Cp4.1LG01g11890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g11890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Squamosa promoter-binding-like protein 16
Location	Cp4.1LG01: 5787938 .. 5789740 (-)
RNA-Seq Expression	Cp4.1LG01g11890
Synteny	Cp4.1LG01g11890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTTGAGACTCAGGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGGTGAGTTTAAATGTTTAGAACATCAATATCTGCAATTTGGTTCATTAATTCTGCCTTGGGTTAATTTTCATGATTTTCTTGTCGGATTGAAATAATTTGAGTTAGGCATATAGGATATCTTAAACTTGTTGCTTTTCATCTTGTACTTGGAAACTTATCCATATTTTTCATGGATAGGATATACTTGGAAACATTCCCTCATGGATATATTTTAAAATGTGCTAATGTTTTTGCCTTTTACCAGATGGTTGAATCAGTGTTGGATGCAAATATTTGTGAGATACTTACATTTTGTGTTTCTTTTACTTCTTATCTTTGTATGGTTGGTTCCCTTCTTGGCATTCGTTTCAGTTCCCTTAACATGTGCTTGTAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTTTGTATTATTATTAGTTTAGGCTTGGTTTCCCTGGTCCGATCCAATTGAATTCTCTTCCATGCTTCCAAGAATTCCATGACTGTTCCCAATGTTTACATTGTTGTTTCGTTGTCGAATGATGAACCAGTGCGAAGTACATACGACTTGTTTGTGCAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCTGCCTGGATCATTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCACCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGTTCGGAAACGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTATGGTCTCGGACGGTAGCAGCCATGGCAACATACGGTGCTACCCGACGTTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGGTATTGAAACATGAAAGTTGGGTCATTCTTGTAGGTTCTGAGATAGATTTATGTAATATGCCTATTCTCTTCAGGATTTAACTCAGCCACTGTTAACCTTCCAATCTCTGCTTGCTTCTTTTGTTCTGTGAGTTTTAAGGAATGCTGTTGTGTTGTGTGTGAAATGTCTGTTTCGATGTTTTTACTTTGTTCAGACTTGAGATTTGGAATATTAATTTTGTGCCTCTTTTCAGTTCCTCTTCTCTTGGAATAGTCAAAATAGTTGATTTTGGTTATGGATCATATGAT

mRNA sequence

ATGTATTTGAGACTCAGGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCTGCCTGGATCATTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCACCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGTTCGGAAACGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTATGGTCTCGGACGGTAGCAGCCATGGCAACATACGGTGCTACCCGACGTTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGGTATTGAAACATGAAAGTTGGGTCATTCTTGTAGGTTCTGAGATAGATTTATGTAATATGCCTATTCTCTTCAGGATTTAACTCAGCCACTGTTAACCTTCCAATCTCTGCTTGCTTCTTTTGTTCTGTGAGTTTTAAGGAATGCTGTTGTGTTGTGTGTGAAATGTCTGTTTCGATGTTTTTACTTTGTTCAGACTTGAGATTTGGAATATTAATTTTGTGCCTCTTTTCAGTTCCTCTTCTCTTGGAATAGTCAAAATAGTTGATTTTGGTTATGGATCATATGAT

Coding sequence (CDS)

ATGTATTTGAGACTCAGGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCTGCCTGGATCATTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCACCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGTTCGGAAACGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTATGGTCTCGGACGGTAGCAGCCATGGCAACATACGGTGCTACCCGACGTTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGGTATTGA

Protein sequence

MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSSVDLFRY

Homology

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.0e-46
Identity = 127/302 (42.05%), Postives = 147/302 (48.68%), Query Frame = 0


Query: 3   LRLRGIGNMGDGSM--------DDMKG-------TRVSLIESSASRLMKRSRAPGSGPQV 62
           L+L G+G  G G          +  KG       T  +   SSA     R  A     Q 
Sbjct: 56  LKLGGLGEFGGGGAQPRVAVAGEPAKGKGPAAAATGAAAAASSAPAKRPRGAAAAGQQQC 115

