Cp4.1LG01g11690 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g11690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ribosome biogenesis protein NOP53
Location	Cp4.1LG01: 5933422 .. 5937710 (+)
RNA-Seq Expression	Cp4.1LG01g11690
Synteny	Cp4.1LG01g11690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAAATCAAAGGGATCTAGGAAGGGGAAGAAGGCGTGGAGAGCTAACATAAGTACTGCAGAAATTGAGGATTTCTTCGAGAAGTCTACGAAGGATGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCGCTTTTGATTCCTGCTTCCCACTGAATTATAGTGTGCTCTCCTTTGTGTAAAGCAAACTTATTGTTTTTCATTGAGTTTGGAGTTTTAGTGTTGAACTGAAGAGTGAAAATACCGTCATTGGGTTTTGAGGACACTAACTAAAGTATCCACAAAATCCATCAAAGGTCTCTGAAACTTCTGTTTGACGCTGAACTGAATCAAATTTCGTCTGCAAAGCTTATAATTGAGAATTTTGATTAGTTTTTCCTATATTACGATAATTTTGATTGCTGAAATTAAGCAAAATATTCAGGCATATAAACAATTACATTATTTTAGAGATGTTCAATTCTTTCTCAATTTGCACTTGGGCTTTCGAAAGAAGGGTCTATTTCCTCTTAAGAGGAGATGAAAACGTGTTTGTTGTGGGCTCTTGCTGTATACCATAACTGACGATTGGATGGTATCTTCAATGAGGTTGAATGATAACATGGGAAGAGCCTAGAGTTTTGGTCTTGTGCTTTCCCTTCTGATGCATTTGTTTGCTTCGACTTAGGAACTGAGCCTACGTTCATCCCATATTTGTTCCTTAGGAGTATAAACTGATTTCCTTTAAAAGAACATTGTTAGAAAGGATTTGTCATTGGTTGCACTAATTATTATTATTTCTCTGTTTTTCTGTATAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAACGAGAAAAAGTCCTTTACTGTGACAGCATATTGACGAAGAACCCGTTTGTCCAAGCAGTGCCTTCTTCAGTAAATAAGAAATCCAAGAAAAAACAGGAGGAGGCTTCCACAGTCAAAGAAGCCTCTCAAGATGGTGCCAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTCCTTTTTTAACCCTCTCATCTCACTCTTGTACTTAACAACCATTTTTAATGACAAAAATAATAATAATAATAATAATAATCAAACATTGCACTACTTGTTTTTGGTGCACTGCAGGTGAGGTTAGAAGCAAAATCAGCAAGGTATGCTGTTTTACCTGGTTAATTAATAATGAGTCTTATATTTTATCGTACATTGTTTATGTCATAAGTTAGAGCTCATCGGTCTAAAATATAGCAATATCGATTCAAAAAGATATAAGGCTCTTTGTAGGGCTTTCTTTTGTGGACTTGGCTTTTTGTATGCCCTTGTATTCATTCATTTTTTCTCAATGAAAGTTGTTATTATATATTTAAAAGAAAAAGATACAAGGCTCTTGTCCTAATGCAAACAATGGAAGAAGAAAATATGAGGGTGGAAAAAGAAGAGTTATCAAAAAGAAGGGGAAAAAATATGATTATGTTGCAGGAATGTAACAATGTAATTTTTATTGCAATCTTGGTCAGAAACCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCAGGATGTTCGTTCAATCCATCGCATGAGAGTCATCAGGTAAGATGTAATAATTCCAAGCGATGAAGAAGTTAAACAATGTTGTTGAGTAATGTTTTGATAATAGATCGTTAAAAGTGCATTTTCCCCTTCAAACTCTCTATCATATCTGTTTTATCCCCTTAAATTTCCCATTTCATGATTCAGGATGTACTTGCACAAGCTGTTGCAGAAGAAATGCAGAAAGTATACCGTAATGAGCTGGGGCCTGCGCCAGTTCCTTTAACAGTCCCAGGAGAACCTATTAGTGAAGAAGATGTGAGTATATTGACCCATAATCTTGTACTCTATCGGAATGCTTTTTCCTTTTTTAGTTGCTTTTCTTGATTTAAGAGATTATCTTCAATTCCTGTTTTGCAGATGTTGTTTTTGGATGCTGATAATAACACTGATGATGAAACCAATTTGGATGAAATGGATCAGGACGAAAATAATGAATTAGAAAAAAGGTTTCATTTATGGGAGTTAAATTATTTTAAGGATTGCAGATTTTTTCAAGTAGTTTGGATCAATTTTTTGGCTTTCTTATGCATGGTTCACGCTATATTTGAGCGTATACTATTGATTTACTGTGTGGATCTATTTGAACTTAAAGGCTTATGTTCTTCATTGGGATTGGGATTGGGATTGAACAGATCTTGCCTACATATGCATTCCAATCGTATGCCCTCAAAGGCTTATCTCTCTAACTTGCGTTATTTTATGAAGTGATTAAAATGTTTCAAGAATTCTGTTCACTGACATTCTAGTATTTTAAGGAATAGCAAGGTTACTGGGGACGTTGGGATTGGGTAGACTAGAGATCAATGTGAGCCTTGGCAATTTTCTTTCCACAGCAACCCTATTCTTTAGCTAGCCACTAGTTTGAGAGTTTTCCTTTCTATTCTTTCTATGTTTTTCTGTTGTCAATAATAATTGCTCTTAAACTGAATATCTTAAGAAAGAGAACTTCAAGTTGGCATTGTCTAAATAAATTAAGCTTGTTACACAGGCCTTTGAAGATGAGAAGGGTGACTCGAGTGGAATTCAATAAGAGAGCTAGACATAAAGAACAGGCCAAAAAGGAAGCCGAAGCAAAGAAGTTGAAGGGGATTTCTAAAGACATTGACAGGTAAATTAGTATCTTTGTTCCTCCATAGTTATGGAACGTTTTATGTAACTGAGCTTTTGCTCTTGTGGGTGTAGCTTGCCGGATATCATTCAAGAAATAGCCAAGGAGGACGAGGAGAGAGATAAGAGACGCATGCGACGAACTATAGCCAAACAGGAGAGATTAAAGTCATGCCCACCTCGCTTGGGGAAGCACAAGTATGTAGTACTATAGTTATATAGCTCGTATTTCCCAATCCATAAATAGTTCTTTCTAGTATATCTCAATTGAAAGATTTAGGGCTCGTATGATAACGTCTTCTGTTTTTTGTTTCTCGTTTTCCACTTCATGTTTCTTGTTTCCTCTTAAACTGTTCTTGTCTCTTGTTCTTTCTTTTCTTTATTGAAGAAAAAGAACATAAAAATGTTTAATAACCATTTCTTGTTTTTTGTTTTCGAAATTTCTACTAATGTTTATGTAAATTGAGTAACAAGAAACAGGAACAATTAGCAAACATATGGTTCTAAAAATATGAAACCCGAAACAAGAATGTAATCAAATGAGCCTCTGAAATACACTGATTCATGCTGAAACAAGATAACATCAAGAAAGTTTGTGTCCTGAACTGCATGGTGTTACTTTCAGGTTTGAGCCCGCGCCAGTTCAAGTTCTCCTATCCGAGGAAATAACTGGATCACTCCGGAAGCTGAAGGTGCATTCATTTAATTTCCATGTCCATCTTTCCTGAATACTCCTCTCAATCTAAATTATTGTTTCTGAAATTTAGATGTGAAACTGAAAGAACATCGTGGTTGGTTATGTTGTATAAATATAGGGCTGTTGCACCCTTGTGAAGGACAGGTTTAAGAGCTTAGAGAAACGAGGAATAATCGCCCCTACTGCCAAGAGCAGAAGGTTAGTAACTTAGTCATTGGTTCTTTTCACAAACTGCTCCTTTTATGAAGGCATCAACCATGGCTTTCTTTCTTACAAACTTACGCTTCTTTTTGCCGATTCGTTCGACAGGAAATAGAATCAGATTTGTTCTATCTTCGAACTCGAGAGACGTCTATGGTGATAGTATATGTGGCCATGGAAGGGCTTTGAGATGTAGCTTGTTGTAGTAAAGCAGCTTGTTGTTTCTATTTCCTTTTATATATAATATATAGTTTTAGTCCTTAGAAGGATTTGGTTTACACTTCGGCTAAGTACTATAGACAGGTCTAATTTTCTCTTCACGAGTCATTTCCATCTTAAATTGTTATTTCATTTGAGAAGAATGCTTTTCTGGCCTTTTCCTTCGAAAAAGCTTGATTGGAAAAAAGTTTTTAGTTTTAATTTTTTTTTTTTTTTTTTCTTTTTCATTTTCTAAGTTTTAGATATATTTTTAATGTTAAACAAATACGTGTAGAGATTTGATTATCCTGTTATTTTAAATGTTTTA

