Cp4.1LG01g12240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g12240
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	FYN-binding protein isoform X1
Location	Cp4.1LG01: 8925633 .. 8929369 (-)
RNA-Seq Expression	Cp4.1LG01g12240
Synteny	Cp4.1LG01g12240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCATTGTTAGAGTTTAAAAGTTGACGAGCATTATTAGAATTTAGACGAGAAAACGGCGTGGTTCTGAAAATGTTTATGGTTTGTGCAAGACTGGTTGGGAAGGCAATTCTCGCGGCAAATGAGTCGAGGGAATGAATTCTCCGACGACGGAATAGAGGGTGTAACCGCCGTAGCAGCAGCCGCCTTTGCCATTCTTTCTGCTGAAGAATCGAGACCCAGAAAGAAGGTCGATCATCCTGAAACGTCGTCGTTCCAGAAGACAAAGAACGTCAAGGAGGACAATCGTACACCCCCTCCACGTCCGGCGCCGGAACCTGATAAGATTCCCCAGCCGTTCTCAGGTTTCTTAAATTTTCAATATAATTTTAACCCACATGGTTTACAATTCTGACATAAAAATATGGTTTCTAGCAAAATTTGGATTTGAATGTAATGATTGAGAAATATGGTGGCAGTAAACTCCGAACAACAAAAACAGAGACCAATAGAAAACAGAACCGATCCTTCTCCGGCCGCCATCAACCACATCTCCGGCGGCGGAAGAACAGAACCAGAGAGAGCAGTAGAAGTCCCTGGGAAGCCACAAACCCTGCCTTCTGAAACGAAAGCAGATCTGTGGGAAAAGGCAGAGCTGGGTAAAATCCAAGAAAGGTACTCTGTTCTTCTCCATTGCGAATCATATCTTAACGAACAATACCCATTACCAAAACTGGAGAAAATTTCAGATACCAGAAGGTGGACGAAAGAATTTGTTACTGGGAAAGCAAGAAGAAGGACAAAGCCATGCGCAAATTTGAAGCATCACAGGTTCATGAACCAGTTTATCTGTGTTTAATGTTTGTTAGAACAATTAAGACAGAGGCGACATTGATGAACAGTGATTGACTCTGTTTTAAACATTTGAAGGCTGAGGGAATGAAGAAGAGTAAGAGGATAAAGGGAAGAAGAAAGCTGGAGGAAGACATGGAGTAAATAAAGAAAATAGGAGGAGAAGCAAGAACCAAAGCAGAGCGGAAGAAGAAGAAGGANAAATAAAGAAAATAGGAGGAGAAGCAAGAACCAAAGCAGAGCGGAAGAAGAAGAAGGAGATTCTGAAGGCTAAGCAGAGAGCAGATATTATCAGACAGACAGGGAAGCTTCCCCTTGCTTGCTGCTGCTGCTGCTGATGAACATTGATAGCTATGTTGATCTTCTCTTATTTTGTACGCTTAACTACTGAATGAATGCTTTGAGAACAAAAGTAATCAATAATTCAAGTTTCTGTCAGATGGGTTTTCTGTTTTAGTGTGTGTGTGTGTGTGTGGTAGGTAGAAGAAGCGGCTCTCTATAGCGCTGCGCGTCCCTACTCTTGATGCCGTCCATTAATCACTCCCATTCAAGATTCACGCTCCTTTACTCCTTACTATATAGCCCTTTCTACTACTTCCCTTCATTCAACCTCCGGAAATGTCAACTTCCGATCAGCCCTCCGGCGACCTCACCCATGTTGCTCTGTTCCCAAGTGCTGGTATGGGCCATCTTGTTCCCTTTCTCAGACTGGCTGCCGCTCTCCTCCGTCATCACTGCAAGCTTACCCTCATCACTTCTCATCCTGCCGTCTCTTCTGCTGAGTCGCAACTCATTTCCCGATTCCTCTCTGCTTTCCCCCAAATCACTGAGCTCAAGTTCCATATCGTACCTCTTGACCCTCTTGTCGCGAACTCCGATGACCCTTTTTTTCTTCAATTTGAAGCCATTCGTCGATCGGTTCATCTTCTCACTTCTCCCCTTTCTGCCCTCTCTCCGCCTCTGTCCGCCCTTGTCTGTGATGTGAGCTTGATTTCCTCTGCTCTTGCGCTTTCTGCGACCCTTAAGATACCCAATTACGTGCTCTTCACCTCCTCTGCTATAATGTTTTCTCTCTTTGCCTATTACCCGTTTGTTAAAATGTCTGACCCATCTGGCGATTTGATTCACATTCCTGCGATTGGGTCAATTCCCAAAACGTCGCTCCCTCCTCCCCTGCTTGTCGATAATAGCATCTTCAAGAAAATTTTTACGCAAGATGGTCGCAGGATCAAAGAACTGAATGGGGTTTTGATCAATGCGATGGACGCAATGGAAGGAGATACTGTCGCTGCACTCAACAGTGGGAAGGTACTGGATGGATTGCCGCCAGTGGTACCCATAGGACCATTGCTGCCATGTGAGTTTGAGAATCCAGAGGGGAGGTCTCCCATAAAATGGCTGGAGAAGTTACCTCCCAGATCGGTGGTTTTCGCGAGCTTCGGCAGCCGGACCGCCGCTTCAAGAGAGCAAATCAAAGAGATCGGAATTGGGTTGGCTTCGAGTGGGTACAAATTCCTGTGGGTAGTGAAAGATAAAGTGGTGGACAAGGAAGACAAAGAGGGGTTAGAGGAGGTAGTGGGGGAAGAACTGATGGAGAAATTGAAGGAGAAGGGGATGGTATTGAAGGAATGGGTAAATCAGGAGGAAATTTTGGGGCACAGAGCGGTGGGTGGGTTTGTGAGCCATTGTGGGTGGAACTCGGTGATGGAAGCGGCGTTGAAGGGGGTGCCAGTTTTGGCGTGGCCTCAAAACGGGGACCAGATGATCAATGCAGGATTGGTTGCAAAGAAAGGGGTTGGAATGTGGGTTGAAAAATGGGGATGGGGCCATAAATGTGTGGTGAAGGGCGAGGAACTTGGTGGGAGGATTAAGGAGCTGATGGAGAGTGATGTCTTGAGAGCACGAGCTGCAGAGCTTAAAGAGGAGGCGGCGAAGGCTGTGGCTGTGGGAGGAAGCTGTGACAGAGCAATTGAAGGGCTGATTGGAAGGTGGAGCAAGGGCGTCTGAAGAAGGGCTGTTCAAAGGTTGTCTAGGATTAAGATATAGAATAAGATAGAAATTATGAATAATATAAGAAGTGGCTAATCATTTAGACTTGTTTTAGTCATGTGGATCTGAATAAAAATTAGCCCTAAACTCTAATTAGATACCGAAATTGGACTGAAATTTTCTTTATTATGGGGTGAAACTTCTTTCTAGAGGGCGTGTTTTAAAATTTTTAGGGAAAGCGAAAAGAGACAATATATGTTAATTATGGGTTATTGCCCAATGTTTTAAAGGAGAAAAACAAAATATGACATATGCATTTGTAGCGTCGTACGCTACTCGTCCGCGGCACATACAGAGGGCAAGCGGCAAAAGACCTCAGTCACATCCCTCATCGAGACCACACAAGGACAAAGCGGGGGTGGGAGTTGATTTAAGGGAGCTTACTGGTTGAGGAAGCAAGAAGGAGCTCGGGTTGTCAAAGGGAGAAGCTGTCGAAGATTTGAGACCAAAAACCACGCTCGCTAGAGGAACTCACGCTCTACAGTCACAGGCGTTCGACGATTGATTTTGAACTGAAACAAACCAAAACGGAAAATCGGACGCCCAAAGAACATTTAGGTATGTTTATGGATTTTCGAGAGCTTTTACAGTTAGATTCGCCCCTACCTTCGTGGTTTAACCCGATTTCATCTACTATAGATTCATGAGAGGACAATCTACGTCTTTATCGCAGAAAGCAACTAGAGTTATGTCCAATTCAACGAGAAACGAATGCGAGAAGGTTTGAGTTACAAATGGTATCAGAGCCAGACACTAGGTGGTGTGCTGGCGAGGACGCTAGCCTCCGAGAGAGGTGAATTGTAAAATCTCATATCGATTATCGATTGGAGAGGAGAACAAAACATTCTTGTTTTAAAA

mRNA sequence

GAGCATTGTTAGAGTTTAAAAGTTGACGAGCATTATTAGAATTTAGACGAGAAAACGGCGTGGTTCTGAAAATGTTTATGGTTTGTGCAAGACTGGTTGGGAAGGCAATTCTCGCGGCAAATGAGTCGAGGGAATGAATTCTCCGACGACGGAATAGAGGGTGTAACCGCCGTAGCAGCAGCCGCCTTTGCCATTCTTTCTGCTGAAGAATCGAGACCCAGAAAGAAGGTCGATCATCCTGAAACGTCGTCGTTCCAGAAGACAAAGAACGTCAAGGAGGACAATCGTACACCCCCTCCACGTCCGGCGCCGGAACCTGATAAGATTCCCCAGCCGTTCTCAGTAAACTCCGAACAACAAAAACAGAGACCAATAGAAAACAGAACCGATCCTTCTCCGGCCGCCATCAACCACATCTCCGGCGGCGGAAGAACAGAACCAGAGAGAGCAGTAGAAGTCCCTGGGAAGCCACAAACCCTGCCTTCTGAAACGAAAGCAGATCTGTGGGAAAAGGCAGAGCTGGGTAAAATCCAAGAAAGATACCAGAAGGTGGACGAAAGAATTTGTTACTGGGAAAGCAAGAAGAAGGACAAAGCCATGCGCAAATTTGAAGCATCACAGGCTGAGGGAATGAAGAAGAGTAAGAGGATAAAGGGAAGAAGAAAGCTGGAGGAAGACATGGAGTAAATAAAGAAAATAGGAGGAGAAGCAAGAACCAAAGCAGAGCGGAAGAAGAAGAAGGANAAATAAAGAAAATAGGAGGAGAAGCAAGAACCAAAGCAGAGCGGAAGAAGAAGAAGGAGATTCTGAAGGCTAAGCAGAGAGCAGATATTATCAGACAGACAGGGAAGCTTCCCCTTGCTTGCTGCTGCTGCTGCTGATGAACATTGATAGCTATGTTGATCTTCTCTTATTTTGTACGCTTAACTACTGAATGAATGCTTTGAGAACAAAAGTAATCAATAATTCAAGTTTCTGTCAGATGGGTTTTCTGTTTTAGTGTGTGTGTGTGTGTGTGGTAGGTAGAAGAAGCGGCTCTCTATAGCGCTGCGCGTCCCTACTCTTGATGCCGTCCATTAATCACTCCCATTCAAGATTCACGCTCCTTTACTCCTTACTATATAGCCCTTTCTACTACTTCCCTTCATTCAACCTCCGGAAATGTCAACTTCCGATCAGCCCTCCGGCGACCTCACCCATGTTGCTCTGTTCCCAAGTGCTGGTATGGGCCATCTTGTTCCCTTTCTCAGACTGGCTGCCGCTCTCCTCCGTCATCACTGCAAGCTTACCCTCATCACTTCTCATCCTGCCGTCTCTTCTGCTGAGTCGCAACTCATTTCCCGATTCCTCTCTGCTTTCCCCCAAATCACTGAGCTCAAGTTCCATATCGTACCTCTTGACCCTCTTGTCGCGAACTCCGATGACCCTTTTTTTCTTCAATTTGAAGCCATTCGTCGATCGGTTCATCTTCTCACTTCTCCCCTTTCTGCCCTCTCTCCGCCTCTGTCCGCCCTTGTCTGTGATGTGAGCTTGATTTCCTCTGCTCTTGCGCTTTCTGCGACCCTTAAGATACCCAATTACGTGCTCTTCACCTCCTCTGCTATAATGTTTTCTCTCTTTGCCTATTACCCGTTTGTTAAAATGTCTGACCCATCTGGCGATTTGATTCACATTCCTGCGATTGGGTCAATTCCCAAAACGTCGCTCCCTCCTCCCCTGCTTGTCGATAATAGCATCTTCAAGAAAATTTTTACGCAAGATGGTCGCAGGATCAAAGAACTGAATGGGGTTTTGATCAATGCGATGGACGCAATGGAAGGAGATACTGTCGCTGCACTCAACAGTGGGAAGGTACTGGATGGATTGCCGCCAGTGGTACCCATAGGACCATTGCTGCCATGTGAGTTTGAGAATCCAGAGGGGAGGTCTCCCATAAAATGGCTGGAGAAGTTACCTCCCAGATCGGTGGTTTTCGCGAGCTTCGGCAGCCGGACCGCCGCTTCAAGAGAGCAAATCAAAGAGATCGGAATTGGGTTGGCTTCGAGTGGGTACAAATTCCTGTGGGTAGTGAAAGATAAAGTGGTGGACAAGGAAGACAAAGAGGGGTTAGAGGAGGTAGTGGGGGAAGAACTGATGGAGAAATTGAAGGAGAAGGGGATGGTATTGAAGGAATGGGTAAATCAGGAGGAAATTTTGGGGCACAGAGCGGTGGGTGGGTTTGTGAGCCATTGTGGGTGGAACTCGGTGATGGAAGCGGCGTTGAAGGGGGTGCCAGTTTTGGCGTGGCCTCAAAACGGGGACCAGATGATCAATGCAGGATTGGTTGCAAAGAAAGGGGTTGGAATGTGGGTTGAAAAATGGGGATGGGGCCATAAATGTGTGGTGAAGGGCGAGGAACTTGGTGGGAGGATTAAGGAGCTGATGGAGAGTGATGTCTTGAGAGCACGAGCTGCAGAGCTTAAAGAGGAGGCGGCGAAGGCTGTGGCTGTGGGAGGAAGCTGTGACAGAGCAATTGAAGGGCTGATTGGAAGGTGGAGCAAGGGCGTCTGAAGAAGGGCTGTTCAAAGAGGGCAAGCGGCAAAAGACCTCAGTCACATCCCTCATCGAGACCACACAAGGACAAAGCGGGGGTGGGAGTTGATTTAAGGGAGCTTACTGGTTGAGGAAGCAAGAAGGAGCTCGGGTTGTCAAAGGGAGAAGCTGTCGAAGATTTGAGACCAAAAACCACGCTCGCTAGAGGAACTCACGCTCTACAGTCACAGGCGTTCGACGATTGATTTTGAACTGAAACAAACCAAAACGGAAAATCGGACGCCCAAAGAACATTTAGATTCATGAGAGGACAATCTACGTCTTTATCGCAGAAAGCAACTAGAGTTATGTCCAATTCAACGAGAAACGAATGCGAGAAGGTTTGAGTTACAAATGGTATCAGAGCCAGACACTAGGTGGTGTGCTGGCGAGGACGCTAGCCTCCGAGAGAGGTGAATTGTAAAATCTCATATCGATTATCGATTGGAGAGGAGAACAAAACATTCTTGTTTTAAAA

Coding sequence (CDS)

ATGAGTCGAGGGAATGAATTCTCCGACGACGGAATAGAGGGTGTAACCGCCGTAGCAGCAGCCGCCTTTGCCATTCTTTCTGCTGAAGAATCGAGACCCAGAAAGAAGGTCGATCATCCTGAAACGTCGTCGTTCCAGAAGACAAAGAACGTCAAGGAGGACAATCGTACACCCCCTCCACGTCCGGCGCCGGAACCTGATAAGATTCCCCAGCCGTTCTCAGTAAACTCCGAACAACAAAAACAGAGACCAATAGAAAACAGAACCGATCCTTCTCCGGCCGCCATCAACCACATCTCCGGCGGCGGAAGAACAGAACCAGAGAGAGCAGTAGAAGTCCCTGGGAAGCCACAAACCCTGCCTTCTGAAACGAAAGCAGATCTGTGGGAAAAGGCAGAGCTGGGTAAAATCCAAGAAAGATACCAGAAGGTGGACGAAAGAATTTGTTACTGGGAAAGCAAGAAGAAGGACAAAGCCATGCGCAAATTTGAAGCATCACAGGCTGAGGGAATGAAGAAGAGTAAGAGGATAAAGGGAAGAAGAAAGCTGGAGGAAGACATGGAGTAA

Protein sequence

MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPPRPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTLPSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGRRKLEEDME

Homology

[Close]

BLAST of Cp4.1LG01g12240 vs. NCBI nr
Match: XP_023513093.1 (uncharacterized protein LOC111777635 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361 bits (927), Expect = 1.30e-125
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPP 60
           MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPP
Sbjct: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPP 60

Query: 61  RPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTL 120
           RPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTL
Sbjct: 61  RPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTL 120

Query: 121 PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180
           PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR
Sbjct: 121 PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180

Query: 181 RKLEEDME 188
           RKLEEDME
Sbjct: 181 RKLEEDME 188

[Close]

BLAST of Cp4.1LG01g12240 vs. NCBI nr
Match: XP_022957366.1 (uncharacterized protein LOC111458788 [Cucurbita moschata])

HSP 1 Score: 337 bits (863), Expect = 3.36e-115
Identity = 177/188 (94.15%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPP 60
           MSRGNEF DDGIEGVTAVAAAAFAILS EES P K VDHPETSSFQKTKNVKEDNRTPPP
Sbjct: 1   MSRGNEFPDDGIEGVTAVAAAAFAILSVEESGPIKNVDHPETSSFQKTKNVKEDNRTPPP 60

Query: 61  RPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTL 120
           RPAPEPDKIPQPFSVNSEQ+KQRPIE  T+PSPAAIN+ISGGGRTEPERAV VPGKPQTL
Sbjct: 61  RPAPEPDKIPQPFSVNSEQEKQRPIEYTTNPSPAAINNISGGGRTEPERAVAVPGKPQTL 120

Query: 121 PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180
           PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR
Sbjct: 121 PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180

Query: 181 RKLEEDME 188
           RKLEEDME
Sbjct: 181 RKLEEDME 188

[Close]

BLAST of Cp4.1LG01g12240 vs. NCBI nr
Match: XP_022984121.1 (uncharacterized protein At3g61260-like [Cucurbita maxima])

HSP 1 Score: 328 bits (841), Expect = 7.81e-112
Identity = 172/188 (91.49%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPP 60
           MSRGNEF DDGIEGVTAVAAAAFAILS EESRP K VD+PETSSFQKTKNVKEDNRT PP
Sbjct: 1   MSRGNEFPDDGIEGVTAVAAAAFAILSVEESRPTKNVDNPETSSFQKTKNVKEDNRTHPP 60

Query: 61  RPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTL 120
           RPAPE DKIPQPFSVNSEQQKQRPIE  TDP PAA+NHISGGGRT+PE  VEVPGKPQT 
Sbjct: 61  RPAPEHDKIPQPFSVNSEQQKQRPIEKTTDPPPAAVNHISGGGRTKPETEVEVPGKPQTW 120

Query: 121 PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180
           PSETKADLWEKAE+GKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR
Sbjct: 121 PSETKADLWEKAEMGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180

Query: 181 RKLEEDME 188
           RKLEEDME
Sbjct: 181 RKLEEDME 188

[Close]

BLAST of Cp4.1LG01g12240 vs. NCBI nr
Match: KAG7032245.1 (Heparanase-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325 bits (833), Expect = 3.30e-105
Identity = 174/190 (91.58%), Postives = 178/190 (93.68%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPP 60
           MSRGNEF DDGIEGVTAVAAAA+AILS EES P K VDHPETS FQKTKNVKEDNRTP P
Sbjct: 404 MSRGNEFPDDGIEGVTAVAAAAYAILSVEESGPIKNVDHPETSLFQKTKNVKEDNRTPTP 463

Query: 61  RPAPEPDKIPQPFSV--NSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQ 120
           RPAPEPDKIPQPFSV  NSEQ+KQRPIE  T+PSPAAIN+ISGGGRTEPERAV VPGKPQ
Sbjct: 464 RPAPEPDKIPQPFSVTVNSEQEKQRPIEYTTNPSPAAINNISGGGRTEPERAVAVPGKPQ 523

Query: 121 TLPSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIK 180
           TLPSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIK
Sbjct: 524 TLPSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIK 583

Query: 181 GRRKLEEDME 188
           GRRKLEEDME
Sbjct: 584 GRRKLEEDME 593

[Close]

BLAST of Cp4.1LG01g12240 vs. NCBI nr
Match: KAG6601463.1 (hypothetical protein SDJN03_06696, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308 bits (788), Expect = 2.93e-103
Identity = 163/176 (92.61%), Postives = 167/176 (94.89%), Query Frame = 0


Query: 13  EGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPPRPAPEPDKIPQP 72
           EGVTAVAAAA+AILS EES P K VDHPETS FQKTKNVKEDNRTP PRPAPEPDKIPQP
Sbjct: 48  EGVTAVAAAAYAILSVEESGPIKNVDHPETSLFQKTKNVKEDNRTPTPRPAPEPDKIPQP 107

Query: 73  FSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTLPSETKADLWEKA 132
           FSVNSEQ+KQRPIE  T+PSPAAIN+ISGGGRTEPERAV VPGKPQTLPSETKADLWEKA
Sbjct: 108 FSVNSEQEKQRPIEYTTNPSPAAINNISGGGRTEPERAVAVPGKPQTLPSETKADLWEKA 167

Query: 133 ELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGRRKLEEDME 188
           ELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGRRKLEEDME
Sbjct: 168 ELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGRRKLEEDME 223

[Close]

BLAST of Cp4.1LG01g12240 vs. ExPASy TrEMBL
Match: A0A6J1GZ10 (uncharacterized protein LOC111458788 OS=Cucurbita moschata OX=3662 GN=LOC111458788 PE=3 SV=1)

HSP 1 Score: 337 bits (863), Expect = 1.63e-115
Identity = 177/188 (94.15%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPP 60
           MSRGNEF DDGIEGVTAVAAAAFAILS EES P K VDHPETSSFQKTKNVKEDNRTPPP
Sbjct: 1   MSRGNEFPDDGIEGVTAVAAAAFAILSVEESGPIKNVDHPETSSFQKTKNVKEDNRTPPP 60

Query: 61  RPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTL 120
           RPAPEPDKIPQPFSVNSEQ+KQRPIE  T+PSPAAIN+ISGGGRTEPERAV VPGKPQTL
Sbjct: 61  RPAPEPDKIPQPFSVNSEQEKQRPIEYTTNPSPAAINNISGGGRTEPERAVAVPGKPQTL 120

Query: 121 PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180
           PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR
Sbjct: 121 PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180

Query: 181 RKLEEDME 188
           RKLEEDME
Sbjct: 181 RKLEEDME 188

[Close]

BLAST of Cp4.1LG01g12240 vs. ExPASy TrEMBL
Match: A0A6J1J4C0 (uncharacterized protein At3g61260-like OS=Cucurbita maxima OX=3661 GN=LOC111482516 PE=3 SV=1)

HSP 1 Score: 328 bits (841), Expect = 3.78e-112
Identity = 172/188 (91.49%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEESRPRKKVDHPETSSFQKTKNVKEDNRTPPP 60
           MSRGNEF DDGIEGVTAVAAAAFAILS EESRP K VD+PETSSFQKTKNVKEDNRT PP
Sbjct: 1   MSRGNEFPDDGIEGVTAVAAAAFAILSVEESRPTKNVDNPETSSFQKTKNVKEDNRTHPP 60

Query: 61  RPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTEPERAVEVPGKPQTL 120
           RPAPE DKIPQPFSVNSEQQKQRPIE  TDP PAA+NHISGGGRT+PE  VEVPGKPQT 
Sbjct: 61  RPAPEHDKIPQPFSVNSEQQKQRPIEKTTDPPPAAVNHISGGGRTKPETEVEVPGKPQTW 120

Query: 121 PSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180
           PSETKADLWEKAE+GKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR
Sbjct: 121 PSETKADLWEKAEMGKIQERYQKVDERICYWESKKKDKAMRKFEASQAEGMKKSKRIKGR 180

Query: 181 RKLEEDME 188
           RKLEEDME
Sbjct: 181 RKLEEDME 188

[Close]

BLAST of Cp4.1LG01g12240 vs. ExPASy TrEMBL
Match: A0A5A7SUY0 (Altered inheritance of mitochondria protein 3 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G004660 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 3.29e-63
Identity = 124/221 (56.11%), Postives = 150/221 (67.87%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEES---RPRKKVDHPETSSFQKTKNVKEDNRT 60
           MSRGNEFSDDGIE V AVAAA FAI   EES   +P KK+D P++S+  + + V+EDNRT
Sbjct: 1   MSRGNEFSDDGIERVAAVAAAVFAIHLVEESEFSKPLKKIDRPKSSTLPRIRIVEEDNRT 60

Query: 61  PPPRPAPEPDKIPQPFSVN----------------SEQQKQRPIENRTDPSPAAINHISG 120
           PPPRPAPEPD+I +PFS++                +EQQKQ+P  N T PSP  +   SG
Sbjct: 61  PPPRPAPEPDRILRPFSIDVAKNPEEATGEKPAAKTEQQKQKPTGNITFPSPPVVYDYSG 120

Query: 121 G-GRTEPERAVEVPGKP-------------QTLPSETKADLWEKAELGKIQERYQKVDER 180
             GRTE E+ + +P  P             QT P ETKADLWEKAEL KIQERYQKV+E 
Sbjct: 121 DRGRTETEKPLPIPRPPTPPISRKPPTTPIQTRPEETKADLWEKAELAKIQERYQKVNET 180

Query: 181 ICYWESKKKDKAMRKFEASQAEGMKKSKRIKGRRKLEEDME 188
           I YWE+KK++KA+RKFEASQ  G K+S+R KGR+K EEDME
Sbjct: 181 ISYWETKKREKAIRKFEASQVLGTKRSEREKGRKKFEEDME 221

[Close]

BLAST of Cp4.1LG01g12240 vs. ExPASy TrEMBL
Match: A0A1S4DW06 (altered inheritance of mitochondria protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 3.29e-63
Identity = 124/221 (56.11%), Postives = 150/221 (67.87%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEES---RPRKKVDHPETSSFQKTKNVKEDNRT 60
           MSRGNEFSDDGIE V AVAAA FAI   EES   +P KK+D P++S+  + + V+EDNRT
Sbjct: 1   MSRGNEFSDDGIERVAAVAAAVFAIHLVEESEFSKPLKKIDRPKSSTLPRIRIVEEDNRT 60

Query: 61  PPPRPAPEPDKIPQPFSVN----------------SEQQKQRPIENRTDPSPAAINHISG 120
           PPPRPAPEPD+I +PFS++                +EQQKQ+P  N T PSP  +   SG
Sbjct: 61  PPPRPAPEPDRILRPFSIDVAKNPEEATGEKPAAKTEQQKQKPTGNITFPSPPVVYDYSG 120

Query: 121 G-GRTEPERAVEVPGKP-------------QTLPSETKADLWEKAELGKIQERYQKVDER 180
             GRTE E+ + +P  P             QT P ETKADLWEKAEL KIQERYQKV+E 
Sbjct: 121 DRGRTETEKPLPIPRPPTPPISRKPPTTPIQTRPEETKADLWEKAELAKIQERYQKVNET 180

Query: 181 ICYWESKKKDKAMRKFEASQAEGMKKSKRIKGRRKLEEDME 188
           I YWE+KK++KA+RKFEASQ  G K+S+R KGR+K EEDME
Sbjct: 181 ISYWETKKREKAIRKFEASQVLGTKRSEREKGRKKFEEDME 221

[Close]

BLAST of Cp4.1LG01g12240 vs. ExPASy TrEMBL
Match: A0A1S3BFP8 (FYN-binding protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 1.67e-62
Identity = 124/221 (56.11%), Postives = 150/221 (67.87%), Query Frame = 0


Query: 1   MSRGNEFSDDGIEGVTAVAAAAFAILSAEES---RPRKKVDHPETSSFQKTKNVKEDNRT 60
           MSRGNEFSDDGIE V AVAAA FAI   EES   +P KK+D P++S+  + + V+EDNRT
Sbjct: 56  MSRGNEFSDDGIERVAAVAAAVFAIHLVEESEFSKPLKKIDRPKSSTLPRIRIVEEDNRT 115

Query: 61  PPPRPAPEPDKIPQPFSVN----------------SEQQKQRPIENRTDPSPAAINHISG 120
           PPPRPAPEPD+I +PFS++                +EQQKQ+P  N T PSP  +   SG
Sbjct: 116 PPPRPAPEPDRILRPFSIDVAKNPEEATGEKPAAKTEQQKQKPTGNITFPSPPVVYDYSG 175

Query: 121 G-GRTEPERAVEVPGKP-------------QTLPSETKADLWEKAELGKIQERYQKVDER 180
             GRTE E+ + +P  P             QT P ETKADLWEKAEL KIQERYQKV+E 
Sbjct: 176 DRGRTETEKPLPIPRPPTPPISRKPPTTPIQTRPEETKADLWEKAELAKIQERYQKVNET 235

Query: 181 ICYWESKKKDKAMRKFEASQAEGMKKSKRIKGRRKLEEDME 188
           I YWE+KK++KA+RKFEASQ  G K+S+R KGR+K EEDME
Sbjct: 236 ISYWETKKREKAIRKFEASQVLGTKRSEREKGRKKFEEDME 276

[Close]

BLAST of Cp4.1LG01g12240 vs. TAIR 10
Match: AT1G13920.1 (Remorin family protein )

HSP 1 Score: 51.6 bits (122), Expect = 8.0e-07
Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = 0


Query: 47  KTKNVKEDNRTPPPRPAPEPDKIPQPFSVNSEQQKQRPIENRTDPSPAAINHISGGGRTE 106
           K     E+      +P  EP +I  P    SE +   P      P P  ++      R  
Sbjct: 169 KQNQDSEEKHERQRKPVSEPPRIQPPLRTRSEPRAPPP------PPPPLLS--PSPLRLP 228

Query: 107 PERAVEVPGKPQTLPSETKADLWEKAELGKIQERYQKVDERICYWESKKKDKAMRKFEAS 166
           P        +  +   ++ AD WEKAEL KI+ RY+K++ +I  WE+KK++KA RK + S
Sbjct: 229 PRETKRQSSEHTSRKDDSTADAWEKAELSKIKARYEKLNRKIDLWEAKKREKARRKLDIS 288

Query: 167 QAEGMKKSKRIKGRRKLEEDME 189
           +   +++ +R +G ++  ED E
Sbjct: 289 EQSELEQ-RRKRGLQRFREDTE 301

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12240 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g12240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513093.1	1.30e-125	100.00	uncharacterized protein LOC111777635 [Cucurbita pepo subsp. pepo]	[more]
XP_022957366.1	3.36e-115	94.15	uncharacterized protein LOC111458788 [Cucurbita moschata]	[more]
XP_022984121.1	7.81e-112	91.49	uncharacterized protein At3g61260-like [Cucurbita maxima]	[more]
KAG7032245.1	3.30e-105	91.58	Heparanase-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601463.1	2.93e-103	92.61	hypothetical protein SDJN03_06696, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG01g12240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ10	1.63e-115	94.15	uncharacterized protein LOC111458788 OS=Cucurbita moschata OX=3662 GN=LOC1114587...	[more]
A0A6J1J4C0	3.78e-112	91.49	uncharacterized protein At3g61260-like OS=Cucurbita maxima OX=3661 GN=LOC1114825...	[more]
A0A5A7SUY0	3.29e-63	56.11	Altered inheritance of mitochondria protein 3 isoform X3 OS=Cucumis melo var. ma...	[more]
A0A1S4DW06	3.29e-63	56.11	altered inheritance of mitochondria protein 3 isoform X3 OS=Cucumis melo OX=3656...	[more]
A0A1S3BFP8	1.67e-62	56.11	FYN-binding protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g12240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13920.1	8.0e-07	29.58	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 123..177 e-value: 7.6E-8 score: 32.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..127
None	No IPR available	PANTHER	PTHR31471	OS02G0116800 PROTEIN	coord: 1..84
None	No IPR available	PANTHER	PTHR31471:SF51	REMORIN FAMILY PROTEIN	coord: 87..188
None	No IPR available	PANTHER	PTHR31471:SF51	REMORIN FAMILY PROTEIN	coord: 1..84
None	No IPR available	PANTHER	PTHR31471	OS02G0116800 PROTEIN	coord: 87..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g12240.1	Cp4.1LG01g12240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress