Cp4.1LG01g12960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g12960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger protein 5-like
Location	Cp4.1LG01: 8493067 .. 8493723 (-)
RNA-Seq Expression	Cp4.1LG01g12960
Synteny	Cp4.1LG01g12960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGAAAGGCCTCATTGGGGTGTAATTTCGAAGATCGCGAAAGTGGGTTATGTTCAGAAGGGTCTTGCATGGAGAAAAAACTTAAACTTTTTGGTTTTGAGGTGAACCCATCGGAGGAATTGGCCACAAATTGGCGGTTGAAAGGCTCTGTTGGTGAAGCCAATGAGAGCGTGAGTTCATCAACCACGGTCTCAGAGCAGGCCATGGCTATCAACAAGCCCAAATTCGAGTGCCAATATTGCTTCAAAGAGTTCACAAATTCCCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAGGAGAGGTTGAAGAAGAAGAAGATGCAACTTCAAGCCAGAAAAGCCACTCTTAGTTATTATTATCTTCACCCTTTTCAAACACCCTCCAATAATTTCCTCTACCATTTCCCCTCCTCTTACACCCATCACCATGATTCTTCACAGATTAGTTTCAATCAAAACCACGCCCAATTCATCCATTTCGACTCCTTTTTACCTCCTGAAAGACGGCTGTTCACTTTGACACCTGCCGACAGCTCCTCCGCCGCCGCCGCCGCCAAACCTGTCGTTTTTCAGTCATCTTCTTCTTCTTCTTTGCCTCCTGTTGCTTCCCCTTCTTGTAAATCTTTGGATCTTCAACTTGGTCTTAATTAA

mRNA sequence

ATGATGGGAAAGGCCTCATTGGGGTGTAATTTCGAAGATCGCGAAAGTGGGTTATGTTCAGAAGGGTCTTGCATGGAGAAAAAACTTAAACTTTTTGGTTTTGAGGTGAACCCATCGGAGGAATTGGCCACAAATTGGCGGTTGAAAGGCTCTGTTGGTGAAGCCAATGAGAGCGTGAGTTCATCAACCACGGTCTCAGAGCAGGCCATGGCTATCAACAAGCCCAAATTCGAGTGCCAATATTGCTTCAAAGAGTTCACAAATTCCCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAGGAGAGGTTGAAGAAGAAGAAGATGCAACTTCAAGCCAGAAAAGCCACTCTTAGTTATTATTATCTTCACCCTTTTCAAACACCCTCCAATAATTTCCTCTACCATTTCCCCTCCTCTTACACCCATCACCATGATTCTTCACAGATTAGTTTCAATCAAAACCACGCCCAATTCATCCATTTCGACTCCTTTTTACCTCCTGAAAGACGGCTGTTCACTTTGACACCTGCCGACAGCTCCTCCGCCGCCGCCGCCGCCAAACCTGTCGTTTTTCAGTCATCTTCTTCTTCTTCTTTGCCTCCTGTTGCTTCCCCTTCTTGTAAATCTTTGGATCTTCAACTTGGTCTTAATTAA

Coding sequence (CDS)

ATGATGGGAAAGGCCTCATTGGGGTGTAATTTCGAAGATCGCGAAAGTGGGTTATGTTCAGAAGGGTCTTGCATGGAGAAAAAACTTAAACTTTTTGGTTTTGAGGTGAACCCATCGGAGGAATTGGCCACAAATTGGCGGTTGAAAGGCTCTGTTGGTGAAGCCAATGAGAGCGTGAGTTCATCAACCACGGTCTCAGAGCAGGCCATGGCTATCAACAAGCCCAAATTCGAGTGCCAATATTGCTTCAAAGAGTTCACAAATTCCCAAGCTTTGGGAGGCCATCAAAATGCCCACAAGAAGGAGAGGTTGAAGAAGAAGAAGATGCAACTTCAAGCCAGAAAAGCCACTCTTAGTTATTATTATCTTCACCCTTTTCAAACACCCTCCAATAATTTCCTCTACCATTTCCCCTCCTCTTACACCCATCACCATGATTCTTCACAGATTAGTTTCAATCAAAACCACGCCCAATTCATCCATTTCGACTCCTTTTTACCTCCTGAAAGACGGCTGTTCACTTTGACACCTGCCGACAGCTCCTCCGCCGCCGCCGCCGCCAAACCTGTCGTTTTTCAGTCATCTTCTTCTTCTTCTTTGCCTCCTGTTGCTTCCCCTTCTTGTAAATCTTTGGATCTTCAACTTGGTCTTAATTAA

Protein sequence

MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVSSSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTLTPADSSSAAAAAKPVVFQSSSSSSLPPVASPSCKSLDLQLGLN

Homology

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 16  SGLCSEGSCMEKKLKLFGFEV---NPSEELATNWRLKGSVGEANESVSSSTTVSEQAMAI 75
           +G  S GS  +K +KLFGFE+   + + E+ T            ESVSSST  +  ++ +
Sbjct: 10  TGESSSGSSSDKTIKLFGFELISGSRTPEITT-----------AESVSSSTNTT--SLTV 69

Query: 76  NKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYYLHPFQTPSNN 134
            K + ECQYC KEF NSQALGGHQNAHKKERLKKK++QLQAR+A++ YY  +  Q  + +
Sbjct: 70  MK-RHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTS 116

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.7e-10
Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 28  KLKLFGFEVNPSEEL---ATNWRLKGSVGEANESVSSSTTVSEQAMAI-------NKPKF 87
           +LKLFGF V+  E+    +    L     E  E  + S+  S   +          + K+
Sbjct: 14  RLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGGGGGERKY 73

Query: 88  ECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARK 116
           ECQYC +EF NSQALGGHQNAHKKER + K+ QLQA +
Sbjct: 74  ECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATR 111

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.7e-10
Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 26  EKKLKLFGFEVNPSEELATNWRLKGSVGEANESVSSSTTVSEQAMAINKPKFECQYCFKE 85
           E+ ++LFGFE   S E + +   K +  E NES+              + +F+C YCF+ 
Sbjct: 16  ERPIRLFGFEFGASHEESES---KDNYNENNESIKDDN---------KEKRFKCHYCFRN 75

Query: 86  FTNSQALGGHQNAHKKERLKKKKMQLQARKA 117
           F  SQALGGHQNAHK+ER + K+  L +  A
Sbjct: 76  FPTSQALGGHQNAHKRERQQTKRFNLHSNAA 94

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 76  KFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYYLHPFQTP 130
           K+ECQYC +EF NSQALGGHQNAHKKER   K+ Q+ A +    ++  HP   P
Sbjct: 40  KYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNP 93

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.6e-09
Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 27  KKLKLFG-------FEVNPSEELATN-WRLKGSVGEANESVSSSTTVSEQAMAINKPKFE 86
           K +++FG       F +   +E  T+ ++ K    E  E  +   +    +++ N+ +FE
Sbjct: 34  KPIRVFGKDFTGRDFSITTGQEDYTDPYQTKNKEEEEEEDQTGDNSTDNNSISHNR-RFE 93

Query: 87  CQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYYLHPFQTPSNNFLYHFP 140
           C YCF+ F  SQALGGHQNAHK+ER        Q  K  +S Y+ HP   P +    H+P
Sbjct: 94  CHYCFRNFPTSQALGGHQNAHKRER--------QLAKRGVSSYFYHPDNNPYS--YRHYP 143

[Close]

BLAST of Cp4.1LG01g12960 vs. NCBI nr
Match: XP_023549689.1 (zinc finger protein 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425 bits (1092), Expect = 8.96e-150
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS 60
           MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS
Sbjct: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS 60

Query: 61  SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY 120
           SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY
Sbjct: 61  SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY 120

Query: 121 YYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTLTPADS 180
           YYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTLTPADS
Sbjct: 121 YYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTLTPADS 180

Query: 181 SSAAAAAKPVVFQSSSSSSLPPVASPSCKSLDLQLGLN 218
           SSAAAAAKPVVFQSSSSSSLPPVASPSCKSLDLQLGLN
Sbjct: 181 SSAAAAAKPVVFQSSSSSSLPPVASPSCKSLDLQLGLN 218

[Close]

BLAST of Cp4.1LG01g12960 vs. NCBI nr
Match: KAG7032161.1 (Zinc finger protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 393 bits (1010), Expect = 2.46e-137
Identity = 207/218 (94.95%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS 60
           MMGKASL CNFEDRESGLCSEGSCMEKKLKLFGFE+NPSEELATNWRLKGSVGEANESVS
Sbjct: 1   MMGKASLECNFEDRESGLCSEGSCMEKKLKLFGFELNPSEELATNWRLKGSVGEANESVS 60

Query: 61  SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY 120
           SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY
Sbjct: 61  SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY 120

Query: 121 YYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTLTPADS 180
           YYLHPFQT SNNFLYHFPSSYTHH DSSQISFNQN A+FIHF+SFLPPERRLFTLTPADS
Sbjct: 121 YYLHPFQTASNNFLYHFPSSYTHHDDSSQISFNQNDAEFIHFESFLPPERRLFTLTPADS 180

Query: 181 SSAAAAAKPVVFQSSSSSSLPPVASPSCKSLDLQLGLN 218
           SSAAA  KPVVFQSSSS  LPPVASPSCKSLDLQLGLN
Sbjct: 181 SSAAA--KPVVFQSSSS--LPPVASPSCKSLDLQLGLN 214

[Close]

BLAST of Cp4.1LG01g12960 vs. NCBI nr
Match: XP_022956595.1 (zinc finger protein 5-like [Cucurbita moschata] >KAG6601381.1 Zinc finger protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391 bits (1005), Expect = 1.42e-136
Identity = 206/218 (94.50%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS 60
           MMGKASL CNFEDRESGLCSEGSCMEKKLKLFGFE+NPSEELATNWRLKGSVGEANESVS
Sbjct: 1   MMGKASLECNFEDRESGLCSEGSCMEKKLKLFGFELNPSEELATNWRLKGSVGEANESVS 60

Query: 61  SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY 120
           SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY
Sbjct: 61  SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY 120

Query: 121 YYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTLTPADS 180
           YYLHPFQT SNNFLYHFPSS+THH DSSQISFNQN A+FIHF+SFLPPERRLFTLTPADS
Sbjct: 121 YYLHPFQTASNNFLYHFPSSHTHHDDSSQISFNQNDAEFIHFESFLPPERRLFTLTPADS 180

Query: 181 SSAAAAAKPVVFQSSSSSSLPPVASPSCKSLDLQLGLN 218
           SSAAA  KPVVFQSSSS  LPPVASPSCKSLDLQLGLN
Sbjct: 181 SSAAA--KPVVFQSSSS--LPPVASPSCKSLDLQLGLN 214

[Close]

BLAST of Cp4.1LG01g12960 vs. NCBI nr
Match: XP_022997670.1 (zinc finger protein 5-like [Cucurbita maxima])

HSP 1 Score: 380 bits (976), Expect = 4.80e-132
Identity = 206/224 (91.96%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS 60
           MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFE+NPSEELATNWRLKGSVGEANESVS
Sbjct: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFELNPSEELATNWRLKGSVGEANESVS 60

Query: 61  SSTTVS-----EQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARK 120
           SSTTVS     EQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARK
Sbjct: 61  SSTTVSFGERSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARK 120

Query: 121 ATLSYYYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTL 180
           ATLSYYYLHPFQT SNNFLYHFPSSYTH  DSS ISFNQN A+FIHF+SFLPPERRLF+L
Sbjct: 121 ATLSYYYLHPFQTASNNFLYHFPSSYTH-DDSSLISFNQNDAEFIHFESFLPPERRLFSL 180

Query: 181 TPADSSSAAAAAKPVVFQSSSSSS-LPPVASPSCKSLDLQLGLN 218
           TPADSSSAAA  KPVVFQSSSSSS LPPV SPSCKSLDLQLGLN
Sbjct: 181 TPADSSSAAA--KPVVFQSSSSSSSLPPVVSPSCKSLDLQLGLN 221

[Close]

BLAST of Cp4.1LG01g12960 vs. NCBI nr
Match: XP_038893064.1 (zinc finger protein 5-like [Benincasa hispida])

HSP 1 Score: 247 bits (630), Expect = 3.34e-79
Identity = 156/242 (64.46%), Postives = 174/242 (71.90%), Query Frame = 0


Query: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEE-LATNWRLKGSVGEAN-ES 60
           MMGK SL CNFE+RESGL S GSCMEKK+KLFG E+NPS        +   ++GE + ES
Sbjct: 1   MMGKDSLSCNFEERESGLFSRGSCMEKKVKLFGIELNPSNNSYCFKDQSCNNIGEGDHES 60

Query: 61  VSSSTTV-------------SEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLK 120
           V+SSTT               ++A+ + +PKFECQYCFKEFTNSQALGGHQNAHKKERLK
Sbjct: 61  VNSSTTTVCFEQQQQQQQQQQQEAILVKQPKFECQYCFKEFTNSQALGGHQNAHKKERLK 120

Query: 121 KKKMQLQARKATLSYYYLHP--FQTPSNNFLYHFPSS---YTHHHDSSQISFNQNHAQFI 180
           KKKMQLQARKATLSYY L P  FQT +NNFLYH+PSS   +     SSQISFNQN A+FI
Sbjct: 121 KKKMQLQARKATLSYY-LQPSNFQTTTNNFLYHYPSSPPCFFSDDSSSQISFNQNDAEFI 180

Query: 181 HFDS---FLP-PERRLFTLTPADSSSAAAAAKPVVFQSSSSSSLPPVASPSCKSLDLQLG 218
           HFDS   FLP P R  FTLTPAD SS +    PVVF SSSSSS     SPSCKSLDLQLG
Sbjct: 181 HFDSSLSFLPQPRRSFFTLTPADMSSGSP--NPVVFHSSSSSS-----SPSCKSLDLQLG 234

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy TrEMBL
Match: A0A6J1GY76 (zinc finger protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111458285 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 6.88e-137
Identity = 206/218 (94.50%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS 60
           MMGKASL CNFEDRESGLCSEGSCMEKKLKLFGFE+NPSEELATNWRLKGSVGEANESVS
Sbjct: 1   MMGKASLECNFEDRESGLCSEGSCMEKKLKLFGFELNPSEELATNWRLKGSVGEANESVS 60

Query: 61  SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY 120
           SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY
Sbjct: 61  SSTTVSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSY 120

Query: 121 YYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTLTPADS 180
           YYLHPFQT SNNFLYHFPSS+THH DSSQISFNQN A+FIHF+SFLPPERRLFTLTPADS
Sbjct: 121 YYLHPFQTASNNFLYHFPSSHTHHDDSSQISFNQNDAEFIHFESFLPPERRLFTLTPADS 180

Query: 181 SSAAAAAKPVVFQSSSSSSLPPVASPSCKSLDLQLGLN 218
           SSAAA  KPVVFQSSSS  LPPVASPSCKSLDLQLGLN
Sbjct: 181 SSAAA--KPVVFQSSSS--LPPVASPSCKSLDLQLGLN 214

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy TrEMBL
Match: A0A6J1KAH9 (zinc finger protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111492522 PE=4 SV=1)