mRNA sequence

ATGGGGAAGAAATCAAAGGGATCTAGGAAGGGGAAGAAGGCGTGGAGAGCTAACATAAGTACTGCAGAAATTGAGGATTTCTTCGAGAAAAAGGATTTGTCATTGGTTGCACTAATTATTATTATTTCTCTGTTTTTCTGTATAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAACGAGAAAAAGTCCTTTACTGTGACAGCATATTGACGAAGAACCCGTTTGTCCAAGCAGTGCCTTCTTCAGTAAATAAGAAATCCAAGAAAAAACAGGAGGAGGCTTCCACAGTCAAAGAAGCCTCTCAAGATGGTGCCAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTGAGGTTAGAAGCAAAATCAGCAAGAAACCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCAGGATGTTCGTTCAATCCATCGCATGAGAGTCATCAGGATGTACTTGCACAAGCTGTTGCAGAAGAAATGCAGAAAGTATACCGTAATGAGCTGGGGCCTGCGCCAGTTCCTTTAACAGTCCCAGGAGAACCTATTAGTGAAGAAGATATGTTGTTTTTGGATGCTGATAATAACACTGATGATGAAACCAATTTGGATGAAATGGATCAGGACGAAAATAATGAATTAGAAAAAAGGCTTATGTTCTTCATTGGGATTGGGATTGGGATTGAACAGATCTTGCCTACATATGCATTCCAATCGCCTTTGAAGATGAGAAGGGTGACTCGAGTGGAATTCAATAAGAGAGCTAGACATAAAGAACAGGCCAAAAAGGAAGCCGAAGCAAAGAAGTTGAAGGGGATTTCTAAAGACATTGACAGCTTGCCGGATATCATTCAAGAAATAGCCAAGGAGGACGAGGAGAGAGATAAGAGACGCATGCGACGAACTATAGCCAAACAGGAGAGATTAAAGTCATGCCCACCTCGCTTGGGGAAGCACAAGTTTGAGCCCGCGCCAGTTCAAGTTCTCCTATCCGAGGAAATAACTGGATCACTCCGGAAGCTGAAGGGCTGTTGCACCCTTGTGAAGGACAGGTTTAAGAGCTTAGAGAAACGAGGAATAATCGCCCCTACTGCCAAGAGCAGAAGGAAATAGAATCAGATTTGTTCTATCTTCGAACTCGAGAGACGTCTATGGTGATAGTATATGTGGCCATGGAAGGGCTTTGAGATGTAGCTTGTTGTAGTAAAGCAGCTTGTTGTTTCTATTTCCTTTTATATATAATATATAGTTTTAGTCCTTAGAAGGATTTGGTTTACACTTCGGCTAAGTACTATAGACAGGTCTAATTTTCTCTTCACGAGTCATTTCCATCTTAAATTGTTATTTCATTTGAGAAGAATGCTTTTCTGGCCTTTTCCTTCGAAAAAGCTTGATTGGAAAAAAGTTTTTAGTTTTAATTTTTTTTTTTTTTTTTTCTTTTTCATTTTCTAAGTTTTAGATATATTTTTAATGTTAAACAAATACGTGTAGAGATTTGATTATCCTGTTATTTTAAATGTTTTA

Coding sequence (CDS)

ATGGGGAAGAAATCAAAGGGATCTAGGAAGGGGAAGAAGGCGTGGAGAGCTAACATAAGTACTGCAGAAATTGAGGATTTCTTCGAGAAAAAGGATTTGTCATTGGTTGCACTAATTATTATTATTTCTCTGTTTTTCTGTATAGATCTTTCAGTGAAGCGGAAAATAGAAAAGAAACGAGAAAAAGTCCTTTACTGTGACAGCATATTGACGAAGAACCCGTTTGTCCAAGCAGTGCCTTCTTCAGTAAATAAGAAATCCAAGAAAAAACAGGAGGAGGCTTCCACAGTCAAAGAAGCCTCTCAAGATGGTGCCAAGGTTGGCATGCTTGATCTGTGGGATGATAAAGGTGAGGTTAGAAGCAAAATCAGCAAGAAACCAAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCCCAGGATGTTCGTTCAATCCATCGCATGAGAGTCATCAGGATGTACTTGCACAAGCTGTTGCAGAAGAAATGCAGAAAGTATACCGTAATGAGCTGGGGCCTGCGCCAGTTCCTTTAACAGTCCCAGGAGAACCTATTAGTGAAGAAGATATGTTGTTTTTGGATGCTGATAATAACACTGATGATGAAACCAATTTGGATGAAATGGATCAGGACGAAAATAATGAATTAGAAAAAAGGCTTATGTTCTTCATTGGGATTGGGATTGGGATTGAACAGATCTTGCCTACATATGCATTCCAATCGCCTTTGAAGATGAGAAGGGTGACTCGAGTGGAATTCAATAAGAGAGCTAGACATAAAGAACAGGCCAAAAAGGAAGCCGAAGCAAAGAAGTTGAAGGGGATTTCTAAAGACATTGACAGCTTGCCGGATATCATTCAAGAAATAGCCAAGGAGGACGAGGAGAGAGATAAGAGACGCATGCGACGAACTATAGCCAAACAGGAGAGATTAAAGTCATGCCCACCTCGCTTGGGGAAGCACAAGTTTGAGCCCGCGCCAGTTCAAGTTCTCCTATCCGAGGAAATAACTGGATCACTCCGGAAGCTGAAGGGCTGTTGCACCCTTGTGAAGGACAGGTTTAAGAGCTTAGAGAAACGAGGAATAATCGCCCCTACTGCCAAGAGCAGAAGGAAATAG

Protein sequence

MGKKSKGSRKGKKAWRANISTAEIEDFFEKKDLSLVALIIIISLFFCIDLSVKRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDLWDDKGEVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKSRRK

Homology

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy Swiss-Prot
Match: O22892 (Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana OX=3702 GN=At2g40430 PE=1 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 1.4e-84
Identity = 210/441 (47.62%), Postives = 265/441 (60.09%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKK--------DLSLVALIIIISLFFCIDLSV 60
           MGK+SK SRKGKKAWRANIS+ +IEDFFEK         +LS      +  +    DL V
Sbjct: 1   MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVG---- 120
           KRKIEK RE+VL  DSIL KNPFVQ VPSS  K  K K+      K   Q    VG    
Sbjct: 61  KRKIEKHRERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSV 120

Query: 121 MLDLW--DDKGEVRSKISKKPK-PSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQK 180
           M DLW  D KGE  S   K  K PSII AVE+E PGCS+NP+ ESHQD+LA+AVA+EMQK
Sbjct: 121 MADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQK 180

Query: 181 VYRNELGPAPVPLTVPGEPISEEDMLFLDADNNTDDE----------------------- 240
           VY+ ELGPAPVPLT+ G+ +SE++  FLD DN ++ E                       
Sbjct: 181 VYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQ 240

Query: 241 ------TNLDEMDQDE------------------NNELEKRLMFFIGIG-IG-------I 300
                 TNL +++                      +++++ L +F+ +G +G       +
Sbjct: 241 LKPSSNTNLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDV 300

Query: 301 EQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIA 360
           +  +         K +RVTRVE NKR R K   KKE + K  + I  +IDSLP+I++EIA
Sbjct: 301 KIEVSEAGNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIA 360

Query: 361 KEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 372
           KEDE++  + +RR IAKQE LK  PPRLGK+KFE  PVQVLL+EE+TGSLRKLK CCTL 
Sbjct: 361 KEDEDKQNKHLRRVIAKQEVLKIRPPRLGKYKFEAPPVQVLLTEEMTGSLRKLKACCTLA 420

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy Swiss-Prot
Match: Q8BK35 (Ribosome biogenesis protein NOP53 OS=Mus musculus OX=10090 GN=Nop53 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-13
Identity = 68/245 (27.76%), Postives = 119/245 (48.57%), Query Frame = 0


Query: 128 KPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVPLTVPGEPISE 187
           KPS +PAVEV P G S+NP+ E HQ +L +A   E+Q+    E     + L    +  ++
Sbjct: 231 KPSQVPAVEVIPAGASYNPTFEDHQALLREAHEVELQREKEAEKLERQLALPTSEQAATQ 290

Query: 188 EDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQILPTYAFQSPLKMRR 247
           E +     +   ++    DE +     + E         G G  +I PT A     +M +
Sbjct: 291 ESVFREMCEGLLEESDGEDEHEAGRAGQPE--------AGDGTTEISPTGAAGPEKRMEK 350

Query: 248 VTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAK 307
            T  +  +    ++   ++A  +  +   +++  L  I  ++A+   E  +RR +R I +
Sbjct: 351 KTEQQRRREKAARKLRVQQAALRAARLQHQELFRLRGIKAQVARRLAELARRREQRRIRR 410

Query: 308 QERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTA 367
                  P RLG+ K++   + V LS E++GSLR LK    +++DRFKS +KR +I P  
Sbjct: 411 LAEADK-PRRLGRLKYQAPDIDVQLSSELSGSLRTLKPEGHILRDRFKSFQKRNMIEPRE 466

Query: 368 KSRRK 373
           +++ K
Sbjct: 471 RAKFK 466

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy Swiss-Prot
Match: Q9W3C2 (Ribosome biogenesis protein NOP53 OS=Drosophila melanogaster OX=7227 GN=CG1785 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.1e-11
Identity = 86/323 (26.63%), Postives = 152/323 (47.06%), Query Frame = 0


Query: 53  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDL 112
           +R  +KK +K+     I  +  F   +P   ++K    +E A  +  A   G KV     
Sbjct: 141 QRLADKKNKKLDVEKDIWQEVDFRDEIPGLKDEKGWISRELA--LHTAGNIGKKV----- 200

Query: 113 WDDKGEVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 172
                 V++  S   K +     E+  PG S+NP+ E HQ ++ Q V  E + + + E  
Sbjct: 201 ------VKTHASLHHKTTKAKKFELPHPGMSYNPAPEDHQALIDQVVERE-EGIIKKEQH 260

Query: 173 PAPVPLTVPGEPISEE-DMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIE 232
              V  ++  +   EE D   L+  +   DE    E+D+D     +K+           +
Sbjct: 261 LKRVTTSMFSKVTPEERDRRRLNEMSQGMDEEEGSELDEDVQTNGKKK---------EDD 320

Query: 233 QILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAK 292
              P +   +P++ ++ ++       + KE A++    +KLK  + D+  +  I  E+  
Sbjct: 321 DEKPYHTINAPVENKKKSKQARRNELKQKELARQTELKRKLKQQTADLIRIKSIRHELDD 380

Query: 293 EDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVK 352
           E+E+ +  + RR   + E+ K  P RLG+HKFE   + V L E+I G+LR +K   +L+K
Sbjct: 381 EEEDLNDLKKRRK-QRAEKAKFEPKRLGRHKFEEPDLDVNLPEDIAGNLRNVKTESSLLK 438

Query: 353 DRFKSLEKRGIIAPTAK--SRRK 373
           DRF +L++  ++ PT K  SR+K
Sbjct: 441 DRFHTLQRNNML-PTTKLVSRKK 438

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy Swiss-Prot
Match: Q9NZM5 (Ribosome biogenesis protein NOP53 OS=Homo sapiens OX=9606 GN=NOP53 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 9.6e-09
Identity = 109/445 (24.49%), Postives = 174/445 (39.10%), Query Frame = 0


Query: 3   KKSKGSRKGKKAWRANIST---AEIEDFFEKKDL------SLVALIIIISLFFCIDLSVK 62
           ++ +G R  K+ WR         E++ F E   L       L++      LFF    S +
Sbjct: 36  RRRRGPRNKKRGWRRLAQEPLGLEVDQFLEDVRLQERTSGGLLSEAPNEKLFFVDTGSKE 95

Query: 63  RKIEKKREKV----------LYCDSIL--------TKNPFVQAVPSSVNKKSKKKQE--- 122
           + + KKR KV          L  D IL         K+     VP++  KK ++K++   
Sbjct: 96  KGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNA--KKLRRKEQLWE 155

Query: 123 ----------------------EASTVKEASQDGAKVGMLDLWDDKG------------- 182
                                  A+  K   QD  +    DLW                 
Sbjct: 156 KLAKQGELPREVRRAQARLLNPSATRAKPGPQDTVERPFYDLWASDNPLDRPLVGQDEFF 215

Query: 183 --EVRSKISKKP-----KPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNE 242
             + + K  K+P     KPS  PAVEV P G S+NPS E HQ +L+ A   E+Q+    E
Sbjct: 216 LEQTKKKGVKRPARLHTKPSQAPAVEVAPAGASYNPSFEDHQTLLSAAHEVELQRQKEAE 275

Query: 243 LGPAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGI 302
                + L    +  ++E       +   ++     E  Q E  E             G 
Sbjct: 276 KLERQLALPATEQAATQESTFQELCEGLLEESDGEGEPGQGEGPE------------AGD 335

Query: 303 EQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGI---SKDIDSLPDIIQ 362
            ++ PT     P ++    +    +R R K   +   +   L+      +++  L  I  
Sbjct: 336 AEVCPT-----PARLATTEKKTEQQRRREKAVHRLRVQQAALRAARLRHQELFRLRGIKA 395

Query: 363 EIAKEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCC 373
           ++A    E   RR RR  A++E     P RLG+ K++   + V LS E+T SLR LK   
Sbjct: 396 QVALRLAEL-ARRQRRRQARREAEADKPRRLGRLKYQAPDIDVQLSSELTDSLRTLKPEG 455

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy Swiss-Prot
Match: Q9UUI4 (Ribosome biogenesis protein NOP53 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp16 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-08
Identity = 101/414 (24.40%), Postives = 178/414 (43.00%), Query Frame = 0


Query: 6   KGSRKGKKAWRANISTAEIEDFFEK-KDLSLV----------ALIIIISLFFCIDLSVKR 65
           + SRK K+AWR NI   +IE   E+ +D  +           AL +I +L    D   KR
Sbjct: 14  QSSRKNKRAWRKNIDLEDIESGLEQTRDEEIKGGNVEHKPNDALFVIDTL--GDDRIAKR 73

Query: 66  KIEKKREKVLYCDSILTKNPFVQAVPSSV-------NKK----SKKKQEEASTVKEASQD 125
              +K+ K L  D IL     ++ V S +       NKK    S+K+      +   ++D
Sbjct: 74  --SRKKIKPLKVDQILENKSSIEKVHSHLTNNSTESNKKGKIFSRKELNRLQALVYKNKD 133

Query: 126 GAKV--------------GMLDLWDDKGEVR------SKISKKPKP-----SIIPAVEVE 185
           G                    D+W+    V       S +SK P+      + +P V + 
Sbjct: 134 GLTATSAASELKNTKQPKESYDVWETNPTVTIPVKRPSTLSKLPESLTENNAKVPNVVIA 193

Query: 186 PPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVPLTVPGEPISEEDMLFLDADNN 245
            PG S+NP   +   +L    +EE++K  +         ++   E    +   F D    
Sbjct: 194 DPGMSYNPDAAAWMKLLDTKGSEELKKEQKR--------ISELEEKERIQKKAFEDKGLV 253

Query: 246 TDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQILPTYAFQSPLKMRRVTRVEFNKRAR 305
           +D + N   +D D+ +E E+            E  +P+       K +R TR + NK  +
Sbjct: 254 SDQDVN-HSIDSDDQSEHEQ-----------AETPIPS------SKNKRKTRSQRNKIRQ 313

Query: 306 HKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAKQERLKSCPPRL 365
            +E+  +  E KK + + + ID  P I +++ ++D + +K   +   +    +K    + 
Sbjct: 314 RREEELRLLEQKKNEELLRTIDKAPAISKKLQQKD-KAEKFSNKAVSSSTTEIKLKKKKF 373

Query: 366 GKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKSRRK 373
           GKH+    P+++ L +E+T SLR+LK    L  DR+ SL++R ++ P+    +K
Sbjct: 374 GKHRLPNNPLEIKLGDELTSSLRELKPEGNLFADRYLSLQQRAMVPPSLPVLKK 396

[Close]

BLAST of Cp4.1LG01g11690 vs. NCBI nr
Match: XP_023547341.1 (ribosome biogenesis protein NOP53-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 634 bits (1635), Expect = 1.09e-227
Identity = 349/375 (93.07%), Postives = 349/375 (93.07%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKK---DLSLVALIIIISLFFCIDLSVKRKIE 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK    DLSLVALIIIISLFFCIDLSVKRKIE
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDDLSLVALIIIISLFFCIDLSVKRKIE 60

Query: 61  KKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDLWDDKG 120
           KKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDLWDDKG
Sbjct: 61  KKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDLWDDKG 120

Query: 121 EVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVP 180
           EVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVP
Sbjct: 121 EVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELGPAPVP 180

Query: 181 LTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQILPTY 240
           LTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKR                  
Sbjct: 181 LTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKR------------------ 240

Query: 241 AFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERD 300
               PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERD
Sbjct: 241 ----PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERD 300

Query: 301 KRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSL 360
           KRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSL
Sbjct: 301 KRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSL 353

Query: 361 EKRGIIAPTAKSRRK 372
           EKRGIIAPTAKSRRK
Sbjct: 361 EKRGIIAPTAKSRRK 353

[Close]

BLAST of Cp4.1LG01g11690 vs. NCBI nr
Match: KAG7031528.1 (hypothetical protein SDJN02_05568, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 591 bits (1524), Expect = 1.27e-210
Identity = 332/380 (87.37%), Postives = 337/380 (88.68%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KD------LSLVALIIIISLFFCIDLSV 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD      LS V    +  +    DLSV
Sbjct: 2   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 61

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDL 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKK EEASTVKEASQDGAKVG+LDL
Sbjct: 62  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDL 121

Query: 121 WDDKGEVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180
           WDDKGE RSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG
Sbjct: 122 WDDKGEARSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 181

Query: 181 PAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQ 240
           PAPVPLTVPGE ISEEDMLFLDADNN+DDETNLDEMDQDENNELEK L+           
Sbjct: 182 PAPVPLTVPGEAISEEDMLFLDADNNSDDETNLDEMDQDENNELEKSLL----------- 241

Query: 241 ILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300
                    PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE
Sbjct: 242 -------HRPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 301

Query: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 360
           DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD
Sbjct: 302 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 361

Query: 361 RFKSLEKRGIIAPTAKSRRK 372
           RFKSLEKRGIIAPTAKSRRK
Sbjct: 362 RFKSLEKRGIIAPTAKSRRK 363

[Close]

BLAST of Cp4.1LG01g11690 vs. NCBI nr
Match: XP_022942752.1 (ribosome biogenesis protein NOP53-like [Cucurbita moschata] >KAG6600893.1 Ribosome biogenesis protein NOP53, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 590 bits (1520), Expect = 4.29e-210
Identity = 332/380 (87.37%), Postives = 336/380 (88.42%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KD------LSLVALIIIISLFFCIDLSV 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD      LS V    +  +    DLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDL 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKK EEASTVKEASQDGAKVG+LDL
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDL 120

Query: 121 WDDKGEVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180
           WDDKGE RSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG
Sbjct: 121 WDDKGEARSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180

Query: 181 PAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQ 240
           PAPVPLTVPGE ISEEDMLFLDADNN+DDETNLDEMDQDENNELEKR             
Sbjct: 181 PAPVPLTVPGEAISEEDMLFLDADNNSDDETNLDEMDQDENNELEKR------------- 240

Query: 241 ILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300
                    PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE
Sbjct: 241 ---------PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300

Query: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 360
           DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD
Sbjct: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 358

Query: 361 RFKSLEKRGIIAPTAKSRRK 372
           RFKSLEKRGIIAPTAKSRRK
Sbjct: 361 RFKSLEKRGIIAPTAKSRRK 358

[Close]

BLAST of Cp4.1LG01g11690 vs. NCBI nr
Match: XP_022991921.1 (ribosome biogenesis protein NOP53-like [Cucurbita maxima])

HSP 1 Score: 588 bits (1517), Expect = 1.23e-209
Identity = 332/380 (87.37%), Postives = 335/380 (88.16%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KD------LSLVALIIIISLFFCIDLSV 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD      LS V    +  +    DLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDL 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKK EEASTVKEASQDGAKVG+LDL
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDL 120

Query: 121 WDDKGEVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180
           WDDK E RSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG
Sbjct: 121 WDDKDEARSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180

Query: 181 PAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQ 240
           PAPVPLTVPGE ISEEDMLFLDADNNTDDETNLDEMDQDENNELEKR             
Sbjct: 181 PAPVPLTVPGEAISEEDMLFLDADNNTDDETNLDEMDQDENNELEKR------------- 240

Query: 241 ILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300
                    PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE
Sbjct: 241 ---------PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300

Query: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 360
           DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD
Sbjct: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 358

Query: 361 RFKSLEKRGIIAPTAKSRRK 372
           RFKSLEKRGIIAPTAKSRRK
Sbjct: 361 RFKSLEKRGIIAPTAKSRRK 358

[Close]

BLAST of Cp4.1LG01g11690 vs. NCBI nr
Match: XP_038878460.1 (ribosome biogenesis protein NOP53 [Benincasa hispida])

HSP 1 Score: 547 bits (1409), Expect = 3.52e-193
Identity = 315/382 (82.46%), Postives = 330/382 (86.39%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KDL----SLVALIIIISLFFCI---DLS 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD     SL AL    SLF      DLS
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSD-SLFVVDKSRDLS 60

Query: 61  VKRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLD 120
           VKRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKK EEAS VKE SQDG+KVGMLD
Sbjct: 61  VKRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASLVKETSQDGSKVGMLD 120

Query: 121 LWDDKGEVRSK-ISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNE 180
           LWDD+GEVRSK I+KK KPSIIPAVEVE PGCSFNPSHESHQDVLAQAVA+EMQKVYRNE
Sbjct: 121 LWDDEGEVRSKKINKKSKPSIIPAVEVEHPGCSFNPSHESHQDVLAQAVAQEMQKVYRNE 180

Query: 181 LGPAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGI 240
           LGPAPVPLTVPGE I EEDMLFLD DNNTDDETNLDEMDQDE++ELEKR           
Sbjct: 181 LGPAPVPLTVPGEVIREEDMLFLDVDNNTDDETNLDEMDQDEDHELEKR----------- 240

Query: 241 EQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIA 300
                      PLKMRRVTRVE NKRARHKE+ +KEAEAKKL+GISK+IDSLPDIIQEIA
Sbjct: 241 -----------PLKMRRVTRVELNKRARHKEKVRKEAEAKKLEGISKEIDSLPDIIQEIA 300

Query: 301 KEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 360
           KEDEER+ RR+RRTIAKQERL+SCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV
Sbjct: 301 KEDEERENRRIRRTIAKQERLRSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 359

Query: 361 KDRFKSLEKRGIIAPTAKSRRK 372
           +DR+KSLEKRGIIAPTAKSRRK
Sbjct: 361 RDRYKSLEKRGIIAPTAKSRRK 359

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy TrEMBL
Match: A0A6J1FR54 (Ribosome biogenesis protein NOP53 OS=Cucurbita moschata OX=3662 GN=LOC111447694 PE=3 SV=1)

HSP 1 Score: 590 bits (1520), Expect = 2.08e-210
Identity = 332/380 (87.37%), Postives = 336/380 (88.42%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KD------LSLVALIIIISLFFCIDLSV 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD      LS V    +  +    DLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDL 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKK EEASTVKEASQDGAKVG+LDL
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDL 120

Query: 121 WDDKGEVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180
           WDDKGE RSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG
Sbjct: 121 WDDKGEARSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180

Query: 181 PAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQ 240
           PAPVPLTVPGE ISEEDMLFLDADNN+DDETNLDEMDQDENNELEKR             
Sbjct: 181 PAPVPLTVPGEAISEEDMLFLDADNNSDDETNLDEMDQDENNELEKR------------- 240

Query: 241 ILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300
                    PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE
Sbjct: 241 ---------PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300

Query: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 360
           DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD
Sbjct: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 358

Query: 361 RFKSLEKRGIIAPTAKSRRK 372
           RFKSLEKRGIIAPTAKSRRK
Sbjct: 361 RFKSLEKRGIIAPTAKSRRK 358

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy TrEMBL
Match: A0A6J1JS50 (Ribosome biogenesis protein NOP53 OS=Cucurbita maxima OX=3661 GN=LOC111488412 PE=3 SV=1)

HSP 1 Score: 588 bits (1517), Expect = 5.95e-210
Identity = 332/380 (87.37%), Postives = 335/380 (88.16%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KD------LSLVALIIIISLFFCIDLSV 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD      LS V    +  +    DLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLDL 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKK EEASTVKEASQDGAKVG+LDL
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDL 120

Query: 121 WDDKGEVRSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180
           WDDK E RSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG
Sbjct: 121 WDDKDEARSKISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNELG 180

Query: 181 PAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGIEQ 240
           PAPVPLTVPGE ISEEDMLFLDADNNTDDETNLDEMDQDENNELEKR             
Sbjct: 181 PAPVPLTVPGEAISEEDMLFLDADNNTDDETNLDEMDQDENNELEKR------------- 240

Query: 241 ILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300
                    PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE
Sbjct: 241 ---------PLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKE 300

Query: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 360
           DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD
Sbjct: 301 DEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKD 358

Query: 361 RFKSLEKRGIIAPTAKSRRK 372
           RFKSLEKRGIIAPTAKSRRK
Sbjct: 361 RFKSLEKRGIIAPTAKSRRK 358

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy TrEMBL
Match: A0A1S3C5J4 (Ribosome biogenesis protein NOP53 OS=Cucumis melo OX=3656 GN=LOC103496720 PE=3 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 1.26e-188
Identity = 309/382 (80.89%), Postives = 328/382 (85.86%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KDL----SLVALIIIISLFFCI---DLS 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD     SL AL    SLF      DLS
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSD-SLFVVDKSRDLS 60

Query: 61  VKRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLD 120
           VKRKIEKKR++VLYCDSILTKNPFVQAVPSSVNKKSKKK +EAS+V++ SQ+G KVGMLD
Sbjct: 61  VKRKIEKKRDRVLYCDSILTKNPFVQAVPSSVNKKSKKKPKEASSVRDISQEGPKVGMLD 120

Query: 121 LWDDKGEVRSK-ISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNE 180
           LWDD+GEVRSK  SK  KPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVA+EMQKVYRNE
Sbjct: 121 LWDDEGEVRSKKTSKISKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRNE 180

Query: 181 LGPAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGI 240
           LGPAPVPLTVPGE ISEEDMLFLDAD NTD ETNLDEMDQDE+NELEKR           
Sbjct: 181 LGPAPVPLTVPGEVISEEDMLFLDADINTDGETNLDEMDQDEDNELEKR----------- 240

Query: 241 EQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIA 300
                      PLKMRRVTRVE NKRAR KE+ +KEAEAKKL+GISK+IDSLPDIIQEIA
Sbjct: 241 -----------PLKMRRVTRVEMNKRARQKEKVRKEAEAKKLEGISKEIDSLPDIIQEIA 300

Query: 301 KEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 360
           KEDEER+ RR+RRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV
Sbjct: 301 KEDEERENRRIRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 359

Query: 361 KDRFKSLEKRGIIAPTAKSRRK 372
           +DR+KSLEKRGIIAPTAK+RRK
Sbjct: 361 RDRYKSLEKRGIIAPTAKTRRK 359

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy TrEMBL
Match: A0A0A0KP89 (Ribosome biogenesis protein NOP53 OS=Cucumis sativus OX=3659 GN=Csa_5G218800 PE=3 SV=1)

HSP 1 Score: 533 bits (1373), Expect = 5.13e-188
Identity = 307/382 (80.37%), Postives = 326/382 (85.34%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KDL----SLVALIIIISLFFCI---DLS 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD     SL AL    SLF      DLS
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSD-SLFVVDKSQDLS 60

Query: 61  VKRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLD 120
           VKRKIEKKR+KVLYCDS+LTKNPFVQAVPSSVNKKSKKK +EAS+VK+  Q+  KVGMLD
Sbjct: 61  VKRKIEKKRDKVLYCDSVLTKNPFVQAVPSSVNKKSKKKPKEASSVKDIFQEDPKVGMLD 120

Query: 121 LWDDKGEVRSK-ISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNE 180
           LW D+GEVRSK  SKK KPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVA+EMQKVYR E
Sbjct: 121 LWGDEGEVRSKKTSKKSKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRKE 180

Query: 181 LGPAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGI 240
           L PAPVPLTVPGE ISEEDMLFLDAD NTDDETNLDEMDQDE+NELEKR           
Sbjct: 181 LAPAPVPLTVPGEVISEEDMLFLDADINTDDETNLDEMDQDEDNELEKR----------- 240

Query: 241 EQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIA 300
                      PLKMRRVTRVE NKRARHKE+ +KEAEAKK++G+SK+IDSLPDIIQEIA
Sbjct: 241 -----------PLKMRRVTRVELNKRARHKEKVRKEAEAKKVEGVSKEIDSLPDIIQEIA 300

Query: 301 KEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 360
           KEDEERD RR+RRTIAKQE+LKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV
Sbjct: 301 KEDEERDNRRIRRTIAKQEKLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 359

Query: 361 KDRFKSLEKRGIIAPTAKSRRK 372
           +DR+KSLEKRGIIAPTAKSRRK
Sbjct: 361 RDRYKSLEKRGIIAPTAKSRRK 359

[Close]

BLAST of Cp4.1LG01g11690 vs. ExPASy TrEMBL
Match: A0A5D3DQ80 (Ribosome biogenesis protein NOP53 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00340 PE=3 SV=1)

HSP 1 Score: 533 bits (1373), Expect = 3.95e-186
Identity = 308/381 (80.84%), Postives = 327/381 (85.83%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEK--KDL----SLVALIIIISLFFCI---DLS 60
           MGKKSKGSRKGKKAWRANISTAEIEDFFEK  KD     SL AL    SLF      DLS
Sbjct: 103 MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSD-SLFVVDKSRDLS 162

Query: 61  VKRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVGMLD 120
           VKRKIEKKR++VLYCDSILTKNPFVQAVPSSVNKKSKKK +EAS+V++ SQ+G KVGMLD
Sbjct: 163 VKRKIEKKRDRVLYCDSILTKNPFVQAVPSSVNKKSKKKPKEASSVRDISQEGPKVGMLD 222

Query: 121 LWDDKGEVRSK-ISKKPKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNE 180
           LWDD+GEVRSK  SK  KPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVA+EMQKVYRNE
Sbjct: 223 LWDDEGEVRSKKTSKISKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRNE 282

Query: 181 LGPAPVPLTVPGEPISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRLMFFIGIGIGI 240
           LGPAPVPLTVPGE ISEEDMLFLDAD NTD ETNLDEMDQDE+NELEKR           
Sbjct: 283 LGPAPVPLTVPGEVISEEDMLFLDADINTDGETNLDEMDQDEDNELEKR----------- 342

Query: 241 EQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIA 300
                      PLKMRRVTRVE NKRAR KE+ +KEAEAKKL+GISK+IDSLPDIIQEIA
Sbjct: 343 -----------PLKMRRVTRVEMNKRARQKEKVRKEAEAKKLEGISKEIDSLPDIIQEIA 402

Query: 301 KEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 360
           KEDEER+ RR+RRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV
Sbjct: 403 KEDEERENRRIRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 460

Query: 361 KDRFKSLEKRGIIAPTAKSRR 371
           +DR+KSLEKRGIIAPTAK+RR
Sbjct: 463 RDRYKSLEKRGIIAPTAKTRR 460

[Close]

BLAST of Cp4.1LG01g11690 vs. TAIR 10
Match: AT2G40430.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumour suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687). )

HSP 1 Score: 315.1 bits (806), Expect = 7.6e-86
Identity = 211/440 (47.95%), Postives = 263/440 (59.77%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKK--------DLSLVALIIIISLFFCIDLSV 60
           MGK+SK SRKGKKAWRANIS+ +IEDFFEK         +LS      +  +    DL V
Sbjct: 1   MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVG---- 120
           KRKIEK RE+VL  DSIL KNPFVQ VPSS  K  K K+      K   Q    VG    
Sbjct: 61  KRKIEKHRERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSV 120

Query: 121 MLDLW--DDKGEVRSKISKKPK-PSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQK 180
           M DLW  D KGE  S   K  K PSII AVE+E PGCS+NP+ ESHQD+LA+AVA+EMQK
Sbjct: 121 MADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQK 180

Query: 181 VYRNELGPAPVPLTVPGEPISEEDMLFLDADNNTDDE----------------------- 240
           VY+ ELGPAPVPLT+ G+ +SE++  FLD DN ++ E                       
Sbjct: 181 VYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQ 240

Query: 241 ------TNLDEMDQDENNELEKR-----------------LMFFIGIG-IG-------IE 300
                 TNL +++     + +K                  L +F+ +G +G       ++
Sbjct: 241 LKPSSNTNLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKDLKYFLEVGNVGEGEDNKDVK 300

Query: 301 QILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAK 360
             +         K +RVTRVE NKR R K   KKE + K  + I  +IDSLP+I++EIAK
Sbjct: 301 IEVSEAGNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIAK 360

Query: 361 EDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVK 372
           EDE++  + +RR IAKQE LK  PPRLGK+KFE  PVQVLL+EE+TGSLRKLK CCTL +
Sbjct: 361 EDEDKQNKHLRRVIAKQEVLKIRPPRLGKYKFEAPPVQVLLTEEMTGSLRKLKACCTLAR 420

[Close]

BLAST of Cp4.1LG01g11690 vs. TAIR 10
Match: AT2G40430.1 (CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 709 Blast hits to 643 proteins in 201 species: Archae - 0; Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). )

HSP 1 Score: 314.7 bits (805), Expect = 1.0e-85
Identity = 210/441 (47.62%), Postives = 265/441 (60.09%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKK--------DLSLVALIIIISLFFCIDLSV 60
           MGK+SK SRKGKKAWRANIS+ +IEDFFEK         +LS      +  +    DL V
Sbjct: 1   MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVG---- 120
           KRKIEK RE+VL  DSIL KNPFVQ VPSS  K  K K+      K   Q    VG    
Sbjct: 61  KRKIEKHRERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSV 120

Query: 121 MLDLW--DDKGEVRSKISKKPK-PSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQK 180
           M DLW  D KGE  S   K  K PSII AVE+E PGCS+NP+ ESHQD+LA+AVA+EMQK
Sbjct: 121 MADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQK 180

Query: 181 VYRNELGPAPVPLTVPGEPISEEDMLFLDADNNTDDE----------------------- 240
           VY+ ELGPAPVPLT+ G+ +SE++  FLD DN ++ E                       
Sbjct: 181 VYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQ 240

Query: 241 ------TNLDEMDQDE------------------NNELEKRLMFFIGIG-IG-------I 300
                 TNL +++                      +++++ L +F+ +G +G       +
Sbjct: 241 LKPSSNTNLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDV 300

Query: 301 EQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIA 360
           +  +         K +RVTRVE NKR R K   KKE + K  + I  +IDSLP+I++EIA
Sbjct: 301 KIEVSEAGNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIA 360

Query: 361 KEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 372
           KEDE++  + +RR IAKQE LK  PPRLGK+KFE  PVQVLL+EE+TGSLRKLK CCTL 
Sbjct: 361 KEDEDKQNKHLRRVIAKQEVLKIRPPRLGKYKFEAPPVQVLLTEEMTGSLRKLKACCTLA 420

[Close]

BLAST of Cp4.1LG01g11690 vs. TAIR 10
Match: AT2G40430.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 706 Blast hits to 639 proteins in 197 species: Archae - 0; Bacteria - 32; Metazoa - 228; Fungi - 147; Plants - 47; Viruses - 0; Other Eukaryotes - 252 (source: NCBI BLink). )

HSP 1 Score: 314.7 bits (805), Expect = 1.0e-85
Identity = 210/441 (47.62%), Postives = 265/441 (60.09%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKK--------DLSLVALIIIISLFFCIDLSV 60
           MGK+SK SRKGKKAWRANIS+ +IEDFFEK         +LS      +  +    DL V
Sbjct: 1   MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKQEEASTVKEASQDGAKVG---- 120
           KRKIEK RE+VL  DSIL KNPFVQ VPSS  K  K K+      K   Q    VG    
Sbjct: 61  KRKIEKHRERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSV 120

Query: 121 MLDLW--DDKGEVRSKISKKPK-PSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQK 180
           M DLW  D KGE  S   K  K PSII AVE+E PGCS+NP+ ESHQD+LA+AVA+EMQK
Sbjct: 121 MADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQK 180

Query: 181 VYRNELGPAPVPLTVPGEPISEEDMLFLDADNNTDDE----------------------- 240
           VY+ ELGPAPVPLT+ G+ +SE++  FLD DN ++ E                       
Sbjct: 181 VYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQ 240

Query: 241 ------TNLDEMDQDE------------------NNELEKRLMFFIGIG-IG-------I 300
                 TNL +++                      +++++ L +F+ +G +G       +
Sbjct: 241 LKPSSNTNLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDV 300

Query: 301 EQILPTYAFQSPLKMRRVTRVEFNKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIA 360
           +  +         K +RVTRVE NKR R K   KKE + K  + I  +IDSLP+I++EIA
Sbjct: 301 KIEVSEAGNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIA 360

Query: 361 KEDEERDKRRMRRTIAKQERLKSCPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLV 372
           KEDE++  + +RR IAKQE LK  PPRLGK+KFE  PVQVLL+EE+TGSLRKLK CCTL 
Sbjct: 361 KEDEDKQNKHLRRVIAKQEVLKIRPPRLGKYKFEAPPVQVLLTEEMTGSLRKLKACCTLA 420

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g11690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22892	1.4e-84	47.62	Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana OX=3702 GN=At2g40430 P...	[more]
Q8BK35	1.7e-13	27.76	Ribosome biogenesis protein NOP53 OS=Mus musculus OX=10090 GN=Nop53 PE=1 SV=1	[more]
Q9W3C2	2.1e-11	26.63	Ribosome biogenesis protein NOP53 OS=Drosophila melanogaster OX=7227 GN=CG1785 P...	[more]
Q9NZM5	9.6e-09	24.49	Ribosome biogenesis protein NOP53 OS=Homo sapiens OX=9606 GN=NOP53 PE=1 SV=2	[more]
Q9UUI4	2.1e-08	24.40	Ribosome biogenesis protein NOP53 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Cp4.1LG01g11690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547341.1	1.09e-227	93.07	ribosome biogenesis protein NOP53-like [Cucurbita pepo subsp. pepo]	[more]
KAG7031528.1	1.27e-210	87.37	hypothetical protein SDJN02_05568, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022942752.1	4.29e-210	87.37	ribosome biogenesis protein NOP53-like [Cucurbita moschata] >KAG6600893.1 Riboso...	[more]
XP_022991921.1	1.23e-209	87.37	ribosome biogenesis protein NOP53-like [Cucurbita maxima]	[more]
XP_038878460.1	3.52e-193	82.46	ribosome biogenesis protein NOP53 [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g11690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FR54	2.08e-210	87.37	Ribosome biogenesis protein NOP53 OS=Cucurbita moschata OX=3662 GN=LOC111447694 ...	[more]
A0A6J1JS50	5.95e-210	87.37	Ribosome biogenesis protein NOP53 OS=Cucurbita maxima OX=3661 GN=LOC111488412 PE...	[more]
A0A1S3C5J4	1.26e-188	80.89	Ribosome biogenesis protein NOP53 OS=Cucumis melo OX=3656 GN=LOC103496720 PE=3 S...	[more]
A0A0A0KP89	5.13e-188	80.37	Ribosome biogenesis protein NOP53 OS=Cucumis sativus OX=3659 GN=Csa_5G218800 PE=...	[more]
A0A5D3DQ80	3.95e-186	80.84	Ribosome biogenesis protein NOP53 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cp4.1LG01g11690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40430.3	7.6e-86	47.95	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G40430.1	1.0e-85	47.62	CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor pro...	[more]
AT2G40430.2	1.0e-85	47.62	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 291..311
None	No IPR available	COILS	Coil	Coil	coord: 250..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..99
IPR011687	Ribosome biogenesis protein Nop53/GLTSCR2	PIRSF	PIRSF017302	Gltscr2	coord: 70..372 e-value: 4.8E-38 score: 129.2 coord: 1..108 e-value: 0.082 score: 9.7
IPR011687	Ribosome biogenesis protein Nop53/GLTSCR2	PFAM	PF07767	Nop53	coord: 8..357 e-value: 9.2E-52 score: 176.7
IPR011687	Ribosome biogenesis protein Nop53/GLTSCR2	PANTHER	PTHR14211	GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2	coord: 1..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g11690.1	Cp4.1LG01g11690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0008097	5S rRNA binding