Cp4.1LG01g12760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g12760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thioredoxin H4-like
Location	Cp4.1LG01: 8598103 .. 8599116 (-)
RNA-Seq Expression	Cp4.1LG01g12760
Synteny	Cp4.1LG01g12760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATATAAAATTTTAAAAGCATTCACATAGATTGGAGGCGACGGAATCATATTTTTTCTTCTCATTATATAAAGCTGATCATCAGCCATGTCTTCAAACAAGATTTCTATCTTAGAAGAGGCTCAAACAAAGATCTGAGTTCAAAACTTGAAGCTTCAGTTTCAAAAAAAATGGGAGCAAGCTTTACAATCCCACGTTCAAGATCTTCCAATGCAACATTACAAGCCATGGCTCCCACCATTGTGGAGTGCCACAACAAAGCAGAGTGGACAGCTCGTTTGGAAGCCACAAGGGAAACAAACAAGCTTGTAAGTTTAATACCAACTCTTTATCCCAACATATAGGGATGCAAACGCTTTGGGTTTGTGATTTCTTCTTGTGCTGCTGGTTTGGTATAGATGGTGATTGACTTCACTGCTGCATGGTGTGAACCTTGTCGACGAATGGAGCCGATCATCAAGGAGTTTGCTTCGAGGTTCAAGGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGATGGTATGAGCTTTCAATCTTGTTTTGATTCAATCTTGTTTTGACTGTGTTGAAAAAATGGATGACAACAGGATGTTGCAAAGGAATATGGAGTGGACGCAATGCCAACATTCATACTGATTAAGAAGGGGAAGGTAGTTGATAAGGTGGTCGGCGCCAGGAAGGATGACCTGCAGAAGAAGATTGAGAATCATAGTAAATATTGATGGATGCTCCTCTTGAAGCTTCTCAATAAGCCAGGAAGAACTAGTACTATAGAACAAACTAAAATGGTGTTTATTTTATTATTCCAGCCCTTCTCACTTCTGATATAAAAAGAAAAAAAAGTATACTTCCTTCTGCTATTTGTCCAATCTCTCTGTCTTTCTCTTCCTCTGCCCAAATTACGCACAAGTATTGTAATGTTTCAAGTCTACTACTAGGAGATATTGTCCTCTTTGGACAAACGTGTCAGCTAGGGAGACGTAAGCTCACCTCTAGTAGATATTGTCCTC

mRNA sequence

ATTTATATAAAATTTTAAAAGCATTCACATAGATTGGAGGCGACGGAATCATATTTTTTCTTCTCATTATATAAAGCTGATCATCAGCCATGTCTTCAAACAAGATTTCTATCTTAGAAGAGGCTCAAACAAAGATCTGAGTTCAAAACTTGAAGCTTCAGTTTCAAAAAAAATGGGAGCAAGCTTTACAATCCCACGTTCAAGATCTTCCAATGCAACATTACAAGCCATGGCTCCCACCATTGTGGAGTGCCACAACAAAGCAGAGTGGACAGCTCGTTTGGAAGCCACAAGGGAAACAAACAAGCTTATGGTGATTGACTTCACTGCTGCATGGTGTGAACCTTGTCGACGAATGGAGCCGATCATCAAGGAGTTTGCTTCGAGGTTCAAGGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGATGGATGTTGCAAAGGAATATGGAGTGGACGCAATGCCAACATTCATACTGATTAAGAAGGGGAAGGTAGTTGATAAGGTGGTCGGCGCCAGGAAGGATGACCTGCAGAAGAAGATTGAGAATCATAGTAAATATTGATGGATGCTCCTCTTGAAGCTTCTCAATAAGCCAGGAAGAACTAGTACTATAGAACAAACTAAAATGGTGTTTATTTTATTATTCCAGCCCTTCTCACTTCTGATATAAAAAGAAAAAAAAGTATACTTCCTTCTGCTATTTGTCCAATCTCTCTGTCTTTCTCTTCCTCTGCCCAAATTACGCACAAGTATTGTAATGTTTCAAGTCTACTACTAGGAGATATTGTCCTCTTTGGACAAACGTGTCAGCTAGGGAGACGTAAGCTCACCTCTAGTAGATATTGTCCTC

Coding sequence (CDS)