HSP 1 Score: 380 bits (976), Expect = 2.32e-132
Identity = 206/224 (91.96%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS 60
           MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFE+NPSEELATNWRLKGSVGEANESVS
Sbjct: 1   MMGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFELNPSEELATNWRLKGSVGEANESVS 60

Query: 61  SSTTVS-----EQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARK 120
           SSTTVS     EQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARK
Sbjct: 61  SSTTVSFGERSEQAMAINKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARK 120

Query: 121 ATLSYYYLHPFQTPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTL 180
           ATLSYYYLHPFQT SNNFLYHFPSSYTH  DSS ISFNQN A+FIHF+SFLPPERRLF+L
Sbjct: 121 ATLSYYYLHPFQTASNNFLYHFPSSYTH-DDSSLISFNQNDAEFIHFESFLPPERRLFSL 180

Query: 181 TPADSSSAAAAAKPVVFQSSSSSS-LPPVASPSCKSLDLQLGLN 218
           TPADSSSAAA  KPVVFQSSSSSS LPPV SPSCKSLDLQLGLN
Sbjct: 181 TPADSSSAAA--KPVVFQSSSSSSSLPPVVSPSCKSLDLQLGLN 221

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy TrEMBL
Match: A0A6J1DBL2 (zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111019193 PE=4 SV=1)

HSP 1 Score: 225 bits (574), Expect = 2.05e-71
Identity = 145/226 (64.16%), Postives = 161/226 (71.24%), Query Frame = 0


Query: 2   MGKASLGCNFEDRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVSS 61
           MG  S GCN E+ ESGL S G C EKK+KLFGFE+ PS+       + GS GE +ESV+S
Sbjct: 1   MGNESWGCNLEEGESGLFSSGGCGEKKVKLFGFELKPSKN-----DMSGS-GEGDESVNS 60

Query: 62  STTVSEQAMAI---NKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATL 121
           STTV     AI    +PKFECQYCFKEFTNSQALGGHQNAHKKERLKKK+MQLQARKATL
Sbjct: 61  STTVERSEAAIVVIKRPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKRMQLQARKATL 120

Query: 122 SYYYLHPFQ---TPSNNFLYHFPSSYTHHHDSSQISFNQNHAQFIHFDSFLPPERRLFTL 181
           SYY LHPFQ   + +NNFLY         HDSSQISF+ N A+FIHFD   P ERRLFTL
Sbjct: 121 SYY-LHPFQFQTSNNNNFLYS--------HDSSQISFSPNDAEFIHFD---PQERRLFTL 180

Query: 182 TPADSSSAAAAAKPVVF--QSSSSSSLP-PVASPSCKSLDLQLGLN 218
           T  D+SS      P+VF   SSSSSSLP    +PSCKSLDL LGLN
Sbjct: 181 TQPDTSSGPP--NPLVFYSSSSSSSSLPLSKQNPSCKSLDLHLGLN 206

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy TrEMBL
Match: A0A0A0KVQ6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G603380 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 5.81e-60
Identity = 137/262 (52.29%), Postives = 161/262 (61.45%), Query Frame = 0


Query: 1   MMGKASLGCNFE-DRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESV 60
           MMGK S  CNF+ ++E GL   G CMEKK+KLFG E+NPS     N+  +G     N S 
Sbjct: 1   MMGKDSFCCNFDPEKEGGLFGGGCCMEKKVKLFGIELNPSNNFCNNFHDQGDHESVNSST 60

Query: 61  SSSTTV-----------------SEQAMAI--------NKP--KFECQYCFKEFTNSQAL 120
           +++TTV                  E+A  I        NK   KFECQYC KEFTNSQAL
Sbjct: 61  TTATTVCFDQRSSTNQQEQEEDDQEEAADIVVISNNNNNKKATKFECQYCLKEFTNSQAL 120

