAVI+DPLWSAVCLI+D  LIKKVHLEYLEAG +ILVSSS
Sbjct: 15  HNAGGCAVIDGGFATQLEKHGAVINDPLWSAVCLINDPHLIKKVHLEYLEAGADILVSSS 74

Query: 91  YQE---------LSMEEGELLLEKSVKM--EARDSFWDSVK------------------- 150
           YQ          LS+EEGELLLEKSVK+  EARDSFWDSVK                   
Sbjct: 75  YQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGHKYNRALVAASIGSY 134

Query: 151 ----------------SVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ------ 210
                            VNVDKLKDFHRRRLQI VDASPDLLAFETIPNKLEAQ      
Sbjct: 135 GAYLADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQACVELL 194

Query: 211 ------------------------------------------------------------ 229
                                                                       
Sbjct: 195 EEENIQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGINCTPPHFIEALITKF 254

[Close]

BLAST of Cp4.1LG01g13650 vs. ExPASy TrEMBL
Match: A0A1S3BEY1 (homocysteine S-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103489284 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 2.75e-100
Identity = 177/314 (56.37%), Postives = 186/314 (59.24%), Query Frame = 0


Query: 31  HGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSS 90
           H AGGCAVIDGG ATQLEKHGAV +DPLWSAVCLI+D DLIKKVHLEYLEAG +ILV+SS
Sbjct: 15  HNAGGCAVIDGGLATQLEKHGAVFNDPLWSAVCLINDPDLIKKVHLEYLEAGADILVTSS 74

Query: 91  YQE---------LSMEEGELLLEKSVKM--EARDSFWDSVK------------------- 150
           YQ          LS+EEGELLLEKSVK+  EARDSFWDSVK                   
Sbjct: 75  YQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGHNYNRALVAASIGSY 134

Query: 151 ----------------SVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ------ 210
                            VNVDKLKDFHRRRL+ILVDASPDLLAFETIPNKLEAQ      
Sbjct: 135 GAYLADGSEYSGHYGPDVNVDKLKDFHRRRLRILVDASPDLLAFETIPNKLEAQACVELL 194

Query: 211 ------------------------------------------------------------ 230
                                                                       
Sbjct: 195 EEENVQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGINCTPPHFIEALITKF 254

[Close]

BLAST of Cp4.1LG01g13650 vs. ExPASy TrEMBL
Match: A0A6J1D951 (homocysteine S-methyltransferase 1 OS=Momordica charantia OX=3673 GN=LOC111018744 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 4.49e-99
Identity = 177/311 (56.91%), Postives = 186/311 (59.81%), Query Frame = 0


Query: 33  AGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQ 92
           AGGCAVIDGGFATQLEKHGAVI+DPLWSAVCLI D DLIKKVHLEYLEAG +I+VSSSYQ
Sbjct: 17  AGGCAVIDGGFATQLEKHGAVINDPLWSAVCLIKDPDLIKKVHLEYLEAGADIVVSSSYQ 76

Query: 93  E---------LSMEEGELLLEKSVKM--EARDSFWDSVKS-------------------- 152
                     LS EEGELLLEKSVK+  EARDSFW+SVKS                    
Sbjct: 77  ATIPGFLSKGLSTEEGELLLEKSVKLAVEARDSFWNSVKSIPGHKYNRALVAASIGSYGA 136

Query: 153 ---------------VNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ-------- 212
                          VNVDKLKDFHRRRLQ+LV+A PDLLAFETIPNKLEAQ        
Sbjct: 137 YLADGSEYSGNYGPDVNVDKLKDFHRRRLQVLVNACPDLLAFETIPNKLEAQACVELLEE 196

Query: 213 ------------------------------------------------------------ 229
                                                                       
Sbjct: 197 ENVQIPSWICFSSVDGKNAPSGESFEECLRAINKSNKVNAVGINCTPPHFIEALICKFKE 256

[Close]

BLAST of Cp4.1LG01g13650 vs. ExPASy TrEMBL
Match: A0A6J1HZT4 (homocysteine S-methyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467714 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 6.87e-96
Identity = 173/312 (55.45%), Postives = 182/312 (58.33%), Query Frame = 0


Query: 33  AGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQ 92
           AGGCAVIDGG ATQLEKHGAV +D LWSAVCL+ D DLIKKVHLEYLEAG +ILVSSSYQ
Sbjct: 17  AGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEYLEAGADILVSSSYQ 76

Query: 93  E---------LSMEEGELLLEKSVKM--EARDSFWDSVKS-------------------- 152
                     LS EEGELLLE+SVK+  EARDSFWDSVKS                    
Sbjct: 77  ATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGHNYNRALVAASIGSYGA 136

Query: 153 ---------------VNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ-------- 212
                          V+VD LKDFHRRRLQILV ASPDLLAFETIPNKLEAQ        
Sbjct: 137 YLADGSEYSGHYGPDVDVDTLKDFHRRRLQILVGASPDLLAFETIPNKLEAQACVELLEE 196

