Homology
BLAST of Cp4.1LG01g13070 vs. ExPASy Swiss-Prot
Match:
Q944S1 (DEAD-box ATP-dependent RNA helicase 22 OS=Arabidopsis thaliana OX=3702 GN=RH22 PE=2 SV=1)
HSP 1 Score: 594.7 bits (1532), Expect = 1.1e-168
Identity = 335/581 (57.66%), Postives = 414/581 (71.26%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASS--SKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGT 60
M+L RS S L+L ++SS SKLL + + S+ L L + K R
Sbjct: 1 MILSRSVSVLHLCGVSSSAPSKLLSQRFKVSFALAYGSSVSFRLSSLNRSDRKWVRGF-- 60
Query: 61 VAASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMS 120
ASA + G DTF+A VSW SLG+SDNVS AL +G RPSL QA C+PSI+S
Sbjct: 61 --ASATEAEVEKKGNDTFFADHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILS 120
Query: 121 GNDVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCE 180
G DV++AAETGSGKTHGYL P+I+++ N D ++T+ ++ + +SL+LCPNVMLCE
Sbjct: 121 GKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCE 180
Query: 181 QVVQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLC 240
QVV+M N L DE G LLRV VCG QGWP PDIIVSTPAALLN IEP R+RR++FL
Sbjct: 181 QVVRMVNGLVDEDGNPLLRVEAVCGSQGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLR 240
Query: 241 AVKHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSR-SKESPERLMELEAD-PSSQLT 300
VK+VVFDEADMLL GSFQN++IRLIN+LRF+EK +SR +K + R ME++A P L
Sbjct: 241 CVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQVSRLAKSNLGRPMEIDASVPQIDLE 300
Query: 301 LQDESDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQ 360
+D+++ + +ISE E E E EE D+ +++ E S K WRR +K Y RSKQ
Sbjct: 301 NEDDAEFDEGSISEEEDEEEEEEYLDDIAQMPSVE--AEAGSDTKKGWRRVRKIYTRSKQ 360
Query: 361 YIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIK 420
YIF+AATLPVNGKKTAG +L+ MF DA WVSG +LH +SPRL+Q+WVEVTVD+QVD LI+
Sbjct: 361 YIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQVDALIE 420
Query: 421 AVNQSKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILA 480
AV N + + RTMVFANTVE VEAVA+IL A +C+RYHK+ L+ER+ ILA
Sbjct: 421 AVK------NNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILA 480
Query: 481 DFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYT 540
DFRE GGV VCTDAAARGVD+PNV+HVIQADFA+SAVDFLHRIGRT RAGQ G VTS+YT
Sbjct: 481 DFRETGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYT 540
Query: 541 KANRDLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAK 578
+ANRDLV A+R A + QPVE AFSRKR FRNK+KK+ K
Sbjct: 541 EANRDLVEAIREAVKMGQPVETAFSRKRGFRNKVKKRAFLK 569
BLAST of Cp4.1LG01g13070 vs. ExPASy Swiss-Prot
Match:
Q6H601 (DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0383400 PE=2 SV=2)
HSP 1 Score: 555.1 bits (1429), Expect = 9.7e-157
Identity = 302/536 (56.34%), Postives = 386/536 (72.01%), Query Frame = 0
Query: 54 RAVGTVAASAATPVADGIG-RDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAAC 113
RA+ T AA A A G G D F++ E SW SLGVSD ++ AL AG+ RPSL+QAAC
Sbjct: 53 RALATAAAEADDAGAGGNGDGDGFFSEESTSWESLGVSDRLASALHGAGLARPSLVQAAC 112
Query: 114 VPSIMSGNDVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGD-QDLASIN-KLSLVL 173
+P +++ NDV++AAETGSGKTHGYLVPLI K+C+ + DG+ QD+ S + ++LVL
Sbjct: 113 IPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCS--KSISAEDGNSQDVTSGSPNIALVL 172
Query: 174 CPNVMLCEQVVQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYI---E 233
CPNVMLCEQVV+MAN+L DE G+ L VCG +GWP +PDI+V+TPAALLNY+ +
Sbjct: 173 CPNVMLCEQVVRMANSLVDESGEPLKSAAAVCGPKGWPTVRPDILVATPAALLNYLFDYD 232
Query: 234 PNRSRRMKFLCAVKHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMEL 293
P + RR +FL VK +VFDEADMLL GSF+N+VIRLI++LRF+EKLLSR ++S
Sbjct: 233 PEKRRRERFLRNVKFIVFDEADMLLCGSFENQVIRLIHMLRFDEKLLSRMEDS------- 292
Query: 294 EADPSSQLTLQDESDIETETISE-GEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRR 353
+++L D ++ ++ S+ E + EE+ D V + + + KDWRR
Sbjct: 293 ----GKEISLGDTNEYREDSDSQSAELSADDEENEDGLVQHRPVNVENAHIGAHKKDWRR 352
Query: 354 AQKSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVT 413
+K Y RSKQY+FVAATLP +GKKTAG VL++MFP+A WVSG YLH H+PRLE+RW+EVT
Sbjct: 353 VRKVYRRSKQYVFVAATLPQSGKKTAGGVLKRMFPNAVWVSGAYLHRHNPRLERRWIEVT 412
Query: 414 VDNQVDELIKAVNQS-KSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKD 473
D QV L+ AV K+++ + RTMVF NTV+ +V++IL G C YH+D
Sbjct: 413 ADTQVSALLDAVKYGLKNEVHDTKLGPNRTMVFTNTVDAANSVSDILQRVGVPCILYHRD 472
Query: 474 RSLEERSKILADFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRA 533
SLEER+K L FRENGGVLVCTDAAARG+D+PNV+HVIQA+FA AVDFLHR+GRT RA
Sbjct: 473 SSLEERAKNLQSFRENGGVLVCTDAAARGLDVPNVSHVIQAEFAACAVDFLHRVGRTARA 532
Query: 534 GQCGLVTSMYTKANRDLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVL 582
GQ G+VTS+YT+ANRDLV AVR+AE L+QPVE AFSRKRSFRNKLKKQ K + L
Sbjct: 533 GQSGIVTSLYTEANRDLVRAVRQAEELAQPVEKAFSRKRSFRNKLKKQALHKSTAL 575
BLAST of Cp4.1LG01g13070 vs. ExPASy Swiss-Prot
Match:
Q53RK8 (DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0708600 PE=2 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 2.2e-28
Identity = 127/466 (27.25%), Postives = 204/466 (43.78%), Query Frame = 0
Query: 84 WTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLINK 143
W+ + + RA+ AG + PS IQ A +P + DV+ AETGSGKT +++P+++
Sbjct: 317 WSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSY 376
Query: 144 ICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTTVCG 203
I +L ++ + ++V+ P L +Q+ + G ++V ++ G
Sbjct: 377 I------TRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFATYLG---IKVVSIVG 436
Query: 204 -----RQGWPVYKP-DIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVFDEADMLLVGSFQ 263
QG+ + + +++++TP LL+ +E RR L +VV DEAD ++ F+
Sbjct: 437 GQSIEEQGFKIRQGCEVVIATPGRLLDCLE----RRYAVLNQCNYVVLDEADRMIDMGFE 496
Query: 264 NKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDESDIETETISEGEGEGEG 323
+V+ + L+A PSS L ++E
Sbjct: 497 PQVVGV-----------------------LDAMPSSNLKPENE----------------- 556
Query: 324 EESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLPVNGKKTAGAVLR 383
DE++D+ I T Y+F +AT+P ++ A LR
Sbjct: 557 ----DEELDAKTIYRTT----------------------YMF-SATMPPAVERLARKYLR 616
Query: 384 KMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGSAIRTMV 443
+GK + L + V +T +++ S+ Q D +V
Sbjct: 617 NPVVVTIGTAGK-----ATDLITQNVIMTKESE--------KMSRLQKILTDLGDKPAIV 676
Query: 444 FANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRENG-GVLVCTDAAARGVD 503
F NT ++ +A A L AG H +S E+R L FR VLV TD A RG+D
Sbjct: 677 FCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSLDGFRNRRFTVLVATDVAGRGID 689
Query: 504 IPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDL 543
IP+VAHVI + +S + HRIGRTGRAG+ GL TS T N D+
Sbjct: 737 IPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTDI 689
BLAST of Cp4.1LG01g13070 vs. ExPASy Swiss-Prot
Match:
Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)
HSP 1 Score: 125.2 bits (313), Expect = 2.5e-27
Identity = 125/491 (25.46%), Postives = 205/491 (41.75%), Query Frame = 0
Query: 83 SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
S+ LG+ + V AL GI +P+ IQ VP++++G VV+ + TGSGKT YL+PL+
Sbjct: 111 SFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQ 170
Query: 143 KICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTTVC 202
+ +RD+ + + ++VLCP L EQV ++A ++ H + R T V
Sbjct: 171 LL---RRDEAML--GMSMKPRRPRAVVLCPTRELTEQVFRVAKSI-SHHAR--FRSTMVS 230
Query: 203 GRQ---------GWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVFDEADMLLV 262
G PV D++V TP +L++I+ +K++V DEAD +
Sbjct: 231 GGSRIRPQEDSLNMPV---DMVVGTPGRILDHIKDGN----MVYGDIKYLVLDEADTMFD 290
Query: 263 GSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDESDIETETISEGEG 322
F + + + L+
Sbjct: 291 QGFGPDIRKFLAPLK--------------------------------------------- 350
Query: 323 EGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLPVNGKKTAG 382
RA K ++ Q + V AT+ K
Sbjct: 351 -------------------------------NRAAKPGDQGFQTVLVTATM----TKAVQ 410
Query: 383 AVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGSAI 442
++ + F +H + ++R T + +L + N+ ++ L+ ++ S
Sbjct: 411 KLIDEEFEG-------IVHLRTTTFQKR--VATARHDFIKLSGSENKLEALLQVLEPSLA 470
Query: 443 ---RTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRENGG---VLVC 502
+ MVF NT+ + AV + L+ YH + EER + L FR G LVC
Sbjct: 471 KGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVC 496
Query: 503 TDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVR 559
TD AARG+D+ +V HVI DF ++++D+LHR GRT R G G VTS+ K + L +
Sbjct: 531 TDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIE 496
BLAST of Cp4.1LG01g13070 vs. ExPASy Swiss-Prot
Match:
Q9Y7T7 (Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp28 PE=3 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 3.2e-27
Identity = 122/472 (25.85%), Postives = 195/472 (41.31%), Query Frame = 0
Query: 83 SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
+W G+ + + L + PS IQ A +P ++ D++ AETGSGKT +++PLI
Sbjct: 250 NWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLII 309
Query: 143 KICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTTVC 202
I KL + + ++VL P L +Q+ N + G R +V
Sbjct: 310 AI------SKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLG---FRCVSVV 369
Query: 203 GRQGWPVYK------PDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVFDEADMLLVGSF 262
G + I+V+TP LL+ +E RR+ L +VV DEAD +L F
Sbjct: 370 GGHAFEEQSFQMSQGAHIVVATPGRLLDCLE----RRLFVLSQCTYVVMDEADRMLDMGF 429
Query: 263 QNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDESDIETETISEGEGEGE 322
++ V ++++ L PSS + +D S + T S
Sbjct: 430 EDDVNKILSSL-----------------------PSSNASEKDGSILATANSS------- 489
Query: 323 GEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLPVNGKKTAGAVL 382
SSRR Q I +ATLP A + L
Sbjct: 490 --------------------SSRR---------------QTIMFSATLPPRVANLAKSYL 549
Query: 383 RKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGSAIRTM 442
+ G+ + R+EQR ++ D++ ++ + +S I +
Sbjct: 550 IEPVMLTIGNIGQAV----DRVEQRVEMISDDSKKWRRVEEILESNRFSPPI-------I 609
Query: 443 VFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFR-ENGGVLVCTDAAARGV 502
+F N +EA+A L+ G H +S E+R + + R + +LV TD A RG+
Sbjct: 610 IFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGI 632
Query: 503 DIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVR 548
DIPNV+ V+ + A S D+ HRIGRTGRAG+ G + + D+ +R
Sbjct: 670 DIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLR 632
BLAST of Cp4.1LG01g13070 vs. NCBI nr
Match:
XP_023549678.1 (DEAD-box ATP-dependent RNA helicase 22 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1115 bits (2885), Expect = 0.0
Identity = 582/582 (100.00%), Postives = 582/582 (100.00%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA
Sbjct: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
Query: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV
Sbjct: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
Query: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
Query: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE
Sbjct: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR
Sbjct: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
Query: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS
Sbjct: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
BLAST of Cp4.1LG01g13070 vs. NCBI nr
Match:
KAG6601380.1 (DEAD-box ATP-dependent RNA helicase 22, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1091 bits (2822), Expect = 0.0
Identity = 573/582 (98.45%), Postives = 574/582 (98.63%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLR+PCSKQSRAVGTVA
Sbjct: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKICNEQRD GDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRD-----GDQDLASINKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMANTLCDEHGKSLLRVT VCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEAD SSQLTLQDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADASSQLTLQDE 300
Query: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV
Sbjct: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
Query: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
Query: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
SKSQLRNIDG AIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE
Sbjct: 421 SKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR
Sbjct: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
Query: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS
Sbjct: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 577
BLAST of Cp4.1LG01g13070 vs. NCBI nr
Match:
XP_022956592.1 (DEAD-box ATP-dependent RNA helicase 22 [Cucurbita moschata])
HSP 1 Score: 1091 bits (2821), Expect = 0.0
Identity = 572/582 (98.28%), Postives = 574/582 (98.63%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLR+PCSKQSRAVGTVA
Sbjct: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAATPVADGIGRDTFYAAEG+SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61 ASAATPVADGIGRDTFYAAEGISWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKICNEQRD GDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRD-----GDQDLASINKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMANTLCDEHGKSLLRVT VCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEAD SSQLTLQDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADASSQLTLQDE 300
Query: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV
Sbjct: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
Query: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
Query: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
SKSQLRNIDG AIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE
Sbjct: 421 SKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR
Sbjct: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
Query: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS
Sbjct: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 577
BLAST of Cp4.1LG01g13070 vs. NCBI nr
Match:
XP_022997352.1 (DEAD-box ATP-dependent RNA helicase 22 [Cucurbita maxima])
HSP 1 Score: 1085 bits (2807), Expect = 0.0
Identity = 567/582 (97.42%), Postives = 572/582 (98.28%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA
Sbjct: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAATP ADGIGRDTFYAAEGVSWTSLGVSDNVSR+LVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61 ASAATPAADGIGRDTFYAAEGVSWTSLGVSDNVSRSLVSAGIQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMANTLCDEHGKSLLRVT VCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
Query: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
SDIETETISEGEGEGEGEESY EDVDSNNIQ+KTEYSS RVKDWRRAQKSYERSKQYIFV
Sbjct: 301 SDIETETISEGEGEGEGEESY-EDVDSNNIQDKTEYSSGRVKDWRRAQKSYERSKQYIFV 360
Query: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQ DELI+AVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQADELIEAVNQ 420
Query: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
SK+QLRNID AIRTMVFANTVETVEAVANIL VAGTECFRYHKDRSLEERSKILADFRE
Sbjct: 421 SKAQLRNIDDGAIRTMVFANTVETVEAVANILLVAGTECFRYHKDRSLEERSKILADFRE 480
Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
GGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR
Sbjct: 481 KGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
Query: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
DLVAA+RRAENLSQPVEAAFSRKRSFRNKLKKQGS KESVLS
Sbjct: 541 DLVAAIRRAENLSQPVEAAFSRKRSFRNKLKKQGSGKESVLS 581
BLAST of Cp4.1LG01g13070 vs. NCBI nr
Match:
XP_038892424.1 (DEAD-box ATP-dependent RNA helicase 22 [Benincasa hispida])
HSP 1 Score: 989 bits (2557), Expect = 0.0
Identity = 515/585 (88.03%), Postives = 549/585 (93.85%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRSAS L+LERLA SSKLLFS KN NLLVP+SCSIRIGLVCLRQPCS+QSRAVGTVA
Sbjct: 1 MLLYRSASVLHLERLALSSKLLFSLKNYNLLVPNSCSIRIGLVCLRQPCSRQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAA+ ADGIG+DTFYAAEGVSWTSLGVSDNVSRALVSAG+QRPSLIQAACVPSIMSGN
Sbjct: 61 ASAASTAADGIGKDTFYAAEGVSWTSLGVSDNVSRALVSAGMQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKIC+E +DKLTDGDQDLAS NKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICSEHGEDKLTDGDQDLASFNKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMAN+LCDEHGKSLLRVT VCGRQGWP++KPDI+VSTPAALLNYIEPNR RR +FL AV
Sbjct: 181 VQMANSLCDEHGKSLLRVTAVCGRQGWPIHKPDIVVSTPAALLNYIEPNRIRRSEFLRAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRS+ESPE LMELEA P SQL +QDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSRESPEGLMELEAGPLSQLIVQDE 300
Query: 301 SDIETETISEGEGEGEGEESYDE---DVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQY 360
+D++TETI EGEGEGEGEE +E +VDSNNIQE+TE S R+ DWRR +KSY+RSKQY
Sbjct: 301 NDLQTETIPEGEGEGEGEEDGEESCTEVDSNNIQEETECVSGRINDWRRVRKSYKRSKQY 360
Query: 361 IFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKA 420
IFVAATLPVNGKKTAGAVLRKM+PDASWVSGKYLHCH+PRLEQRWVEVT+DNQVDELIKA
Sbjct: 361 IFVAATLPVNGKKTAGAVLRKMYPDASWVSGKYLHCHNPRLEQRWVEVTLDNQVDELIKA 420
Query: 421 VNQSKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILAD 480
VNQSKSQLRN DGSA+RTMVFANTVETVEAVANIL AG ECFRYHKDRSLEERSKILAD
Sbjct: 421 VNQSKSQLRNSDGSAVRTMVFANTVETVEAVANILQGAGKECFRYHKDRSLEERSKILAD 480
Query: 481 FRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTK 540
FRE GGV VCTDAAARGVDIPNV+HVIQADFATSAVDFLHRIGRTGRAGQ GLVTS+YTK
Sbjct: 481 FREKGGVFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTGRAGQYGLVTSLYTK 540
Query: 541 ANRDLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
AN DLV+AVRRAENLSQPVEAAFSRKRSFRNKLKKQGS+KESV++
Sbjct: 541 ANCDLVSAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSSKESVMA 585
BLAST of Cp4.1LG01g13070 vs. ExPASy TrEMBL
Match:
A0A6J1GWS3 (DEAD-box ATP-dependent RNA helicase 22 OS=Cucurbita moschata OX=3662 GN=LOC111458282 PE=4 SV=1)
HSP 1 Score: 1091 bits (2821), Expect = 0.0
Identity = 572/582 (98.28%), Postives = 574/582 (98.63%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLR+PCSKQSRAVGTVA
Sbjct: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAATPVADGIGRDTFYAAEG+SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61 ASAATPVADGIGRDTFYAAEGISWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKICNEQRD GDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRD-----GDQDLASINKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMANTLCDEHGKSLLRVT VCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEAD SSQLTLQDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADASSQLTLQDE 300
Query: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV
Sbjct: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
Query: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
Query: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
SKSQLRNIDG AIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE
Sbjct: 421 SKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR
Sbjct: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
Query: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS
Sbjct: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 577
BLAST of Cp4.1LG01g13070 vs. ExPASy TrEMBL
Match:
A0A6J1K4R5 (DEAD-box ATP-dependent RNA helicase 22 OS=Cucurbita maxima OX=3661 GN=LOC111492263 PE=4 SV=1)
HSP 1 Score: 1085 bits (2807), Expect = 0.0
Identity = 567/582 (97.42%), Postives = 572/582 (98.28%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA
Sbjct: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAATP ADGIGRDTFYAAEGVSWTSLGVSDNVSR+LVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61 ASAATPAADGIGRDTFYAAEGVSWTSLGVSDNVSRSLVSAGIQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMANTLCDEHGKSLLRVT VCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
Query: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
SDIETETISEGEGEGEGEESY EDVDSNNIQ+KTEYSS RVKDWRRAQKSYERSKQYIFV
Sbjct: 301 SDIETETISEGEGEGEGEESY-EDVDSNNIQDKTEYSSGRVKDWRRAQKSYERSKQYIFV 360
Query: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQ DELI+AVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQADELIEAVNQ 420
Query: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
SK+QLRNID AIRTMVFANTVETVEAVANIL VAGTECFRYHKDRSLEERSKILADFRE
Sbjct: 421 SKAQLRNIDDGAIRTMVFANTVETVEAVANILLVAGTECFRYHKDRSLEERSKILADFRE 480
Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
GGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR
Sbjct: 481 KGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
Query: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
DLVAA+RRAENLSQPVEAAFSRKRSFRNKLKKQGS KESVLS
Sbjct: 541 DLVAAIRRAENLSQPVEAAFSRKRSFRNKLKKQGSGKESVLS 581
BLAST of Cp4.1LG01g13070 vs. ExPASy TrEMBL
Match:
A0A5A7SV31 (DEAD-box ATP-dependent RNA helicase 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00700 PE=4 SV=1)
HSP 1 Score: 974 bits (2519), Expect = 0.0
Identity = 515/600 (85.83%), Postives = 544/600 (90.67%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRS SAL+LERL SSKLLFSFKNSNLLVP+SCSIRIGLVCL+QPCS+QSRAVGTVA
Sbjct: 1 MLLYRSVSALHLERLKLSSKLLFSFKNSNLLVPNSCSIRIGLVCLKQPCSRQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAA+ ADGIG+DTFYAAEGVSWTSLGVSD VSRAL S G+QRPSLIQAACVPSIMSGN
Sbjct: 61 ASAASTAADGIGKDTFYAAEGVSWTSLGVSDTVSRALGSVGMQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKIC+E +DKLTDGDQDLAS+NKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICSEHGEDKLTDGDQDLASLNKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMAN LCDEHGKSLLRVT +CGRQGWPV+KPDI+VSTPAALLNYIEPNRSRR FL AV
Sbjct: 181 VQMANALCDEHGKSLLRVTAICGRQGWPVHKPDIVVSTPAALLNYIEPNRSRRSAFLRAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKE PERLMELEADP SQL +QDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKEFPERLMELEADPLSQLIVQDE 300
Query: 301 SDIETETISEGEGE------------------GEGEESYDEDVDSNNIQEKTEYSSRRVK 360
D++TET SEGEGE GEGEESY+E V+SNNIQ++TE S +VK
Sbjct: 301 DDLQTETTSEGEGEKEEEGEEEGEGEEEGEGEGEGEESYNE-VESNNIQDETECVSGKVK 360
Query: 361 DWRRAQKSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRW 420
WRR +KSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCH+PRLEQRW
Sbjct: 361 HWRRVRKSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHNPRLEQRW 420
Query: 421 VEVTVDNQVDELIKAVNQSKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRY 480
VEV+ DNQVDELIKAVNQSKSQLR D IRTMVFANTVETVEAVANIL AG ECFRY
Sbjct: 421 VEVSTDNQVDELIKAVNQSKSQLRVPDDGVIRTMVFANTVETVEAVANILLGAGKECFRY 480
Query: 481 HKDRSLEERSKILADFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRT 540
HKDRSLEERSKILADFRE GGV VCTDAAARGVDIPNV+HVIQADFATSAVDFLHRIGRT
Sbjct: 481 HKDRSLEERSKILADFREEGGVFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRT 540
Query: 541 GRAGQCGLVTSMYTKANRDLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
GRAGQ GLVTS+YTKANRDLV+AVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESV++
Sbjct: 541 GRAGQRGLVTSLYTKANRDLVSAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVMA 599
BLAST of Cp4.1LG01g13070 vs. ExPASy TrEMBL
Match:
A0A1S3BFF8 (DEAD-box ATP-dependent RNA helicase 22 OS=Cucumis melo OX=3656 GN=LOC103489039 PE=4 SV=1)
HSP 1 Score: 974 bits (2519), Expect = 0.0
Identity = 515/600 (85.83%), Postives = 544/600 (90.67%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRS SAL+LERL SSKLLFSFKNSNLLVP+SCSIRIGLVCL+QPCS+QSRAVGTVA
Sbjct: 1 MLLYRSVSALHLERLKLSSKLLFSFKNSNLLVPNSCSIRIGLVCLKQPCSRQSRAVGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
ASAA+ ADGIG+DTFYAAEGVSWTSLGVSD VSRAL S G+QRPSLIQAACVPSIMSGN
Sbjct: 61 ASAASTAADGIGKDTFYAAEGVSWTSLGVSDTVSRALGSVGMQRPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLINKIC+E +DKLTDGDQDLAS+NKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICSEHGEDKLTDGDQDLASLNKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMAN LCDEHGKSLLRVT +CGRQGWPV+KPDI+VSTPAALLNYIEPNRSRR FL AV
Sbjct: 181 VQMANALCDEHGKSLLRVTAICGRQGWPVHKPDIVVSTPAALLNYIEPNRSRRSAFLRAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKE PERLMELEADP SQL +QDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKEFPERLMELEADPLSQLIVQDE 300
Query: 301 SDIETETISEGEGE------------------GEGEESYDEDVDSNNIQEKTEYSSRRVK 360
D++TET SEGEGE GEGEESY+E V+SNNIQ++TE S +VK
Sbjct: 301 DDLQTETTSEGEGEKEEEGEEEGEGEEEGEGEGEGEESYNE-VESNNIQDETECVSGKVK 360
Query: 361 DWRRAQKSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRW 420
WRR +KSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCH+PRLEQRW
Sbjct: 361 HWRRVRKSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHNPRLEQRW 420
Query: 421 VEVTVDNQVDELIKAVNQSKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRY 480
VEV+ DNQVDELIKAVNQSKSQLR D IRTMVFANTVETVEAVANIL AG ECFRY
Sbjct: 421 VEVSTDNQVDELIKAVNQSKSQLRVPDDGVIRTMVFANTVETVEAVANILLGAGKECFRY 480
Query: 481 HKDRSLEERSKILADFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRT 540
HKDRSLEERSKILADFRE GGV VCTDAAARGVDIPNV+HVIQADFATSAVDFLHRIGRT
Sbjct: 481 HKDRSLEERSKILADFREEGGVFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRT 540
Query: 541 GRAGQCGLVTSMYTKANRDLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
GRAGQ GLVTS+YTKANRDLV+AVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESV++
Sbjct: 541 GRAGQRGLVTSLYTKANRDLVSAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVMA 599
BLAST of Cp4.1LG01g13070 vs. ExPASy TrEMBL
Match:
A0A6J1DBC8 (DEAD-box ATP-dependent RNA helicase 22 OS=Momordica charantia OX=3673 GN=LOC111019135 PE=4 SV=1)
HSP 1 Score: 974 bits (2517), Expect = 0.0
Identity = 509/582 (87.46%), Postives = 542/582 (93.13%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60
MLLYRSASAL+LERLA SKLLFSFKN N LV +SCSIRIGLV LRQ CS++SRA GTVA
Sbjct: 1 MLLYRSASALHLERLALPSKLLFSFKNYNSLVSTSCSIRIGLVSLRQRCSEKSRAAGTVA 60
Query: 61 ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
AS A+ A+G GRDTF+AAEGVSWTSLGVSDNVSRALVS+GIQ PSLIQAACVPSIMSGN
Sbjct: 61 ASTASTAAEGTGRDTFFAAEGVSWTSLGVSDNVSRALVSSGIQMPSLIQAACVPSIMSGN 120
Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180
DVVIAAETGSGKTHGYLVPLIN+IC+E D+KLT DQDLAS NKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINRICSEHGDNKLTGSDQDLASFNKLSLVLCPNVMLCEQV 180
Query: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
VQMANTLCDEHGKSLLRVT VCGRQGWP+++PDIIVSTPAALLNYIEPNRSRR+ FL AV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPIHEPDIIVSTPAALLNYIEPNRSRRLDFLRAV 240
Query: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300
KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESP+RL+ELEADPSS+L LQDE
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPKRLVELEADPSSELILQDE 300
Query: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360
+D++TETISEGE +GEGEESY+EDVDSN+IQE+TE S RVKDWRR +K YERSKQYIFV
Sbjct: 301 NDLQTETISEGEEDGEGEESYEEDVDSNDIQEQTESVSGRVKDWRRVRKFYERSKQYIFV 360
Query: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420
AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEV++DNQVDELIKAVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVSLDNQVDELIKAVNQ 420
Query: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480
KS+ RN DG AIRTMVFANTVETVEAV N+L AG ECFRYHKDRSLEERSKILADFRE
Sbjct: 421 PKSKQRNPDGGAIRTMVFANTVETVEAVDNVLLRAGIECFRYHKDRSLEERSKILADFRE 480
Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540
GGV VCTDAAARGVDIPNV+HVIQADFATSAVDFLHRIGRTGRAGQ GLVTS+YTKANR
Sbjct: 481 KGGVFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTGRAGQYGLVTSLYTKANR 540
Query: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESVLS 582
DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKES L+
Sbjct: 541 DLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAKESALA 582
BLAST of Cp4.1LG01g13070 vs. TAIR 10
Match:
AT1G59990.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 594.7 bits (1532), Expect = 7.8e-170
Identity = 335/581 (57.66%), Postives = 414/581 (71.26%), Query Frame = 0
Query: 1 MLLYRSASALYLERLASS--SKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGT 60
M+L RS S L+L ++SS SKLL + + S+ L L + K R
Sbjct: 1 MILSRSVSVLHLCGVSSSAPSKLLSQRFKVSFALAYGSSVSFRLSSLNRSDRKWVRGF-- 60
Query: 61 VAASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMS 120
ASA + G DTF+A VSW SLG+SDNVS AL +G RPSL QA C+PSI+S
Sbjct: 61 --ASATEAEVEKKGNDTFFADHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILS 120
Query: 121 GNDVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCE 180
G DV++AAETGSGKTHGYL P+I+++ N D ++T+ ++ + +SL+LCPNVMLCE
Sbjct: 121 GKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCE 180
Query: 181 QVVQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLC 240
QVV+M N L DE G LLRV VCG QGWP PDIIVSTPAALLN IEP R+RR++FL
Sbjct: 181 QVVRMVNGLVDEDGNPLLRVEAVCGSQGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLR 240
Query: 241 AVKHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSR-SKESPERLMELEAD-PSSQLT 300
VK+VVFDEADMLL GSFQN++IRLIN+LRF+EK +SR +K + R ME++A P L
Sbjct: 241 CVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQVSRLAKSNLGRPMEIDASVPQIDLE 300
Query: 301 LQDESDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQ 360
+D+++ + +ISE E E E EE D+ +++ E S K WRR +K Y RSKQ
Sbjct: 301 NEDDAEFDEGSISEEEDEEEEEEYLDDIAQMPSVE--AEAGSDTKKGWRRVRKIYTRSKQ 360
Query: 361 YIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIK 420
YIF+AATLPVNGKKTAG +L+ MF DA WVSG +LH +SPRL+Q+WVEVTVD+QVD LI+
Sbjct: 361 YIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQVDALIE 420
Query: 421 AVNQSKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILA 480
AV N + + RTMVFANTVE VEAVA+IL A +C+RYHK+ L+ER+ ILA
Sbjct: 421 AVK------NNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILA 480
Query: 481 DFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYT 540
DFRE GGV VCTDAAARGVD+PNV+HVIQADFA+SAVDFLHRIGRT RAGQ G VTS+YT
Sbjct: 481 DFRETGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYT 540
Query: 541 KANRDLVAAVRRAENLSQPVEAAFSRKRSFRNKLKKQGSAK 578
+ANRDLV A+R A + QPVE AFSRKR FRNK+KK+ K
Sbjct: 541 EANRDLVEAIREAVKMGQPVETAFSRKRGFRNKVKKRAFLK 569
BLAST of Cp4.1LG01g13070 vs. TAIR 10
Match:
AT2G33730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 121.3 bits (303), Expect = 2.5e-27
Identity = 120/461 (26.03%), Postives = 196/461 (42.52%), Query Frame = 0
Query: 83 SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
SW ++ + +A+ AG ++PS IQ A +P + DV+ AETGSGKT +++P++
Sbjct: 314 SWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLA 373
Query: 143 KICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTTVC 202
I +L ++ + ++V+ P L +Q+ + G RVT++
Sbjct: 374 YI------SRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLG---FRVTSIV 433
Query: 203 G-----RQGWPVYKP-DIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVFDEADMLLVGSF 262
G QG + + +I+++TP L++ +E RR L +VV DEAD ++ F
Sbjct: 434 GGQSIEEQGLKITQGCEIVIATPGRLIDCLE----RRYAVLNQCNYVVLDEADRMIDMGF 493
Query: 263 QNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDESDIETETISEGEGEGE 322
+ +V + L+A PSS L ++E
Sbjct: 494 EPQVAGV-----------------------LDAMPSSNLKPENE---------------- 553
Query: 323 GEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLPVNGKKTAGAVL 382
+E++D I T Y+F +AT+P ++ A L
Sbjct: 554 -----EEELDEKKIYRTT----------------------YMF-SATMPPGVERLARKYL 613
Query: 383 RKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGSAIRTM 442
R +GK + + Q + + + L K +++ + +
Sbjct: 614 RNPVVVTIGTAGK----TTDLISQHVIMMKESEKFFRLQKLLDELGEK---------TAI 673
Query: 443 VFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFR-ENGGVLVCTDAAARGV 502
VF NT + +++A L AG H +S E+R L FR + VLV TD RG+
Sbjct: 674 VFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGI 681
Query: 503 DIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYT 537
DIP+VAHVI D + HRIGRTGRAG+ G+ TS T
Sbjct: 734 DIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLT 681
BLAST of Cp4.1LG01g13070 vs. TAIR 10
Match:
AT4G09730.1 (RH39 )
HSP 1 Score: 117.1 bits (292), Expect = 4.8e-26
Identity = 115/485 (23.71%), Postives = 207/485 (42.68%), Query Frame = 0
Query: 83 SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
++ LG+S+ V AL I+ P+ IQ +P++M VV+ + TGSGKT YL+P++
Sbjct: 113 NFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQ 172
Query: 143 KICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTTVC 202
+ R+D+ G + ++VLCP L EQV ++A ++ H +
Sbjct: 173 LM----REDEANLGKKTKPR-RPRTVVLCPTRELSEQVYRVAKSI--SHHARFRSILVSG 232
Query: 203 GRQGWPVYKP-----DIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVFDEADMLLVGSFQ 262
G + P D++V TP +L +IE + ++V DEAD + F
Sbjct: 233 GSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGN----MVYGDIAYLVLDEADTMFDRGFG 292
Query: 263 NKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDESDIETETISEGEGEGEG 322
++ + + L
Sbjct: 293 PEIRKFLAPLN------------------------------------------------- 352
Query: 323 EESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLPVNGKKTAGAVLR 382
+RA K+ ++ Q + V AT+ + +K ++
Sbjct: 353 ---------------------------QRALKTNDQGFQTVLVTATMTMAVQK----LVD 412
Query: 383 KMFPDASWVSGKYLHCHSPRLEQRWVEVT-VDNQVDELIKAVNQSKSQLRNIDGSAIRTM 442
+ F + LH +++++ +++++ L++ + S ++ GS + M
Sbjct: 413 EEFQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVLEPSLAK-----GS--KVM 472
Query: 443 VFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRENGG---VLVCTDAAAR 502
VF NT+ + AV + LS YH + E+R + L F++ G LVCTD AAR
Sbjct: 473 VFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAAR 498
Query: 503 GVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRAENLS 559
G+D+ +V HV+ DF +++D+LHR GRT R G G VTS+ ++ ++ L A + A +
Sbjct: 533 GLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNN 498
BLAST of Cp4.1LG01g13070 vs. TAIR 10
Match:
AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 111.3 bits (277), Expect = 2.6e-24
Identity = 119/493 (24.14%), Postives = 195/493 (39.55%), Query Frame = 0
Query: 83 SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
S+ +G D V + AG P+ IQ+ P M G D++ AETGSGKT YL+P I
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
Query: 143 KICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTTVC 202
+ L GD + LVL P L Q+ Q A+ S ++ T C
Sbjct: 160 HV---NAQPMLAHGD------GPIVLVLAPTRELAVQIQQEASKF-----GSSSKIKTTC 219
Query: 203 GRQGWPVYKP--------DIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVFDEADMLLVG 262
G P +I+++TP L++ +E N + L V ++V DEAD +L
Sbjct: 220 IYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTN----LRRVTYLVLDEADRMLDM 279
Query: 263 SFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDESDIETETISEGEGE 322
F ++ ++++ +R + + L S P+ + +L
Sbjct: 280 GFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQL--------------------------- 339
Query: 323 GEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLPVNGKKTAGA 382
SK++++ + +
Sbjct: 340 ---------------------------------------SKKFLYNPYKVIIGSSDLKAN 399
Query: 383 VLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGSAIR 442
+ D S KY N++ +L++ + +DGS R
Sbjct: 400 RAIRQIVDVISESQKY------------------NKLVKLLEDI---------MDGS--R 459
Query: 443 TMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE-NGGVLVCTDAAAR 502
+VF +T + + + L + G H D+S ER +L++FR ++ TD AAR
Sbjct: 460 ILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAR 479
Query: 503 GVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKAN----RDLVAAVRRA 562
G+D+ +V +VI DF S D++HRIGRTGRAG G + +T AN ++L ++ A
Sbjct: 520 GLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEA 479
BLAST of Cp4.1LG01g13070 vs. TAIR 10
Match:
AT3G58570.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 107.5 bits (267), Expect = 3.8e-23
Identity = 107/445 (24.04%), Postives = 182/445 (40.90%), Query Frame = 0
Query: 104 RPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASI 163
+P+ +Q +P + +G D++ A+TGSGKT + P+I+ I +Q ++ + + +
Sbjct: 168 KPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIER----PRGVRGV 227
Query: 164 NKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTTVCGRQGWPVYKP--------DII 223
L+++L P L Q+ A + G V V G PV + DI+
Sbjct: 228 YPLAVILSPTRELACQIHDEARKFSYQTG-----VKVVVAYGGTPVNQQIRELERGVDIL 287
Query: 224 VSTPAALLNYIEPNRSRRMKFLCAVKHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLS 283
V+TP L + +E R L V+ + DEAD +L F+ ++ +++ +
Sbjct: 288 VATPGRLNDLLERGRVS----LQMVRFLALDEADRMLDMGFEPQIRKIVQQM-------- 347
Query: 284 RSKESPERLMELEADPSSQLTLQDESDIETETISEGEGEGEGEESYDEDVDSNNIQEKTE 343
D+ +++
Sbjct: 348 ------------------------------------------------DMPPPGVRQTML 407
Query: 344 YSSRRVKDWRRAQKSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHS 403
+S+ ++ +R + YIF+A G T V R +++H
Sbjct: 408 FSATFPREIQRLASDF--LSNYIFLAVGRV--GSSTDLIVQRV----------EFVHDSD 467
Query: 404 PRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGSAIRTMVFANTVETVEAVANILSVA 463
R + + +L+ A ++ +Q G T+VF T + +++ N L +
Sbjct: 468 KR-----------SHLMDLLHAQRENGNQ-----GKQALTLVFVETKKGADSLENWLCIN 513
Query: 464 GTECFRYHKDRSLEERSKILADFRE-NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVD 523
G H DRS +ER L F+ +LV TD AARG+DIP+VAHV+ D D
Sbjct: 528 GFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 513
Query: 524 FLHRIGRTGRAGQCGLVTSMYTKAN 540
++HRIGRTGRAG GL T+ + N
Sbjct: 588 YVHRIGRTGRAGNSGLATAFFNDNN 513
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q944S1 | 1.1e-168 | 57.66 | DEAD-box ATP-dependent RNA helicase 22 OS=Arabidopsis thaliana OX=3702 GN=RH22 P... | [more] |
Q6H601 | 9.7e-157 | 56.34 | DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q53RK8 | 2.2e-28 | 27.25 | DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q5VRY0 | 2.5e-27 | 25.46 | DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q9Y7T7 | 3.2e-27 | 25.85 | Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Schizosaccharomyces pombe ... | [more] |
Match Name | E-value | Identity | Description | |
XP_023549678.1 | 0.0 | 100.00 | DEAD-box ATP-dependent RNA helicase 22 [Cucurbita pepo subsp. pepo] | [more] |
KAG6601380.1 | 0.0 | 98.45 | DEAD-box ATP-dependent RNA helicase 22, partial [Cucurbita argyrosperma subsp. s... | [more] |
XP_022956592.1 | 0.0 | 98.28 | DEAD-box ATP-dependent RNA helicase 22 [Cucurbita moschata] | [more] |
XP_022997352.1 | 0.0 | 97.42 | DEAD-box ATP-dependent RNA helicase 22 [Cucurbita maxima] | [more] |
XP_038892424.1 | 0.0 | 88.03 | DEAD-box ATP-dependent RNA helicase 22 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GWS3 | 0.0 | 98.28 | DEAD-box ATP-dependent RNA helicase 22 OS=Cucurbita moschata OX=3662 GN=LOC11145... | [more] |
A0A6J1K4R5 | 0.0 | 97.42 | DEAD-box ATP-dependent RNA helicase 22 OS=Cucurbita maxima OX=3661 GN=LOC1114922... | [more] |
A0A5A7SV31 | 0.0 | 85.83 | DEAD-box ATP-dependent RNA helicase 22 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3BFF8 | 0.0 | 85.83 | DEAD-box ATP-dependent RNA helicase 22 OS=Cucumis melo OX=3656 GN=LOC103489039 P... | [more] |
A0A6J1DBC8 | 0.0 | 87.46 | DEAD-box ATP-dependent RNA helicase 22 OS=Momordica charantia OX=3673 GN=LOC1110... | [more] |