ATGGGAGCAAGCTTTACAATCCCACGTTCAAGATCTTCCAATGCAACATTACAAGCCATGGCTCCCACCATTGTGGAGTGCCACAACAAAGCAGAGTGGACAGCTCGTTTGGAAGCCACAAGGGAAACAAACAAGCTTATGGTGATTGACTTCACTGCTGCATGGTGTGAACCTTGTCGACGAATGGAGCCGATCATCAAGGAGTTTGCTTCGAGGTTCAAGGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTGATGGATGTTGCAAAGGAATATGGAGTGGACGCAATGCCAACATTCATACTGATTAAGAAGGGGAAGGTAGTTGATAAGGTGGTCGGCGCCAGGAAGGATGACCTGCAGAAGAAGATTGAGAATCATAGTAAATATTGA

Protein sequence

MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHSKY

Homology

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-29
Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRF-KDVEFVKID 83
           ++ CH    WT +L+  +E+NKL+VIDFTA+WC PCR + PI  + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHS 130
           VDEL  VAKE+GV+AMPTF+ IK G+VVDK+VGA K+DLQ KI  H+
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-28
Identity = 52/102 (50.98%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           +++  + A W       +E+NKL+V+DF+A+WC PCR +EP I   A +F DV+FVK+DV
Sbjct: 27  VLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDV 86

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKI 126
           DEL DVAKE+ V AMPTF+L+K+GK +++++GA+KD+L+KK+
Sbjct: 87  DELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKV 128

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.3e-28
Identity = 55/105 (52.38%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           ++ CHNK E+ A++   +E  K+++IDFTA+WC PCR + P+  E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENH 129
           DEL +VA++Y V+AMPTF+ IK G   DKVVGARKDDLQ  I  H
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.3e-28
Identity = 55/105 (52.38%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           ++ CHNK E+ A++   +E  K+++IDFTA+WC PCR + P+  E+A +F    F+K+DV
Sbjct: 8   VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDV 67

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENH 129
           DEL +VA++Y V+AMPTF+ IK G   DKVVGARKDDLQ  I  H
Sbjct: 68  DELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy Swiss-Prot
Match: Q39362 (Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.5e-28
Identity = 56/107 (52.34%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRF-KDVEFVKID 83
           ++ CH    W  +L+  +++NKL+VIDFTA+WC PCR + P+  + A +F     F K+D
Sbjct: 8   VIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVD 67

Query: 84  VDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHS 130
           VDEL +VA+E+GV+AMPTF+LIK G VVDKVVGARK+DL   I  H+
Sbjct: 68  VDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKHT 114

[Close]

BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: XP_023537977.1 (thioredoxin H4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262 bits (670), Expect = 2.75e-88
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR
Sbjct: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
           RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD
Sbjct: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120

Query: 121 LQKKIENHSKY 131
           LQKKIENHSKY
Sbjct: 121 LQKKIENHSKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: KAG6601401.1 (Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032181.1 Thioredoxin H2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253 bits (647), Expect = 8.86e-85
Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFTIPRS+SSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
           +MEP IKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD
Sbjct: 61  QMEPTIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120

Query: 121 LQKKIENHSKY 131
           LQKKIENH KY
Sbjct: 121 LQKKIENHGKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: XP_022936042.1 (thioredoxin H4-like [Cucurbita moschata] >XP_022957099.1 thioredoxin H4-like [Cucurbita moschata])

HSP 1 Score: 252 bits (643), Expect = 3.61e-84
Identity = 125/131 (95.42%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFTIPRS+SSNATLQAM PTIVECHNKAEWTARLEATRETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMTPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
           +MEP IKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD
Sbjct: 61  QMEPTIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120

Query: 121 LQKKIENHSKY 131
           LQKKIENH KY
Sbjct: 121 LQKKIENHGKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: XP_023000334.1 (thioredoxin H4-like [Cucurbita maxima])

HSP 1 Score: 243 bits (621), Expect = 8.19e-81
Identity = 119/131 (90.84%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFTIPRS+SSNATLQAMAPTIV+CHNKAEWTARLEATRETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMAPTIVKCHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
           +MEP I++FA RFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKV+G R++D
Sbjct: 61  QMEPTIEKFALRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVIGVRRED 120

Query: 121 LQKKIENHSKY 131
           LQKKIENHSKY
Sbjct: 121 LQKKIENHSKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. NCBI nr
Match: XP_004135204.1 (thioredoxin H-type [Cucumis sativus] >KGN51870.1 hypothetical protein Csa_007853 [Cucumis sativus])

HSP 1 Score: 228 bits (581), Expect = 1.03e-74
Identity = 109/131 (83.21%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFT+PRS+SSNA +Q   PTI+ECH+KA+WTAR EAT+ETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP IKE A+RFKDVEFVKIDVDELMDVAKEYGV+AMPTFILIK GKV+DKVVGAR+DD
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIENHSKY 131
           LQKKIE HSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy TrEMBL
Match: A0A6J1F7B2 (thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111442762 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 1.75e-84
Identity = 125/131 (95.42%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFTIPRS+SSNATLQAM PTIVECHNKAEWTARLEATRETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMTPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
           +MEP IKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD
Sbjct: 61  QMEPTIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120

Query: 121 LQKKIENHSKY 131
           LQKKIENH KY
Sbjct: 121 LQKKIENHGKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy TrEMBL
Match: A0A6J1KJL7 (thioredoxin H4-like OS=Cucurbita maxima OX=3661 GN=LOC111494571 PE=4 SV=1)

HSP 1 Score: 243 bits (621), Expect = 3.96e-81
Identity = 119/131 (90.84%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFTIPRS+SSNATLQAMAPTIV+CHNKAEWTARLEATRETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMAPTIVKCHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
           +MEP I++FA RFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKV+G R++D
Sbjct: 61  QMEPTIEKFALRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVIGVRRED 120

Query: 121 LQKKIENHSKY 131
           LQKKIENHSKY
Sbjct: 121 LQKKIENHSKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy TrEMBL
Match: A0A0A0KQG0 (Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1)

HSP 1 Score: 228 bits (581), Expect = 4.99e-75
Identity = 109/131 (83.21%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFT+PRS+SSNA +Q   PTI+ECH+KA+WTAR EAT+ETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP IKE A+RFKDVEFVKIDVDELMDVAKEYGV+AMPTFILIK GKV+DKVVGAR+DD
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIENHSKY 131
           LQKKIE HSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy TrEMBL
Match: A0A6J1DAH1 (thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 2.36e-73
Identity = 108/131 (82.44%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFT+PRS+SSNATLQA APTIVECH K +WTAR EA++ETNKL+VIDFTA WC PCR
Sbjct: 22  MGASFTVPRSKSSNATLQAKAPTIVECHTKPQWTARFEASKETNKLLVIDFTATWCGPCR 81

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP IKEFA+RF DVEFVKIDVDEL DVA+EYGV+AMPTFILIK GKV+DKVVGARK+D
Sbjct: 82  HMEPTIKEFAARFVDVEFVKIDVDELTDVAREYGVEAMPTFILIKNGKVIDKVVGARKED 141

Query: 121 LQKKIENHSKY 131
           LQKKIE HSKY
Sbjct: 142 LQKKIEKHSKY 152

[Close]

BLAST of Cp4.1LG01g12760 vs. ExPASy TrEMBL
Match: A0A6J1G103 (thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111449688 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 1.37e-72
Identity = 107/131 (81.68%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MGASFTIPRSRSSNATLQAMAPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCR 60
           MGASFT PRSRSS+ +L+  APTIVECHNKAEWTA  EAT+ETNKLMVIDFTAAWC PCR
Sbjct: 1   MGASFTAPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60

Query: 61  RMEPIIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120
            MEP IKEFA+RFKDVEF+KIDVD+L DVAKEYGV+AMPTFIL+K GKVVDKVVGAR++D
Sbjct: 61  HMEPTIKEFAARFKDVEFIKIDVDKLTDVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120

Query: 121 LQKKIENHSKY 131
           LQKKIE +SKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of Cp4.1LG01g12760 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-30
Identity = 59/107 (55.14%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRF-KDVEFVKID 83
           ++ CH    WT +L+  +E+NKL+VIDFTA+WC PCR + PI  + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHS 130
           VDEL  VAKE+GV+AMPTF+ IK G+VVDK+VGA K+DLQ KI  H+
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of Cp4.1LG01g12760 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-29
Identity = 52/102 (50.98%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           +++  + A W       +E+NKL+V+DF+A+WC PCR +EP I   A +F DV+FVK+DV
Sbjct: 27  VLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDV 86

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKI 126
           DEL DVAKE+ V AMPTF+L+K+GK +++++GA+KD+L+KK+
Sbjct: 87  DELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKV 128

[Close]

BLAST of Cp4.1LG01g12760 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 119.0 bits (297), Expect = 2.8e-27
Identity = 50/105 (47.62%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           ++ CH    W  +++   E+ KL+VIDFTA+WC PCR + P+  E A +F +V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENH 129
           DEL  VA+E+ V+AMPTF+ +K+G ++D+VVGA KD++ +K+  H
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Cp4.1LG01g12760 vs. TAIR 10
Match: AT1G69880.1 (thioredoxin H-type 8 )

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-27
Identity = 51/110 (46.36%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 21  APTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVK 80
           +P IVE  N  +W +RL A ++TNKL+VI+FTA WC PC+ +EP ++E A+++ DVEFVK
Sbjct: 36  SPCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVK 95

Query: 81  IDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENHSK 131
           IDVD LM V  E+ +  +P  + +K+G+ VD VVG + D+L++K+  +++
Sbjct: 96  IDVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKLNKYTQ 145

[Close]

BLAST of Cp4.1LG01g12760 vs. TAIR 10
Match: AT1G59730.1 (thioredoxin H-type 7 )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 48/105 (45.71%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 24  IVECHNKAEWTARLEATRETNKLMVIDFTAAWCEPCRRMEPIIKEFASRFKDVEFVKIDV 83
           +VE  ++ +W +  ++ + +NKL+VIDFTA WC PC+ MEP ++E AS++ +  F ++DV
Sbjct: 23  VVEIESRRQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAVFARVDV 82

Query: 84  DELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDDLQKKIENH 129
           D LMDVA  Y    +P F+ +K+G+ +D+VVGA+ D+L KKIE H
Sbjct: 83  DRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPDELVKKIEQH 127

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39239	2.3e-29	55.14	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
Q38879	1.9e-28	50.98	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q0D840	4.3e-28	52.38	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
A2YIW7	4.3e-28	52.38	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]
Q39362	9.5e-28	52.34	Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g12760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537977.1	2.75e-88	100.00	thioredoxin H4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6601401.1	8.86e-85	96.18	Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032181.1 Th...	[more]
XP_022936042.1	3.61e-84	95.42	thioredoxin H4-like [Cucurbita moschata] >XP_022957099.1 thioredoxin H4-like [Cu...	[more]
XP_023000334.1	8.19e-81	90.84	thioredoxin H4-like [Cucurbita maxima]	[more]
XP_004135204.1	1.03e-74	83.21	thioredoxin H-type [Cucumis sativus] >KGN51870.1 hypothetical protein Csa_007853...	[more]

BLAST of Cp4.1LG01g12760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7B2	1.75e-84	95.42	thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111442762 PE=4 SV=1	[more]
A0A6J1KJL7	3.96e-81	90.84	thioredoxin H4-like OS=Cucurbita maxima OX=3661 GN=LOC111494571 PE=4 SV=1	[more]
A0A0A0KQG0	4.99e-75	83.21	Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1	[more]
A0A6J1DAH1	2.36e-73	82.44	thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1	[more]
A0A6J1G103	1.37e-72	81.68	thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111449688 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g12760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19730.1	1.6e-30	55.14	Thioredoxin superfamily protein	[more]
AT5G39950.1	1.4e-29	50.98	thioredoxin 2	[more]
AT1G45145.1	2.8e-27	47.62	thioredoxin H-type 5	[more]
AT1G69880.1	3.7e-27	46.36	thioredoxin H-type 8	[more]
AT1G59730.1	1.8e-26	45.71	thioredoxin H-type 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 94..105 score: 38.29 coord: 47..55 score: 43.64 coord: 55..64 score: 50.22
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 8..130 e-value: 7.5E-40 score: 137.7
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 17..129
None	No IPR available	PANTHER	PTHR10438:SF416	THIOREDOXIN H7	coord: 17..129
None	No IPR available	CDD	cd02947	TRX_family	coord: 37..104 e-value: 2.50403E-27 score: 94.9324
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 26..126 e-value: 3.1E-28 score: 97.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 6..130 score: 14.699168
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 48..66
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 19..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g12760.1	Cp4.1LG01g12760.1	mRNA