Query: 213 ------------------------------------------------------------ 230
                                                                       
Sbjct: 197 ENVQILSWICFSSVDGENAPSGESFEECLQAINKSDKVNAVGINCTPPHFIEALICKFKE 256

[Close]

BLAST of Cp4.1LG01g13650 vs. ExPASy TrEMBL
Match: A0A6J1G1A5 (homocysteine S-methyltransferase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449762 PE=4 SV=1)

HSP 1 Score: 288 bits (737), Expect = 3.20e-94
Identity = 172/312 (55.13%), Postives = 180/312 (57.69%), Query Frame = 0


Query: 33  AGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQ 92
           AGGC VIDGG ATQLEKHGAV +D LWSAVCL+ D DLIKKVHLEYLEAG +ILVSSSYQ
Sbjct: 17  AGGCVVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEYLEAGSDILVSSSYQ 76

Query: 93  E---------LSMEEGELLLEKSVKM--EARDSFWDSVKS-------------------- 152
                     LS EEGELLLE+SVK+  EARDSFWDSVKS                    
Sbjct: 77  ATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGHNYNRALVAASIGSYGA 136

Query: 153 ---------------VNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ-------- 212
                          V+VD LK FHRRRLQILV ASPDLLAFETIPNKLEAQ        
Sbjct: 137 YLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFETIPNKLEAQACVELLEE 196

Query: 213 ------------------------------------------------------------ 230
                                                                       
Sbjct: 197 ENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGINCTPPHFIEALICKFKE 256

[Close]

BLAST of Cp4.1LG01g13650 vs. TAIR 10
Match: AT3G25900.3 (Homocysteine S-methyltransferase family protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-69
Identity = 149/295 (50.51%), Postives = 176/295 (59.66%), Query Frame = 0


Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLIKK      GGCAV+DGGFATQLE HGA I+DPLWSAV LI + +LIK+VH+EYLEAG
Sbjct: 12  DLIKK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSV------------ 142
            +I+V+SSYQ          LS+EE E LL+KSV++  EARD FW+ V            
Sbjct: 72  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRAL 131

Query: 143 -----------------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLE 202
                                  ++V++DKLKDFHRRRLQ+LV+A PDLLAFETIPNKLE
Sbjct: 132 VAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLE 191

Query: 203 AQ------------------------------------------------LTNKHIVVYP 224
           AQ                                                LT K IVVYP
Sbjct: 192 AQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYALTKKAIVVYP 251

[Close]

BLAST of Cp4.1LG01g13650 vs. TAIR 10
Match: AT3G25900.1 (Homocysteine S-methyltransferase family protein )

HSP 1 Score: 253.1 bits (645), Expect = 2.2e-67
Identity = 149/315 (47.30%), Postives = 176/315 (55.87%), Query Frame = 0


Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLIKK      GGCAV+DGGFATQLE HGA I+DPLWSAV LI + +LIK+VH+EYLEAG
Sbjct: 12  DLIKK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSV------------ 142
            +I+V+SSYQ          LS+EE E LL+KSV++  EARD FW+ V            
Sbjct: 72  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRAL 131

Query: 143 -----------------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLE 202
                                  ++V++DKLKDFHRRRLQ+LV+A PDLLAFETIPNKLE
Sbjct: 132 VAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLE 191

Query: 203 AQ---------------------------------------------------------- 224
           AQ                                                          
Sbjct: 192 AQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGINCAPPQF 251

[Close]

BLAST of Cp4.1LG01g13650 vs. TAIR 10
Match: AT3G22740.1 (homocysteine S-methyltransferase 3 )

HSP 1 Score: 185.3 bits (469), Expect = 5.6e-47
Identity = 119/312 (38.14%), Postives = 151/312 (48.40%), Query Frame = 0


Query: 34  GGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQE 93
           GG AV+DGGFAT+L++HGA I+DPLWSA CLI+   L+ KVHL+YLE+G NI++++SYQ 
Sbjct: 21  GGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQA 80

Query: 94  ---------LSMEEGELLLEKSVKM--EARDSF--------WDSV--------------- 153
                    LS+ E E LL +SV++  EAR+ F        WD                 
Sbjct: 81  TIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVAAS 140

Query: 154 -------------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEA--- 213
                               SV+ + LKDFHRRR+QIL  +  DL+AFETIPNKLEA   
Sbjct: 141 VGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAY 200

Query: 214 ------------------------------------------------------------ 225
                                                                       
Sbjct: 201 ADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSCKNVVAIGINCTAPRYIHAL 260

[Close]

BLAST of Cp4.1LG01g13650 vs. TAIR 10
Match: AT3G63250.1 (homocysteine methyltransferase 2 )

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-43
Identity = 109/309 (35.28%), Postives = 145/309 (46.93%), Query Frame = 0


Query: 34  GGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQE 93
           GG AVIDGG AT+ E+HGA ++DPLWSA CL++   LI  VHL+YLEAG +I+ S+SYQ 
Sbjct: 17  GGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQA 76

Query: 94  ---------LSMEEGELLLEKSVKM--EARDSFWDSV----------------------- 153
                     S EE E LL+KSV++  EAR+S++D                         
Sbjct: 77  TIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPILVAASVG 136