Query: 63  PSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRK 122
           PSC VDGC  DLSKCRDYHRRHKVCE HSKTP V + G+E RFCQQCSRFH L EFD+ K
Sbjct: 116 PSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAK 175

Query: 123 RSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMI 182
           RSCRKRLDGHNRRRRKPQP  M  N+  +L   QG RF PF      A+    +SW GMI
Sbjct: 176 RSCRKRLDGHNRRRRKPQPDPM--NSASYLASQQGARFSPF------ATPRPEASWTGMI 235

Query: 183 KPESN-------APLCSGNSQFDF------GDRRKSMLLPGSL-------ACDYKEKQLA 242
           K E +        PL   + Q  F      G RR   L  G +       A      Q A
Sbjct: 236 KTEESPYYTHHQIPLGISSRQQHFVGSTSDGGRRFPFLQEGEISFGTGAGAGGVPMDQAA 295

Query: 243 ISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGS-DQFFNSDCALSLLSTPVEPGEI 269
            +       P      P        G    K+F +G   Q  +SDCALSLLS P     I
Sbjct: 296 AAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGLTQVLDSDCALSLLSAPANSTAI 349

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-43
Identity = 129/338 (38.17%), Postives = 167/338 (49.41%), Query Frame = 0


Query: 14  GSMDDMKGTRVSLIESSASRLMKRSRAPGSG----PQVPSCMVDGCSSDLSKCRDYHRRH 73
           G M + +         +A+   KR R  G G     Q PSC VDGC +DL KCRDYHRRH
Sbjct: 64  GGMGECEPGAARREREAAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRH 123

Query: 74  KVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATM 133
           KVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP TM
Sbjct: 124 KVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM 183

Query: 134 TLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSW-IGMIKPESN-------APLCSGNSQ 193
              +  F+   QG RF PF +  L A      SW  G++K E +        PL S +S 
Sbjct: 184 A--SASFIASQQGTRFSPFAHPRLEA------SWPPGVMKTEESPYHITHQIPLGSSSS- 243

Query: 194 FDFGDRRKSMLLPGSLACDY----------KEKQLAISCIPIGLLPKSSDA-HPFLDV-- 253
                R++  +  G+    Y          +E +++ +   +   P ++ A  P L    
Sbjct: 244 ----SRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTGA 303

Query: 254 -ESSNGENVQKVFGN-GSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD 313
              S+G    K+F + G  +  +SDCALSLLS P      N S +  S ++ P   +   
Sbjct: 304 PSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPA-----NSSGIDVSRMVRPTEHV--- 363

Query: 314 GLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSSV 325
                  P+    V  G   G+   +P  Q    GS V
Sbjct: 364 -------PMAQQPVVPGLQFGSASWFPRPQASTGGSFV 373

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-43
Identity = 129/339 (38.05%), Postives = 167/339 (49.26%), Query Frame = 0


Query: 14  GSMDDMKGTRVSLIESSASRLMKRSRAPGSG-----PQVPSCMVDGCSSDLSKCRDYHRR 73
           G M + +         +A+   KR R  G G      Q PSC VDGC +DL KCRDYHRR
Sbjct: 64  GGMGECEPGAARREREAAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRADLGKCRDYHRR 123

Query: 74  HKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT 133
           HKVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP T
Sbjct: 124 HKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDT 183

Query: 134 MTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSW-IGMIKPESN-------APLCSGNS 193
           M   +  F+   QG RF PF +  L A      SW  G++K E +        PL S +S
Sbjct: 184 MA--SASFIASQQGTRFSPFAHPRLEA------SWPPGVMKTEESPYHITHQIPLGSSSS 243

Query: 194 QFDFGDRRKSMLLPGSLACDY----------KEKQLAISCIPIGLLPKSSDA-HPFLDV- 253
                 R++  +  G+    Y          +E +++ +   +   P ++ A  P L   
Sbjct: 244 -----SRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTG 303

Query: 254 --ESSNGENVQKVFGN-GSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHS 313
               S+G    K+F + G  +  +SDCALSLLS P      N S +  S ++ P   +  
Sbjct: 304 APSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPA-----NSSGIDVSRMVRPTEHV-- 363

Query: 314 DGLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSSV 325
                   P+    V  G   G+   +P  Q    GS V
Sbjct: 364 --------PMAQQPVVPGLQFGSASWFPRPQASTGGSFV 374

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.2e-40
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 0


Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.2e-40
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 0


Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]

BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: XP_023523671.1 (squamosa promoter-binding-like protein 16 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 676 bits (1744), Expect = 1.92e-245
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF
Sbjct: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV
Sbjct: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 329
           SDGSSHGNIRCYPTFQDGLAGSSVDLFRY
Sbjct: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 329

[Close]

BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: XP_022954373.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata])

HSP 1 Score: 661 bits (1705), Expect = 1.63e-239
Identity = 324/329 (98.48%), Postives = 325/329 (98.78%), Query Frame = 0


Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDFGDRRKSML PGSLACDYKEKQLAISCIPIGLLPKSSDA PFLDVESSNGENVQKV 
Sbjct: 181 QFDFGDRRKSML-PGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVL 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSG+V
Sbjct: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 329
           SDGSSH NIRCYPTFQDGLAGSSVDLFRY
Sbjct: 301 SDGSSHANIRCYPTFQDGLAGSSVDLFRY 328

[Close]

BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: XP_023523642.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523650.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 655 bits (1690), Expect = 1.63e-236
Identity = 329/372 (88.44%), Postives = 329/372 (88.44%), Query Frame = 0


Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSR------------------------ 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSR                        
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRWLNQCWMQIFVRYLHFVFLLLLIF 120

Query: 121 -------------------FHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFL 180
                              FHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFL
Sbjct: 121 VWLVPFLAFVSVPLTCACRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFL 180

Query: 181 YGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGSL 240
           YGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGSL
Sbjct: 181 YGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGSL 240

Query: 241 ACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSDQFFNSDCALSLL 300
           ACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSDQFFNSDCALSLL
Sbjct: 241 ACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSDQFFNSDCALSLL 300

Query: 301 STPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSSHGNIRCYPTFQD 329
           STPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSSHGNIRCYPTFQD
Sbjct: 301 STPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSSHGNIRCYPTFQD 360

[Close]

BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: XP_022991355.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima])

HSP 1 Score: 647 bits (1669), Expect = 5.02e-234
Identity = 315/329 (95.74%), Postives = 321/329 (97.57%), Query Frame = 0


Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQ+PSCMVDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQIPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAP+CSGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPVCSGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDFGDRRKSML PGSLACDYKEKQ+AISCIP+GLLPKSSDA P+LDVES N  NVQKV 
Sbjct: 181 QFDFGDRRKSML-PGSLACDYKEKQVAISCIPVGLLPKSSDARPYLDVESCNRGNVQKVL 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNG DQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSG+V
Sbjct: 241 GNGPDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 329
           SDGSSH NIRCYPTFQDGLAGSSVDLFRY
Sbjct: 301 SDGSSHANIRCYPTFQDGLAGSSVDLFRY 328

[Close]

BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: KAG6576133.1 (Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 645 bits (1663), Expect = 1.12e-231
Identity = 316/323 (97.83%), Postives = 318/323 (98.45%), Query Frame = 0


Query: 6   RGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 65
           +GIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY
Sbjct: 63  KGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 122

Query: 66  HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 125
           HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ
Sbjct: 123 HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 182

Query: 126 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 185
           PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG
Sbjct: 183 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 242

Query: 186 DRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSD 245
           DRRKSML PGSLACDYKEKQLAISCIPIGLLPKSSDA PFLDVESSNGENVQKV GNGSD
Sbjct: 243 DRRKSML-PGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSD 302

Query: 246 QFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSS 305
           QFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSG+VSDGSS
Sbjct: 303 QFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSS 362

Query: 306 HGNIRCYPTFQDGLAGSSVDLFR 328
           H N RCYPTFQDGLAGSSVDLFR
Sbjct: 363 HANSRCYPTFQDGLAGSSVDLFR 384

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy TrEMBL
Match: A0A6J1GQX7 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456630 PE=4 SV=1)

HSP 1 Score: 661 bits (1705), Expect = 7.90e-240
Identity = 324/329 (98.48%), Postives = 325/329 (98.78%), Query Frame = 0


Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDFGDRRKSML PGSLACDYKEKQLAISCIPIGLLPKSSDA PFLDVESSNGENVQKV 
Sbjct: 181 QFDFGDRRKSML-PGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVL 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSG+V
Sbjct: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 329
           SDGSSH NIRCYPTFQDGLAGSSVDLFRY
Sbjct: 301 SDGSSHANIRCYPTFQDGLAGSSVDLFRY 328

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy TrEMBL
Match: A0A6J1JSQ0 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488017 PE=4 SV=1)

HSP 1 Score: 647 bits (1669), Expect = 2.43e-234
Identity = 315/329 (95.74%), Postives = 321/329 (97.57%), Query Frame = 0


Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQ+PSCMVDGCSSDLS
Sbjct: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQIPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAP+CSGNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPVCSGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDFGDRRKSML PGSLACDYKEKQ+AISCIP+GLLPKSSDA P+LDVES N  NVQKV 
Sbjct: 181 QFDFGDRRKSML-PGSLACDYKEKQVAISCIPVGLLPKSSDARPYLDVESCNRGNVQKVL 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNG DQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSG+V
Sbjct: 241 GNGPDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 329
           SDGSSH NIRCYPTFQDGLAGSSVDLFRY
Sbjct: 301 SDGSSHANIRCYPTFQDGLAGSSVDLFRY 328

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy TrEMBL
Match: A0A6J1GST7 (squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456630 PE=4 SV=1)

HSP 1 Score: 640 bits (1652), Expect = 6.53e-232
Identity = 314/319 (98.43%), Postives = 315/319 (98.75%), Query Frame = 0


Query: 11  MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK 70
           MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK
Sbjct: 1   MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK 60

Query: 71  VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 130
           VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT
Sbjct: 61  VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 120

Query: 131 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS 190
           LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS
Sbjct: 121 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS 180

Query: 191 MLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSDQFFNS 250
           ML PGSLACDYKEKQLAISCIPIGLLPKSSDA PFLDVESSNGENVQKV GNGSDQFFNS
Sbjct: 181 ML-PGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNS 240

Query: 251 DCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSSHGNIR 310
           DCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSG+VSDGSSH NIR
Sbjct: 241 DCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANIR 300

Query: 311 CYPTFQDGLAGSSVDLFRY 329
           CYPTFQDGLAGSSVDLFRY
Sbjct: 301 CYPTFQDGLAGSSVDLFRY 318

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy TrEMBL
Match: A0A6J1JQH9 (squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488017 PE=4 SV=1)

HSP 1 Score: 627 bits (1616), Expect = 2.01e-226
Identity = 305/319 (95.61%), Postives = 311/319 (97.49%), Query Frame = 0


Query: 11  MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK 70
           MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQ+PSCMVDGCSSDLSKCRDYHRRHK
Sbjct: 1   MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQIPSCMVDGCSSDLSKCRDYHRRHK 60

Query: 71  VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 130
           VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT
Sbjct: 61  VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 120

Query: 131 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS 190
           LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAP+CSGNSQFDFGDRRKS
Sbjct: 121 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPVCSGNSQFDFGDRRKS 180

Query: 191 MLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSDQFFNS 250
           ML PGSLACDYKEKQ+AISCIP+GLLPKSSDA P+LDVES N  NVQKV GNG DQFFNS
Sbjct: 181 ML-PGSLACDYKEKQVAISCIPVGLLPKSSDARPYLDVESCNRGNVQKVLGNGPDQFFNS 240

Query: 251 DCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSSHGNIR 310
           DCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSG+VSDGSSH NIR
Sbjct: 241 DCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANIR 300

Query: 311 CYPTFQDGLAGSSVDLFRY 329
           CYPTFQDGLAGSSVDLFRY
Sbjct: 301 CYPTFQDGLAGSSVDLFRY 318

[Close]

BLAST of Cp4.1LG01g11890 vs. ExPASy TrEMBL
Match: A0A5D3DM54 (Squamosa promoter-binding-like protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002310 PE=4 SV=1)

HSP 1 Score: 595 bits (1534), Expect = 9.16e-214
Identity = 293/329 (89.06%), Postives = 307/329 (93.31%), Query Frame = 0


Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MY  LRGIGNM + SMDDMKGTRV+LIESS+SRLMKRSRAPGSG QVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSAS+DVSSSWIGMIKPE+NAPLC GNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDF DRRKSML PGSL+ DYKEKQLAISCIPIGLLPKSSD  PFL+V SSNG NVQKV 
Sbjct: 181 QFDFTDRRKSML-PGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVL 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNGS++FF+SDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DP++SG+V
Sbjct: 241 GNGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 329
           SDGSS  NIRCY TFQDG  GSS DLFR+
Sbjct: 301 SDGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]

BLAST of Cp4.1LG01g11890 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-41
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 0


Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]

BLAST of Cp4.1LG01g11890 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-41
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 0


Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]

BLAST of Cp4.1LG01g11890 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-41
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 0


Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]

BLAST of Cp4.1LG01g11890 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-33
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 29  SSASRLMKRSRAPGSGP--QVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQ 88
           SS  R  +R R  GSG   Q+P C V+GC  DL+  + Y+ RH+VC +HSKTPKVT+ G 
Sbjct: 51  SSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGI 110

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFL 148
           EQRFCQQCSRFH L EFD  KRSCR+RL GHN RRRKPQPA++++ A R  YG   P   
Sbjct: 111 EQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASR--YGRIAPSLY 170

Query: 149 PFGNQLLSAS 157
             G+  ++ S
Sbjct: 171 ENGDAGMNGS 178

[Close]

BLAST of Cp4.1LG01g11890 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-31
Identity = 68/142 (47.89%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 17  DDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHS 76
           +D+    ++L+  S     K++++ G   QVP C +DGC  DLS  +DYHR+H+VCE HS
Sbjct: 144 NDLSAVSMNLLTPSVV-ARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHS 203

Query: 77  KTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRF 136
           K PKV + G E+RFCQQCSRFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+ R 
Sbjct: 204 KCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERV 263

Query: 137 LYGNQGPRFLPFGNQLLSASND 159
               Q    L  G  L + S +
Sbjct: 264 FDRRQHTSMLWNGLSLNTRSEE 283

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g11890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YZE8	3.0e-46	42.05	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I55	1.1e-43	38.17	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	1.4e-43	38.05	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
B9DI20	4.2e-40	40.19	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	4.2e-40	40.19	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]

BLAST of Cp4.1LG01g11890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523671.1	1.92e-245	100.00	squamosa promoter-binding-like protein 16 isoform X3 [Cucurbita pepo subsp. pepo...	[more]
XP_022954373.1	1.63e-239	98.48	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata]	[more]
XP_023523642.1	1.63e-236	88.44	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_022991355.1	5.02e-234	95.74	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima]	[more]
KAG6576133.1	1.12e-231	97.83	Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Cp4.1LG01g11890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQX7	7.90e-240	98.48	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1JSQ0	2.43e-234	95.74	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GST7	6.53e-232	98.43	squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita moschata OX=36...	[more]
A0A6J1JQH9	2.01e-226	95.61	squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A5D3DM54	9.16e-214	89.06	Squamosa promoter-binding-like protein 16 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Cp4.1LG01g11890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	3.0e-41	40.19	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	3.0e-41	40.19	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	3.0e-41	40.19	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	2.3e-33	54.62	squamosa promoter binding protein-like 9	[more]
AT1G27370.1	2.1e-31	47.89	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 41..111 e-value: 1.6E-32 score: 113.4
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 48..129
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 50..123 e-value: 7.3E-29 score: 99.9
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 47..124 score: 31.718283
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 42..123 e-value: 4.0E-36 score: 121.2
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 3..316
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 3..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g11890.1	Cp4.1LG01g11890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding