Cp4.1LG01g11860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g11860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	agamous-like MADS-box protein AGL9 homolog
Location	Cp4.1LG01: 5782719 .. 5785746 (-)
RNA-Seq Expression	Cp4.1LG01g11860
Synteny	Cp4.1LG01g11860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGGGAATGAGGTGTAACCCTAGATGAGAGGGGATGAGAGGAGATGAGAGGAGATGAGATGAGAGCATAAAAGAAGGAAAAGAAAAGAAAGAAAGAAAAAAAAGGATGGGGGGGTTTTGTGTTGTTAGTTTAGTTTGTGGGAGAGAGAGAGAGAGAGGAGGTCGGAGAAAGCTGTGAAGAATATAAATAGAAAGGCACATAGGATAGGTTAAGCAAGTAAAGAGGAAAGAAGGAGAGGAAAAACAAAGATGGGAAGAGGGAGAGTAGAGCTGAAGAGAATAGAAAACAAGATCAATAGGCAAGTCACCTTCGCTAAACGGAGAAATGGGGTTTTGAAGAAAGCTTATGAGCTCTCCGTTCTGTGCGATGCCGAAGTTGCTCTCATCATCTTCTCCAATAGAGGAAAGCTCTACGAGTTTTGCAGTAGTTCAAGGTATGTCATCACTTTTAACAAACTTAACTTCAATCATTCTACTTTGTTTTGTTTTTTTTTTTTTTAAAGCAGTTTCAACCCAACCATTCCCTCAGATCTGCTCCTTCTCTTCTGTTTCTAAATTTTTGGTATCCCATTTTCCCCCATACTTTCCCTTTTCCTTTTTTTCTCTTTCTCCTCTTTCTTTTTAACCCTTTTCATGCTAACTTCTTTTCTTTTTCCTTTTCAAAATTTAAATTTAAATTAAATTAGGGTTTTCTTCTCAACCCCTTTTCTTTGCTTCTCCTTCTTTCTTTCTCTATGGGGCGATGGATGGATCAATTTAAAGCTCAACCTCACGCTTTCTTATACTTTGCATTTCTCAAATTAGGGTTCTTCTTTTTTTCTCCCACTAATTTAGAGTTTGGTTTCTTTCTTTTTCTCCCTTTATGGGATTTTTGTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTGCCTCCCATTGTATTTGTGAACCCAAACGAGAGTTAATTATAACTAGGTTTACTTTTTTCTTCTTTTTTTTTGGGAAAAAAAATTAGAATCTTATGTATATGTCAGAACCCAGAAATGGATTTATGCAATTAACCATCTTTGTTTTTTGTATTTTGAAGCTCACAAATGGTTTTCACCTTTACTCACACAAACATCCTTCATTATATGTAATTTATTTGTTCTAATAACTACTCATGTTTGTAAGGTTAGATTATAGAAAATGCCTCTAAAAGTTGAATTAATTGTTTTTAGTTTATATTATTATTATTACGTGTGAAATCCAGCATGCTGAAAACATTAGAGAGATACCAGAAATGCAACTATGGAGCACCAGAGGCGAATGTGTCCACAAGAGAGGCCTTGGTAATCACTCTTACTTTTCAGTTATCCATTTTCATTTAATTATTTTATGTTTTCAATTTCTAATTTGAAAAATGTGTCCGAAAATGAAAATGAGTATATGGATGGGTTAAATATAGGAAGTGAGCAGCCAGCAGGAGTATTTGAAGCTTAAAGCTCGCTACGAAGCTCTGCAACGATCCCAAAGGCAATATAATAACCCCACCCTTTTATAGTCCTTTTACTTTCCATCTTTACTCATACGTAAATGGTAATTGAATTAAGCAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCCCTTGAAAGGCAACTTGATATGTCACTCAAGCACATAAGGTCAACAAGGGTAATTCTTCTTCAAACTTCAACTTCAAACCTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATTCCTTTTCAATCCTTTTTCAGACTCAGTACATGTTAGATCAACTCACCGATCTTCAACGTAAGGTATTTCTATTCTATTTCCATCCTTCAACTTTCCTTATTCTTTCATGTTTCTTAACCAATTTAAATTAACCATCTTTTGTTTGTTTCAACTTTCACTTTCAGGAGCATCTTCTTAACGACGCAAACAGGACTCTGAAACAAAGGGTATATCTTTTTAAATTAAAAAAAAAAAAGAAAAAAAGAAAAAAAAGGAAAATGTTGGTGGTTTTGTAATTGGTGTTTAAGTTTTGGATTGCAGTTAGTAGAAGGGTATCAAGTAAATGCTCTCCAATTGAACCAAAGTGGTGATGATATGATGTATGGAAGACACCAAGCTCACCCTCCACCCGATGCCTTCTTCCATCTTTTAGATGCCGAACCCACCTTACAAATTGGGTAAATATTCTTCTATTCTGTCCACAATCTTTCATCCTATATTTCCTTTTCCATTCTTTTTATTTATTTATTAACTCAATTATGTATGTTTGAGAACTCAACATTTCCTTCCTACCTACATCACATATTTATGTACAATACTCTTGTTTCTTCTACTTTGTGTTTCTTCTACTTTGTGTTTCTTCTACTTTGTGTTTCTTCTACTTTGTGTTTCTTCTACTTTGTGTTTCTTCTACTTTGTGTTTCTTCTACTTCGTGTTTCTTCTACTTTGTGTTTCTTCTACTTCGTGTTTCTTCTACTTTGTGTTTCACAACTCTAAACTTAAGCTTATGTACTCTATATTTCAATTTCTAAACTAATTAGTTTCATGAGATTCAAGATTTGAAAGATTAAGCTGCAAAGCACAAGGGCAAGAATCATTAAATTGATATATAAAATGCTTAATTTGCTTTGCAGGTATCACCCAGATCCGCTAACAGTGGTCACCGCTGGGCCAAGCATGAATAATTTCCTCCCAGGGTGGTTGCCTTGAGAAACAAAAAGATGGGAGTTCTTCCATTCAAAAAATTATTTAAAAAAAAGGGGAAAAAAAAAACATTTTTCAATGCTTGAAACTTATATATCTAATTAATATAAACTCTGCACTTTAGTCTTTGTAAGCCAATTGTGTGTATGTTATGCCACATTCCTTTCTCTTACACCTCAAGACTCTGCTTTTCGAATGTAATTTCATTGTTTTCTTGTTTGTCATAAAGTTGTAAGTTTGTGTGTATTTTGATTCTCACATGCTAAAATCTTTCCAACTCTAATTCTAATTCT