Query: 154 -----------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ---- 213
                             S+ ++KLKDFHRRRLQ+L ++  DL+AFETIPNK+EAQ    
Sbjct: 137 SYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFAD 196

Query: 214 ------------------------------------------------------------ 224
                                                                       
Sbjct: 197 LLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPPRFIEGLVL 256

[Close]

BLAST of Cp4.1LG01g13650 vs. TAIR 10
Match: AT3G25900.2 (Homocysteine S-methyltransferase family protein )

HSP 1 Score: 168.3 bits (425), Expect = 7.1e-42
Identity = 98/182 (53.85%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLIKK      GGCAV+DGGFATQLE HGA I+DPLWSAV LI + +LIK+VH+EYLEAG
Sbjct: 12  DLIKK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSV------------ 142
            +I+V+SSYQ          LS+EE E LL+KSV++  EARD FW+ V            
Sbjct: 72  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRAL 131

Query: 143 -----------------------KSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLE 159
                                  ++V++DKLKDFHRRRLQ+LV+A PDLLAFETIPNKLE
Sbjct: 132 VAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLE 188

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g13650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4ZGQ8	2.1e-67	47.94	Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN...	[more]
Q9SDL7	3.1e-66	47.30	Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HMT-1 PE=1...	[more]
Q9FUN0	1.4e-53	40.26	Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1	[more]
Q8LAX0	7.9e-46	38.14	Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HMT3 PE=1 ...	[more]
Q9M1W4	3.1e-42	35.28	Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1...	[more]

BLAST of Cp4.1LG01g13650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893227.1	2.60e-103	58.33	homocysteine S-methyltransferase 1 [Benincasa hispida]	[more]
XP_023550566.1	1.32e-101	88.95	homocysteine S-methyltransferase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_004135092.1	4.00e-100	56.87	homocysteine S-methyltransferase 1 isoform X1 [Cucumis sativus] >KGN52080.1 hypo...	[more]
XP_008446599.1	5.67e-100	56.37	PREDICTED: homocysteine S-methyltransferase 1 [Cucumis melo]	[more]
XP_022150665.1	9.27e-99	56.91	homocysteine S-methyltransferase 1 [Momordica charantia]	[more]

BLAST of Cp4.1LG01g13650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR42	1.94e-100	56.87	Hcy-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609660...	[more]
A0A1S3BEY1	2.75e-100	56.37	homocysteine S-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103489284 PE=4 ...	[more]
A0A6J1D951	4.49e-99	56.91	homocysteine S-methyltransferase 1 OS=Momordica charantia OX=3673 GN=LOC11101874...	[more]
A0A6J1HZT4	6.87e-96	55.45	homocysteine S-methyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A6J1G1A5	3.20e-94	55.13	homocysteine S-methyltransferase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449762...	[more]

BLAST of Cp4.1LG01g13650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25900.3	1.1e-69	50.51	Homocysteine S-methyltransferase family protein	[more]
AT3G25900.1	2.2e-67	47.30	Homocysteine S-methyltransferase family protein	[more]
AT3G22740.1	5.6e-47	38.14	homocysteine S-methyltransferase 3	[more]
AT3G63250.1	2.2e-43	35.28	homocysteine methyltransferase 2	[more]
AT3G25900.2	7.1e-42	53.85	Homocysteine S-methyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003726	Homocysteine-binding domain	PFAM	PF02574	S-methyl_trans	coord: 163..223 e-value: 2.5E-11 score: 44.0 coord: 38..159 e-value: 5.3E-19 score: 69.2
IPR036589	Homocysteine-binding domain superfamily	GENE3D	3.20.20.330		coord: 26..158 e-value: 4.2E-25 score: 90.7
IPR036589	Homocysteine-binding domain superfamily	GENE3D	3.20.20.330		coord: 159..230 e-value: 6.2E-16 score: 60.6
IPR036589	Homocysteine-binding domain superfamily	SUPERFAMILY	82282	Homocysteine S-methyltransferase	coord: 33..227
IPR017226	Betaine-homocysteine S-methyltransferase, BHMT	PIRSF	PIRSF037505	BHMT	coord: 25..137 e-value: 3.9E-5 score: 20.8 coord: 186..228 e-value: 0.42 score: 7.5
None	No IPR available	PANTHER	PTHR46015	ZGC:172121	coord: 121..158
None	No IPR available	PANTHER	PTHR46015:SF7	HOMOCYSTEINE S-METHYLTRANSFERASE 1	coord: 23..121 coord: 159..228 coord: 1..27
None	No IPR available	PANTHER	PTHR46015	ZGC:172121	coord: 159..228
None	No IPR available	PANTHER	PTHR46015	ZGC:172121	coord: 23..121 coord: 1..27
None	No IPR available	PANTHER	PTHR46015:SF7	HOMOCYSTEINE S-METHYLTRANSFERASE 1	coord: 121..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g13650.1	Cp4.1LG01g13650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009086	methionine biosynthetic process
molecular_function	GO:0047150	betaine-homocysteine S-methyltransferase activity
molecular_function	GO:0008270	zinc ion binding