Query: 121 GGHQNAHKKERLKKKKMQLQARKATLSYYYLHPFQTPSNNFLYHF-PSSYT--------- 180
           GGHQNAHKKERLKKKKMQLQARKATL+YY L      +N+FLY + P+S +         
Sbjct: 121 GGHQNAHKKERLKKKKMQLQARKATLTYY-LQSNSNNNNHFLYDYDPNSSSPNSSFFISD 180

Query: 181 -HHHDSSQISFNQNHAQFIHFDS---FLPPERR--LFTLTPADSSSAAAAAKPVVFQSSS 218
            ++++SSQISFNQN A  IHFDS   FLP ++R   FT TP D SS   +  PVVF SSS
Sbjct: 181 DYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRQPFFTFTPPDMSSRRPSTNPVVFHSSS 240

[Close]

BLAST of Cp4.1LG01g12960 vs. ExPASy TrEMBL
Match: A0A1S3BEM4 (zinc finger protein 5 OS=Cucumis melo OX=3656 GN=LOC103489043 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 1.22e-56
Identity = 131/262 (50.00%), Postives = 158/262 (60.31%), Query Frame = 0


Query: 2   MGKASLGCNFE-DRESGLCSEGSCMEKKLKLFGFEVNPSEELATNWRLKGSVGEANESVS 61
           MGK S  C+F+ ++ESGL +   CMEKK+KLFG E+NPS      +  +G     N S +
Sbjct: 1   MGKDSFCCDFDQEKESGLFAGSCCMEKKVKLFGIELNPSNNSCNKFHDQGDHESVNSSTT 60

Query: 62  SSTTV---------------SEQAMAIN----------KPKFECQYCFKEFTNSQALGGH 121
           ++TTV                +Q  A N            KFECQYC KEFTNSQALGGH
Sbjct: 61  TTTTVCFDQRSSSNQQEQEEDDQEEAANIVIINNNNRKATKFECQYCLKEFTNSQALGGH 120

Query: 122 QNAHKKERLKKKKMQLQARKATLSYYYLHPFQTPSNNFLYHF--PSSYT----------- 181
           QNAHKKERLKKKKMQLQARKATL+YY      + +N+FLY +  P+S +           
Sbjct: 121 QNAHKKERLKKKKMQLQARKATLTYYLQS--NSTNNHFLYDYDNPNSSSSSPNSSFFISD 180

Query: 182 -HHHDSSQISFNQNHAQFIHFDS---FLPPERR--LFTLTPADSSSAAAAAKPVVFQSSS 218
            ++++SSQISFNQN A  IHFDS   FLP ++R   FT TP D SS   +  PVVF SSS
Sbjct: 181 DYYYNSSQISFNQNDAGLIHFDSSLPFLPQQQRRPFFTFTPPDMSSRQPSTNPVVFHSSS 240

[Close]

BLAST of Cp4.1LG01g12960 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-20
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 16  SGLCSEGSCMEKKLKLFGFEV---NPSEELATNWRLKGSVGEANESVSSSTTVSEQAMAI 75
           +G  S GS  +K +KLFGFE+   + + E+ T            ESVSSST  +  ++ +
Sbjct: 10  TGESSSGSSSDKTIKLFGFELISGSRTPEITT-----------AESVSSSTNTT--SLTV 69

Query: 76  NKPKFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYYLHPFQTPSNN 134
            K + ECQYC KEF NSQALGGHQNAHKKERLKKK++QLQAR+A++ YY  +  Q  + +
Sbjct: 70  MK-RHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTS 116

[Close]

BLAST of Cp4.1LG01g12960 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-11
Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 28  KLKLFGFEVNPSEEL---ATNWRLKGSVGEANESVSSSTTVSEQAMAI-------NKPKF 87
           +LKLFGF V+  E+    +    L     E  E  + S+  S   +          + K+
Sbjct: 14  RLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGGGGGERKY 73

Query: 88  ECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARK 116
           ECQYC +EF NSQALGGHQNAHKKER + K+ QLQA +
Sbjct: 74  ECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATR 111

[Close]

BLAST of Cp4.1LG01g12960 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-11
Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 26  EKKLKLFGFEVNPSEELATNWRLKGSVGEANESVSSSTTVSEQAMAINKPKFECQYCFKE 85
           E+ ++LFGFE   S E + +   K +  E NES+              + +F+C YCF+ 
Sbjct: 16  ERPIRLFGFEFGASHEESES---KDNYNENNESIKDDN---------KEKRFKCHYCFRN 75

Query: 86  FTNSQALGGHQNAHKKERLKKKKMQLQARKA 117
           F  SQALGGHQNAHK+ER + K+  L +  A
Sbjct: 76  FPTSQALGGHQNAHKRERQQTKRFNLHSNAA 94

[Close]

BLAST of Cp4.1LG01g12960 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 76  KFECQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYYLHPFQTP 130
           K+ECQYC +EF NSQALGGHQNAHKKER   K+ Q+ A +    ++  HP   P
Sbjct: 40  KYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNP 93

[Close]

BLAST of Cp4.1LG01g12960 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-10
Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 27  KKLKLFG-------FEVNPSEELATN-WRLKGSVGEANESVSSSTTVSEQAMAINKPKFE 86
           K +++FG       F +   +E  T+ ++ K    E  E  +   +    +++ N+ +FE
Sbjct: 34  KPIRVFGKDFTGRDFSITTGQEDYTDPYQTKNKEEEEEEDQTGDNSTDNNSISHNR-RFE 93

Query: 87  CQYCFKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLSYYYLHPFQTPSNNFLYHFP 140
           C YCF+ F  SQALGGHQNAHK+ER        Q  K  +S Y+ HP   P +    H+P
Sbjct: 94  CHYCFRNFPTSQALGGHQNAHKRER--------QLAKRGVSSYFYHPDNNPYS--YRHYP 143

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39264	1.0e-18	48.76	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9C9H1	6.7e-10	42.86	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q9FG05	8.7e-10	39.56	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
Q39265	1.5e-09	55.56	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q84WI0	9.6e-09	33.88	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]

BLAST of Cp4.1LG01g12960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549689.1	8.96e-150	100.00	zinc finger protein 10-like [Cucurbita pepo subsp. pepo]	[more]
KAG7032161.1	2.46e-137	94.95	Zinc finger protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022956595.1	1.42e-136	94.50	zinc finger protein 5-like [Cucurbita moschata] >KAG6601381.1 Zinc finger protei...	[more]
XP_022997670.1	4.80e-132	91.96	zinc finger protein 5-like [Cucurbita maxima]	[more]
XP_038893064.1	3.34e-79	64.46	zinc finger protein 5-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g12960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY76	6.88e-137	94.50	zinc finger protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111458285 PE=4 SV...	[more]
A0A6J1KAH9	2.32e-132	91.96	zinc finger protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111492522 PE=4 SV=1	[more]
A0A6J1DBL2	2.05e-71	64.16	zinc finger protein 5-like OS=Momordica charantia OX=3673 GN=LOC111019193 PE=4 S...	[more]
A0A0A0KVQ6	5.81e-60	52.29	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G603380 P...	[more]
A0A1S3BEM4	1.22e-56	50.00	zinc finger protein 5 OS=Cucumis melo OX=3656 GN=LOC103489043 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g12960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10480.1	7.3e-20	48.76	zinc finger protein 5	[more]
AT1G68360.1	4.7e-11	42.86	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06650.1	6.2e-11	39.56	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	1.1e-10	55.56	zinc finger protein 6	[more]
AT3G58070.1	6.8e-10	33.88	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 54..123 e-value: 3.3E-8 score: 35.2
None	No IPR available	PANTHER	PTHR46353:SF5	ZINC FINGER PROTEIN 5	coord: 18..218
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 18..218
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 79..99
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 77..104 score: 11.385298
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 74..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g12960.1	Cp4.1LG01g12960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0010090	trichome morphogenesis