Cp4.1LG01g12740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g12740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein TWIN LOV 1
Location	Cp4.1LG01: 8635003 .. 8641155 (-)
RNA-Seq Expression	Cp4.1LG01g12740
Synteny	Cp4.1LG01g12740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACACCACAGTATGACGAGGATTTGGATAAGAACGGTATTCGGCTCAGCGTCGGTGCCCTGGTTTGCTTCTGTTCTCAGCCCATCGATACCTTGTTCCTCATCTACGTGGACACTCCTTGTCACAATGATTGGGACTACCATCGGCACACCCTCTCTAATTCCTCCGTTTTTCGGTAAATCTGTGGCAACTCAGCAAGAAAATTATACCTTGATCTTCATGATTTACATTCTTGTTATCTTTTTGATATGATCAGAAGCTTACAACAATGGGATAACCATTTTTCCTTGTTTTTTTTTTTGTAAATATTTTGTGGCCGAAGGAGGGGGTAATATCAACCAGAAATATTGTGCCGCGAATTTGTGAACGGCGTTGGTTCTGCTTTCGTTTTCTTCATTGCTGGTTTGATATTTTTCATTTTCCAATCTCGACGGCGTGATGTGTGATTTGATTTCTGGATCATTTTCATTTCAATTTTCTCATCGCATCGAAATATGGATAGTTGCGAACAATTTTTGTTGATCACAATTTACGCGATATTTTTCATTCGGATGTTCTCTTATTCACAGTCATATGGACACTCGTAGTTGCTAAGTGTGTTCTCCCAGCGAGTAGCTTGTCGAATCCCTGAGTCGATACGTATTCATTCTAGGGTTTTTGTTTGTTGTTCTTCTTGATTTTATATACTGAAGTTCAAAGCTTCTTCGAGAGACTGAACCCGAGGTTTGAGTGCCTCATGGGATTGGGACTATTCCGAATATCGAGGAAGAAAGGGGTTTTAGTCCAACAAGTTGAAGAACCAGGAGGATGGAATTTCAATTGGGTTTGATTGAACAATCACTTAACAGTCGTTATTCTCTCTGGGTCCGTGAAGCTCTTAATGATTTATCGGATAATTTTACAATCACTGATCCCAGTATATCGGGTCACCCAATTGTGTTCGTGAGCCGTGGATTCTTGAAGATGACTGGATATACCAAAGAAGAGGTGATTGGAAAAAATGGGAGGATGTTTCAGGGCCCAAAAACTTGTAGGAGTTCAGTAATGCAAATTCGCGAGGCAATTAGGGAAGAGAAGGGGATTCAAATTAATTTGCTAAATTATCGTAAAGATGGTACACCCTTCTGGGTCTTTTTTCAACTGAGTCCTGTCTTCTGCAAGGAAGATGGGCGGATCATTCACTTTGTGGGTGTTCAGGTGCCGATATGGAAGAATTCAAGGAAATCTATATGTGGGTTCTCTAGAATTCAAGGTGTTCCTTATGAGAATGAATTTAGAGCGAGCAAAAGTCTTTTAGAGTCCTGCCGCCGGGAGTTGTTGTCTGATTCTATCTCGGAATTGGATTTTCTTTTGAACAGAGATTCACCACCGGATTCCGACATCAGAGGTCTGTCTCTAAATTATGCATCAAGCCGTTTCCTGTTTGCTCCTGTTGAAATTTTTGAGCTGATTGCATTCATTTTTCTTCTTGATTTTCTTCCCATTCTGGTAACCAGTTTCTATCTAGAGCTTGATCCAGTGTTTCCTGAAAGTATTGCTTGAACTTCCATCTATTTCTCTCCTTCACTTTCTTCTTACCTTTCTCGTTCTGTTAACATTGAGTAATGTTTTAATATTTTTCAACACAGATTTATGATCTGCTACCATTATTCATTCAGAGTTTTAGTCATTCCGCTAGTTTTTGTTTTATTTTTGTTTTCATCTTTGGTTATGATATTGGCCATTGATTTTCTCCTGAGTGGATATCTCATAGGAGTAGACATTGAAGAACCATGTGAAGCTTGTGATGATGAGAAGCAAAGAGCTGCAATTGCTATTAGTAACATCTTATCTGTCCTAACTCATCACAGTGAGGTAACTGGAAGATTGGTGTGCGAAAGGAGATGCAGCGTGCCAAGGGTGGGCATTCTTTGTTCATCCTTGAATACATCTCTTAATAGAATTAAACAGAGCTTTGTATTGTGAGTTATTCCAGACTAGTACTTCTGTTTATGCCTAAATCTTATGCTTTATGAGCGAATAAGTTATCCTGTTCACTTTTGGATTCATGTCATGTCTCTGCATTTTTCAGAACCGATCCGAACTTACCAGACATGCCTATAGTTTATGCGAGCGACGAGTTTTTGAAATTAACAGGTGCTAAACTAAACATTGAGGCAACTATATAGCATTTAAGATTTTGATGCCTAAAGATTCTGATTGAACAATACATTACAATTTTTCTTGCCTTGCATGCCTTAGGTTATACTAGACGTGAAGTGCTGGGGCGCAACTGTAGATTCTTAAGTGGAATTGACACGGATTCTTCAACCCTTTTTAAGGTTGTGTATTTCCTCCTTTCTTGTTCATCAAGCATTTTTCACCTGAGTTTCTGATGAGTTAATTGGAGGATTGAAGGAGCCTATAGAAATAATTGTTATGAATCTGATTTTCTTTTCCAGATAAAGGAAAGTCTTCAATCTGAACAAGCTTGCACTGTGCGGATTTTAAATTACAGGTTGATATTATCTACAACATTTTATACAATGCGTAATTTGTAGTCTTCAGAATAAAAGACAACTTTCTAACTGCTCTTACAACAGGAAAAATAAGAGCTCATTTTGGAATGATCTCCACATATCACCTGTTCGAAATGCTTCAGGAAAGGTATTGTTGCTTTCTTTAGTATTGATTGAAATTTTGGGATTCTCTAGTTCTAATAATGTCCACGTTTTCTGAATTGAGTTAAAAAAAATTGTTTGCCTTCTTTAGTCATAGTACATTGTGCACGATCACCCATCTAAGACAAGCACTGTATTTAGTTCAAATTCAAAGATGGTTTCGGAGCTGTTGTTGAATGTAACTTTCTATTTTTATTTTCAGAAATGTTTTTAAGTGCTGAATTTGGATGATTCATATAGATTAACGTTATTATAATGTTAAAGATTGCTATGTTATGTTTGAATGCTCGACTTACAAACCGCAACTAAGGAAGGAACAAAACTTAAAAAATAAAAAATAAAAAATAAAAGAAAAAGACAAAAAGACTCAGGGAAGGAACGATAACTTTAGTTGTTTTGGAAAATAGATATGTGAGATCTCACATCGATTGGAGAGGGGAACGAGTGCCAGCGAAGACGTTGGGCCCTAAAGGGGGTAGATTGTGAGATCCCACATTGGTTGGAGAGGGGAGCAAAACACCCTTTATAAAGGTTTGGATTGGAAACCTCTCCCTAGCATATGCCTTTTAAAAACCTTGAGGGGAAGTCCGAAAGGAAAAACTCAAAGAGGACAATATCTTCTAGCGGTGGGCTTGAGCTTAGGCATGGGCTGTTACAAGATAATCCGGGCAGAACAATTCAAAGAATAGTTATGAAACCTTGCTTTCATTAATGTTTCTTTGCCCCAGTATTTGATCAATGTGTATAACAAGAAGTGTACTAACGCCCACTATTGTACTAATGCCCACTATTGTTTACCTTTTGACATTTTATAGCTGAATTTACCAAGAAAGCTTTTCTATTTCCTTACCAAGTGAATGGTATTGTTTGCAGGTAGCGTACTTTGTGGGTGTGCAGATGGATGAAGATGATAAAAAGCAGGATGAACATGGGTTGAACCCTAAGATGAAACAACTTAGCACCGTGGGTGCAGTCAGGGTGGCCGTGAGGAGCTTGTCCATGACTGTGGGATGTTCACGGGGCTAGCCTGTTCGTCTCGTTTTGAAAAGTAATATTAAATTTTCACTGTAATTACATCTCCTGAAGAGGTATATAAGAAAGATAAGACAGTAGATGTTCTTAAACGCTATTGTAAAGGTCTCATTTTTCTAATATGGAATGTGAAGCGTCTCAATTTTAAGTTGAAACGGTGGGCATTCTTTTGATTTATGTGTTAGCGGCTGTGTTTACCTTGTGGCTTATTAGTATGAGGGAATGTATTGAACTCACTGGACAAGCAAATACTTATGCCTACTTTGTTGTCCAAATGGTTTACCAGTCCTTTGCTAAAACCTGCTAGGTGAAGTTTAGATTGTTTCGTGGACTGATTAAAATTAAATATTATCATACCATAGTTTCTGATTGTTATATATCTGATTGTTATATATCCGTCAAATTTAGTATGCAAAGAACGTGCAATAAGAAAGATTCAATTAATGCAAACCAAATACAAAGAGGTTGATAAAAAGATGCTTTGGCGAATAGTTAACTCTCTCCCACGCATATCAGATTCACTGATACAAGTCATTTCATTCTCCGCCCACCTGAAAAATTTACCCTTCCATTCTGTTTGTCTCATGCCAGCTGAAAGATAAGAGCATTTGCAGCGCTTGTCAAGATTCTCTCCACTGGATGGAAGGCGGGAATGTCAATCTATTTGAATAAATCTGTGAAACCCTGTAAGTATTACTGCATCATATCTATATCTATATCTATCTATTGTCGTGCTTTTGGTCTGTACTTGTACTGCATAGCCCAAAATAGGTAGTGCACAAAGTTTAATCCACTGAGCACACACATCAACCAGTAGAATCTCTCAAGGTGATAATGGTTTAGATTTCTTCCCGACAGCCATGGCTGGTGGTCTGATCTATCTGTGACGTTGTTGATTATTGATATAACCACTGAGCTAAGATAGTACCCCATAGCCAGAGAAGCCCAGGATAGAGATGTAGCTAAGGATCTCATACTTGCAGGTGCTTCTGTGAAGAAAAATTCCAATGATCCAGCCAAGGAGAAAAGATCTGCTGATCCCAGAAACAAGTACTGGATGGCAATCCAAAGGAACGAGATGGGCAATGGCTGAGCCGAGTCGAGTAGACCGTGTTTGGTGGCTACTCTCTTGCGCTTAGTCTCAACAGCTGCTGCAACAGCCATGGCTCCAATAGAGAAAAGTAACCCAACTCCAATCCTCTGAAGATGAGTGATCCCCGTTTCAGTTTTTGTTATTCTCCGAGAAAACGGGATGATTAAGTGATCATATATCGGTGCAAGGAACATGATGAAGAGTATTGGGAATATAGGGAGAGATGCAGGTGGAACTTTAAAAGAACCTATTTTGGTGTCCATTGTTGATGCTTGTTCCACCGAAAATGTAGATAGCTGAGCTACACAGCAGTTGAGGATGATGGTGCAAGCAAATATTGGTAGAATTCTCAACACAATCTTCACTTCTTCAACTTCTTTCACTGTACATTCTAATGCTGAATAGAATGGCTTATTCAGAGCTGCATTATTTAGAAACTTGAGGCTCTCTGATGGCTCTTCCACCTCATCTGTTGAATGTCTTTCCTTTTCATTTTGTATAGCTTCCTTGTCATCAAGAGCCGGGCTCATCTCCATACTCGATATCGAGTTTCGTGAGTTCATGCCGATGCAGCAACCAAACATTGCAGCTACTAAAACCTGCTCTCAGTAAAAACACAAAAGCTCATTCATTTGATTCCATTTTGCCTCATATTAAAAGTTTCAACTTTATTTCTACCTTGCTAATTGTTGTGAATGGGCTTCCATTAGGTATTTTGTTGCGGTAAAGAGGGGAGCCTGCAAAGAACACAACCATGGACAGAACTATGCTGAGCATTGCAATTCCAAAGCCCCACTCCCAGCCTTTGTTGTCTTCAACCCACACCACCAAGGTGACTGCAATTAGCCCACCACATGACAGACAAAACACAAAGTAGTTGAAGAAACTGGATCTCCTTTTCCTGCCATGTGGGGTACTGTCGTCAAACTGCTCCGCCCCATGCGACGGCAGCGACCCTTTTATGCCACCGACTCCCAACGCCACCAGATATAGCCCAGAAAACAACATTGCTTCTTTACCACCGCTCGCTTCTTCGCACATGGTGCCATGGTTTGCGTGGCGATCGCATGGAGGAGGCATCAGCGATGGTATCTTGGCTTGTATCAGCAACACTGCCAATCCCTGCATAAATTCTTGGATTAGAGCTTCATTACTGTAATCATTACCTAAATCAAAGTTGATTACAACGTTAACTATGTTTTTATGTCAGAAGATATTGATTGTCAGATTGAAATGATAGGATCATAAGTAGTTGGAATGAGAGGAAATGCAAGGAGGCAGGTGTCAGTACTAAGCAATCATATTCCCTCACTGACACCAATGTGAACACACTTGAAGCCACGTGTTACTCTTTCCTCTCATCCTATT

mRNA sequence

ACACACCACAGTATGACGAGGATTTGGATAAGAACGGTATTCGGCTCAGCGTCGGTGCCCTGGTTTGCTTCTGTTCTCAGCCCATCGATACCTTGTTCCTCATCTACGTGGACACTCCTTGTCACAATGATTGGGACTACCATCGGCACACCCTCTCTAATTCCTCCGTTTTTCGGAGGGGGTAATATCAACCAGAAATATTGTGCCGCGAATTTGTGAACGGCGTTGGTTCTGCTTTCGTTTTCTTCATTGCTGGTTTGATATTTTTCATTTTCCAATCTCGACGGCGTGATGTGTGATTTGATTTCTGGATCATTTTCATTTCAATTTTCTCATCGCATCGAAATATGGATAGTTGCGAACAATTTTTGTTGATCACAATTTACGCGATATTTTTCATTCGGATGTTCTCTTATTCACAGTCATATGGACACTCGTAGTTGCTAAGTGTGTTCTCCCAGCGAGTAGCTTGTCGAATCCCTGAGTCGATACGTATTCATTCTAGGGTTTTTGTTTGTTGTTCTTCTTGATTTTATATACTGAAGTTCAAAGCTTCTTCGAGAGACTGAACCCGAGGTTTGAGTGCCTCATGGGATTGGGACTATTCCGAATATCGAGGAAGAAAGGGGTTTTAGTCCAACAAGTTGAAGAACCAGGAGGATGGAATTTCAATTGGGTTTGATTGAACAATCACTTAACAGTCGTTATTCTCTCTGGGTCCGTGAAGCTCTTAATGATTTATCGGATAATTTTACAATCACTGATCCCAGTATATCGGGTCACCCAATTGTGTTCGTGAGCCGTGGATTCTTGAAGATGACTGGATATACCAAAGAAGAGGTGATTGGAAAAAATGGGAGGATGTTTCAGGGCCCAAAAACTTGTAGGAGTTCAGTAATGCAAATTCGCGAGGCAATTAGGGAAGAGAAGGGGATTCAAATTAATTTGCTAAATTATCGTAAAGATGGTACACCCTTCTGGGTCTTTTTTCAACTGAGTCCTGTCTTCTGCAAGGAAGATGGGCGGATCATTCACTTTGTGGGTGTTCAGGTGCCGATATGGAAGAATTCAAGGAAATCTATATGTGGGTTCTCTAGAATTCAAGGTGTTCCTTATGAGAATGAATTTAGAGCGAGCAAAAGTCTTTTAGAGTCCTGCCGCCGGGAGTTGTTGTCTGATTCTATCTCGGAATTGGATTTTCTTTTGAACAGAGATTCACCACCGGATTCCGACATCAGAGGAGTAGACATTGAAGAACCATGTGAAGCTTGTGATGATGAGAAGCAAAGAGCTGCAATTGCTATTAGTAACATCTTATCTGTCCTAACTCATCACAGTGAGGTAACTGGAAGATTGGTGTGCGAAAGGAGATGCAGCGTGCCAAGGGTGGGCATTCTTTGTTCATCCTTGAATACATCTCTTAATAGAATTAAACAGAGCTTTGTATTAACCGATCCGAACTTACCAGACATGCCTATAGTTTATGCGAGCGACGAGTTTTTGAAATTAACAGGTTATACTAGACGTGAAGTGCTGGGGCGCAACTGTAGATTCTTAAGTGGAATTGACACGGATTCTTCAACCCTTTTTAAGATAAAGGAAAGTCTTCAATCTGAACAAGCTTGCACTGTGCGGATTTTAAATTACAGGAAAAATAAGAGCTCATTTTGGAATGATCTCCACATATCACCTGTTCGAAATGCTTCAGGAAAGGTAGCGTACTTTGTGGGTGTGCAGATGGATGAAGATGATAAAAAGCAGGATGAACATGGGTTGAACCCTAAGATGAAACAACTTAGCACCGTGGGTGCAGTCAGGGTGGCCGTGAGGAGCTTGTCCATGACTGTGGGATGTTCACGGGGCTAGCCTGTTCGTCTCGTTTTGAAAAGTAATATTAAATTTTCACTGTAATTACATCTCCTGAAGAGGTATATAAGAAAGATAAGACAGTAGATGTTCTTAAACGCTATTGTAAAGGTCTCATTTTTCTAATATGGAATGTGAAGCGTCTCAATTTTAAGTTGAAACGGTGGGCATTCTTTTGATTTATGTGTTAGCGGCTGTGTTTACCTTGTGGCTTATTAGTATGAGGGAATGTATTGAACTCACTGGACAAGCAAATACTTATGCCTACTTTGTTGTCCAAATGGTTTACCAGTCCTTTGCTAAAACCTGCTAGGTGAAGTTTAGATTGTTTCGTGGACTGATTAAAATTAAATATTATCATACCATAGTTTCTGATTGTTATATATCTGATTGTTATATATCCGTCAAATTTAGTATGCAAAGAACGTGCAATAAGAAAGATTCAATTAATGCAAACCAAATACAAAGAGGTTGATAAAAAGATGCTTTGGCGAATAGTTAACTCTCTCCCACGCATATCAGATTCACTGATACAAGTCATTTCATTCTCCGCCCACCTGAAAAATTTACCCTTCCATTCTGTTTGTCTCATGCCAGCTGAAAGATAAGAGCATTTGCAGCGCTTGTCAAGATTCTCTCCACTGGATGGAAGGCGGGAATGTCAATCTATTTGAATAAATCTGTGAAACCCTGTAAGTATTACTGCATCATATCTATATCTATATCTATCTATTGTCGTGCTTTTGGTCTGTACTTGTACTGCATAGCCCAAAATAGGTAGTGCACAAAGTTTAATCCACTGAGCACACACATCAACCAGTAGAATCTCTCAAGGTGATAATGGTTTAGATTTCTTCCCGACAGCCATGGCTGGTGGTCTGATCTATCTGTGACGTTGTTGATTATTGATATAACCACTGAGCTAAGATAGTACCCCATAGCCAGAGAAGCCCAGGATAGAGATGTAGCTAAGGATCTCATACTTGCAGGTGCTTCTGTGAAGAAAAATTCCAATGATCCAGCCAAGGAGAAAAGATCTGCTGATCCCAGAAACAAGTACTGGATGGCAATCCAAAGGAACGAGATGGGCAATGGCTGAGCCGAGTCGAGTAGACCGTGTTTGGTGGCTACTCTCTTGCGCTTAGTCTCAACAGCTGCTGCAACAGCCATGGCTCCAATAGAGAAAAGTAACCCAACTCCAATCCTCTGAAGATGAGTGATCCCCGTTTCAGTTTTTGTTATTCTCCGAGAAAACGGGATGATTAAGTGATCATATATCGGTGCAAGGAACATGATGAAGAGTATTGGGAATATAGGGAGAGATGCAGGTGGAACTTTAAAAGAACCTATTTTGGTGTCCATTGTTGATGCTTGTTCCACCGAAAATGTAGATAGCTGAGCTACACAGCAGTTGAGGATGATGGTGCAAGCAAATATTGCTTCCTTGTCATCAAGAGCCGGGCTCATCTCCATACTCGATATCGAGTTTCGTGAGTTCATGCCGATGCAGCAACCAAACATTGCAGCTACTAAAACCTGCTCTCAGTATTTTGTTGCGGTAAAGAGGGGAGCCTGCAAAGAACACAACCATGGACAGAACTATGCTGAGCATTGCAATTCCAAAGCCCCACTCCCAGCCTTTGTTGTCTTCAACCCACACCACCAAGGTGACTGCAATTAGCCCACCACATGACAGACAAAACACAAAGTAGTTGAAGAAACTGGATCTCCTTTTCCTGCCATGTGGGGTACTGTCGTCAAACTGCTCCGCCCCATGCGACGGCAGCGACCCTTTTATGCCACCGACTCCCAACGCCACCAGATATAGCCCAGAAAACAACATTGCTTCTTTACCACCGCTCGCTTCTTCGCACATGGTGCCATGGTTTGCGTGGCGATCGCATGGAGGAGGCATCAGCGATGGTATCTTGGCTTGTATCAGCAACACTGCCAATCCCTGCATAAATTCTTGGATTAGAGCTTCATTACTGTAATCATTACCTAAATCAAAGTTGATTACAACGTTAACTATGTTTTTATGTCAGAAGATATTGATTGTCAGATTGAAATGATAGGATCATAAGTAGTTGGAATGAGAGGAAATGCAAGGAGGCAGGTGTCAGTACTAAGCAATCATATTCCCTCACTGACACCAATGTGAACACACTTGAAGCCACGTGTTACTCTTTCCTCTCATCCTATT

Coding sequence (CDS)