mRNA sequence

TGAGGGAATGAGGTGTAACCCTAGATGAGAGGGGATGAGAGGAGATGAGAGGAGATGAGATGAGAGCATAAAAGAAGGAAAAGAAAAGAAAGAAAGAAAAAAAAGGATGGGGGGGTTTTGTGTTGTTAGTTTAGTTTGTGGGAGAGAGAGAGAGAGAGGAGGTCGGAGAAAGCTGTGAAGAATATAAATAGAAAGGCACATAGGATAGGTTAAGCAAGTAAAGAGGAAAGAAGGAGAGGAAAAACAAAGATGGGAAGAGGGAGAGTAGAGCTGAAGAGAATAGAAAACAAGATCAATAGGCAAGTCACCTTCGCTAAACGGAGAAATGGGGTTTTGAAGAAAGCTTATGAGCTCTCCGTTCTGTGCGATGCCGAAGTTGCTCTCATCATCTTCTCCAATAGAGGAAAGCTCTACGAGTTTTGCAGTAGTTCAAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCCCTTGAAAGGCAACTTGATATGTCACTCAAGCACATAAGGTCAACAAGGACTCAGTACATGTTAGATCAACTCACCGATCTTCAACGTAAGGAGCATCTTCTTAACGACGCAAACAGGACTCTGAAACAAAGGTTAGTAGAAGGGTATCAAGTAAATGCTCTCCAATTGAACCAAAGTGGTGATGATATGATGTATGGAAGACACCAAGCTCACCCTCCACCCGATGCCTTCTTCCATCTTTTAGATGCCGAACCCACCTTACAAATTGGGTATCACCCAGATCCGCTAACAGTGGTCACCGCTGGGCCAAGCATGAATAATTTCCTCCCAGGGTGGTTGCCTTGAGAAACAAAAAGATGGGAGTTCTTCCATTCAAAAAATTATTTAAAAAAAAGGGGAAAAAAAAAACATTTTTCAATGCTTGAAACTTATATATCTAATTAATATAAACTCTGCACTTTAGTCTTTGTAAGCCAATTGTGTGTATGTTATGCCACATTCCTTTCTCTTACACCTCAAGACTCTGCTTTTCGAATGTAATTTCATTGTTTTCTTGTTTGTCATAAAGTTGTAAGTTTGTGTGTATTTTGATTCTCACATGCTAAAATCTTTCCAACTCTAATTCTAATTCT