ATGGAATTTCAATTGGGTTTGATTGAACAATCACTTAACAGTCGTTATTCTCTCTGGGTCCGTGAAGCTCTTAATGATTTATCGGATAATTTTACAATCACTGATCCCAGTATATCGGGTCACCCAATTGTGTTCGTGAGCCGTGGATTCTTGAAGATGACTGGATATACCAAAGAAGAGGTGATTGGAAAAAATGGGAGGATGTTTCAGGGCCCAAAAACTTGTAGGAGTTCAGTAATGCAAATTCGCGAGGCAATTAGGGAAGAGAAGGGGATTCAAATTAATTTGCTAAATTATCGTAAAGATGGTACACCCTTCTGGGTCTTTTTTCAACTGAGTCCTGTCTTCTGCAAGGAAGATGGGCGGATCATTCACTTTGTGGGTGTTCAGGTGCCGATATGGAAGAATTCAAGGAAATCTATATGTGGGTTCTCTAGAATTCAAGGTGTTCCTTATGAGAATGAATTTAGAGCGAGCAAAAGTCTTTTAGAGTCCTGCCGCCGGGAGTTGTTGTCTGATTCTATCTCGGAATTGGATTTTCTTTTGAACAGAGATTCACCACCGGATTCCGACATCAGAGGAGTAGACATTGAAGAACCATGTGAAGCTTGTGATGATGAGAAGCAAAGAGCTGCAATTGCTATTAGTAACATCTTATCTGTCCTAACTCATCACAGTGAGGTAACTGGAAGATTGGTGTGCGAAAGGAGATGCAGCGTGCCAAGGGTGGGCATTCTTTGTTCATCCTTGAATACATCTCTTAATAGAATTAAACAGAGCTTTGTATTAACCGATCCGAACTTACCAGACATGCCTATAGTTTATGCGAGCGACGAGTTTTTGAAATTAACAGGTTATACTAGACGTGAAGTGCTGGGGCGCAACTGTAGATTCTTAAGTGGAATTGACACGGATTCTTCAACCCTTTTTAAGATAAAGGAAAGTCTTCAATCTGAACAAGCTTGCACTGTGCGGATTTTAAATTACAGGAAAAATAAGAGCTCATTTTGGAATGATCTCCACATATCACCTGTTCGAAATGCTTCAGGAAAGGTAGCGTACTTTGTGGGTGTGCAGATGGATGAAGATGATAAAAAGCAGGATGAACATGGGTTGAACCCTAAGATGAAACAACTTAGCACCGTGGGTGCAGTCAGGGTGGCCGTGAGGAGCTTGTCCATGACTGTGGGATGTTCACGGGGCTAG

Protein sequence

MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKEDGRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDFLLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSVPRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLSGIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG

Homology

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy Swiss-Prot
Match: O64511 (Protein TWIN LOV 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=1 SV=2)

HSP 1 Score: 424.9 bits (1091), Expect = 1.0e-117
Identity = 223/394 (56.60%), Postives = 286/394 (72.59%), Query Frame = 0


Query: 9   EQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRM 68
           E S + RY+LW++EAL +L  NFTITDP ISGHPIVF S GFLKMTGY++EEVIG+NG++
Sbjct: 17  EDSFSGRYTLWIKEALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKV 76

Query: 69  FQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKEDGRIIHFVG 128
           FQGPKT R S+M+IREAIREE+ +Q++LLNYRK G+PFW+ F + PVF K+DG++ +FV 
Sbjct: 77  FQGPKTNRRSIMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVA 136

Query: 129 VQVPI--WKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDFLLNRDS 188
           VQVPI   ++ RK +     +           +     SCRRE+   +    D  L  + 
Sbjct: 137 VQVPISGREHHRKKLRNVGDLSS--------DTSPTFGSCRREVCFGNFVCQDRALPVEC 196

Query: 189 PPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSVPRVGIL 248
             D D +G++  E CEA + EK +A  AI+N+LS+L H+SE++GRLVC +R  +  V  L
Sbjct: 197 --DDDEQGLEDWEQCEASESEKLKATEAINNVLSILVHYSELSGRLVCGKRYCLRGVDCL 256

Query: 249 CSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLSGIDTDS 308
            SSL  SL RIKQSFVLT+P LPDMPI+YASD FL LTGY R+EVLG+NCRFLSG+DTDS
Sbjct: 257 SSSLVISLGRIKQSFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVDTDS 316

Query: 309 STLFKIKESLQSEQACTVRILNY--RKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDD 368
           S L+++KE +   Q+CTV+ILNY  RK+KSSFWN LHISPVRNASGK AYFVGVQ++   
Sbjct: 317 SVLYEMKECILKGQSCTVQILNYSNRKDKSSFWNLLHISPVRNASGKTAYFVGVQVEASC 376

Query: 369 KKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGC 399
           +  +   L P+ +QLS VGAVRVAVRS S+ V C
Sbjct: 377 RNTEIKELRPETRQLSVVGAVRVAVRS-SLMVTC 399

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy Swiss-Prot
Match: P93025 (Phototropin-2 OS=Arabidopsis thaliana OX=3702 GN=PHOT2 PE=1 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 1.3e-54
Identity = 133/386 (34.46%), Postives = 210/386 (54.40%), Query Frame = 0


Query: 15  RYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRMFQGPKT 74
           R S  ++ AL+ L   F ++D +    PIV+ S GF  MTGY+ +E++G+N R  QGP T
Sbjct: 119 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDT 178

Query: 75  CRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED-GRIIHFVGVQVPI 134
            ++ V +IR+ ++  K     LLNY+KDGTPFW    ++P+  K+D G  I F+G+QV +
Sbjct: 179 DKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPI--KDDQGNTIKFIGMQVEV 238

Query: 135 WKNSRKSICGFSRIQGVPYENEFRASKSLL--ESCRRELLSDSISE-LDFLLNRDS---- 194
            K +        R  G+        SKSL+  ++ ++E   DSI+E +  + +R S    
Sbjct: 239 SKYTEGVNDKALRPNGL--------SKSLIRYDARQKEKALDSITEVVQTIRHRKSQVQE 298

Query: 195 --------PPDSDIR---GVDIEEPCEACDDEKQRAAIAI---SNILSVLTHHSEVTGRL 254
                    PDS      G    +  EA    +    ++    S + S    H ++    
Sbjct: 299 SVSNDTMVKPDSSTTPTPGRQTRQSDEASKSFRTPGRVSTPTGSKLKSSNNRHEDLLRME 358

Query: 255 VCERRCSVPRVGILCS--------------SLNTSLNRIKQSFVLTDPNLPDMPIVYASD 314
             E   S   +G   S               L T+L RI+++FV++DP LPD PI++ASD
Sbjct: 359 PEELMLSTEVIGQRDSWDLSDRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASD 418

Query: 315 EFLKLTGYTRREVLGRNCRFLSGIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWN 365
            FL+LT Y+R E+LGRNCRFL G +TD +T+ KI+++++ ++  TV+++NY K+   FWN
Sbjct: 419 SFLELTEYSREEILGRNCRFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFWN 478

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy Swiss-Prot
Match: Q2RBR1 (Phototropin-1B OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT1B PE=1 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 3.1e-53
Identity = 134/406 (33.00%), Postives = 208/406 (51.23%), Query Frame = 0


Query: 15  RYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRMFQGPKT 74
           R S  +R AL+     F ++D +   HPI++ S GF  MTGYT +EV+G+N R  QG  T
Sbjct: 122 RVSEELRAALSVFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSGT 181

Query: 75  CRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKEDGRIIHFVGVQVPIW 134
               + +IR+++         +LNY+KDGTPFW    ++P+   EDGR++ F+G+QV + 
Sbjct: 182 DPHEIDKIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPI-KDEDGRLLKFIGMQVEVS 241

Query: 135 KNSRKSICGFSRIQGVP---------YENEFRAS-----------KSLLESCR------- 194
           K +        R  G+           ++  R+S           +SL ES         
Sbjct: 242 KYTEGKKDTVVRPNGLSESLIKYDARQKDHARSSVSELLLALKNPRSLSESSNNTLKRKS 301

Query: 195 RELLSDSISELDFLLNRDSPPDSDIRG---VDIEEPCEACDDEKQRAAIAISNILSVL-T 254
           +E LS S+SE+    + +S    + R      +++  E  D   +     +   +  L  
Sbjct: 302 QESLSMSMSEVPSKRSSESGSRRNSRSGTRSSLQKINEVPDQVNRTRKSGLRAFMGFLGM 361

Query: 255 HHSEVTGRLVCER--------------------RCSVPRVGILCSSLNTSLNRIKQSFVL 314
            H  V   ++  R                    R    R GI    L T+L RI+++FV+
Sbjct: 362 GHGSVEKNMLKPRDEDPLIDSDDERPESFEDEFRRKEMRRGI---DLATTLERIEKNFVI 421

Query: 315 TDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLSGIDTDSSTLFKIKESLQSEQACT 370
           TDP LPD PI++ASD FL+LT Y R E+LGRNCRFL G +TD +T+ KI++++ ++   T
Sbjct: 422 TDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATVRKIRDAIDNQAEVT 481

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy Swiss-Prot
Match: Q2QYY8 (Phototropin-1A OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT1A PE=1 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 5.3e-53
Identity = 133/406 (32.76%), Postives = 208/406 (51.23%), Query Frame = 0


Query: 15  RYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRMFQGPKT 74
           R S  +R AL+     F ++D +   HPI++ S GF  MTGYT +EV+G+N R  QG  T
Sbjct: 122 RVSEELRAALSAFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGSGT 181

Query: 75  CRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKEDGRIIHFVGVQVPIW 134
               + +IR+++         +LNY+KDGTPFW    ++P+   EDGR++ F+G+QV + 
Sbjct: 182 DPHEIDKIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPI-KDEDGRLLKFIGMQVEVS 241

Query: 135 KNSRKSICGFSRIQGVP---------YENEFRAS-----------KSLLESCR------- 194
           K +        R  G+           ++  R+S           +SL ES         
Sbjct: 242 KYTEGKKDTVVRPNGLSESLIKYDARQKDHARSSVSELLLALKNPRSLSESSNNTLKRKS 301

Query: 195 RELLSDSISELDFLLNRDSPPDSDIRG---VDIEEPCEACDDEKQRAAIAISNILSVL-T 254
           +E LS S++E+    + +S    + R      +++  E  D   +     +   +  L  
Sbjct: 302 QESLSMSMTEVPSKRSSESGSRRNSRSGTRSSLQKINEVPDQGNRTRKSGLRAFMGFLGM 361

Query: 255 HHSEVTGRLVCER--------------------RCSVPRVGILCSSLNTSLNRIKQSFVL 314
            H  V   ++  R                    R    R GI    L T+L RI+++FV+
Sbjct: 362 GHGSVEKNMLKPRDEDPLIDSDDERPESFEDEFRRKEMRRGI---DLATTLERIEKNFVI 421

Query: 315 TDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLSGIDTDSSTLFKIKESLQSEQACT 370
           TDP LPD PI++ASD FL+LT Y R E+LGRNCRFL G +TD +T+ KI++++ ++   T
Sbjct: 422 TDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATVRKIRDAIDNQAEVT 481

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy Swiss-Prot
Match: Q8LPD9 (Phototropin OS=Chlamydomonas reinhardtii OX=3055 GN=PHOT PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-52
Identity = 128/341 (37.54%), Postives = 184/341 (53.96%), Query Frame = 0


Query: 22  EALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRMFQGPKTCRSSVMQ 81
           + L  L   F + D ++   P+V+ S GF  MTGY  +EV+G N R  QG  T    V +
Sbjct: 13  KVLAGLRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQK 72

Query: 82  IREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKEDGRIIHFVGVQVPIW-KNSRKS 141
           IR+AI++ +   + LLNYRKDGTPFW    ++P+    DGR+  FVGVQV +  K   K+
Sbjct: 73  IRDAIKKGEACSVRLLNYRKDGTPFWNLLTVTPI-KTPDGRVSKFVGVQVDVTSKTEGKA 132

Query: 142 ICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDFLLNRDSPPDSDIRGVDIEEP 201
           +   S   GVP   ++     L ++  R ++ D    ++              GV   EP
Sbjct: 133 LADNS---GVPLLVKY--DHRLRDNVARTIVDDVTIAVE-----------KAEGV---EP 192

Query: 202 CEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSVPRVGILCSSLNTSLNRIKQS 261
            +A       +A+A +  L                   S PRV +    L T++ RI+Q+
Sbjct: 193 GQA-------SAVAAAAPLGAKGPRGTAPK--------SFPRVAL---DLATTVERIQQN 252

Query: 262 FVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLSGIDTDSSTLFKIKESLQSEQ 321
           F ++DP LPD PIV+ASD FL+LTGY+R EVLGRNCRFL G  TD  T+ +I+ +++   
Sbjct: 253 FCISDPTLPDCPIVFASDAFLELTGYSREEVLGRNCRFLQGAGTDRGTVDQIRAAIKEGS 312

Query: 322 ACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQMD 362
             TVRILNY K   +FWN   ++P+R+  G   +FVGVQ+D
Sbjct: 313 ELTVRILNYTKAGKAFWNMFTLAPMRDQDGHARFFVGVQVD 315

[Close]

BLAST of Cp4.1LG01g12740 vs. NCBI nr
Match: XP_023537915.1 (protein TWIN LOV 1 [Cucurbita pepo subsp. pepo] >XP_023537920.1 protein TWIN LOV 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 806 bits (2082), Expect = 1.60e-294
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE
Sbjct: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED
Sbjct: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF
Sbjct: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
           LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV
Sbjct: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
           PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG
Sbjct: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. NCBI nr
Match: XP_022999675.1 (protein TWIN LOV 1 [Cucurbita maxima] >XP_022999759.1 protein TWIN LOV 1 [Cucurbita maxima])

HSP 1 Score: 802 bits (2071), Expect = 7.60e-293
Identity = 398/401 (99.25%), Postives = 400/401 (99.75%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPS+SGHPIVFVSRGFLKMTGYTKEE
Sbjct: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSMSGHPIVFVSRGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED
Sbjct: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPIWKNSRKSICGF+RIQGVPYENEFRA KSLLESCRRELLSDSISELDF
Sbjct: 121 GRIIHFVGVQVPIWKNSRKSICGFARIQGVPYENEFRACKSLLESCRRELLSDSISELDF 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
           LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV
Sbjct: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
           PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG
Sbjct: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. NCBI nr
Match: KAG6601409.1 (Protein TWIN LOV 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 801 bits (2070), Expect = 1.08e-292
Identity = 399/401 (99.50%), Postives = 399/401 (99.50%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           MEFQL LIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE
Sbjct: 1   MEFQLDLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED
Sbjct: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRA KSLLESCRRELLSDSISELDF
Sbjct: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRACKSLLESCRRELLSDSISELDF 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
           LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV
Sbjct: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
           PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG
Sbjct: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. NCBI nr
Match: KAG7032188.1 (Protein TWIN LOV 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 798 bits (2062), Expect = 1.79e-291
Identity = 398/401 (99.25%), Postives = 398/401 (99.25%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           MEFQL LIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE
Sbjct: 1   MEFQLDLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED
Sbjct: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRA KSLLESCRRELLSDSISELDF
Sbjct: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRACKSLLESCRRELLSDSISELDF 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
           LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV
Sbjct: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
           PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIK SLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKLSLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG
Sbjct: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. NCBI nr
Match: XP_022956846.1 (protein TWIN LOV 1 [Cucurbita moschata] >XP_022956847.1 protein TWIN LOV 1 [Cucurbita moschata])

HSP 1 Score: 794 bits (2050), Expect = 1.21e-289
Identity = 395/401 (98.50%), Postives = 397/401 (99.00%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           MEFQLGLIEQSLNSRYSLWVREALNDLSDNFT+TDPSISGHPIVFVSRGFLKMTGYTKEE
Sbjct: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTLTDPSISGHPIVFVSRGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED
Sbjct: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPIWKNSRKSICGFSR QGVPYE EFRA KSLLESCRRELLSDSISELDF
Sbjct: 121 GRIIHFVGVQVPIWKNSRKSICGFSRTQGVPYEKEFRACKSLLESCRRELLSDSISELDF 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
           LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV
Sbjct: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
           PRVGILCSSLNTSLNRIKQSFVLTD NLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDLNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCS+G
Sbjct: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSQG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy TrEMBL
Match: A0A6J1KI06 (protein TWIN LOV 1 OS=Cucurbita maxima OX=3661 GN=LOC111493936 PE=4 SV=1)

HSP 1 Score: 802 bits (2071), Expect = 3.68e-293
Identity = 398/401 (99.25%), Postives = 400/401 (99.75%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPS+SGHPIVFVSRGFLKMTGYTKEE
Sbjct: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSMSGHPIVFVSRGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED
Sbjct: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPIWKNSRKSICGF+RIQGVPYENEFRA KSLLESCRRELLSDSISELDF
Sbjct: 121 GRIIHFVGVQVPIWKNSRKSICGFARIQGVPYENEFRACKSLLESCRRELLSDSISELDF 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
           LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV
Sbjct: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
           PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG
Sbjct: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy TrEMBL
Match: A0A6J1GXM3 (protein TWIN LOV 1 OS=Cucurbita moschata OX=3662 GN=LOC111458420 PE=4 SV=1)

HSP 1 Score: 794 bits (2050), Expect = 5.84e-290
Identity = 395/401 (98.50%), Postives = 397/401 (99.00%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           MEFQLGLIEQSLNSRYSLWVREALNDLSDNFT+TDPSISGHPIVFVSRGFLKMTGYTKEE
Sbjct: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTLTDPSISGHPIVFVSRGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED
Sbjct: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPIWKNSRKSICGFSR QGVPYE EFRA KSLLESCRRELLSDSISELDF
Sbjct: 121 GRIIHFVGVQVPIWKNSRKSICGFSRTQGVPYEKEFRACKSLLESCRRELLSDSISELDF 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
           LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV
Sbjct: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
           PRVGILCSSLNTSLNRIKQSFVLTD NLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDLNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCS+G
Sbjct: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSQG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy TrEMBL
Match: A0A5A7SYN9 (Protein TWIN LOV 1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00240 PE=4 SV=1)

HSP 1 Score: 717 bits (1852), Expect = 8.73e-260
Identity = 361/401 (90.02%), Postives = 375/401 (93.52%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           ME  LGLIEQSLNSRYSLWVREALN+LSDNFTITDPSI+GHPIVFVS GFLK TGYTKEE
Sbjct: 1   MELPLGLIEQSLNSRYSLWVREALNNLSDNFTITDPSIAGHPIVFVSPGFLKTTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGP+T RSSVM IREA+R+EK IQINLLNYRKDGTPFWVFFQ++PVF KED
Sbjct: 61  VIGKNGRMFQGPETSRSSVMLIREAVRQEKEIQINLLNYRKDGTPFWVFFQMTPVFSKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPI KNSRKS  GF RIQGV YENEFRA KS L SCRREL+SDSISELD 
Sbjct: 121 GRIIHFVGVQVPILKNSRKSRRGFLRIQGVSYENEFRACKSFLGSCRRELMSDSISELDC 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
            LNRD  PDSD RGV+IEEPCEACDDEKQRAAIAISNIL VLTHHSEVTG LVCERRCS+
Sbjct: 181 TLNRDPQPDSDSRGVEIEEPCEACDDEKQRAAIAISNILFVLTHHSEVTGGLVCERRCSL 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
            RVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTR EVLGRNCRFLS
Sbjct: 241 SRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRCEVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHG NPKM+QLSTVGAV+VAVRSLSMT+GCS+G
Sbjct: 361 DEDDKKQDEHGFNPKMRQLSTVGAVKVAVRSLSMTMGCSQG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy TrEMBL
Match: A0A1S3BFK1 (protein TWIN LOV 1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489085 PE=4 SV=1)

HSP 1 Score: 717 bits (1852), Expect = 8.73e-260
Identity = 361/401 (90.02%), Postives = 375/401 (93.52%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           ME  LGLIEQSLNSRYSLWVREALN+LSDNFTITDPSI+GHPIVFVS GFLK TGYTKEE
Sbjct: 1   MELPLGLIEQSLNSRYSLWVREALNNLSDNFTITDPSIAGHPIVFVSPGFLKTTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNGRMFQGP+T RSSVM IREA+R+EK IQINLLNYRKDGTPFWVFFQ++PVF KED
Sbjct: 61  VIGKNGRMFQGPETSRSSVMLIREAVRQEKEIQINLLNYRKDGTPFWVFFQMTPVFSKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           GRIIHFVGVQVPI KNSRKS  GF RIQGV YENEFRA KS L SCRREL+SDSISELD 
Sbjct: 121 GRIIHFVGVQVPILKNSRKSRRGFLRIQGVSYENEFRACKSFLGSCRRELMSDSISELDC 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
            LNRD  PDSD RGV+IEEPCEACDDEKQRAAIAISNIL VLTHHSEVTG LVCERRCS+
Sbjct: 181 TLNRDPQPDSDSRGVEIEEPCEACDDEKQRAAIAISNILFVLTHHSEVTGGLVCERRCSL 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
            RVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTR EVLGRNCRFLS
Sbjct: 241 SRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRCEVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           DEDDKKQDEHG NPKM+QLSTVGAV+VAVRSLSMT+GCS+G
Sbjct: 361 DEDDKKQDEHGFNPKMRQLSTVGAVKVAVRSLSMTMGCSQG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. ExPASy TrEMBL
Match: A0A0A0KSK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604290 PE=4 SV=1)

HSP 1 Score: 717 bits (1851), Expect = 1.24e-259
Identity = 359/401 (89.53%), Postives = 375/401 (93.52%), Query Frame = 0


Query: 1   MEFQLGLIEQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEE 60
           ME  LGLIEQSLNSRYSLWVREALNDLSDNFTITDP I+GHPIVFVS GFLKMTGYTKEE
Sbjct: 1   MELPLGLIEQSLNSRYSLWVREALNDLSDNFTITDPCIAGHPIVFVSPGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED 120
           VIGKNG+MFQGP+T RSSVM IREA+REEK IQINLLNYRKDGTPFWVFFQ++PVF KED
Sbjct: 61  VIGKNGKMFQGPETSRSSVMLIREAVREEKEIQINLLNYRKDGTPFWVFFQMTPVFSKED 120

Query: 121 GRIIHFVGVQVPIWKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDF 180
           G+IIHFVGVQVPI KNSRKS CGF RIQG  +ENEFRA KS L SCRREL+SDSISELD 
Sbjct: 121 GQIIHFVGVQVPILKNSRKSRCGFVRIQGDSHENEFRACKSFLGSCRRELMSDSISELDC 180

Query: 181 LLNRDSPPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSV 240
            LNRDS PDS+ RGV+IEEPCEACDDEKQRAAIAISNIL VLTHHSEVTG LVCERRCS+
Sbjct: 181 TLNRDSQPDSNSRGVEIEEPCEACDDEKQRAAIAISNILFVLTHHSEVTGGLVCERRCSL 240

Query: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLS 300
           PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTR EVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRCEVLGRNCRFLS 300

Query: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLH+SPV NASGK+AYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHVSPVHNASGKLAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGCSRG 401
           D DDKKQDEHGLNPK KQLSTVGAV+VAVRSLSMTVGCS+G
Sbjct: 361 DADDKKQDEHGLNPKTKQLSTVGAVKVAVRSLSMTVGCSQG 401

[Close]

BLAST of Cp4.1LG01g12740 vs. TAIR 10
Match: AT2G02710.2 (PAS/LOV protein B )

HSP 1 Score: 429.9 bits (1104), Expect = 2.3e-120
Identity = 223/392 (56.89%), Postives = 286/392 (72.96%), Query Frame = 0


Query: 9   EQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRM 68
           E S + RY+LW++EAL +L  NFTITDP ISGHPIVF S GFLKMTGY++EEVIG+NG++
Sbjct: 17  EDSFSGRYTLWIKEALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKV 76

Query: 69  FQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKEDGRIIHFVG 128
           FQGPKT R S+M+IREAIREE+ +Q++LLNYRK G+PFW+ F + PVF K+DG++ +FV 
Sbjct: 77  FQGPKTNRRSIMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVA 136

Query: 129 VQVPI--WKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDFLLNRDS 188
           VQVPI   ++ RK +     +           +     SCRRE+   +    D  L  + 
Sbjct: 137 VQVPISGREHHRKKLRNVGDLSS--------DTSPTFGSCRREVCFGNFVCQDRALPVEC 196

Query: 189 PPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSVPRVGIL 248
             D D +G++  E CEA + EK +A  AI+N+LS+L H+SE++GRLVC +R  +  V  L
Sbjct: 197 --DDDEQGLEDWEQCEASESEKLKATEAINNVLSILVHYSELSGRLVCGKRYCLRGVDCL 256

Query: 249 CSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLSGIDTDS 308
            SSL  SL RIKQSFVLT+P LPDMPI+YASD FL LTGY R+EVLG+NCRFLSG+DTDS
Sbjct: 257 SSSLVISLGRIKQSFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVDTDS 316

Query: 309 STLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDDKK 368
           S L+++KE +   Q+CTV+ILNYRK+KSSFWN LHISPVRNASGK AYFVGVQ++   + 
Sbjct: 317 SVLYEMKECILKGQSCTVQILNYRKDKSSFWNLLHISPVRNASGKTAYFVGVQVEASCRN 376

Query: 369 QDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGC 399
            +   L P+ +QLS VGAVRVAVRS S+ V C
Sbjct: 377 TEIKELRPETRQLSVVGAVRVAVRS-SLMVTC 397

[Close]

BLAST of Cp4.1LG01g12740 vs. TAIR 10
Match: AT2G02710.1 (PAS/LOV protein B )

HSP 1 Score: 424.9 bits (1091), Expect = 7.4e-119
Identity = 223/394 (56.60%), Postives = 286/394 (72.59%), Query Frame = 0


Query: 9   EQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRM 68
           E S + RY+LW++EAL +L  NFTITDP ISGHPIVF S GFLKMTGY++EEVIG+NG++
Sbjct: 17  EDSFSGRYTLWIKEALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKV 76

Query: 69  FQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKEDGRIIHFVG 128
           FQGPKT R S+M+IREAIREE+ +Q++LLNYRK G+PFW+ F + PVF K+DG++ +FV 
Sbjct: 77  FQGPKTNRRSIMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVA 136

Query: 129 VQVPI--WKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDFLLNRDS 188
           VQVPI   ++ RK +     +           +     SCRRE+   +    D  L  + 
Sbjct: 137 VQVPISGREHHRKKLRNVGDLSS--------DTSPTFGSCRREVCFGNFVCQDRALPVEC 196

Query: 189 PPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSVPRVGIL 248
             D D +G++  E CEA + EK +A  AI+N+LS+L H+SE++GRLVC +R  +  V  L
Sbjct: 197 --DDDEQGLEDWEQCEASESEKLKATEAINNVLSILVHYSELSGRLVCGKRYCLRGVDCL 256

Query: 249 CSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLSGIDTDS 308
            SSL  SL RIKQSFVLT+P LPDMPI+YASD FL LTGY R+EVLG+NCRFLSG+DTDS
Sbjct: 257 SSSLVISLGRIKQSFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVDTDS 316

Query: 309 STLFKIKESLQSEQACTVRILNY--RKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDD 368
           S L+++KE +   Q+CTV+ILNY  RK+KSSFWN LHISPVRNASGK AYFVGVQ++   
Sbjct: 317 SVLYEMKECILKGQSCTVQILNYSNRKDKSSFWNLLHISPVRNASGKTAYFVGVQVEASC 376

Query: 369 KKQDEHGLNPKMKQLSTVGAVRVAVRSLSMTVGC 399
           +  +   L P+ +QLS VGAVRVAVRS S+ V C
Sbjct: 377 RNTEIKELRPETRQLSVVGAVRVAVRS-SLMVTC 399

[Close]

BLAST of Cp4.1LG01g12740 vs. TAIR 10
Match: AT2G02710.3 (PAS/LOV protein B )

HSP 1 Score: 390.2 bits (1001), Expect = 2.0e-108
Identity = 198/345 (57.39%), Postives = 254/345 (73.62%), Query Frame = 0


Query: 9   EQSLNSRYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRM 68
           E S + RY+LW++EAL +L  NFTITDP ISGHPIVF S GFLKMTGY++EEVIG+NG++
Sbjct: 17  EDSFSGRYTLWIKEALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKV 76

Query: 69  FQGPKTCRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKEDGRIIHFVG 128
           FQGPKT R S+M+IREAIREE+ +Q++LLNYRK G+PFW+ F + PVF K+DG++ +FV 
Sbjct: 77  FQGPKTNRRSIMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVA 136

Query: 129 VQVPI--WKNSRKSICGFSRIQGVPYENEFRASKSLLESCRRELLSDSISELDFLLNRDS 188
           VQVPI   ++ RK +     +           +     SCRRE+   +    D  L  + 
Sbjct: 137 VQVPISGREHHRKKLRNVGDLSS--------DTSPTFGSCRREVCFGNFVCQDRALPVEC 196

Query: 189 PPDSDIRGVDIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSVPRVGIL 248
             D D +G++  E CEA + EK +A  AI+N+LS+L H+SE++GRLVC +R  +  V  L
Sbjct: 197 --DDDEQGLEDWEQCEASESEKLKATEAINNVLSILVHYSELSGRLVCGKRYCLRGVDCL 256

Query: 249 CSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRREVLGRNCRFLSGIDTDS 308
            SSL  SL RIKQSFVLT+P LPDMPI+YASD FL LTGY R+EVLG+NCRFLSG+DTDS
Sbjct: 257 SSSLVISLGRIKQSFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVDTDS 316

Query: 309 STLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGK 352
           S L+++KE +   Q+CTV+ILNYRK+KSSFWN LHISPVRNASGK
Sbjct: 317 SVLYEMKECILKGQSCTVQILNYRKDKSSFWNLLHISPVRNASGK 351

[Close]

BLAST of Cp4.1LG01g12740 vs. TAIR 10
Match: AT5G58140.4 (phototropin 2 )

HSP 1 Score: 215.3 bits (547), Expect = 8.9e-56
Identity = 133/386 (34.46%), Postives = 210/386 (54.40%), Query Frame = 0


Query: 15  RYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRMFQGPKT 74
           R S  ++ AL+ L   F ++D +    PIV+ S GF  MTGY+ +E++G+N R  QGP T
Sbjct: 119 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDT 178

Query: 75  CRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED-GRIIHFVGVQVPI 134
            ++ V +IR+ ++  K     LLNY+KDGTPFW    ++P+  K+D G  I F+G+QV +
Sbjct: 179 DKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPI--KDDQGNTIKFIGMQVEV 238

Query: 135 WKNSRKSICGFSRIQGVPYENEFRASKSLL--ESCRRELLSDSISE-LDFLLNRDS---- 194
            K +        R  G+        SKSL+  ++ ++E   DSI+E +  + +R S    
Sbjct: 239 SKYTEGVNDKALRPNGL--------SKSLIRYDARQKEKALDSITEVVQTIRHRKSQVQE 298

Query: 195 --------PPDSDIR---GVDIEEPCEACDDEKQRAAIAI---SNILSVLTHHSEVTGRL 254
                    PDS      G    +  EA    +    ++    S + S    H ++    
Sbjct: 299 SVSNDTMVKPDSSTTPTPGRQTRQSDEASKSFRTPGRVSTPTGSKLKSSNNRHEDLLRME 358

Query: 255 VCERRCSVPRVGILCS--------------SLNTSLNRIKQSFVLTDPNLPDMPIVYASD 314
             E   S   +G   S               L T+L RI+++FV++DP LPD PI++ASD
Sbjct: 359 PEELMLSTEVIGQRDSWDLSDRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASD 418

Query: 315 EFLKLTGYTRREVLGRNCRFLSGIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWN 365
            FL+LT Y+R E+LGRNCRFL G +TD +T+ KI+++++ ++  TV+++NY K+   FWN
Sbjct: 419 SFLELTEYSREEILGRNCRFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFWN 478

[Close]

BLAST of Cp4.1LG01g12740 vs. TAIR 10
Match: AT5G58140.2 (phototropin 2 )

HSP 1 Score: 215.3 bits (547), Expect = 8.9e-56
Identity = 133/386 (34.46%), Postives = 210/386 (54.40%), Query Frame = 0


Query: 15  RYSLWVREALNDLSDNFTITDPSISGHPIVFVSRGFLKMTGYTKEEVIGKNGRMFQGPKT 74
           R S  ++ AL+ L   F ++D +    PIV+ S GF  MTGY+ +E++G+N R  QGP T
Sbjct: 119 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDT 178

Query: 75  CRSSVMQIREAIREEKGIQINLLNYRKDGTPFWVFFQLSPVFCKED-GRIIHFVGVQVPI 134
            ++ V +IR+ ++  K     LLNY+KDGTPFW    ++P+  K+D G  I F+G+QV +
Sbjct: 179 DKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPI--KDDQGNTIKFIGMQVEV 238

Query: 135 WKNSRKSICGFSRIQGVPYENEFRASKSLL--ESCRRELLSDSISE-LDFLLNRDS---- 194
            K +        R  G+        SKSL+  ++ ++E   DSI+E +  + +R S    
Sbjct: 239 SKYTEGVNDKALRPNGL--------SKSLIRYDARQKEKALDSITEVVQTIRHRKSQVQE 298

Query: 195 --------PPDSDIR---GVDIEEPCEACDDEKQRAAIAI---SNILSVLTHHSEVTGRL 254
                    PDS      G    +  EA    +    ++    S + S    H ++    
Sbjct: 299 SVSNDTMVKPDSSTTPTPGRQTRQSDEASKSFRTPGRVSTPTGSKLKSSNNRHEDLLRME 358

Query: 255 VCERRCSVPRVGILCS--------------SLNTSLNRIKQSFVLTDPNLPDMPIVYASD 314
             E   S   +G   S               L T+L RI+++FV++DP LPD PI++ASD
Sbjct: 359 PEELMLSTEVIGQRDSWDLSDRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASD 418

Query: 315 EFLKLTGYTRREVLGRNCRFLSGIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWN 365
            FL+LT Y+R E+LGRNCRFL G +TD +T+ KI+++++ ++  TV+++NY K+   FWN
Sbjct: 419 SFLELTEYSREEILGRNCRFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFWN 478

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64511	1.0e-117	56.60	Protein TWIN LOV 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=1 SV=2	[more]
P93025	1.3e-54	34.46	Phototropin-2 OS=Arabidopsis thaliana OX=3702 GN=PHOT2 PE=1 SV=2	[more]
Q2RBR1	3.1e-53	33.00	Phototropin-1B OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT1B PE=1 SV=2	[more]
Q2QYY8	5.3e-53	32.76	Phototropin-1A OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT1A PE=1 SV=2	[more]
Q8LPD9	2.0e-52	37.54	Phototropin OS=Chlamydomonas reinhardtii OX=3055 GN=PHOT PE=1 SV=1	[more]

BLAST of Cp4.1LG01g12740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537915.1	1.60e-294	100.00	protein TWIN LOV 1 [Cucurbita pepo subsp. pepo] >XP_023537920.1 protein TWIN LOV...	[more]
XP_022999675.1	7.60e-293	99.25	protein TWIN LOV 1 [Cucurbita maxima] >XP_022999759.1 protein TWIN LOV 1 [Cucurb...	[more]
KAG6601409.1	1.08e-292	99.50	Protein TWIN LOV 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032188.1	1.79e-291	99.25	Protein TWIN LOV 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022956846.1	1.21e-289	98.50	protein TWIN LOV 1 [Cucurbita moschata] >XP_022956847.1 protein TWIN LOV 1 [Cucu...	[more]

BLAST of Cp4.1LG01g12740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KI06	3.68e-293	99.25	protein TWIN LOV 1 OS=Cucurbita maxima OX=3661 GN=LOC111493936 PE=4 SV=1	[more]
A0A6J1GXM3	5.84e-290	98.50	protein TWIN LOV 1 OS=Cucurbita moschata OX=3662 GN=LOC111458420 PE=4 SV=1	[more]
A0A5A7SYN9	8.73e-260	90.02	Protein TWIN LOV 1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BFK1	8.73e-260	90.02	protein TWIN LOV 1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489085 PE=4 SV=1	[more]
A0A0A0KSK8	1.24e-259	89.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604290 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g12740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02710.2	2.3e-120	56.89	PAS/LOV protein B	[more]
AT2G02710.1	7.4e-119	56.60	PAS/LOV protein B	[more]
AT2G02710.3	2.0e-108	57.39	PAS/LOV protein B	[more]
AT5G58140.4	8.9e-56	34.46	phototropin 2	[more]
AT5G58140.2	8.9e-56	34.46	phototropin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000014	PAS domain	SMART	SM00091	pas_2	coord: 248..321 e-value: 0.057 score: 22.6 coord: 18..87 e-value: 1.4 score: 17.9
IPR000014	PAS domain	TIGRFAM	TIGR00229	TIGR00229	coord: 273..369 e-value: 2.3E-11 score: 41.9 coord: 43..128 e-value: 9.7E-11 score: 39.9
IPR000014	PAS domain	PFAM	PF13426	PAS_9	coord: 41..131 e-value: 6.3E-17 score: 61.7 coord: 260..361 e-value: 2.7E-18 score: 66.1
IPR000014	PAS domain	PROSITE	PS50112	PAS	coord: 20..89 score: 11.036944
IPR000014	PAS domain	PROSITE	PS50112	PAS	coord: 273..295 score: 10.167795
IPR000014	PAS domain	CDD	cd00130	PAS	coord: 269..361 e-value: 2.09971E-8 score: 49.9391
IPR000014	PAS domain	CDD	cd00130	PAS	coord: 43..133 e-value: 1.80546E-7 score: 47.2427
IPR001610	PAC motif	SMART	SM00086	pac_2	coord: 323..365 e-value: 1.2E-6 score: 38.1 coord: 93..136 e-value: 0.0055 score: 25.9
None	No IPR available	GENE3D	3.30.450.20	PAS domain	coord: 30..168 e-value: 3.6E-37 score: 129.6 coord: 260..397 e-value: 1.5E-45 score: 156.8
None	No IPR available	PANTHER	PTHR47429:SF2	PROTEIN TWIN LOV 1	coord: 8..393
None	No IPR available	PANTHER	PTHR47429	PROTEIN TWIN LOV 1	coord: 8..393
IPR000700	PAS-associated, C-terminal	PROSITE	PS50113	PAC	coord: 320..374 score: 12.022626
IPR035965	PAS domain superfamily	SUPERFAMILY	55785	PYP-like sensor domain (PAS domain)	coord: 29..130
IPR035965	PAS domain superfamily	SUPERFAMILY	55785	PYP-like sensor domain (PAS domain)	coord: 261..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g12740.1	Cp4.1LG01g12740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009637	response to blue light
cellular_component	GO:0005634	nucleus
molecular_function	GO:0009881	photoreceptor activity