Coding sequence (CDS)

ATGGGAAGAGGGAGAGTAGAGCTGAAGAGAATAGAAAACAAGATCAATAGGCAAGTCACCTTCGCTAAACGGAGAAATGGGGTTTTGAAGAAAGCTTATGAGCTCTCCGTTCTGTGCGATGCCGAAGTTGCTCTCATCATCTTCTCCAATAGAGGAAAGCTCTACGAGTTTTGCAGTAGTTCAAGGAACCTTTTGGGAGAAGACCTTGGCCCATTGAGTAGCAAAGAACTTGAATCCCTTGAAAGGCAACTTGATATGTCACTCAAGCACATAAGGTCAACAAGGACTCAGTACATGTTAGATCAACTCACCGATCTTCAACGTAAGGAGCATCTTCTTAACGACGCAAACAGGACTCTGAAACAAAGGTTAGTAGAAGGGTATCAAGTAAATGCTCTCCAATTGAACCAAAGTGGTGATGATATGATGTATGGAAGACACCAAGCTCACCCTCCACCCGATGCCTTCTTCCATCTTTTAGATGCCGAACCCACCTTACAAATTGGGTATCACCCAGATCCGCTAACAGTGGTCACCGCTGGGCCAAGCATGAATAATTTCCTCCCAGGGTGGTTGCCTTGA

Protein sequence

MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSRNLLGEDLGPLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVNALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGWLP

Homology

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BLAST of Cp4.1LG01g11860 vs. ExPASy Swiss-Prot
Match: Q8LLR0 (Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-80
Identity = 161/242 (66.53%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LS+KELESLERQLD+SLK IRSTRTQYMLDQLTDLQRKEH+LN+AN+TLKQRL+EG QVN
Sbjct: 121 LSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLLEGTQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 194
            LQ N +  D+ YGR QA P  D FFH L+ EPTLQIGY PDP+TV  AGPS+NN++PGW
Sbjct: 181 QLQWNPNAQDVGYGRQQAQPQGDGFFHPLECEPTLQIGYQPDPITVAAAGPSVNNYMPGW 240

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BLAST of Cp4.1LG01g11860 vs. ExPASy Swiss-Prot
Match: Q03489 (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE=1 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 1.9e-72
Identity = 154/242 (63.64%), Postives = 166/242 (68.60%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           L+SKELESLERQLDMSLK IRSTRTQ MLDQL DLQRKEH LN+ANRTLKQRL+EG  +N
Sbjct: 121 LNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 194
            LQ  Q+  D+ YGR       D FFH L+ EPTLQIGY  DP+TV  AGPS+NN++ GW
Sbjct: 181 -LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQNDPITVGGAGPSVNNYMAGW 240

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BLAST of Cp4.1LG01g11860 vs. ExPASy Swiss-Prot
Match: O65874 (MADS-box transcription factor 1 OS=Pisum sativum OX=3888 GN=MTF1 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.5e-71
Identity = 153/248 (61.69%), Postives = 173/248 (69.76%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKR+ENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALI+FSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRVENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  S---------------------------------------------------RNLLGEDL 120
           S                                                   RNL+GEDL
Sbjct: 61  SSMLKTLERYQKCNYGAPEGNVTSKEALVLELSSQQEYLKLKARYESLQRSQRNLMGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQ 180
           GPLSSK+LE+LERQLD SLK IRSTRTQ+MLDQL DLQRKEHLL +ANR L+QR+ EGYQ
Sbjct: 121 GPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM-EGYQ 180

Query: 181 VNALQLNQSGDDMMYGR-HQAHPPPDAFFHL--LDAEPTLQIGYHP-DPLTVVTAGPSMN 194
           +N+LQLN S +DM YGR HQ H   D  F +  ++ EPTLQIGYH  DP +VVTAGPSMN
Sbjct: 181 INSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMN 240

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BLAST of Cp4.1LG01g11860 vs. ExPASy Swiss-Prot
Match: O04067 (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba OX=3728 GN=AGL9 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.1e-60
Identity = 140/249 (56.22%), Postives = 158/249 (63.45%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S---------------------------------------------------RNLLGEDL 120
           S                                                   RNLLGEDL
Sbjct: 61  SSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQ 180
           GPLS+KELE LERQLD SLK IR+ RTQ+MLDQL DLQ KE +LN+ N+TL+ RL +GYQ
Sbjct: 121 GPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSGDD--MMYGRH---QAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSM 194
           +  LQLN + +D  + YGRH   Q      AFF  L+ EP LQ+GY       + AGPS 
Sbjct: 181 M-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHGMEAGPSE 240

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BLAST of Cp4.1LG01g11860 vs. ExPASy Swiss-Prot
Match: O22456 (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana OX=3702 GN=SEP3 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.8e-60
Identity = 140/247 (56.68%), Postives = 159/247 (64.37%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S---------------------------------------------------RNLLGEDL 120
           S                                                   RNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQ 180
           GPLS+KELESLERQLD SLK IR+ RTQ+MLDQL DLQ KE +L + N+TL+ RL +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSGDDM-MYGR--HQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNN 194
           +  LQLN + +++  YGR  HQ      AFF  L+ EP LQIGY       + AGPS+NN
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNN 240

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BLAST of Cp4.1LG01g11860 vs. NCBI nr
Match: XP_022954378.1 (agamous-like MADS-box protein AGL9 homolog [Cucurbita moschata] >XP_022991357.1 agamous-like MADS-box protein AGL9 homolog [Cucurbita maxima])

HSP 1 Score: 361 bits (926), Expect = 1.53e-124
Identity = 193/242 (79.75%), Postives = 193/242 (79.75%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALEVSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. NCBI nr
Match: XP_023534800.1 (agamous-like MADS-box protein AGL9 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361 bits (926), Expect = 1.53e-124
Identity = 193/242 (79.75%), Postives = 193/242 (79.75%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEANVSTREALEVSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. NCBI nr
Match: KAG6576134.1 (Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360 bits (925), Expect = 2.17e-124
Identity = 192/242 (79.34%), Postives = 193/242 (79.75%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALEVSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQ+N
Sbjct: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQIN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. NCBI nr
Match: XP_022155454.1 (agamous-like MADS-box protein AGL9 homolog [Momordica charantia])

HSP 1 Score: 334 bits (857), Expect = 4.95e-114
Identity = 181/242 (74.79%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYFKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLK IRSTRTQYMLDQLTDLQRKEHLLN+AN+TLKQRLVEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQS DDMMYGR QA PP DAFFH LD EPTLQIGY PDP+TVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPTDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. NCBI nr
Match: XP_022959859.1 (agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita moschata] >XP_023004224.1 agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita maxima] >XP_023514991.1 agamous-like MADS-box protein AGL9 homolog isoform X1 [Cucurbita pepo subsp. pepo] >KAG6592960.1 Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334 bits (856), Expect = 7.02e-114
Identity = 180/242 (74.38%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLK IRSTRTQYMLDQLTDLQRKEHLLN+AN+TLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQS DDMMYGR QA PP DAFFH LD EPTLQIGY PDP+TVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. ExPASy TrEMBL
Match: A0A6J1JLL0 (agamous-like MADS-box protein AGL9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488019 PE=4 SV=1)

HSP 1 Score: 361 bits (926), Expect = 7.40e-125
Identity = 193/242 (79.75%), Postives = 193/242 (79.75%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALEVSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. ExPASy TrEMBL
Match: A0A6J1GQY2 (agamous-like MADS-box protein AGL9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456633 PE=4 SV=1)

HSP 1 Score: 361 bits (926), Expect = 7.40e-125
Identity = 193/242 (79.75%), Postives = 193/242 (79.75%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALEVSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. ExPASy TrEMBL
Match: A0A6J1DQB6 (agamous-like MADS-box protein AGL9 homolog OS=Momordica charantia OX=3673 GN=LOC111022593 PE=4 SV=1)

HSP 1 Score: 334 bits (857), Expect = 2.39e-114
Identity = 181/242 (74.79%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYFKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLK IRSTRTQYMLDQLTDLQRKEHLLN+AN+TLKQRLVEGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLVEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQS DDMMYGR QA PP DAFFH LD EPTLQIGY PDP+TVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPTDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. ExPASy TrEMBL
Match: A0A6J1KVP3 (agamous-like MADS-box protein AGL9 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497619 PE=4 SV=1)

HSP 1 Score: 334 bits (856), Expect = 3.40e-114
Identity = 180/242 (74.38%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLK IRSTRTQYMLDQLTDLQRKEHLLN+AN+TLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQS DDMMYGR QA PP DAFFH LD EPTLQIGY PDP+TVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. ExPASy TrEMBL
Match: A0A6J1H9B2 (agamous-like MADS-box protein AGL9 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460797 PE=4 SV=1)

HSP 1 Score: 334 bits (856), Expect = 3.40e-114
Identity = 180/242 (74.38%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S-------------------------------------------------RNLLGEDLGP 120
           S                                                 RNLLGEDLGP
Sbjct: 61  SSMLKTLERYQKCNYGAPEPNVSTREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGP 120

Query: 121 LSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVN 180
           LSSKELESLERQLDMSLK IRSTRTQYMLDQLTDLQRKEHLLN+AN+TLKQRL+EGYQVN
Sbjct: 121 LSSKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLIEGYQVN 180

Query: 181 ALQLNQSGDDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNFLPGW 193
           ALQLNQS DDMMYGR QA PP DAFFH LD EPTLQIGY PDP+TVVTAGPSMNNFLPGW
Sbjct: 181 ALQLNQSADDMMYGRQQAQPPSDAFFHPLDCEPTLQIGYQPDPITVVTAGPSMNNFLPGW 240

[Close]

BLAST of Cp4.1LG01g11860 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 140/246 (56.91%), Postives = 159/246 (64.63%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S--------------------------------------------------RNLLGEDLG 120
           S                                                  RNLLGEDLG
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRNLLGEDLG 120

Query: 121 PLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQV 180
           PLS+KELESLERQLD SLK IR+ RTQ+MLDQL DLQ KE +L + N+TL+ RL +GYQ+
Sbjct: 121 PLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQM 180

Query: 181 NALQLNQSGDDM-MYGR--HQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNNF 194
             LQLN + +++  YGR  HQ      AFF  L+ EP LQIGY       + AGPS+NN+
Sbjct: 181 -PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNNY 240

[Close]

BLAST of Cp4.1LG01g11860 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.0e-61
Identity = 140/247 (56.68%), Postives = 159/247 (64.37%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S---------------------------------------------------RNLLGEDL 120
           S                                                   RNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQ 180
           GPLS+KELESLERQLD SLK IR+ RTQ+MLDQL DLQ KE +L + N+TL+ RL +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180

Query: 181 VNALQLNQSGDDM-MYGR--HQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNN 194
           +  LQLN + +++  YGR  HQ      AFF  L+ EP LQIGY       + AGPS+NN
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNN 240

[Close]

BLAST of Cp4.1LG01g11860 vs. TAIR 10
Match: AT1G24260.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 134/247 (54.25%), Postives = 149/247 (60.32%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S---------------------------------------------------RNLLGEDL 120
           S                                                   RNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLSSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQ 180
           GPLS+KELESLERQLD SLK IR+ RTQ+MLDQL DLQ K              L +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSK--------------LADGYQ 180

Query: 181 VNALQLNQSGDDM-MYGR--HQAHPPPDAFFHLLDAEPTLQIGYHPDPLTVVTAGPSMNN 194
           +  LQLN + +++  YGR  HQ      AFF  L+ EP LQIGY       + AGPS+NN
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSVNN 231

[Close]

BLAST of Cp4.1LG01g11860 vs. TAIR 10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-54
Identity = 129/251 (51.39%), Postives = 152/251 (60.56%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEV+LI+FSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  S------------------------------------------------RNLLGEDLGPL 120
           S                                                RNLLGEDLGPL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 SSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVNA 180
           +SKELE LERQLD SLK +R  +TQYMLDQL+DLQ KEH+L DANR L  +L +   V  
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180

Query: 181 LQLN---QSGD--DMMYGRHQAHPPPDAFFHLLDAEPTLQIGY-HP---DPLTVVTAGPS 193
             +    + GD  ++ YG  QAH      +  L+ +PTLQIGY HP   + + V   G S
Sbjct: 181 HHIGGGWEGGDQQNIAYGHPQAH--SQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQS 240

[Close]

BLAST of Cp4.1LG01g11860 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.7e-52
Identity = 124/252 (49.21%), Postives = 146/252 (57.94%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGVLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
           MGRGRVELKRIENKINRQVTFAKRRNG+LKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  S------------------------------------------------RNLLGEDLGPL 120
           S                                                RNLLGEDLGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 SSKELESLERQLDMSLKHIRSTRTQYMLDQLTDLQRKEHLLNDANRTLKQRLVEGYQVNA 180
           +SKELE LERQLD SLK +RS +TQYMLDQL+DLQ KE +L + NR L  +L +   V +
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180

Query: 181 LQLNQSG------DDMMYGRHQAHPPPDAFFHLLDAEPTLQIGYH----PDPLTVVTAGP 193
             +   G       ++ Y  HQA       +  L+  PTLQ+GY      + +T  T   
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQ--SQGLYQPLECNPTLQMGYDNPVCSEQITATTQAQ 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g11860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LLR0	1.1e-80	66.53	Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=...	[more]
Q03489	1.9e-72	63.64	Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida OX=4102 GN=FBP2 PE...	[more]
O65874	3.5e-71	61.69	MADS-box transcription factor 1 OS=Pisum sativum OX=3888 GN=MTF1 PE=2 SV=1	[more]
O04067	2.1e-60	56.22	Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba OX=3728 GN=AGL9 PE=2 ...	[more]
O22456	2.8e-60	56.68	Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana OX=3702 GN=SEP3 PE=1 S...	[more]

BLAST of Cp4.1LG01g11860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954378.1	1.53e-124	79.75	agamous-like MADS-box protein AGL9 homolog [Cucurbita moschata] >XP_022991357.1 ...	[more]
XP_023534800.1	1.53e-124	79.75	agamous-like MADS-box protein AGL9 homolog [Cucurbita pepo subsp. pepo]	[more]
KAG6576134.1	2.17e-124	79.34	Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022155454.1	4.95e-114	74.79	agamous-like MADS-box protein AGL9 homolog [Momordica charantia]	[more]
XP_022959859.1	7.02e-114	74.38	agamous-like MADS-box protein AGL9 homolog isoform X2 [Cucurbita moschata] >XP_0...	[more]

BLAST of Cp4.1LG01g11860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLL0	7.40e-125	79.75	agamous-like MADS-box protein AGL9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GQY2	7.40e-125	79.75	agamous-like MADS-box protein AGL9 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1DQB6	2.39e-114	74.79	agamous-like MADS-box protein AGL9 homolog OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1KVP3	3.40e-114	74.38	agamous-like MADS-box protein AGL9 homolog isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1H9B2	3.40e-114	74.38	agamous-like MADS-box protein AGL9 homolog isoform X2 OS=Cucurbita moschata OX=3...	[more]

BLAST of Cp4.1LG01g11860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24260.1	1.5e-61	56.91	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	2.0e-61	56.68	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.3	1.1e-54	54.25	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	1.8e-54	51.39	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.1	3.7e-52	49.21	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 67.51 coord: 3..23 score: 68.71 coord: 23..38 score: 81.05
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 7.4E-41 score: 151.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.9E-25 score: 88.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 33.262905
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..78 e-value: 8.4E-26 score: 91.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..63
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 59..124 e-value: 7.6E-21 score: 74.1
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 40..136 score: 10.629169
None	No IPR available	PANTHER	PTHR48019:SF29	AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG	coord: 60..179
None	No IPR available	PANTHER	PTHR48019:SF29	AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG	coord: 1..62
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 60..179
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..62
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..61 e-value: 1.21069E-42 score: 135.758

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g11860.1	Cp4.1LG01g11860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding